Spo13537 (gene) | SpinachBase

Overview


Name	Spo13537
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	GAG1At protein
Location	chr2 : 1250295 .. 1255026 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAACGACACTAACTCGGAGTTTCTCCAATTTCTTTTCCATTTTGGTGTGGTGGCATTGATTAACGACGCTAGTTTAAATTAAACCGGTTGATGAACCCTAACATTGGAGAGGAGAGCTAGTTGGGAACTCAGAGAAAATGGCAAGCGAAGGCAAACCGAACCCAAGCAGTGGAATCGGAATTGGAAATGGCAATGGAGCTGGAAATGGTGGAGGATTCAGAGGCAAAGTAAACCATTTCCTATACAGCGGAGACAAAAAGCACGTCTTCGCGGGTTTGACCATTATCACTGCTATCTTCGCCGTCCCCTGGTACTACATGAGCCGAGGTACACTCTTTCTCTCTCCTCCTTTCATTTTCTCTTGATGGTTCATTGATGCCGTTCTTTGTATTGGGTTTTTATGAAATGAGTTTTTCTTGCTTTTTTTAATACAGGGGTCTGCGATTGTTTCATGGACAATCTTGAATTAGGAGTACTAGGTTTTAATTATATTTTTGTGGGAATATTGTTATGATTTTTACGTTTCTATGAGTTATTATTGGAACCCTTGAGAAAATTGAAATGGAGTTCCTTTTGCTTTATTGTAATGTAGAGGTAGGGACTTGAAAGATTGTCAAACGTTGGAGTAATTGGACTATGAGAGATTTTGGGATTGATGAGGCTCTAGTAACCCGGTCGGTGTCGATGAGGGCCTTTCTCAACAAAAGTTAAGTGTATTTCACAATGACAATTTAGCATCAATAGTCTCTTTGTTAGGCTATGTACGTCTAACCTTCATTCCATAAGCAGTGCTTAGTCTGAGATTGTTAGGAGGTGTTTGGTAAATGTAAATGACTTGATGGTACTGTTGAATGCTGATGGAATTTGGACGAATGAGCTTGCTCTAACTAGGGTTTACTTTAGCTAGTTTAGCATTTGGGCATGGCTTGGTTATTGGAACTGTTCTTGGTTTCACAAACTTTTAACCAAGATATCGGCCCGATTTAGTTGGCTTTGTCATTTTGGCTCACATTCTGGTTTGGTACTATCTATTATTTGCACTAGCCCAGTGATAAAATTGTGCTAATTTTTATTTATCAGTTTAGAGTTCTTCACAGACGACTGGCACATTAGCCAAAAATAATTATATGAGCTATCTGTACATTGGTCCCTTTGTCCTTTGCTTAGAGAATCACAATTGATCTGATAGGGAAGAAAGAATAACAGAGGTTGTCCTGTTTTGTTCCATTGTTAAATCAAACCCTACATATGTGGATGTGTTAACTGTGATTGCCACAAAGGTCTGCACCCATCATTAGAAGCAACCATAGATAGCCTCAAGTGTACCATCTTATCATATGAAATGAATCACACGAAAGAGGTTGAGAAGTTTGGTTTGAAATCTTAAGTGTTGTTGCTTGTTGATTCAGTTAAGGTACTTTGTTACCAGTTGTTATCCTTTGAGAGTGGATCCCTGAGAATTGTGGTCTCTGTTATTTCGAAGCATTACTGATTAACACATCACATTAGTTGATTAACTTTCTTCACAATCGTGGAAAGGACCGTCTGTCTTTGTTTTAATCATATACTACGTATATGAATCTCGTAGAAGTGATGCTTATATAGTTTCACGAATTTATGTCATTTTTCTCCGCTCATTTTGATATAGTTCTTGCTTGACTATTTGTTTATTACATCCTTCTGAGTTTTTGAGGTAGTGCTCTCTCGGCTTTTCCTTTCTGTGCATAGCGTCATTCTTTTTCTAGGGTCTCGTTTCTTTTTTGGTTCCTCAAATGGTGAAAGGATTCCGGAATCTGTTTTCTTAGCACATTTGATATTTTGGCTTGTGCCGTTGTGGAAAATGAATGAAGTCAGGCTTCCGATCCTGATAGCTATTGTAGTTGTGTTCTTGAGTTATCAAAGAGTCTTCTTTCTAAATATTGTGTAATATGTTGTACAAATATTTTTCTGACTTGTGAGAGGCTTAGTGATGAGACTTGAGTTTCTAATAATTTGTGCAAGCTAAAATTTAAGTCTTCGCCATGGTTTTGCCTTGACATCCAAGAAATGGCTGCTAGGCTATTTCTATAGGAAATCATGTAAATGAAGTAAAGAACAAAAGATAAAGGATAATCTGATGAGTAAATTTTACAATTGTGGTTTACACTTCAGGTGTTAATTTAATAATTTACTGTAATATGATTATTATGTCAATTAGATAGAAAGAATAAACGATCCGTAAGTTGCAACTGAGTGCATATCTATGCGCTAATGATTTCCTCACGCGTTAGAATCTTCTGCTTTAGGTACAAGTAGAGTACCCTGTGGTGCATGTGGAGCCATAACATGGCTTTTCAGTTATAAGTACAGACTTAAACATCTTGGTCTTTATTGATGTAATGAGATATTTTGGGTGTGTTTGGTTGTATTTTTAAAGAATGGGAAAAGGAACCCTTCCCTTATTTGTTGTGGGGGTGTTTGGTTTATTTTTTTCCCCCACTCTACCCATTTCTCCGAAATCGGATCAATCCACTATTCTGATTCCCTACCTCCCCAGTAGGATTCAAATCCCCATCCTCCTTTACTCCAATTCTGCAACCATCCATCCATTCTTCCACCAAGGCCACCATCATCACTGCAACGGCCTAGCCTCACTCCCACCTGAAACCACCTCATCAACCAACATTCCGCCCACCTTCTCGGTTCTCCCCTAACCCACCCATGTCCAAGCCCTAAATCCTCTTCCCCTGTTAATCTGCTATACAGTAACATAAGAACACAACTACACCGTTATCTCCTTCCTCTTCAGTCTTCACCTGTAAACCTCCATCGCCGCAACTAGAACATCTGCAAAATCAAGGCCCACAACTGTAAAGGGGAAAAAAGGGGTATTCCGTAAAGGTCACACTTGTTCAAAACTGGCCTCTGTATTTCACTAATGTCAGCTTAGACCTTGGGGCATTGATGTCCAGAATGTTAAGTTGGCGGTTCAATTTGGACCACTAGAGGTTGAGTTCGAGGCCTGGTGTACGATGAAACTGGTTCAACAAAAATAAAATAAAAAATTTGTTGGTTGTTGCAGCTACCAAAGAAGTTGATGGTATGTTGGCAGTTGCAATGTAGGTAATGATGGCTGGGGAAGGTAACTTGCTGACGACGGTGGAAGATGGCTACTATTTGGCGACAGCAGTAGGTAGGAGGGCAGCATAGTAGTGAAGATGGTCCTGAGGTGTGGTGGAAGTTGGAGAGAGGATGATTGAGGGGGGTTGCAAAGGTGGTACATTAGGAAATTGAAAATGGGTGATGGGAGGGTTTTGATTCTTTTCCTTTCTTTTCTCTTTGTTGATTCCATTCCCCACTTCAACTAGATGGCCACATAGTATTCGGTCATTGATCAGCATATCAGGATATCAGCCCATTCTTTAGTTGACTTGGACATCCTATTTATATTGTCATTTGATATTTATTACCTACTTATCATTATAGTTTTAAATATTTTAAAGACTCTGGTCATTTGTTGGGTTTTACTTTTGATGTTGATTTTAAAAGAGTGACTTATATTATAGATACCATATTTCTGCATGGATCCATTTAGAATATTCAACTAGTCGAAAGTGCATTAAACTGTAATATTCAACTGGCAACTTTTTTCTACAATATGCGAGTCTACAAAGGAGATTCAATCTATGGGCACTTAGTGTGATGGACCGGTGGTAGGTAAATTCATGTGTGTGGAGTTATTCCCTCATAATTTTGAAACTTGTTGACAATCATTCTGAGCTAGATTTGCCTTTTTGAGCTTGGAATATCTGCAAATAATTCAGCCAGACAAGTCTGGAATAAGTTATGCTGCAATAGTTTTATACTTCGTATATTACATCGGAGTGGCAGCCTTCTCTTGCGCGTTTTGATATCTCCACCTGCACTCTGATTATCTATGTGGTATTGTTAGAACATGTTTTTCTACTTTTTATTTGTATGACTTCTGCCACTAACTTCTCCAGTTTCGAAATTGCTTTGTCAATGAGCTTGCCAGAAGGCCCAGAACAGTGACCTTCCTAATACTGTCTACGAATGATTGATACTGGATTGTTTATGTTTATCTTCATCTTAAGTCATCACTGTCTGAAATTCTCTCTCCTCTTTTGAAGGATCTAAGCACCAATCTCACCAAGATTATCTGGAAAAAGCTGAAAAAGCTGACAAAGCGAGGAGCGCACGACTCTCTTCATCTTCATCTTCATCTAAATAGCACTCATCTTCCATTACACCTGATAAGAGATTCTCTTCGAAGGATAGCGTGCGAGCTATAGGCTTAGATGGATCGGTTGTTTACCGCATGAGTCAGTGTCTGTTTTTTTTTTTTTTTTAATAACTTGGTGCTGGATTGGATTCACAGGAACAGTGAATAGGAGAATACATTTTTTTCTTTCATCAAAAAAGAGAAAGCAAGAAACCAATCTAACTCAACTTTTTGTACTGCTCATAAACGCTTAATGATTATAAAGAAGTTTGAAGGACTCGACCATGAATTTTGTCATTTAAGGTTTACTTAATTGTTACGACTGTTGCAGAGATCCACTGAAGGTCAACCAGGAGGATGATAGTTTGATACGGAGTAATTCGGTTTGTGATCTGTTGATGAATCAGCATCGTCAATTGAAACTTGCCCAACGAACCGTTATATAATTGTCTAACTTACTGGTTAAAAGTTGCACTACTTCCAGTCCTTTGCACATCCTTACACTATAT

