Spo13539 (gene) | SpinachBase

Overview


Name	Spo13539
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Protein YIPF
Location	chr2 : 1222948 .. 1227837 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTACTTAAGAGAGAGAAAAGAAGAATGGAGAAACCAAAAATTATTCTTAAACAAAGATTTCATTTTATTGATTTTCATTTTCAATCTCTTTCCCTTTCCCCTTGTCCAACCAAACCGCTTCTAAATGTTCATTTAAAACTTAAAAGTCGGGTGCCCAATAAACATTTTGTAACCGGGTGAAACCATAGTTTGGGCAATCTCATCGTCCTACAATGCTCTTCTTCTCCGACAACCTCCTTCTTCCCCGCCATTGACATCTCTCTGTCTCTCTCTCTCCTTCTTCCTTCGCACCCCTTTCCCCCCCTTCTCTTCAGATCTAATCTTAACTCCCAAATTCAACCACCATCATCATCTTCATTGATCAACAACATCAATTGATAATCAAAATCAACAAAATCATCAAAAGAAAAAATGTCACACACAAATCCAAACAGCGACACAATTCCACTCCATTCCTCCTCCCAATCTGACATCGACGAGATCGAGAATCTCATACACTCCTCCATCCACTCTGCCCCTTCCACCGTTCTACCTGCCGCCCGGCCTCCTTCTCCTCCACGCGCCTCCATCCCCGTCTCCTCCTCCTCCAACTCAACAACACCATCTCCCTTTATCACCTCCAATCTCCCTCCTCCTTCCGCCCCACCTCCCTCCACCAAACCCCACTTCGTCCCCGCCGCCGCTGCACCTCCTCCTCTGCCGTCCTCCTCCACTGCTGGTATCGCTACTTCCGGGTTCGGATCTCCTCCTAACACGCTTACTGAACCTGTTTGGGATACTGTCAAACGAGATCTCTCCCGAATTGTTAGTAATCTGAAGCTGGTTGTGTTTCCCAATCCGTACAGAGAAGACCCCGGTAAGGCGCTTCGTGATTGGGATCTGTGGGGCCCCTTTTTCTTCATTGTCTTCCTTGGTCTTACACTTTCATGGTCTGCTTCAGTCAAGAAGGTAACCATCGTTATCCTTTTCTTTTACTTTTTGTATTGTTTTTGAGTTTTTGTTGCTGCATTTTGATGACTGCTAAGGGTGATTAATTGTTTCTGGGTTCGGGGGTTTGTTGGCTAAATGATTTTTAGAATGTGGTTGTTTGGAAAAAGTGATCAGACAATGCTCGAAGGTGATTAATTAGTAATTAGGAGTTGTTGTTGTTGGTAATTTGGTATTGCTAAACAATTTACATAGCTGTGCTTAGAATTCTGTTATGCCTTTGTTTCGGTGGGTGTGGTTGAAAGACGGTTTTATGGATGATGTATGAGGATGATAGTAGGTGGGAGGTAGATTTTTTATATGAGAATTCCTATGTTAATGCATATTCTAGCCGTGTATGGCATGTTTTGATTGAATGAGTTCTTTCAGCTGTAATGAGATAAATGTTGGTAATCATTTTTTTGTTTTTCTTTGTAGTGAATATGGGTTATTCTTGTTTATGGGGTTTCTTTGGTTGATTAATTTACTATAATCTGGTTGATTGATGGTGATTTTATTGATGATTAAGAAAAGTTATTGGGATGTAAAATAAAAACAACAGCAATAAATCTCAGAATCCCTGACATTGGTATGGTTAAGGATGGTTGTGTTGTTTTCATCTGTGAACTTGACATGCTGTTGTCAGAAGATTTTGTAGAGATGTACGCGGATGAAAGTAGGTGGGCACTTGAGATGTATGCCATGCATATTTTAGCCATATATGGCATGCTATAATCGACATATCACATATGTATCTTAGGTGCAATACAATAATTATGTTACCTGGACTTGGGATCTTCGTAACAAACTTGAGGATATCAGTATCTGTACAAGTGTATGCTGTTTTATGAAAATTTTAGATGTTTTTGGTTGAGAATGAAGTGTTGTAGTGTCCATAACGATATCCAACTCGAAGTGGCGAGGATCCAACATGGCTGCTTGAGGTTGAAGAGCCTGGAATCATAGAAGGAAAAGTATGCATGGTATTCTATACCTGTTCGCTCTGGAAAACATCTCACAAGTTCAATTCGGTGTTGGGCCTTGGGATTTCATTTGCAGTTGAGGTTTAATGTATAGCTGATAGTTCAGGTGACGTAGTCCAAATACTCCAGTTGATTTGATGAGAAAAAACTTAAGTTCTGGTTATATTACAGAGTATTATATCAACCTTTTGTTTCATGGAAATGCAATGTTTGAGAGTCACAATTCTTGTAGTATAATTCTTTTGATGAGTACAACTTTAAATTATCAAGAATTGAAGGGTTTTTTCGAGGGGTAAAGAGAAATTGGAGATCAGAAATTGCAGAAGTTGCTTATCCGTTTTGCTTGGGAAGATATACAAAACTGCATCAAGTTGCTTCAGGGGTATGAAATTCAACCAATGCAGCTCTTTAAGACATGCTGGATTCTTCCGAATAAGAAAGATAGGATAAAGGCAATCATTGCATGTCTTTCAAGTAAGATAATTGTATCTCCTAGAGTAAGAAAATATTCTACTTATTAGTTAACGTCGTTAGGGACATGGAGTGGAGGCTCAAAAAACGATGTTATTGAAATTTGCATGTATTTTGGTCATATCAATTGCCAATATCAAAAAGCACTTGCTTGGAGGATGGGAAGTTGGGATAATGAAGTTTTCATAAGAAATCGAGGTACACCCAAAGCAGACTTGAATGAAGGGGTAAAATAAGACATGATTCAATTTGGTCTCTAGGATCATAGTGCATTGGGTAGGGGTGAGTAGAGGACAAGGAATCATGTAAGTGGCTTATCAGATGACTTCGTTGTTCACGAAGCTGATTCCATTATAATGGGATTAAGGCTCTAAAATTATTAACGTTGTAGTCCTATAGTAAATATTGCTTCTAGATCAAAAGTTTAATGCAAATATCCTCTTTGCGATTGCAAGGGTAAGGCTGGTTGAACCTCTCTGCAGTTCTGTGGTGAATGATCTGTACATCTACCCTTCCCTCCCCCTACCCTGCCCTCCCCCTACCCTGCCCTAGAAACGATTCCTGTTGGAGACATGGTGTTTTTGGGTATAATGTACGGTATCGTATGATAATTAGAGACTTAGACATATGTTATCACTCTAATTTCTAGAGAAGATAGTATGAAGAGAAGTGGGAGGGATTATTCTTAAGCTTGTCTAGAAGTTCATACATATTTGTAAGGCTGAAACTTGTGTCTTCCAGCTCAACAGGAAAATCAGATGAAAATAAATTCTCTGCTACCGTCTTCAGTTTTATTCATCCATGTGAATGCTTTCCTTCTTTACAATGAACATCATTCTGCTCTACAAATCTGTTTCGTGGTGCATAACCTTGCATCATGTTGAGTTAACTTAGAGTAGTTGGTTACAAGAGAAGAAGTGCAAGCATTTGGTATCTTTGGATAGATTACTTTCCTTGATTCCTTGGTCTGTTGACAGGAACCTTACTAGTCAAGTGATGATCTTCTATGCTCCAAACTTAAAATCTAACAAGGTTCGAACATATTGTAAATTTTCCAAATTAGGTTCCTGTTTGAGTTTAGGATGCTTACAGATGGTCATTTCTGACTAAAATATTTTCTGTTTTGTATTTAGCCTTTAGTTCTGAAATCTCCGTCTCTTGATCACCTTGTACTTCTATTTTTTATGTTGTGATCTCATAATGTTTTGAAAGAGTATGTTATGTACTTGATGGTATGACTGCGTTGTTTTCTTTCCCCTTTAGTTTGTTTGTAGTAAACAACATCTCAATTTCAGCAAATCAGCAATCCACCCTCCTACCAAAACCTTAGTAAGCTGTGTGGGGAACTGTTTTGTGTAATTGCTGCTCACTTCTTGCGTTTCTTTTTGCTGGTCTAGCCTTTCTGCATAATATTGATGTTAATGTTTGATTGTTTCTTCTAGTGATTCTCTAACAATTCTTCCCTCATCCCTAAATGGATAAACTACCTTGGGAAGATGGAAACAGAGAAGTGCTGCTATTTGTTTTCTCTTTTTTATTTAGTGATTACCCTTTCATTTGATTGGAATTCATTGCTGTGGTGCTTTTGTTTTTTGGGTACAAGGGAAATTTCGCAGAAGCTAATTTGTAATGTTGATGTTTCCAGTCAGAGGTGTTTGCCGTTGCATTTGCCCTTCTTGCTGCTGGTGCTGTAATTTTGACATTGAATGTACTGCTATTGGTAAGAACCTTCAATGCTTTTCCCCCCTATTATTGTGTAGAGTTGTAGTTATCAAGTGCATGCTACTTACAAATGGGTTTGTAATGGTTTGTCCAGGGTGGACACATTATATTCTTCCAAAGTTTGAGCCTTCTGGGCTACTGCCTGTTCCCTTTGGACGTTGGAGCTCTAATCTGCATGTTGATAGAAAATGTGATTTTCAAGATGGTTATGGTATGTGTGACTTTGGCCTGGAGTTCGTGGGCTGCATATCCATTTATGAGTTCGGCAGTCGGCCCAAGGAGAAAAGCTCTGGCACTCTATCCAGTCTTCCTCATGTATGTATCTGTTGGTTTCCTCATCATTGCTATTGATTGATTCGTGAGGGTGTGCTCGTCAGATATCAGCACCTACATACATATATATATATATATATTTCATGCTGAGCTGGTTCTGATTCTTCGAACAAAATCTTGTTGGCCTGATAGATTATCGATACCCAATTTTGTATAACATTCTATAGCAAATTATATGTGAACCTGGATAACATTCTCTGAATGTTTGATATTATAGTTTGTTCAGTTGAGATAATTTTCTGTGTAATGACAAGTGTTTGGAATTTGTATCTGAAGTTCAGATTTCAACGAAATATCATCTCTGATCTGTACTGATTATTCTTTTGTTTTAGTTCGTTTCGGATGTTCCTTAGGTGATAACACATAAAACTTGTCTCTCTGCAGTGCACTGCACTGCACTGCACCGGACCGGCT

