Spo13530 (gene)

Overview
NameSpo13530
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr2 : 36028500 .. 36031251 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTTTATGTGAGTTTATACTCAAATAAACTAGGAAATGCAATAATGGAGTGATCTTTGAAGGGATTCCACTCTTGAAATTCCCTTCAAATGATCTTCCATACTCCATTTTCAAGTTCAAAGCTTCAGTCTTTACTACTTATTTTCGAAAATAATGATTAGTAAATGAGATTTCACTTTTGAAAATAATCTTTACAACAATCATCATACAATTCTTACAAAAAACCAAACTTTTGCAAATGTTCAAGGATGTTAACCAAAGAGTCATATATGTGACTACGGTCAAGTTAGAAAACAACTTGACATAACTCATTTGTCAACATTGTGGCATTTTACAAGGGTCTATCATTACTTGATAATAGGCACTTGTCAAGGATGCAAATGCTCATAGCCACAACCAAAACGTTAATGTAGAGGTATATAAGTAGAAAATGTAAAGAAAGAGTCAATGGTCTAGTGGAGCATAATCTTTTTGCTTGTGGATGATACATACCTCGATGATAACATAATTACGCACACAAAAATATAGTATTCCTTATTTCCTTTGTCTTCGTAAGCACACAAACTTGTATCGTAAATCAAATCAAAAATCTCTCTTTTTTCCTCCCTTTCGTCTTCTATATTCGTGTGAATCAACCAACCAGCCAACCCCACAACACCACCATCTCTTTTTATTTCTTTCACAACGCCTTTATTTCCATCGCCTCATTCTCTCCCCAACCCCAACCTTACCAAAAACTCCCTCTTTTCTCTCTCCTCTTTCAACCGCATGGTAACCGTCTGATTAAACTCTTCATCCATTTTCGATTTTTCAGCTTCAGAATTAAGGTTTGATTTTTAGTTGCATCTTGATCATCTTCCATTTCTGATTATTCTTATTTTTTTCTATGAATTTATGTTGCCCGATCATTTTTCTTTTTTTTAATGTTGTTTTATCTTAATTTTGTTTGATGATCGTTTTTATTTGACGGTGTAATTTTTTTTATTTGGTTTTATGTTGTGATCGTACCTTATGTTAAATTTTCATTACTTTTGTTGTGTTTTTCTGATGATCGTAGCTTTTAATTTGGTTTTTAGTGAATTATTGAACCCAAGTTATGAAAATTGAAATTCTCCAAGAAAAAGGGGATGATCCTGTATTTCAGGTATTGGTCGGTTATACTGATCGTTATTACTTATTAGTTTGATGAAGTAAATTAGTAATTTGGTGATTGCTTATTCAGGGTTATTATTGTTAGAAGCAGATTCCTTATAGTGTCTTGTTAGTACGCAATTACATGTAAACTCAGCTTTTACTGACTGTGAGTTGGATGGTTGTGTGATTTAACAGAGGTTTTGTAGCTCGCAGTCAGCAAGATTAATAGCAGGATTAGTATTCGGTGGTTGTGCAGTAGTTTTATAGGCTGGAAGGTGCAGTGTAGTGAGTTTCTGTTTGCAGGCGTGTGTATTAGAGAGGGAGAGAGGCGCAGTTTTTTTTATAGGTAGGCTGGAAGGTGCAGTGTAGTGAGTTTCTGTTTGCAGGCGTGTGTATTAGAGAGGGAGAGAGGCGCAGTTTTTTTATAGGTAGGAGAAGACGGGAGATGTAATGCTATTTTCCAAGAACTGATCACTACTGAGTAGCTCAAACCTTTAACTAGTCTAGGCTAATGTTCCTCCTATCGAGGGCTTATATGAAAACAGCTTTTACTTCAATTTGATCCCTCTTGCGGTATTTCCCACTCAACGTGGGAGCTTCCGTTGAGGCAAAGACTAGGAATAAGAAGCTGCAGAAGGTGTTTTGTTGCTATTCCGGGAGCTTTGGCTACTTGTTATTTGTTATGGAGGGGTAGTAGGTTTGCTAATTCCCTTTTTATCAAGGGCTTATATGAAAGTTGCCATTACCTTGAAATTTCCGGCCCTCTTGCTCACCAAAGGTGGGAGCCAACAGAATCAGGAAGTACCACTAGGGTGACTAGCAATAAGTAGCTTCAAAAGGTGTTAGTTGTAAGTTTTTAGTATAGATTGTTTGGGTTGAGGATGTGTCTTTTGATTTCATTATACTGTTATAATTTCTTAGGTATAAGGTTTAGTTATTACTTCCTCTATTTTTTTTCACTTGCACCAACTTCTTTTTATGGAAGTTGCATATTAGATTATTTGTTGCACCATTTCCTTTTATGGTATGTTTTCACATGCTTTTCGGTGTGTTTACACACTAAATACCCACTTTATCCTTACCCACATTTACCATTGTTACGTAACCTTCTCCCTCTCTTTTGTTTTTTTATATATGAGAGATTTTAATATTTACAATTTTTCTTAATCTTTGTGCCTAACAAATGGTGCAAGTAAGAATAAACAGAGGAAGTAGTAGCTTCATACCGTGTATTGCTGGAATGCAATGGTTTATTTTGTAAGTATCTAGAACCTAGCTGTTTCATTGACTTGGAAAGAAGCATTGATGTTTTATATTAATGTCATAATAATTCAGTAGATGCCTCCAAAAACTTTTGTACAAGTAAATAGGAGAATAGACTTGTTATTTTAAAGTCTTTCGTGACTTGTCTTAACTTTCAAGGATAAACCCTTTCTAGTTGATATTAAGAGGGGTAGCAGAAGGTTTTAAAATGTCTACGAAAAGTTTGGATCGCCAAATAGTAAGTCTGACTACTATGTGCTAATTATCTATTATCTTATTGCAGAGAAGCTTTTCCAAATGGACCTTTTACCAATGTTCTAAACATTGGACCTTTATCCCCCAATTCTCATAA