mRNA sequence

CGAACGACACTAACTCGGAGTTTCTCCAATTTCTTTTCCATTTTGGTGTGGTGGCATTGATTAACGACGCTAGTTTAAATTAAACCGGTTGATGAACCCTAACATTGGAGAGGAGAGCTAGTTGGGAACTCAGAGAAAATGGCAAGCGAAGGCAAACCGAACCCAAGCAGTGGAATCGGAATTGGAAATGGCAATGGAGCTGGAAATGGTGGAGGATTCAGAGGCAAAGTAAACCATTTCCTATACAGCGGAGACAAAAAGCACGTCTTCGCGGGTTTGACCATTATCACTGCTATCTTCGCCGTCCCCTGGTACTACATGAGCCGAGGATCTAAGCACCAATCTCACCAAGATTATCTGGAAAAAGCTGAAAAAGCTGACAAAGCGAGGAGCGCACGACTCTCTTCATCTTCATCTTCATCTAAATAGCACTCATCTTCCATTACACCTGATAAGAGATTCTCTTCGAAGGATAGCGTGCGAGCTATAGGCTTAGATGGATCGGTTGTTTACCGCATGAGTCAGTGTCTGTTTTTTTTTTTTTTTTAATAACTTGGTGCTGGATTGGATTCACAGGAACAGTGAATAGGAGAATACATTTTTTTCTTTCATCAAAAAAGAGAAAGCAAGAAACCAATCTAACTCAACTTTTTGTACTGCTCATAAACGCTTAATGATTATAAAGAAGTTTGAAGGACTCGACCATGAATTTTGTCATTTAAGGTTTACTTAATTGTTACGACTGTTGCAGAGATCCACTGAAGGTCAACCAGGAGGATGATAGTTTGATACGGAGTAATTCGGTTTGTGATCTGTTGATGAATCAGCATCGTCAATTGAAACTTGCCCAACGAACCGTTATATAATTGTCTAACTTACTGGTTAAAAGTTGCACTACTTCCAGTCCTTTGCACATCCTTACACTATAT