mRNA sequence

GTTACTTAAGAGAGAGAAAAGAAGAATGGAGAAACCAAAAATTATTCTTAAACAAAGATTTCATTTTATTGATTTTCATTTTCAATCTCTTTCCCTTTCCCCTTGTCCAACCAAACCGCTTCTAAATGTTCATTTAAAACTTAAAAGTCGGGTGCCCAATAAACATTTTGTAACCGGGTGAAACCATAGTTTGGGCAATCTCATCGTCCTACAATGCTCTTCTTCTCCGACAACCTCCTTCTTCCCCGCCATTGACATCTCTCTGTCTCTCTCTCTCCTTCTTCCTTCGCACCCCTTTCCCCCCCTTCTCTTCAGATCTAATCTTAACTCCCAAATTCAACCACCATCATCATCTTCATTGATCAACAACATCAATTGATAATCAAAATCAACAAAATCATCAAAAGAAAAAATGTCACACACAAATCCAAACAGCGACACAATTCCACTCCATTCCTCCTCCCAATCTGACATCGACGAGATCGAGAATCTCATACACTCCTCCATCCACTCTGCCCCTTCCACCGTTCTACCTGCCGCCCGGCCTCCTTCTCCTCCACGCGCCTCCATCCCCGTCTCCTCCTCCTCCAACTCAACAACACCATCTCCCTTTATCACCTCCAATCTCCCTCCTCCTTCCGCCCCACCTCCCTCCACCAAACCCCACTTCGTCCCCGCCGCCGCTGCACCTCCTCCTCTGCCGTCCTCCTCCACTGCTGGTATCGCTACTTCCGGGTTCGGATCTCCTCCTAACACGCTTACTGAACCTGTTTGGGATACTGTCAAACGAGATCTCTCCCGAATTGTTAGTAATCTGAAGCTGGTTGTGTTTCCCAATCCGTACAGAGAAGACCCCGGTAAGGCGCTTCGTGATTGGGATCTGTGGGGCCCCTTTTTCTTCATTGTCTTCCTTGGTCTTACACTTTCATGGTCTGCTTCAGTCAAGAAGTCAGAGGTGTTTGCCGTTGCATTTGCCCTTCTTGCTGCTGGTGCTGTAATTTTGACATTGAATGTACTGCTATTGGGTGGACACATTATATTCTTCCAAAGTTTGAGCCTTCTGGGCTACTGCCTGTTCCCTTTGGACGTTGGAGCTCTAATCTGCATGTTGATAGAAAATGTGATTTTCAAGATGGTTATGGTATGTGTGACTTTGGCCTGGAGTTCGTGGGCTGCATATCCATTTATGAGTTCGGCAGTCGGCCCAAGGAGAAAAGCTCTGGCACTCTATCCAGTCTTCCTCATGTATGTATCTGTTGGTTTCCTCATCATTGCTATTGATTGATTCGTGAGGGTGTGCTCGTCAGATATCAGCACCTACATACATATATATATATATATATTTCATGCTGAGCTGGTTCTGATTCTTCGAACAAAATCTTGTTGGCCTGATAGATTATCGATACCCAATTTTGTATAACATTCTATAGCAAATTATATGTGAACCTGGATAACATTCTCTGAATGTTTGATATTATAGTTTGTTCAGTTGAGATAATTTTCTGTGTAATGACAAGTGTTTGGAATTTGTATCTGAAGTTCAGATTTCAACGAAATATCATCTCTGATCTGTACTGATTATTCTTTTGTTTTAGTTCGTTTCGGATGTTCCTTAGGTGATAACACATAAAACTTGTCTCTCTGCAGTGCACTGCACTGCACTGCACCGGACCGGCT

Coding sequence (CDS)

ATGTCACACACAAATCCAAACAGCGACACAATTCCACTCCATTCCTCCTCCCAATCTGACATCGACGAGATCGAGAATCTCATACACTCCTCCATCCACTCTGCCCCTTCCACCGTTCTACCTGCCGCCCGGCCTCCTTCTCCTCCACGCGCCTCCATCCCCGTCTCCTCCTCCTCCAACTCAACAACACCATCTCCCTTTATCACCTCCAATCTCCCTCCTCCTTCCGCCCCACCTCCCTCCACCAAACCCCACTTCGTCCCCGCCGCCGCTGCACCTCCTCCTCTGCCGTCCTCCTCCACTGCTGGTATCGCTACTTCCGGGTTCGGATCTCCTCCTAACACGCTTACTGAACCTGTTTGGGATACTGTCAAACGAGATCTCTCCCGAATTGTTAGTAATCTGAAGCTGGTTGTGTTTCCCAATCCGTACAGAGAAGACCCCGGTAAGGCGCTTCGTGATTGGGATCTGTGGGGCCCCTTTTTCTTCATTGTCTTCCTTGGTCTTACACTTTCATGGTCTGCTTCAGTCAAGAAGTCAGAGGTGTTTGCCGTTGCATTTGCCCTTCTTGCTGCTGGTGCTGTAATTTTGACATTGAATGTACTGCTATTGGGTGGACACATTATATTCTTCCAAAGTTTGAGCCTTCTGGGCTACTGCCTGTTCCCTTTGGACGTTGGAGCTCTAATCTGCATGTTGATAGAAAATGTGATTTTCAAGATGGTTATGGTATGTGTGACTTTGGCCTGGAGTTCGTGGGCTGCATATCCATTTATGAGTTCGGCAGTCGGCCCAAGGAGAAAAGCTCTGGCACTCTATCCAGTCTTCCTCATGTATGTATCTGTTGGTTTCCTCATCATTGCTATTGATTGA

Protein sequence

MSHTNPNSDTIPLHSSSQSDIDEIENLIHSSIHSAPSTVLPAARPPSPPRASIPVSSSSNSTTPSPFITSNLPPPSAPPPSTKPHFVPAAAAPPPLPSSSTAGIATSGFGSPPNTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLIENVIFKMVMVCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVGFLIIAID

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo13539.1	Spo13539.1	mRNA

Homology

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BLAST of Spo13539.1 vs. NCBI nr
Match: gi|902207533|gb|KNA15728.1| (hypothetical protein SOVF_095290 [Spinacia oleracea])

HSP 1 Score: 545.4 bits (1404), Expect = 5.900e-152
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 1


		  
Query: 1   MSHTNPNSDTIPLHSSSQSDIDEIENLIHSSIHSAPSTVLPAARPPSPPRASIPVSSSSN 60
           MSHTNPNSDTIPLHSSSQSDIDEIENLIHSSIHSAPSTVLPAARPPSPPRASIPVSSSSN
Sbjct: 1   MSHTNPNSDTIPLHSSSQSDIDEIENLIHSSIHSAPSTVLPAARPPSPPRASIPVSSSSN 60