mRNA sequence

ATGATGTTTATCACACAAACTTGTATCGTAAATCAAATCAAAAATCTCTCTTTTTTCCTCCCTTTCGTCTTCTATATTCGTGTGAATCAACCAACCAGCCAACCCCACAACACCACCATCTCTTTTTATTTCTTTCACAACGCCTTTATTTCCATCGCCTCATTCTCTCCCCAACCCCAACCTTACCAAAAACTCCCTCTTTTCTCTCTCCTCTTTCAACCGCATGGTAACCGTCTGATTAAACTCTTCATCCATTTTCGATTTTTCAGCTTCAGAATTAAGAGAAGCTTTTCCAAATGGACCTTTTACCAATGTTCTAAACATTGGACCTTTATCCCCCAATTCTCATAA

Coding sequence (CDS)

ATGATGTTTATCACACAAACTTGTATCGTAAATCAAATCAAAAATCTCTCTTTTTTCCTCCCTTTCGTCTTCTATATTCGTGTGAATCAACCAACCAGCCAACCCCACAACACCACCATCTCTTTTTATTTCTTTCACAACGCCTTTATTTCCATCGCCTCATTCTCTCCCCAACCCCAACCTTACCAAAAACTCCCTCTTTTCTCTCTCCTCTTTCAACCGCATGGTAACCGTCTGATTAAACTCTTCATCCATTTTCGATTTTTCAGCTTCAGAATTAAGAGAAGCTTTTCCAAATGGACCTTTTACCAATGTTCTAAACATTGGACCTTTATCCCCCAATTCTCATAA

Protein sequence

MMFITQTCIVNQIKNLSFFLPFVFYIRVNQPTSQPHNTTISFYFFHNAFISIASFSPQPQPYQKLPLFSLLFQPHGNRLIKLFIHFRFFSFRIKRSFSKWTFYQCSKHWTFIPQFS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo13530.1Spo13530.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo13530.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo13530.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo13530.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo13530.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009409 response to cold
biological_process GO:0010260 animal organ senescence
biological_process GO:0006598 polyamine catabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006629 lipid metabolic process
biological_process GO:0010048 vernalization response
biological_process GO:0009414 response to water deprivation
biological_process GO:0042908 xenobiotic transport
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0000023 maltose metabolic process
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0008152 metabolic process
biological_process GO:0006508 proteolysis
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009737 response to abscisic acid
cellular_component GO:0005777 peroxisome
cellular_component GO:0016020 membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009507 chloroplast
molecular_function GO:0008375 acetylglucosaminyltransferase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0008081 phosphoric diester hydrolase activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008131 primary amine oxidase activity
molecular_function GO:0046592 polyamine oxidase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008559 xenobiotic transmembrane transporting ATPase activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATPase activity
RNA-Seq Expression