Coding sequence (CDS)

ATGGCAAGCGAAGGCAAACCGAACCCAAGCAGTGGAATCGGAATTGGAAATGGCAATGGAGCTGGAAATGGTGGAGGATTCAGAGGCAAAGTAAACCATTTCCTATACAGCGGAGACAAAAAGCACGTCTTCGCGGGTTTGACCATTATCACTGCTATCTTCGCCGTCCCCTGGTACTACATGAGCCGAGGATCTAAGCACCAATCTCACCAAGATTATCTGGAAAAAGCTGAAAAAGCTGACAAAGCGAGGAGCGCACGACTCTCTTCATCTTCATCTTCATCTAAATAG

Protein sequence

MASEGKPNPSSGIGIGNGNGAGNGGGFRGKVNHFLYSGDKKHVFAGLTIITAIFAVPWYYMSRGSKHQSHQDYLEKAEKADKARSARLSSSSSSSK

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo13537.1	Spo13537.1	mRNA

Homology

[Close]

BLAST of Spo13537.1 vs. NCBI nr
Match: gi|902184737|gb|KNA10353.1| (hypothetical protein SOVF_145110 [Spinacia oleracea])

HSP 1 Score: 183.7 bits (465), Expect = 1.500e-43
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1


		  
Query: 1  MASEGKPNPSSGIGIGNGNGAGNGGGFRGKVNHFLYSGDKKHVFAGLTIITAIFAVPWYY 60
          MASEGKPNPSSGIGIGNGNGAGNGGGFRGKVNHFLYSGDKKHVFAGLTIITAIFAVPWYY
Sbjct: 1  MASEGKPNPSSGIGIGNGNGAGNGGGFRGKVNHFLYSGDKKHVFAGLTIITAIFAVPWYY 60

Query: 61 MSRGSKHQSHQDYLEKAEKADKARSARLSSSSSSSK 97
          MSRGSKHQSHQDYLEKAEKADKARSARLSSSSSSSK
Sbjct: 61 MSRGSKHQSHQDYLEKAEKADKARSARLSSSSSSSK 96

[Close]

BLAST of Spo13537.1 vs. NCBI nr
Match: gi|731352004|ref|XP_010687316.1| (PREDICTED: uncharacterized protein LOC104901431 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 128.6 bits (322), Expect = 5.700e-27
Identity = 71/93 (76.34%), Postives = 74/93 (79.57%), Query Frame = 1


		  
Query: 1  MASEGKPNPSSGIGIGNGNGAGNGGGFRGKVNHFLYSGDKKHVFAGLTIITAIFAVPWYY 60
          MASEG PN             GNG GF+ K+NHFLYSGDKKHVFAGLTIITAIFAVPWYY
Sbjct: 1  MASEGNPNAR----------VGNGNGFKSKLNHFLYSGDKKHVFAGLTIITAIFAVPWYY 60

Query: 61 MSRGSKHQSHQDYLEKAEKADKARSARLSSSSS 94
          MSRGSKHQSHQDYL   EKADKARSARLSSSS+
Sbjct: 61 MSRGSKHQSHQDYL---EKADKARSARLSSSSA 80

[Close]

BLAST of Spo13537.1 vs. NCBI nr
Match: gi|356526274|ref|XP_003531743.1| (PREDICTED: uncharacterized protein LOC100527649 [Glycine max])

HSP 1 Score: 114.8 bits (286), Expect = 8.500e-23
Identity = 56/73 (76.71%), Postives = 66/73 (90.41%), Query Frame = 1