Query: 61  STTPSPFITSNLPPPSAPPPSTKPHFVPAAAAPPPLPSSSTAGIATSGFGSPPNTLTEPV 120
           STTPSPFITSNLPPPSAPPPSTKPHFVPAAAAPPPLPSSSTAGIATSGFGSPPNTLTEPV
Sbjct: 61  STTPSPFITSNLPPPSAPPPSTKPHFVPAAAAPPPLPSSSTAGIATSGFGSPPNTLTEPV 120

Query: 121 WDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKS 180
           WDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKS
Sbjct: 121 WDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKS 180

Query: 181 EVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLIENVIFK 240
           EVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLIENVIFK
Sbjct: 181 EVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLIENVIFK 240

Query: 241 MVMVCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVGFLIIAID 291
           MVMVCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 241 MVMVCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVGFLIIAID 290

[Close]

BLAST of Spo13539.1 vs. NCBI nr
Match: gi|731352002|ref|XP_010687315.1| (PREDICTED: protein YIPF6 homolog [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 457.6 bits (1176), Expect = 1.600e-125
Identity = 249/290 (85.86%), Postives = 262/290 (90.34%), Query Frame = 1


		  
Query: 1   MSHTNPNSDTIPLHSSSQSDIDEIENLIHSSIHSAPSTVLPAARPPSPPRASIPVSSSSN 60
           MSH    SDTIPLHS+SQSDIDEIENLIHSS+HS PS+VLPAA PPSPPRASIP S    
Sbjct: 1   MSHLKSESDTIPLHSTSQSDIDEIENLIHSSLHSTPSSVLPAAHPPSPPRASIPAS---- 60

Query: 61  STTPSPFITSNLPPPSAPPPSTKPHFVPAAAAPPPLPSSSTAGIATSGFGSPPNTLTEPV 120
              PSPFI SNLPPPS P  ++ P  +P+AA PPP P+SS+AGI+ SGFG PPNTLTEPV
Sbjct: 61  ---PSPFIPSNLPPPSKP--TSIPITIPSAAPPPPPPASSSAGISASGFGPPPNTLTEPV 120

Query: 121 WDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKS 180
           WDTVKRDLSRIVSNLKLVVFPNP REDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKS
Sbjct: 121 WDTVKRDLSRIVSNLKLVVFPNPNREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKS 180

Query: 181 EVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLIENVIFK 240
           EVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICML +NVI K
Sbjct: 181 EVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVILK 240

Query: 241 MVMVCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVGFLIIAID 291
           +V+VCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 241 LVVVCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVGFLIIAID 281

[Close]

BLAST of Spo13539.1 vs. NCBI nr
Match: gi|1009105440|ref|XP_015872999.1| (PREDICTED: protein YIPF6 homolog [Ziziphus jujuba])

HSP 1 Score: 425.6 bits (1093), Expect = 6.800e-116
Identity = 242/293 (82.59%), Postives = 256/293 (87.37%), Query Frame = 1


		  
Query: 1   MSHTNPNSDTIPLHSSSQSDIDEIENLIHSSIHSAPSTVLPAARPPSPPRASIPVSSSSN 60
           MSH    SDT+PLH SSQSDIDEIENLI++S+ S P+TVLPA RPPSPPRASIPVSS   
Sbjct: 1   MSH----SDTVPLHPSSQSDIDEIENLINASVQSGPATVLPA-RPPSPPRASIPVSS--- 60

Query: 61  STTPSPFITSNLPPPSAPPPST-KPHFVPAAAAPPPLPSSS--TAGIATSGFGSPPNTLT 120
               SPFI SN+PP +    +  KP  VP   APPPLPSSS  T  I  +GFGSPPNTLT
Sbjct: 61  ----SPFIQSNIPPTTTTTTTNQKPPTVP---APPPLPSSSNGTPNIGATGFGSPPNTLT 120

Query: 121 EPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASV 180
           EPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASV
Sbjct: 121 EPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASV 180

Query: 181 KKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLIENV 240
           KKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICML +NV
Sbjct: 181 KKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNV 240

Query: 241 IFKMVMVCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVGFLIIAID 291
           + K+++VCVTLAWSSWAAYPFMSSAV PRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 241 LVKVIVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 278

[Close]

BLAST of Spo13539.1 vs. NCBI nr
Match: gi|729372441|ref|XP_010548621.1| (PREDICTED: protein YIPF6 homolog [Tarenaya hassleriana])

HSP 1 Score: 425.6 bits (1093), Expect = 6.800e-116
Identity = 241/294 (81.97%), Postives = 252/294 (85.71%), Query Frame = 1


		  
Query: 1   MSHTNPNSDTIPLHSSSQSDIDEIENLIHSSIHSAPSTVLPAARPPSPPRASIPVSSSSN 60
           MSH    SDTIPLH SSQSDIDEIENLI+ S+ S P+TVLPA RPPSP R SIPVSS   
Sbjct: 1   MSH----SDTIPLHPSSQSDIDEIENLINDSVQSGPATVLPA-RPPSPTRPSIPVSS--- 60

Query: 61  STTPSPFITSNLPPPSAPPPSTKPHFVPAAAAPPPLPSSSTAG----IATSGFGSPPNTL 120
               SPFI SNLPPPS    S+    VP+A  PPPLP S  +G    I  SGFG PPNTL
Sbjct: 61  ----SPFIQSNLPPPS----SSAAQKVPSAPLPPPLPPSGDSGGSKTIGASGFGPPPNTL 120

Query: 121 TEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSAS 180
           TEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSAS
Sbjct: 121 TEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSAS 180

Query: 181 VKKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLIEN 240
           VKKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGA+ICML +N
Sbjct: 181 VKKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGAVICMLKDN 240

Query: 241 VIFKMVMVCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVGFLIIAID 291
           VI K+++VCVTLAWSSWAAYPFMSSAV PRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 241 VIMKIIVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 278

