Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCCTAGAGTGTATGGGTTGTAATCTATATCCACATAATCACATGATGAGCTTGCATTGGATTTGTATAAGCAGCTATAGGGGGGTTGCATTAATTGGTTATTCTGATGTATTGTAATATATTGAATCCGAGGGTAAAGTTTCCTGCTTGCCTATATTACCTGATTTAAATGGGTTTCTGCCTTCCTTTTTCTTGCATCCTTTCCTTCTCACATAATCTCATTCATGTTGCAAAAGGTCTTGTATGCACAAGTTGTACAATAAATTTATTATACACCGACATATTTTTACCCAATTTTTTCTACTTTTATCCAGTTTTCTCCAACTTTTATATTATTATTAAAAAGAGGTTGATTGATAAACATTTTAAAGGGTTAAATGATTAATTTATACATTATTAGTAATTTTGAAGAAATATTTTTTATTAAATTGAAAAATTTTATCATTAAAAAATAGGTAACTTTTACATATATAAGGGTAACCTTTAAACATTTTACGTTAACTTTAATTTTGGTGTACAATATTTATCGTACACCCCATGTAAATAAGAATTTGTGTTCATGTTGTTGTTCAGAAAGGAAAGGAAATGAACTAAATTAAACTTCCTCCGCTCCTAACCTATTCCTTTTTGGACGTCCCTGTTTGTTTGCCTTATATTTTAGGAAAATTTGTAATTATTAATCCAACATTTGCCCGATTTTCTTTAATTCCCTATGCAATATTTCTAAATAATCCAACCTTTATGACCTAACTACTATTATTAAGCCTGGATGACCGGTTACCTGCTACAAAGTCAAGGAAAATTTGTAATTATTAATCCAACTTTTGCCCGATTTTCTTTAATTAAGTCTACCTATGCGATATTTCTAAATAATCCAACCTTTGTGACCCAACTACTATTATTAAGCTTAGATGACCGGTTATCTGCTACAAAGTCAACGTTAAAAACGTTGACAACCTAAAGTTGGTTTCCCTCCTAAAATATTGGACACGTCATCATCACTTGCCACCTAAACAAGGATTTCATTTTTTTTTCAAAAACCCTTAACCCTTCTCTTCTCTGTACCGTGTTTCAATTCCTCTTTCCTCCATTACTGTTGCTTCAACCACAATTGTACTGGTTCATGACATCATCAACGATTTTTTTGTGGAAATAGGTGACTTCATCCACGCGCATTCAAATTTCGTCTCCAAAAAATATAATTGTTATATGCCACGTAAGGGTGAATACCGCCTATAGCAGGTTAGTAACTTGTTAGGCTTAATAATAGTAGTTGGGTCATAAAGGTTGGATTATTTAGAAATATCACATAGGTAGACTTAATTAAAGAAAATCGGGCAAATGTTGGATTAATAATTACAAATTTTCCTATATTTTATTTAGTAACTTTTCCCCCTTGCTCTCTCTATCTCTCCTCAAGGACCTACCTTACCAACTCGTACACCAAAAATTAATAATGTAAAAACTTTGCTTTATGGAGCAATTTCTTAGGGACGAAGTGAGTAGTTGCGACAAAGTCACACCTACAATATTGTCATCTACGGTATAGAAGGAAAATAAAACCTTTAAACTTTCATCGGCACAACTTACGTTGAATTATTTGACACTTGTCAACACTTTTTTGTTACAAAATATTACTTCATATGTTCCTAAAGATTGTCCCATAATCAAAATTCACTTTATTAAGAATTAGGGTAAAATGTGCACATGATTTGATAATCATGATCAGAGAGAAAACGAATGAGAAATTTTATCATTAATGAGACAAACTTTAAGAGACGCAAATAAAATACAAAAGGTCTTGCATGCACAAGGTGCACAATAAATTTATTGTGCACCAACATAACTTTTACCCAATTTTCTCTAACTTTTACTCAGTTTTCTATAACTTTTATATTATTAAAATAAATTAATATATAAACATTTTAAAGTGTTAAATGATTAATTTTATACATTATTAGTGATTTCGAAGAAATATATTTTATTAAAATGAAAAAATTAATTACTTAAAAGTAGATAACTTTTACATATAAGGGTAACTTTTAAGCATTTTACGTCAACTTTAAATTCGGTGTATAATATTTATCGTACACCCCATGTAAATAAGAATTTGTGAATAAAATATGAGTAATCTTTTACGGACGGAGTGATCAGTATAGATTTTTTACTTTTTTTTTTTTAGAGAAAAAGGGATTAGTATAGATTATCTTCGATAATTTTCCTAATTATTCCCAAAACAAAGCAAGATCACAAAATCTTTCTTGTAAATAATGTAATTAATCTGTGGGTCCACCAGGTGTTTCGTGCTAGTCTCTTATCTAAACACAACAATAGTTCGTTCACATCCACTTTGTTGTTGGACTTGTTATTCGAAACTATCAGCTCAGCTGTTGTCAACTTCATTTTGATTCATTATATAATAACATTAATTACTCATCAAATAAAATTACCAAAAGAAAAAGAGATGGAGAGCCAAAACGAAGACAACAGATCATCAATGGTGTCCAAGGTGGAATCTAAGGATCAATGGGAATTTCTTGTCAACAAAGCCCAACAACAGAATTCCCCTGTAAGTTCATTTCTTTTTTGTCAACAAAGCCAAACAACAATCTTATACTACTACTGTGTTGTCAATTTACAGTTTAAATTATTATGTTCGGATTTAGTTATCACATTATTACTAGTTCAAATCCGGATAGAGGGATTATTTTCTTTATGCTGATGATTAGTTTTCCAAAAATCAAATATTTTTAATCATCATGGCTTAATGGGTAATGAAATAATTTGGGGTTTTGATATTTTCTTTGATTGATTTTTGGGTGTAATTTTAGAGGCAATTCATTTATCCAACCTCAGATTGATGACAATCAAATGGTATTATGGTAAATGGTTTTGGTAATTTATTTCAATTAATTTGGTTTTTGGTAATATATTGATGTTTCTATCATGTTATGCAGATTGTGGTTCACTTTGGAGCTTCATGGTGCATTCCATCAGTTGCAATGAATTCATTGTTTGAAGAATTGGCTTCAGATTACTCTGATGTTATGTTTATCAATGTTGATGTCGATGATGTCAAGGTAATATCTTTACCTTTGAAAAATGTCCCGGTTTTGTTGATTTGTTGTGGATTGATTTGTATAAAATGAAATGGTGAAATTTGATTGTATGATTTACCATATGGCATATTGGATGATGGAGTAGTGTTTTGTGCTAAAATTATTTACTGACCCCCAAAGAAATGGCGAAAAATGCCCTGGTTTTGTTGATTTCTGTGGAAATTTGATGGATCTTTAGAGGAAGAAATGATGAAATCGGATGGATTTTTAATGTCTTGTGCTAAAAATTATTTACTGACCCCTAAAGAAATGGCTAAATTTGGCATGTCAAATTTGATGAATATGATGTATTGGATTGTATTTTGATTCTCTTAATTACTCATTTTATGGTAATGTCAGTTAGGAAATTGTTGTTCTTGGGTAGAAGGTATGTGTGTAATGAGTAACTTAGTCCGGTTTTGGTCAAATTTTTGGTTGGGTGATAATAGGGCCTATCGTCAGTTGTTGTGTATTAGGGAGTATGAAACAGTTAATCATTGTCATTTTTAGTAAGTTTATACCCGGGTTGGTTTGTGTCCAATTCCGGTTGAATTCATTAGAGAGAATCTAATAAAGGCGAATTCTTCTTGTAACGAAAATAAAACCATGTCTCATGAAATGAAACTGGCTGGAAGTGGCTGGCTGACTGACTGCTTCTAGTCCCAAGTCCCTAACTTAAGTGTCATGTTAGGCTAGAGCTGTAAAAAACTGACCCGACTCAAAACCCGGACCTAAACCGACCGAAGCCGTAACCGACTATGACCCGAAATTTTGGTAAAACAGGTAATCCGAAACCCGATCCGTACCCGACCCGTAAAAACCGATAATCGATTTTGACCCGACGTTGTATGCCCCGAACCCAAAGTCGACACCCAACCGAAAGATAACCGATAGCCGAACTGATCCGACTGAATAATGATCCGAGCCCGATTCGATACCCGACAATGACCTTAACCCGATTTTTACCACATAACCTGTTATGACTTGACTTGTAGAGTAAATATGTTACGCTTGAATATTTTAAGATGACTAAATCAGATATTGAGACGATCTTAATCCGTGTCCGAGAGTGAATCCGGCTTGAATTTGAATCGACCCAAAAATTATCTGATCCGAACTTGACCCAATTCCAGATATTAACCGACTCAAACCCGACTATATAAGACCCAAACCCGAAATTGAACCCGACCCAAACATGACTCGACTCGAACCCGACTTGTACCCGAAATGGGAAAAAACCCGACATGACCCAACCGAATACCAACCCAACCTGCACCCGAGTGATAAAGTGACCCAACACAACCTGACCTGATCATTACCCGAGACCCGAGATGACCCGGACCCGACCCGATGACCTGTTTTGACAGCTCCATGTTAGGCACTACGGATTATTACACTGGAATTTGCTTATCTATGGCATTCATAACGCCTTTTTTTAAAGTTGATTAGTCAAGATTGTGAATAATGCTTAAGAGTACCTGATTGTGATTTTGATATTTTGTATGTTTGATATGCTAGCAGTGGTAGTATATATGCTAAAATCTCAATATTTAGTTTGCAACTGAACAAAAACTGGTTGATCAGTCTGTATATTTATCAAGCTTGCACATGTTGTTTTTGGTGTTTCAATTTCAGGAAGTTGCTTCAAAGATGGAAGTGAAAGCTATGCCAACCTTTTTACTGATGAAGAATGGCAGTGTAGTTGACAAGCTAGTTGGAGCGAACCCGGATGAGATAAGGAAAAGGGTCGGAAGTTTTATTCAGACCAATGGTGGCGGTGCATATATGGCCTAGTCTTTTTGTGTGTTTCATGTTGTACATTTTGTGTGCTGTCTAACAGCTCTATATATGTTAAAAACAAATACATCAATGTATGGCCATATGGGTATGTAAGATTAACTTGTTAATTACTACGAGTACATGTGTTTATGTTTGCCAACATTTTTACTGATGATCTGCTTTGTTTATTTGAATTATCTTGGCTTGAATCATAGTTTTTGGATTGAAGATTTTGGCTGTCAAGCTGTTAGT