		  
Query: 24 GGGFRGKVNHFLYSGDKKHVFAGLTIITAIFAVPWYYMSRGSKHQSHQDYLEKAEKADKA 83
          GGGFR ++NH+LYSGDKKHVF GLT+ITA+F +PWY+MSRG+KHQSHQDYLEKA   DKA
Sbjct: 8  GGGFRSRLNHYLYSGDKKHVFVGLTLITAVFTIPWYFMSRGTKHQSHQDYLEKA---DKA 67

Query: 84 RSARLSSSSSSSK 97
          RS RLSSSS+S+K
Sbjct: 68 RSQRLSSSSASAK 77

[Close]

BLAST of Spo13537.1 vs. NCBI nr
Match: gi|593267322|ref|XP_007135839.1| (hypothetical protein PHAVU_010G162500g [Phaseolus vulgaris])

HSP 1 Score: 112.8 bits (281), Expect = 3.200e-22
Identity = 59/79 (74.68%), Postives = 69/79 (87.34%), Query Frame = 1


		  
Query: 19 NGAGNGGG-FRGKVNHFLYSGDKKHVFAGLTIITAIFAVPWYYMSRGSKHQSHQDYLEKA 78
          NG GNGGG FR KVNH+L+SG+KKHVF GLT+ITA+F +PW+ M+RGSKHQSHQDYL   
Sbjct: 8  NGGGNGGGGFRSKVNHYLHSGEKKHVFVGLTLITAVFTIPWFLMNRGSKHQSHQDYL--- 67

Query: 79 EKADKARSARLSSSSSSSK 97
          EKADKARS RLSSSS+S+K
Sbjct: 68 EKADKARSERLSSSSASAK 83

[Close]

BLAST of Spo13537.1 vs. NCBI nr
Match: gi|951034622|ref|XP_014516077.1| (PREDICTED: uncharacterized protein LOC106773833 [Vigna radiata var. radiata])

HSP 1 Score: 112.5 bits (280), Expect = 4.200e-22
Identity = 62/96 (64.58%), Postives = 75/96 (78.12%), Query Frame = 1


		  
Query: 1  MASEGKPNPSSGIGIGNGNGAGNGGGFRGKVNHFLYSGDKKHVFAGLTIITAIFAVPWYY 60
          M+S+ KPN          +G   GGGFR KVN +L+SGDKKHVF GLT+ITA+F+VPW++
Sbjct: 1  MSSDAKPN----------SGGNVGGGFRSKVNFYLHSGDKKHVFIGLTLITAVFSVPWFF 60

Query: 61 MSRGSKHQSHQDYLEKAEKADKARSARLSSSSSSSK 97
          M+RGSKHQSHQDYL   EKADKARS RLSSSS+S+K
Sbjct: 61 MNRGSKHQSHQDYL---EKADKARSERLSSSSASAK 83

[Close]

BLAST of Spo13537.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QUG0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_145110 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.000e-43
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1


		  
Query: 1  MASEGKPNPSSGIGIGNGNGAGNGGGFRGKVNHFLYSGDKKHVFAGLTIITAIFAVPWYY 60
          MASEGKPNPSSGIGIGNGNGAGNGGGFRGKVNHFLYSGDKKHVFAGLTIITAIFAVPWYY
Sbjct: 1  MASEGKPNPSSGIGIGNGNGAGNGGGFRGKVNHFLYSGDKKHVFAGLTIITAIFAVPWYY 60

Query: 61 MSRGSKHQSHQDYLEKAEKADKARSARLSSSSSSSK 97
          MSRGSKHQSHQDYLEKAEKADKARSARLSSSSSSSK
Sbjct: 61 MSRGSKHQSHQDYLEKAEKADKARSARLSSSSSSSK 96

[Close]

BLAST of Spo13537.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BV36_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g189330 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.000e-27
Identity = 71/93 (76.34%), Postives = 74/93 (79.57%), Query Frame = 1