[Close]

BLAST of Spo13539.1 vs. NCBI nr
Match: gi|567922760|ref|XP_006453386.1| (hypothetical protein CICLE_v10009141mg [Citrus clementina])

HSP 1 Score: 424.9 bits (1091), Expect = 1.200e-115
Identity = 238/293 (81.23%), Postives = 260/293 (88.74%), Query Frame = 1


		  
Query: 4   TNPNSDTIPLHSSSQSDIDEIENLIHSSIHSAPSTVLPAARPPSPPR-ASIPVSSSSNST 63
           +NP+SDTIPLH+SSQSDIDEIENLI++S    P+TVLPA RPPSPPR A+IPVSS+    
Sbjct: 2   SNPHSDTIPLHASSQSDIDEIENLINAS----PATVLPA-RPPSPPRPATIPVSSA---- 61

Query: 64  TPSPFITSNLPPPSAPPPSTKPHFVPAAAAPPPLPSSSTAG-----IATSGFGSPPNTLT 123
              PFI SN+PPP   PP++    VP+   PPPLPSS+ +G     IA++GFGSPPNTLT
Sbjct: 62  ---PFIQSNIPPP---PPTSSNQKVPSVPVPPPLPSSTISGGSRPNIASTGFGSPPNTLT 121

Query: 124 EPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASV 183
           EPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASV
Sbjct: 122 EPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASV 181

Query: 184 KKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLIENV 243
           KKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLD+GALICML +NV
Sbjct: 182 KKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNV 241

Query: 244 IFKMVMVCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVGFLIIAID 291
           + K+++VCVTLAWSSWAAYPFMSSAV PRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 242 LVKVIVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 279

[Close]

BLAST of Spo13539.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R860_SPIOL (Protein YIPF OS=Spinacia oleracea GN=SOVF_095290 PE=3 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 4.100e-152
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 1


		  
Query: 1   MSHTNPNSDTIPLHSSSQSDIDEIENLIHSSIHSAPSTVLPAARPPSPPRASIPVSSSSN 60
           MSHTNPNSDTIPLHSSSQSDIDEIENLIHSSIHSAPSTVLPAARPPSPPRASIPVSSSSN
Sbjct: 1   MSHTNPNSDTIPLHSSSQSDIDEIENLIHSSIHSAPSTVLPAARPPSPPRASIPVSSSSN 60

Query: 61  STTPSPFITSNLPPPSAPPPSTKPHFVPAAAAPPPLPSSSTAGIATSGFGSPPNTLTEPV 120
           STTPSPFITSNLPPPSAPPPSTKPHFVPAAAAPPPLPSSSTAGIATSGFGSPPNTLTEPV
Sbjct: 61  STTPSPFITSNLPPPSAPPPSTKPHFVPAAAAPPPLPSSSTAGIATSGFGSPPNTLTEPV 120

Query: 121 WDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKS 180
           WDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKS
Sbjct: 121 WDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKS 180

Query: 181 EVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLIENVIFK 240
           EVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLIENVIFK
Sbjct: 181 EVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLIENVIFK 240

Query: 241 MVMVCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVGFLIIAID 291
           MVMVCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 241 MVMVCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVGFLIIAID 290

[Close]

BLAST of Spo13539.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ELD8_BETVU (Protein YIPF OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g189310 PE=3 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 1.100e-125
Identity = 249/290 (85.86%), Postives = 262/290 (90.34%), Query Frame = 1


		  
Query: 1   MSHTNPNSDTIPLHSSSQSDIDEIENLIHSSIHSAPSTVLPAARPPSPPRASIPVSSSSN 60
           MSH    SDTIPLHS+SQSDIDEIENLIHSS+HS PS+VLPAA PPSPPRASIP S    
Sbjct: 1   MSHLKSESDTIPLHSTSQSDIDEIENLIHSSLHSTPSSVLPAAHPPSPPRASIPAS---- 60

Query: 61  STTPSPFITSNLPPPSAPPPSTKPHFVPAAAAPPPLPSSSTAGIATSGFGSPPNTLTEPV 120
              PSPFI SNLPPPS P  ++ P  +P+AA PPP P+SS+AGI+ SGFG PPNTLTEPV
Sbjct: 61  ---PSPFIPSNLPPPSKP--TSIPITIPSAAPPPPPPASSSAGISASGFGPPPNTLTEPV 120

Query: 121 WDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKS 180
           WDTVKRDLSRIVSNLKLVVFPNP REDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKS
Sbjct: 121 WDTVKRDLSRIVSNLKLVVFPNPNREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKS 180

Query: 181 EVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLIENVIFK 240
           EVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICML +NVI K
Sbjct: 181 EVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVILK 240

Query: 241 MVMVCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVGFLIIAID 291
           +V+VCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 241 LVVVCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVGFLIIAID 281

[Close]

BLAST of Spo13539.1 vs. UniProtKB/TrEMBL
Match: A0A061G9V2_THECC (Protein YIPF OS=Theobroma cacao GN=TCM_027865 PE=3 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 8.100e-116
Identity = 237/291 (81.44%), Postives = 256/291 (87.97%), Query Frame = 1


		  
Query: 4   TNPNSDTIPLHSSSQSDIDEIENLIHSSIHSAPSTVLPAARPPSPPRASIPVSSSSNSTT 63
           +N +SDTIPLH+SSQSDIDEIENLI++S+ S P+TVLPA RPPSPPRASIPVSSS     
Sbjct: 2   SNSHSDTIPLHASSQSDIDEIENLINASVQSGPATVLPA-RPPSPPRASIPVSSS----- 61

Query: 64  PSPFITSNLPPP----SAPPPSTKPHFVPAAAAPPPLPSSSTAGIATSGFGSPPNTLTEP 123
             PFI SN+PPP    S+   + K   VPAA  PPP P  +++ I  +GFG PPNTLTEP
Sbjct: 62  --PFIQSNIPPPPPVSSSSSSNQKVPSVPAAPPPPP-PVGNSSSIVATGFGPPPNTLTEP 121

