Spo13198 (gene) | SpinachBase

Overview


Name	Spo13198
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Unknown protein
Location	chr3 : 10579134 .. 10579682 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCACCACCGGAAACCACTCTCTCTCCTCCCCATCCTCCTCCTCCTCCTCCTCAACATCCTCCCTCTCACCACCGCAAACTTCCGTGTTGTCGCCAACTACGAAGTCGCTTGCACAATGTGCAACACATGTCAACCGTGCAACCCTTACCCTTCCTCAACCCCACCACCTCCATCTCCTCCTCCGCCGTCTCCACCACCTCCGGCCACCACCACTGCTGGTTGTCCTCCTCCACCATCACAACCATCCAGCGGCGGCGGTGGTACTAGTGGGAGTTACTACTACTCATCTCCTCCTCCGCCTTCTCAGCCTTCTTATGTCTACCCACCACCTAGTGGCGGCGGTGGAAGCAGCGGAGGAGGAGGTTACTACTACGCGCCGCCGTATCATTACGGTCCAGCGCCACCCCCTCCTAATCCGATCGTTCCTTATTTCCCATATTACTACCATTCCCCTCCTCCGAGAAATACCGGTTCTACCCTTTTTAGAAATTCCATTTTTTGTTCATTTTTATTGCCTCTATTTTTCTCCTTCTTTTTCCTATAA

mRNA sequence

ATGGAGCACCACCGGAAACCACTCTCTCTCCTCCCCATCCTCCTCCTCCTCCTCCTCAACATCCTCCCTCTCACCACCGCAAACTTCCGTGTTGTCGCCAACTACGAAGTCGCTTGCACAATGTGCAACACATGTCAACCGTGCAACCCTTACCCTTCCTCAACCCCACCACCTCCATCTCCTCCTCCGCCGTCTCCACCACCTCCGGCCACCACCACTGCTGGTTGTCCTCCTCCACCATCACAACCATCCAGCGGCGGCGGTGGTACTAGTGGGAGTTACTACTACTCATCTCCTCCTCCGCCTTCTCAGCCTTCTTATGTCTACCCACCACCTAGTGGCGGCGGTGGAAGCAGCGGAGGAGGAGGTTACTACTACGCGCCGCCGTATCATTACGGTCCAGCGCCACCCCCTCCTAATCCGATCGTTCCTTATTTCCCATATTACTACCATTCCCCTCCTCCGAGAAATACCGGTTCTACCCTTTTTAGAAATTCCATTTTTTGTTCATTTTTATTGCCTCTATTTTTCTCCTTCTTTTTCCTATAA

Coding sequence (CDS)

ATGGAGCACCACCGGAAACCACTCTCTCTCCTCCCCATCCTCCTCCTCCTCCTCCTCAACATCCTCCCTCTCACCACCGCAAACTTCCGTGTTGTCGCCAACTACGAAGTCGCTTGCACAATGTGCAACACATGTCAACCGTGCAACCCTTACCCTTCCTCAACCCCACCACCTCCATCTCCTCCTCCGCCGTCTCCACCACCTCCGGCCACCACCACTGCTGGTTGTCCTCCTCCACCATCACAACCATCCAGCGGCGGCGGTGGTACTAGTGGGAGTTACTACTACTCATCTCCTCCTCCGCCTTCTCAGCCTTCTTATGTCTACCCACCACCTAGTGGCGGCGGTGGAAGCAGCGGAGGAGGAGGTTACTACTACGCGCCGCCGTATCATTACGGTCCAGCGCCACCCCCTCCTAATCCGATCGTTCCTTATTTCCCATATTACTACCATTCCCCTCCTCCGAGAAATACCGGTTCTACCCTTTTTAGAAATTCCATTTTTTGTTCATTTTTATTGCCTCTATTTTTCTCCTTCTTTTTCCTATAA

Protein sequence

MEHHRKPLSLLPILLLLLLNILPLTTANFRVVANYEVACTMCNTCQPCNPYPSSTPPPPSPPPPSPPPPATTTAGCPPPPSQPSSGGGGTSGSYYYSSPPPPSQPSYVYPPPSGGGGSSGGGGYYYAPPYHYGPAPPPPNPIVPYFPYYYHSPPPRNTGSTLFRNSIFCSFLLPLFFSFFFL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo13198.1	Spo13198.1	mRNA

Homology

[Close]