		  
Query: 1  MASEGKPNPSSGIGIGNGNGAGNGGGFRGKVNHFLYSGDKKHVFAGLTIITAIFAVPWYY 60
          MASEG PN             GNG GF+ K+NHFLYSGDKKHVFAGLTIITAIFAVPWYY
Sbjct: 1  MASEGNPNAR----------VGNGNGFKSKLNHFLYSGDKKHVFAGLTIITAIFAVPWYY 60

Query: 61 MSRGSKHQSHQDYLEKAEKADKARSARLSSSSS 94
          MSRGSKHQSHQDYL   EKADKARSARLSSSS+
Sbjct: 61 MSRGSKHQSHQDYL---EKADKARSARLSSSSA 80

[Close]

BLAST of Spo13537.1 vs. UniProtKB/TrEMBL
Match: C6T4Z8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G219900 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 5.900e-23
Identity = 56/73 (76.71%), Postives = 66/73 (90.41%), Query Frame = 1


		  
Query: 24 GGGFRGKVNHFLYSGDKKHVFAGLTIITAIFAVPWYYMSRGSKHQSHQDYLEKAEKADKA 83
          GGGFR ++NH+LYSGDKKHVF GLT+ITA+F +PWY+MSRG+KHQSHQDYLEKA   DKA
Sbjct: 8  GGGFRSRLNHYLYSGDKKHVFVGLTLITAVFTIPWYFMSRGTKHQSHQDYLEKA---DKA 67

Query: 84 RSARLSSSSSSSK 97
          RS RLSSSS+S+K
Sbjct: 68 RSQRLSSSSASAK 77

[Close]

BLAST of Spo13537.1 vs. UniProtKB/TrEMBL
Match: V7ATA6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G162500g PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.300e-22
Identity = 59/79 (74.68%), Postives = 69/79 (87.34%), Query Frame = 1


		  
Query: 19 NGAGNGGG-FRGKVNHFLYSGDKKHVFAGLTIITAIFAVPWYYMSRGSKHQSHQDYLEKA 78
          NG GNGGG FR KVNH+L+SG+KKHVF GLT+ITA+F +PW+ M+RGSKHQSHQDYL   
Sbjct: 8  NGGGNGGGGFRSKVNHYLHSGEKKHVFVGLTLITAVFTIPWFLMNRGSKHQSHQDYL--- 67

Query: 79 EKADKARSARLSSSSSSSK 97
          EKADKARS RLSSSS+S+K
Sbjct: 68 EKADKARSERLSSSSASAK 83

[Close]

BLAST of Spo13537.1 vs. UniProtKB/TrEMBL
Match: A0A0S3T0E6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G231300 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 3.800e-22
Identity = 61/96 (63.54%), Postives = 75/96 (78.12%), Query Frame = 1


		  
Query: 1  MASEGKPNPSSGIGIGNGNGAGNGGGFRGKVNHFLYSGDKKHVFAGLTIITAIFAVPWYY 60
          M+S+ KPN          +G   GGGFR KVN +L+SGDK+HVF GLT+ITA+F+VPW++
Sbjct: 1  MSSDAKPN----------SGCNAGGGFRSKVNFYLHSGDKRHVFVGLTLITAVFSVPWFF 60

Query: 61 MSRGSKHQSHQDYLEKAEKADKARSARLSSSSSSSK 97
          M+RGSKHQSHQDYL   EKADKARS RLSSSS+S+K
Sbjct: 61 MNRGSKHQSHQDYL---EKADKARSERLSSSSASAK 83

[Close]

BLAST of Spo13537.1 vs. TAIR (Arabidopsis)
Match: AT1G80890.1 (unknown protein)

HSP 1 Score: 98.6 bits (244), Expect = 2.200e-21
Identity = 50/73 (68.49%), Postives = 60/73 (82.19%), Query Frame = 1


		  
Query: 24 GGGFRGKVNHFLYSGDKKHVFAGLTIITAIFAVPWYYMSRGSKHQSHQDYLEKAEKADKA 83
          GGG R K+ H++YSG+KKHV AG+ II+ IF +PWY M++GSKH+SHQDYLEKA   DKA
Sbjct: 11 GGGIRAKMEHYVYSGEKKHVLAGIGIISIIFGIPWYLMNQGSKHRSHQDYLEKA---DKA 70