Query: 124 VWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKK 183
           VWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKK
Sbjct: 122 VWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKK 181

Query: 184 SEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLIENVIF 243
           SEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLD+GALICML +NVI 
Sbjct: 182 SEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIV 241

Query: 244 KMVMVCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVGFLIIAID 291
           K+++VCVTLAWSSWAAYPFMSSAV PRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 242 KVIVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 283

[Close]

BLAST of Spo13539.1 vs. UniProtKB/TrEMBL
Match: V4UVE3_9ROSI (Protein YIPF OS=Citrus clementina GN=CICLE_v10009141mg PE=3 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 8.100e-116
Identity = 238/293 (81.23%), Postives = 260/293 (88.74%), Query Frame = 1


		  
Query: 4   TNPNSDTIPLHSSSQSDIDEIENLIHSSIHSAPSTVLPAARPPSPPR-ASIPVSSSSNST 63
           +NP+SDTIPLH+SSQSDIDEIENLI++S    P+TVLPA RPPSPPR A+IPVSS+    
Sbjct: 2   SNPHSDTIPLHASSQSDIDEIENLINAS----PATVLPA-RPPSPPRPATIPVSSA---- 61

Query: 64  TPSPFITSNLPPPSAPPPSTKPHFVPAAAAPPPLPSSSTAG-----IATSGFGSPPNTLT 123
              PFI SN+PPP   PP++    VP+   PPPLPSS+ +G     IA++GFGSPPNTLT
Sbjct: 62  ---PFIQSNIPPP---PPTSSNQKVPSVPVPPPLPSSTISGGSRPNIASTGFGSPPNTLT 121

Query: 124 EPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASV 183
           EPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASV
Sbjct: 122 EPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASV 181

Query: 184 KKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLIENV 243
           KKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLD+GALICML +NV
Sbjct: 182 KKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNV 241

Query: 244 IFKMVMVCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVGFLIIAID 291
           + K+++VCVTLAWSSWAAYPFMSSAV PRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 242 LVKVIVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 279

[Close]

BLAST of Spo13539.1 vs. UniProtKB/TrEMBL
Match: A0A067E6H0_CITSI (Protein YIPF OS=Citrus sinensis GN=CISIN_1g023628mg PE=3 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 8.100e-116
Identity = 238/293 (81.23%), Postives = 260/293 (88.74%), Query Frame = 1


		  
Query: 4   TNPNSDTIPLHSSSQSDIDEIENLIHSSIHSAPSTVLPAARPPSPPR-ASIPVSSSSNST 63
           +NP+SDTIPLH+SSQSDIDEIENLI++S    P+TVLPA RPPSPPR A+IPVSS+    
Sbjct: 2   SNPHSDTIPLHASSQSDIDEIENLINAS----PATVLPA-RPPSPPRPATIPVSSA---- 61

Query: 64  TPSPFITSNLPPPSAPPPSTKPHFVPAAAAPPPLPSSSTAG-----IATSGFGSPPNTLT 123
              PFI SN+PPP   PP++    VP+   PPPLPSS+ +G     IA++GFGSPPNTLT
Sbjct: 62  ---PFIQSNIPPP---PPTSSNQKVPSVPVPPPLPSSTISGGSRPNIASTGFGSPPNTLT 121

Query: 124 EPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASV 183
           EPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASV
Sbjct: 122 EPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASV 181

Query: 184 KKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLIENV 243
           KKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLD+GALICML +NV
Sbjct: 182 KKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNV 241

Query: 244 IFKMVMVCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVGFLIIAID 291
           + K+++VCVTLAWSSWAAYPFMSSAV PRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 242 LVKVIVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 279

[Close]

BLAST of Spo13539.1 vs. ExPASy Swiss-Prot
Match: YIPF6_DICDI (Protein YIPF6 homolog OS=Dictyostelium discoideum GN=yipf6 PE=3 SV=2)

HSP 1 Score: 130.2 bits (326), Expect = 3.700e-29
Identity = 75/177 (42.37%), Postives = 110/177 (62.15%), Query Frame = 1


		  
Query: 113 PNTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLS 172
           PNTL EPV  T+ RDL  I   L  V+ P   R +    LRDWDLWGP    + + + LS
Sbjct: 7   PNTLDEPVIQTILRDLKMIGFKLYHVILP---RGNAANVLRDWDLWGPLILCLVMAIFLS 66

Query: 173 WSASVKKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICM 232
            SA  +K+  F + F ++  GA I+T+N  LL G+I FFQS+ +LGYC+FPL +  +I  
Sbjct: 67  ISAEEQKALEFTIVFVVVWCGAAIVTVNGQLLCGNISFFQSVCILGYCIFPLTIATIIIW 126

Query: 233 LIEN--VIFKMVMVCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVGFLII 288
           +I+N  +I K+ +V     WSS+A+Y F+ S+V   R+ LA+YPV L Y+ + +L++
Sbjct: 127 IIQNFTMIVKLPIVGGAWFWSSFASYGFLGSSVPESRRLLAVYPVLLFYLVIAWLVV 180

[Close]

BLAST of Spo13539.1 vs. ExPASy Swiss-Prot
Match: YIPF6_XENTR (Protein YIPF6 OS=Xenopus tropicalis GN=yipf6 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.000e-27
Identity = 77/206 (37.38%), Postives = 117/206 (56.80%), Query Frame = 1


		  
Query: 95  PLPSSSTAGIATSGFGSPPNTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRD 154
           P+    T  +A++      +TL EPV DT+ RDL  + +    V++P    +     LRD
Sbjct: 29  PVEGEITVPMASTSQEDDLSTLDEPVKDTIMRDLKAVGNKFLHVMYP----KKSTTLLRD 88