ATGTTCCTAGAGTGTATGGGTTGTAATCTATATCCACATAATCACATGATGAGCTTGCATTGGATTTGTATAAGCAGCTATAGGGGGGTTGCATTAATTGGTTATTCTGATGTATTCTCAGCTGTTGTCAACTTCATTTTGATTCATTATATAATAACATTAATTACTCATCAAATAAAATTACCAAAAGAAAAAGAGATGGAGAGCCAAAACGAAGACAACAGATCATCAATGGTGTCCAAGGTGGAATCTAAGGATCAATGGGAATTTCTTGTCAACAAAGCCCAACAACAGAATTCCCCTATTGTGGTTCACTTTGGAGCTTCATGGTGCATTCCATCAGTTGCAATGAATTCATTGTTTGAAGAATTGGCTTCAGATTACTCTGATGTTATGTTTATCAATGTTGATGTCGATGATGTCAAGGAAGTTGCTTCAAAGATGGAAGTGAAAGCTATGCCAACCTTTTTACTGATGAAGAATGGCAGTGTAGTTGACAAGCTAGTTGGAGCGAACCCGGATGAGATAAGGAAAAGGGTCGGAAGTTTTATTCAGACCAATGGTGGCGGTGCATATATGGCCTAGTCTTTTTGTGTGTTTCATGTTGTACATTTTGTGTGCTGTCTAACAGCTCTATATATGTTAAAAACAAATACATCAATGTATGGCCATATGGGTATGTAAGATTAACTTGTTAATTACTACGAGTACATGTGTTTATGTTTGCCAACATTTTTACTGATGATCTGCTTTGTTTATTTGAATTATCTTGGCTTGAATCATAGTTTTTGGATTGAAGATTTTGGCTGTCAAGCTGTTAGT ATGTTCCTAGAGTGTATGGGTTGTAATCTATATCCACATAATCACATGATGAGCTTGCATTGGATTTGTATAAGCAGCTATAGGGGGGTTGCATTAATTGGTTATTCTGATGTATTCTCAGCTGTTGTCAACTTCATTTTGATTCATTATATAATAACATTAATTACTCATCAAATAAAATTACCAAAAGAAAAAGAGATGGAGAGCCAAAACGAAGACAACAGATCATCAATGGTGTCCAAGGTGGAATCTAAGGATCAATGGGAATTTCTTGTCAACAAAGCCCAACAACAGAATTCCCCTATTGTGGTTCACTTTGGAGCTTCATGGTGCATTCCATCAGTTGCAATGAATTCATTGTTTGAAGAATTGGCTTCAGATTACTCTGATGTTATGTTTATCAATGTTGATGTCGATGATGTCAAGGAAGTTGCTTCAAAGATGGAAGTGAAAGCTATGCCAACCTTTTTACTGATGAAGAATGGCAGTGTAGTTGACAAGCTAGTTGGAGCGAACCCGGATGAGATAAGGAAAAGGGTCGGAAGTTTTATTCAGACCAATGGTGGCGGTGCATATATGGCCTAG MFLECMGCNLYPHNHMMSLHWICISSYRGVALIGYSDVFSAVVNFILIHYIITLITHQIKLPKEKEMESQNEDNRSSMVSKVESKDQWEFLVNKAQQQNSPIVVHFGASWCIPSVAMNSLFEELASDYSDVMFINVDVDDVKEVASKMEVKAMPTFLLMKNGSVVDKLVGANPDEIRKRVGSFIQTNGGGAYMA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo13583.1 vs. NCBI nr
Match: gi|902125803|gb|KNA04080.1| (hypothetical protein SOVF_202990 [Spinacia oleracea]) HSP 1 Score: 186.0 bits (471), Expect = 6.100e-44 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of Spo13583.1 vs. NCBI nr
Match: gi|731351242|ref|XP_010686937.1| (PREDICTED: thioredoxin-like protein CXXS1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 181.4 bits (459), Expect = 1.500e-42 Identity = 98/128 (76.56%), Postives = 107/128 (83.59%), Query Frame = 1