Query: 84 RSARLSSSSSSSK 97
          R ARLSSSSSS K
Sbjct: 71 RKARLSSSSSSDK 80

[Close]

BLAST of Spo13537.1 vs. TAIR (Arabidopsis)
Match: AT1G16000.1 (unknown protein)

HSP 1 Score: 95.5 bits (236), Expect = 1.900e-20
Identity = 54/96 (56.25%), Postives = 67/96 (69.79%), Query Frame = 1


		  
Query: 1  MASEGKPNPSSGIGIGNGNGAGNGGGFRGKVNHFLYSGDKKHVFAGLTIITAIFAVPWYY 60
          M +E K N       G       GGGFR K+ H++YSG+KKHV  G+ I+T IF VPWY 
Sbjct: 1  MGNETKTN-------GGPASMAGGGGFRAKMEHYVYSGEKKHVLVGIGIVTIIFGVPWYL 60

Query: 61 MSRGSKHQSHQDYLEKAEKADKARSARLSSSSSSSK 97
          M++GSKHQSHQDY+   +KADKAR ARLSSSSS++K
Sbjct: 61 MTQGSKHQSHQDYM---DKADKARKARLSSSSSANK 86

The following BLAST results are available for this feature:

BLAST of Spo13537.1 vs. NCBI nr
BLAST of Spo13537.1 vs. UniProtKB/TrEMBL
BLAST of Spo13537.1 vs. ExPASy Swiss-Prot
BLAST of Spo13537.1 vs. TAIR (Arabidopsis)

BLAST of Spo13537.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902184737\|gb\|KNA10353.1\|	1.5e-43	100.	hypothetical protein SOVF_1451...	[more]
gi\|731352004\|ref\|XP_010687316.1\|	5.7e-27	76.3	PREDICTED: uncharacterized pro...	[more]
gi\|356526274\|ref\|XP_003531743.1\|	8.5e-23	76.7	PREDICTED: uncharacterized pro...	[more]
gi\|593267322\|ref\|XP_007135839.1\|	3.2e-22	74.6	hypothetical protein PHAVU_010...	[more]
gi\|951034622\|ref\|XP_014516077.1\|	4.2e-22	64.5	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo13537.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QUG0_SPIOL	1.0e-43	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BV36_BETVU	4.0e-27	76.3	Uncharacterized protein OS=Bet...	[more]
C6T4Z8_SOYBN	5.9e-23	76.7	Uncharacterized protein OS=Gly...	[more]
V7ATA6_PHAVU	2.3e-22	74.6	Uncharacterized protein OS=Pha...	[more]
A0A0S3T0E6_PHAAN	3.8e-22	63.5	Uncharacterized protein OS=Vig...	[more]

BLAST of Spo13537.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo13537.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G80890.1	2.2e-21	68.4	unknown protein	[more]
AT1G16000.1	1.9e-20	56.2	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35990	FAMILY NOT NAMED	coord: 21..96 score: 1.7
None	No IPR available	PANTHER	PTHR35990:SF1	GAG1AT PROTEIN	coord: 21..96 score: 1.7

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0001510	RNA methylation
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
biological_process	GO:0000338	protein deneddylation
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0006457	protein folding
biological_process	GO:0034968	histone lysine methylation
biological_process	GO:0009640	photomorphogenesis
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0016020	membrane
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0005524	ATP binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo16627	0.69	Barchart \| Table
Spo02380	0.67	Barchart \| Table
Spo09819	0.67	Barchart \| Table
Spo13856	0.66	Barchart \| Table
Spo25954	0.66	Barchart \| Table
Spo06589	0.66	Barchart \| Table
Spo05589	0.66	Barchart \| Table
Spo08905	0.65	Barchart \| Table
Spo05849	0.65	Barchart \| Table
Spo18103	0.65	Barchart \| Table