Query: 155 WDLWGPFFFIVFLGLTLSWSASVKKSE---VFAVAFALLAAGAVILTLNVLLLGGHIIFF 214
           WDLWGP    V L L L    +  K +    FA  F ++  GAV++TLN  LLGG I FF
Sbjct: 89  WDLWGPLVLCVSLALMLQGGNADSKDDGGPQFAEVFVIIWFGAVVITLNSKLLGGTISFF 148

Query: 215 QSLSLLGYCLFPLDVGALICMLI-------ENVIFKMVMVCVTLAWSSWAAYPFMSSAVG 274
           QSL +LGYC+ PL V  L+C L+        + I ++V+V V  AWS++A+  F++ +  
Sbjct: 149 QSLCVLGYCILPLTVAMLVCRLVLLLSHTTASFIVRLVVVTVMFAWSTFASTAFLADSQP 208

Query: 275 PRRKALALYPVFLMYVSVGFLIIAID 291
           P R+ALA+YP+FL Y  + ++++  +
Sbjct: 209 PNRRALAVYPIFLFYFVISWMVLTFN 230

[Close]

BLAST of Spo13539.1 vs. ExPASy Swiss-Prot
Match: YIPF6_HUMAN (Protein YIPF6 OS=Homo sapiens GN=YIPF6 PE=1 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 4.200e-25
Identity = 73/184 (39.67%), Postives = 104/184 (56.52%), Query Frame = 1


		  
Query: 114 NTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSW 173
           +TL E V +T+ RDL  +      V++P          LRDWDLWGP    V L L L  
Sbjct: 52  STLNESVRNTIMRDLKAVGKKFMHVLYPRK----SNTLLRDWDLWGPLILCVTLALMLQR 111

Query: 174 SASVKKSE---VFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALI 233
            ++  + +    FA  F ++  GAV +TLN  LLGG+I FFQSL +LGYC+ PL V  LI
Sbjct: 112 DSADSEKDGGPQFAEVFVIVWFGAVTITLNSKLLGGNISFFQSLCVLGYCILPLTVAMLI 171

Query: 234 CMLI-------ENVIFKMVMVCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVG 288
           C L+        N + ++ +V V  AWS  A+  F++ +  P R+ALA+YPVFL Y  + 
Sbjct: 172 CRLVLLADPGPVNFMVRLFVVIVMFAWSIVASTAFLADSQPPNRRALAVYPVFLFYFVIS 231

[Close]

BLAST of Spo13539.1 vs. ExPASy Swiss-Prot
Match: YIPF6_MOUSE (Protein YIPF6 OS=Mus musculus GN=Yipf6 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 5.500e-25
Identity = 73/185 (39.46%), Postives = 105/185 (56.76%), Query Frame = 1


		  
Query: 114 NTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSW 173
           +TL E +  T+ RDL  +      V++P          LRDWDLWGP    V L L L  
Sbjct: 52  STLNESIRRTIMRDLKAVGRKFMHVLYPRK----SNALLRDWDLWGPLILCVTLALMLQK 111

Query: 174 SASVKKSE----VFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGAL 233
           S+   K++     FA  F ++  GAV +TLN  LLGG+I FFQSL +LGYC+ PL++  L
Sbjct: 112 SSIDGKNDGGGPEFAEVFVIIWFGAVTITLNSKLLGGNISFFQSLCVLGYCILPLNIAML 171

Query: 234 ICMLI-------ENVIFKMVMVCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSV 288
           IC L+        N + ++ +V +  AWS  A+  F++ +  P RKALA+YPVFL Y  +
Sbjct: 172 ICRLLLLAGQGPINFMIRLFVVLLMFAWSVVASTAFLADSQPPNRKALAVYPVFLFYFVI 231

[Close]

BLAST of Spo13539.1 vs. ExPASy Swiss-Prot
Match: YIPF6_BOVIN (Protein YIPF6 OS=Bos taurus GN=YIPF6 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.200e-24
Identity = 71/184 (38.59%), Postives = 103/184 (55.98%), Query Frame = 1


		  
Query: 114 NTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSW 173
           +TL E V +T+ RDL  +      V++P          LRDWDLWGP    V L L L  
Sbjct: 52  STLNESVQNTIMRDLKAVGKKFMHVLYPRK----SNTLLRDWDLWGPLILCVTLALMLQR 111

Query: 174 SASVKKSE---VFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALI 233
            +   + +    FA  F ++  GAV +TLN  LLGG+I FFQSL +LGYC+ PL +  L+
Sbjct: 112 GSVDSEKDGGPQFAEVFVIVWFGAVTITLNSKLLGGNISFFQSLCVLGYCILPLTMAMLV 171

Query: 234 CMLI-------ENVIFKMVMVCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVG 288
           C L+        N + ++ +V +  AWS  A+  F++ +  P RKALA+YPVFL Y  + 
Sbjct: 172 CRLVLLAEPGPVNFMVRLFVVIIMFAWSIVASTAFLADSQPPNRKALAVYPVFLFYFVIS 231

[Close]

BLAST of Spo13539.1 vs. TAIR (Arabidopsis)
Match: AT2G18840.1 (Integral membrane Yip1 family protein)

HSP 1 Score: 410.2 bits (1053), Expect = 1.000e-114
Identity = 234/284 (82.39%), Postives = 246/284 (86.62%), Query Frame = 1


		  
Query: 9   DTIPLHSSSQSDIDEIENLIHSSIHSAPSTVLPAARPPSPPRASIPVSSSSNSTTPSPFI 68
           DT+PLH SSQSDIDEIENLI+ S+ S P TVL AARPPSP R SIPVSSSS+S   SPF+
Sbjct: 5   DTVPLHPSSQSDIDEIENLINESVQSGPGTVL-AARPPSPTRPSIPVSSSSSS---SPFM 64