BLAST of Spo13198.1 vs. NCBI nr
Match: gi|902229762|gb|KNA21593.1| (hypothetical protein SOVF_041740 [Spinacia oleracea])

HSP 1 Score: 349.7 bits (896), Expect = 3.000e-93
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1


		  
Query: 1   MEHHRKPLSLLPILLLLLLNILPLTTANFRVVANYEVACTMCNTCQPCNPYPSSTPPPPS 60
           MEHHRKPLSLLPILLLLLLNILPLTTANFRVVANYEVACTMCNTCQPCNPYPSSTPPPPS
Sbjct: 1   MEHHRKPLSLLPILLLLLLNILPLTTANFRVVANYEVACTMCNTCQPCNPYPSSTPPPPS 60

Query: 61  PPPPSPPPPATTTAGCPPPPSQPSSGGGGTSGSYYYSSPPPPSQPSYVYPPPSGGGGSSG 120
           PPPPSPPPPATTTAGCPPPPSQPSSGGGGTSGSYYYSSPPPPSQPSYVYPPPSGGGGSSG
Sbjct: 61  PPPPSPPPPATTTAGCPPPPSQPSSGGGGTSGSYYYSSPPPPSQPSYVYPPPSGGGGSSG 120

Query: 121 GGGYYYAPPYHYGPAPPPPNPIVPYFPYYYHSPPPRNTGSTLFRNSIFCSFLLPLFFSFF 180
           GGGYYYAPPYHYGPAPPPPNPIVPYFPYYYHSPPPRNTGSTLFRNSIFCSFLLPLFFSFF
Sbjct: 121 GGGYYYAPPYHYGPAPPPPNPIVPYFPYYYHSPPPRNTGSTLFRNSIFCSFLLPLFFSFF 180

Query: 181 FL 183
           FL
Sbjct: 181 FL 182

[Close]

BLAST of Spo13198.1 vs. NCBI nr
Match: gi|731321157|ref|XP_010671197.1| (PREDICTED: leucine-rich repeat extensin-like protein 3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 251.5 bits (641), Expect = 1.100e-63
Identity = 142/181 (78.45%), Postives = 154/181 (85.08%), Query Frame = 1


		  
Query: 1   MEHHRKPLSLLPILLLLLLNILPLTTANFRVVANYEVACTMCNTCQPCNPYPSSTPPPPS 60
           ME HR+ L   P+L LLLLN+L LT+ANFR+  NYEVACTMC+TCQPCNP P+ +PPPPS
Sbjct: 1   MEIHRQTL---PLLSLLLLNLLALTSANFRLAKNYEVACTMCDTCQPCNP-PTYSPPPPS 60

Query: 61  PPPPSPPPPATTTAGCPPPPSQPSSGGGGTSGSYYYSSPPPPSQPSYVYPPPS-GGGGSS 120
           PPPPS PPPA TT GCPPPP+ PS+GGGG SGSYYYSSPPPPSQPSYVYPPPS GGGG  
Sbjct: 61  PPPPSQPPPA-TTVGCPPPPAPPSTGGGGGSGSYYYSSPPPPSQPSYVYPPPSTGGGGGG 120

Query: 121 GGGGYYYAPPYHYGPAPPPPNPIVPYFPYYYHSPPPRNTGSTLFRNSIFCSFLLPLFFSF 180
           GGGGYYYAPPYHYGPAPPPPNPIVPYFP+YYH+PPP N GSTL RNSIF S L PL F F
Sbjct: 121 GGGGYYYAPPYHYGPAPPPPNPIVPYFPFYYHTPPPGNYGSTLGRNSIFSSILFPLLFFF 176

[Close]

BLAST of Spo13198.1 vs. NCBI nr
Match: gi|567852555|ref|XP_006419441.1| (hypothetical protein CICLE_v10005954mg [Citrus clementina])

HSP 1 Score: 135.2 bits (339), Expect = 1.200e-28
Identity = 86/145 (59.31%), Postives = 100/145 (68.97%), Query Frame = 1


		  
Query: 24  LTTANFRVVANYEVACTMCNTCQ-PCNPYPSSTPPPPSPPPPSPPPPATTTAGCPPPPSQ 83
           +TT      A Y++ CTMC++C  PC P PS  PP PSPPPPSPPP A+++  CPPPPS 
Sbjct: 28  VTTTTTTTTAKYQIECTMCSSCDNPCQPDPSPPPPSPSPPPPSPPP-ASSSPNCPPPPSP 87