BLAST of Spo13583.1 vs. NCBI nr
Match: gi|590625556|ref|XP_007025916.1| (C-terminal cysteine residue is changed to a serine 1 [Theobroma cacao]) HSP 1 Score: 162.2 bits (409), Expect = 9.400e-37 Identity = 77/120 (64.17%), Postives = 99/120 (82.50%), Query Frame = 1
BLAST of Spo13583.1 vs. NCBI nr
Match: gi|567913647|ref|XP_006449137.1| (hypothetical protein CICLE_v10017174mg [Citrus clementina]) HSP 1 Score: 161.0 bits (406), Expect = 2.100e-36 Identity = 79/121 (65.29%), Postives = 100/121 (82.64%), Query Frame = 1
BLAST of Spo13583.1 vs. NCBI nr
Match: gi|802779811|ref|XP_012091425.1| (PREDICTED: thioredoxin-like protein CXXS1 [Jatropha curcas]) HSP 1 Score: 159.5 bits (402), Expect = 6.100e-36 Identity = 79/120 (65.83%), Postives = 95/120 (79.17%), Query Frame = 1
BLAST of Spo13583.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q9Y7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_202990 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 4.200e-44 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of Spo13583.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ELT9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g186730 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.000e-42 Identity = 98/128 (76.56%), Postives = 107/128 (83.59%), Query Frame = 1
BLAST of Spo13583.1 vs. UniProtKB/TrEMBL
Match: A0A061GGI1_THECC (C-terminal cysteine residue is changed to a serine 1 OS=Theobroma cacao GN=TCM_030081 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 6.500e-37 Identity = 77/120 (64.17%), Postives = 99/120 (82.50%), Query Frame = 1
BLAST of Spo13583.1 vs. UniProtKB/TrEMBL
Match: V4U8T6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017174mg PE=4 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 1.500e-36 Identity = 79/121 (65.29%), Postives = 100/121 (82.64%), Query Frame = 1
BLAST of Spo13583.1 vs. UniProtKB/TrEMBL
Match: A0A067G7L1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032978mg PE=4 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 1.500e-36 Identity = 79/121 (65.29%), Postives = 100/121 (82.64%), Query Frame = 1
BLAST of Spo13583.1 vs. ExPASy Swiss-Prot
Match: CXXS1_ARATH (Thioredoxin-like protein CXXS1 OS=Arabidopsis thaliana GN=CXXS1 PE=2 SV=2) HSP 1 Score: 149.1 bits (375), Expect = 5.100e-35 Identity = 69/109 (63.30%), Postives = 89/109 (81.65%), Query Frame = 1
BLAST of Spo13583.1 vs. ExPASy Swiss-Prot
