Spo13547 (gene)

Overview
NameSpo13547
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr5 : 42221124 .. 42222699 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGATTGATGTTGGTTGGAGTTGAATGCGCCACAAAGATAGAAGCATATATGAAATCAGATTGGTATTCTCTTATCTCAATTCCTTACTTTCCTGTTATTCTTTCTCAATTGTGAATCTTCTGTTCTTCCTCCCTCTTTTTGCAGATACCTGAAAATTTTTGAGTGGTGCAGGAAGATAATGCGCATAAAGAGAATAACATCGTATTTTTAGATTTATATTTTTAAATGATAATTTTTTTTCTCATCTTAATAATTCGTCATTTACTTATTTTGATGTAAAGTCATGTCGTTCGACAATGAGATTTTTGAGAGGTACTAATTATGTAATGACTTAAATTATTTGTAGATACATTTTTTTTGGAGTTAATAATACCAATATTGATTTTCATGAAATACTTTTTTTTACTTTTACTATTCGATCATGATTACTTATAGGTTATCGTACTTGGAAATGTATGAAGTAAAATTGTGTAATTTGAAGCAAGATTATTTCTTATAGGTAACAGTGCATACAAATGTATGAAATAAATATGCTAGCTTTATTTTCGGTGCCTTTAAACACCTTTTATGACAATATCAGATTGCATCTAAATATCATTATTTAAAAATAAGATATTGACTCTAATTATATATAGAGGCATTAAATGGTTGCCCCAAAATATACGTCGTTTTAGAAACAACTGTTTATACGGCCTCTATTTATATTTCGAGGCAAAACCATATGATTGCCCCCGACTTTTTATTTTGTCTCTTATTATATTTTGAGGCAAAATTATATGGCTGCCCCTAAATATATAGTGTCTTTAGAATCAACTTTTAATATTGCCTCTAAATATATTTTGATGCAAGAATATATGTTAGCCTCTAATTATATTTTGGGACAAGAATATACGGATGCCTCTAATTATATTTCGAGGCAATAATATGTGGTTGCCTCTAATTATATTTTGAGGCAAAGATATATGATTGCCTCTAATTATATTTTGAGGCAAGTATAAATGGATGCCTCTAATTATATTTTGGGGCAATAGTATGTGGTTGCCTCTAATTATATTTAGAGGCAAGGATATATGGTTGCCTCTAAATGTATGGGATTTTAGAGGCAACACATTATGTTGCCTCGAAAAGGGGCCTTTAGAAGCAACCAGTAATTAGCGACAGACTTATTAGAGGCATCCACTTTTTTGCTTCAAAAACTCATTAGAGGCTAAATCCCCATTTTTAGAGGCAATTATGACTTGCCCCTGTATCCGATTTTTCTAGTAGTGTATACGTAGTGCAAAGTAATATGTTGATTTAAACTCAAAAGTTATTGCAAGGTTAAGTAAATATGAAACTCTTATAGAATCCTCTCCTTACTAGCCTAGTTTCTTAGGTGTTCTTCTGTTTTTCTTTCCTGTTGGTTGCAGACAGATTGCTTATGTTGCATCTGTTGCATCTGTTGCTGCTGCTTCACATTGGGGGGGATTTTTCTGTTTTGCGTTTCTGTTGAATGCAGGCAGATTACTTATGTCATCTGTTGCTGCTGTTTCATTTTTGGGTTGCAGTCTGTGCTTTCCTTTTGATGATTTGTAG

mRNA sequence

CTGATTGATGTTGGTTGGAGTTGAATGCGCCACAAAGATAGAAGCATATATGAAATCAGATTGATACCTGAAAATTTTTGAGTGGTGCAGGAAGATAATGCGCATAAAGAGAATAACATCACAGATTGCTTATGTTGCATCTGTTGCATCTGTTGCTGCTGCTTCACATTGGGGGGGATTTTTCTGTTTTGCGTTTCTGTTGAATGCAGGCAGATTACTTATGTCATCTGTTGCTGCTGTTTCATTTTTGGGTTGCAGTCTGTGCTTTCCTTTTGATGATTTGTAG

Coding sequence (CDS)

ATGCGCATAAAGAGAATAACATCACAGATTGCTTATGTTGCATCTGTTGCATCTGTTGCTGCTGCTTCACATTGGGGGGGATTTTTCTGTTTTGCGTTTCTGTTGAATGCAGGCAGATTACTTATGTCATCTGTTGCTGCTGTTTCATTTTTGGGTTGCAGTCTGTGCTTTCCTTTTGATGATTTGTAG

Protein sequence

MRIKRITSQIAYVASVASVAAASHWGGFFCFAFLLNAGRLLMSSVAAVSFLGCSLCFPFDDL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo13547.1Spo13547.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo13547.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo13547.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo13547.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo13547.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0001510 RNA methylation
biological_process GO:0006396 RNA processing
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0008171 O-methyltransferase activity
molecular_function GO:0008173 RNA methyltransferase activity
RNA-Seq Expression