Query: 69  TSNLPPPSAPPPSTKPHFVPAAAAPPPLP--SSSTAGIATSGFGSPPNTLTEPVWDTVKR 128
            SNLPP     PS+    V     PPPLP  S+S+     S FGSPPNTLTEPVWDTVKR
Sbjct: 65  QSNLPPLH---PSSSAQKVTHVPVPPPLPAVSNSSNFQGASAFGSPPNTLTEPVWDTVKR 124

Query: 129 DLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVA 188
           DLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVA
Sbjct: 125 DLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVA 184

Query: 189 FALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLIENVIFKMVMVCV 248
           FALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGA+ICML +NVI KMV+V V
Sbjct: 185 FALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGAVICMLKDNVILKMVVVSV 244

Query: 249 TLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVGFLIIAID 291
           TLAWSSWAAYPFMSSAV PRRKALALYPVFLMYVSVGFLIIAI+
Sbjct: 245 TLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAIN 281

[Close]

BLAST of Spo13539.1 vs. TAIR (Arabidopsis)
Match: AT4G30260.1 (Integral membrane Yip1 family protein)

HSP 1 Score: 406.8 bits (1044), Expect = 1.200e-113
Identity = 234/293 (79.86%), Postives = 247/293 (84.30%), Query Frame = 1


		  
Query: 1   MSHTNPNSDTIPLHSSSQSDIDEIENLIHSSIHSAPSTVLPAARPPSPPRASIPVSSSSN 60
           MSH    +DTIPL+ SSQSDIDEIEN+++ S  S P TVLPA RPPSP R SIPVSSS  
Sbjct: 1   MSH----NDTIPLYQSSQSDIDEIENMMNDSFQSGPGTVLPA-RPPSPIRPSIPVSSS-- 60

Query: 61  STTPSPFITSNLPPPSAPPPSTKPHFVPAAAAPPPLPSSSTAG---IATSGFGSPPNTLT 120
                PF+ SNLPP   P  S+    V    APPPLPS+   G   I  SGFGSPPNTLT
Sbjct: 61  -----PFVQSNLPP-LPPSSSSSTQKVMPVPAPPPLPSAGNEGNKSIGGSGFGSPPNTLT 120

Query: 121 EPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASV 180
           EPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASV
Sbjct: 121 EPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASV 180

Query: 181 KKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLIENV 240
           KKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGA+ICML +NV
Sbjct: 181 KKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGAVICMLKDNV 240

Query: 241 IFKMVMVCVTLAWSSWAAYPFMSSAVGPRRKALALYPVFLMYVSVGFLIIAID 291
           I KMV+V VTLAWSSWAAYPFMS+AV PRRKALALYPVFLMYVSVGFLIIAI+
Sbjct: 241 ILKMVVVSVTLAWSSWAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAIN 280

The following BLAST results are available for this feature:

BLAST of Spo13539.1 vs. NCBI nr
BLAST of Spo13539.1 vs. UniProtKB/TrEMBL
BLAST of Spo13539.1 vs. ExPASy Swiss-Prot
BLAST of Spo13539.1 vs. TAIR (Arabidopsis)

BLAST of Spo13539.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902207533\|gb\|KNA15728.1\|	5.9e-152	100.	hypothetical protein SOVF_0952...	[more]
gi\|731352002\|ref\|XP_010687315.1\|	1.6e-125	85.8	PREDICTED: protein YIPF6 homol...	[more]
gi\|1009105440\|ref\|XP_015872999.1\|	6.8e-116	82.5	PREDICTED: protein YIPF6 homol...	[more]
gi\|729372441\|ref\|XP_010548621.1\|	6.8e-116	81.9	PREDICTED: protein YIPF6 homol...	[more]
gi\|567922760\|ref\|XP_006453386.1\|	1.2e-115	81.2	hypothetical protein CICLE_v10...	[more]

BLAST of Spo13539.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R860_SPIOL	4.1e-152	100.	Protein YIPF OS=Spinacia olera...	[more]
A0A0J8ELD8_BETVU	1.1e-125	85.8	Protein YIPF OS=Beta vulgaris ...	[more]
A0A061G9V2_THECC	8.1e-116	81.4	Protein YIPF OS=Theobroma caca...	[more]
V4UVE3_9ROSI	8.1e-116	81.2	Protein YIPF OS=Citrus clement...	[more]
A0A067E6H0_CITSI	8.1e-116	81.2	Protein YIPF OS=Citrus sinensi...	[more]

BLAST of Spo13539.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
YIPF6_DICDI	3.7e-29	42.3	Protein YIPF6 homolog OS=Dicty...	[more]
YIPF6_XENTR	2.0e-27	37.3	Protein YIPF6 OS=Xenopus tropi...	[more]
YIPF6_HUMAN	4.2e-25	39.6	Protein YIPF6 OS=Homo sapiens ...	[more]
YIPF6_MOUSE	5.5e-25	39.4	Protein YIPF6 OS=Mus musculus ...	[more]
YIPF6_BOVIN	1.2e-24	38.5	Protein YIPF6 OS=Bos taurus GN...	[more]

BLAST of Spo13539.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT2G18840.1	1.0e-114	82.3	Integral membrane Yip1 family ...	[more]
AT4G30260.1	1.2e-113	79.8	Integral membrane Yip1 family ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006977	Yip1 domain	PFAM	PF04893	Yip1	coord: 140..271 score: 4.0
None	No IPR available	PANTHER	PTHR21236	GOLGI MEMBRANE PROTEIN YIP1	coord: 3..72 score: 2.2E-171coord: 105..290 score: 2.2E
None	No IPR available	PANTHER	PTHR21236:SF9	SUBFAMILY NOT NAMED	coord: 3..72 score: 2.2E-171coord: 105..290 score: 2.2E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015774	polysaccharide transport
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005768	endosome
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0016020	membrane
molecular_function	GO:0005515	protein binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo25370	0.69	Barchart \| Table