Match: CXXS1_ORYSJ (Thioredoxin-like protein CXXS1 OS=Oryza sativa subsp. japonica GN=Os04g0629500 PE=2 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 9.400e-29 Identity = 58/113 (51.33%), Postives = 85/113 (75.22%), Query Frame = 1
BLAST of Spo13583.1 vs. ExPASy Swiss-Prot
Match: TRH41_ORYSJ (Thioredoxin H4-1 OS=Oryza sativa subsp. japonica GN=Os01g0168200 PE=2 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 4.800e-17 Identity = 39/120 (32.50%), Postives = 70/120 (58.33%), Query Frame = 1
BLAST of Spo13583.1 vs. ExPASy Swiss-Prot
Match: TRH21_ORYSJ (Thioredoxin H2-1 OS=Oryza sativa subsp. japonica GN=Os07g0190800 PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 6.300e-17 Identity = 46/127 (36.22%), Postives = 73/127 (57.48%), Query Frame = 1
BLAST of Spo13583.1 vs. ExPASy Swiss-Prot
Match: TRH42_ORYSJ (Thioredoxin H4-2 OS=Oryza sativa subsp. japonica GN=Os05g0169000 PE=2 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 8.300e-17 Identity = 40/116 (34.48%), Postives = 68/116 (58.62%), Query Frame = 1
BLAST of Spo13583.1 vs. TAIR (Arabidopsis)
Match: AT1G11530.1 (C-terminal cysteine residue is changed to a serine 1) HSP 1 Score: 149.1 bits (375), Expect = 2.900e-36 Identity = 69/109 (63.30%), Postives = 89/109 (81.65%), Query Frame = 1
BLAST of Spo13583.1 vs. TAIR (Arabidopsis)
Match: AT3G08710.1 (thioredoxin H-type 9) HSP 1 Score: 87.0 bits (214), Expect = 1.400e-17 Identity = 40/108 (37.04%), Postives = 67/108 (62.04%), Query Frame = 1
BLAST of Spo13583.1 vs. TAIR (Arabidopsis)
Match: AT5G39950.1 (thioredoxin 2) HSP 1 Score: 86.7 bits (213), Expect = 1.800e-17 Identity = 39/108 (36.11%), Postives = 66/108 (61.11%), Query Frame = 1
BLAST of Spo13583.1 vs. TAIR (Arabidopsis)
Match: AT1G19730.1 (Thioredoxin superfamily protein) HSP 1 Score: 85.9 bits (211), Expect = 3.000e-17 Identity = 41/98 (41.84%), Postives = 65/98 (66.33%), Query Frame = 1
BLAST of Spo13583.1 vs. TAIR (Arabidopsis)
Match: AT1G45145.1 (thioredoxin H-type 5) HSP 1 Score: 85.1 bits (209), Expect = 5.100e-17 Identity = 37/93 (39.78%), Postives = 62/93 (66.67%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo13583.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo13583.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo13583.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo13583.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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