Query: 84  PSSGGGGTSGSYYYSSPPPPSQPSYVY---PPPSGGGGSSGG--GGYYYAPPYHYG-PAP 143
           PSS GGG+ GSYYY SPPPPS PS  Y   PPPS G G+  G  GG Y+ PP     P P
Sbjct: 88  PSSSGGGSGGSYYY-SPPPPSSPSSSYSSPPPPSNGNGNGNGGIGGLYFPPPNRGNYPTP 147

Query: 144 PPPNPIVPYFPYYYHSPPPRNTGST 162
           PPPNPIVPYFPYYY+SPPP +  S+
Sbjct: 148 PPPNPIVPYFPYYYYSPPPPSKSSS 170

[Close]

BLAST of Spo13198.1 vs. NCBI nr
Match: gi|729458428|ref|XP_010524723.1| (PREDICTED: formin-B-like [Tarenaya hassleriana])

HSP 1 Score: 131.0 bits (328), Expect = 2.200e-27
Identity = 91/162 (56.17%), Postives = 101/162 (62.35%), Query Frame = 1


		  
Query: 10  LLPILLLLLLNILPLTTANFRVVANYEVACTMCNTCQ-PCNPYPSSTPPPPSPPPPSPPP 69
           LL   LL+LL  LPL+  +    +  +V+CTMC +C  PCNP PS         PP PPP
Sbjct: 9   LLSAALLILLLSLPLSVTSAVTSSKEQVSCTMCTSCDNPCNPNPS---------PPPPPP 68

Query: 70  PATTTAGCPPPPSQPSSGGGGTSGSYYYSSPPPPSQPSYVYPPPSGGGGSSGGGGYYYAP 129
           PA TTA CPPPPS PSS GGG     YY SPPPPSQ    YPPP   GG  GG GYYY P
Sbjct: 69  PAITTAACPPPPSPPSSSGGG-----YYYSPPPPSQSGNKYPPPPPYGG--GGDGYYYPP 128

Query: 130 PYHYG--PAPPPPNPIVPYFPYYYHSPPPRNTGSTLFRNSIF 169
           PY YG  P PPPPNPIVPYFP+YYH PPP  +GS      +F
Sbjct: 129 PY-YGNYPTPPPPNPIVPYFPFYYHIPPPAASGSDRISGLLF 153

[Close]

BLAST of Spo13198.1 vs. NCBI nr
Match: gi|359477137|ref|XP_002271531.2| (PREDICTED: leucine-rich repeat extensin-like protein 3 [Vitis vinifera])

HSP 1 Score: 129.8 bits (325), Expect = 4.800e-27
Identity = 89/186 (47.85%), Postives = 122/186 (65.59%), Query Frame = 1


		  
Query: 1   MEHHRKPLSLLPILLLLLLNILPL-TTANFRVVANYEVACTMCNTCQ-PCNPYPSSTPPP 60
           ME  R+   LL + + +++       TA+    + Y++ CTMC+ C  PCN  PS  PP 
Sbjct: 1   MERPRRVRMLLFVAVFMVVQRQSWPATADVAAKSKYQIECTMCSACDNPCNQVPSPPPPN 60

Query: 61  PSPPPPSPPPPATTTAGCPPPPSQPSSGGGGTSGSYYYSSPPPPSQPSYVY---PPPSGG 120
           PSPPPPSPPPP++++  CPPPPS PS+       +YYYS PPPPSQP+YVY   PPP+G 
Sbjct: 61  PSPPPPSPPPPSSSS-NCPPPPSPPSNP------TYYYS-PPPPSQPTYVYSSPPPPNGY 120

Query: 121 GGSSGGGGYYYAPPYHYGPAPPPPNPIVPYFPYYYHSPPPRNTGSTLF--RNSIFCSFLL 180
            G  GGGG +Y PPY   PAPPPPNPIVPYFP++YH+PPP +  ++++   ++++   L+
Sbjct: 121 NGGGGGGGAFYPPPYQNYPAPPPPNPIVPYFPFWYHTPPPTSAANSVYFSDSTVYTIALI 178

[Close]

BLAST of Spo13198.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQ38_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_041740 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 2.100e-93
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1


		  
Query: 1   MEHHRKPLSLLPILLLLLLNILPLTTANFRVVANYEVACTMCNTCQPCNPYPSSTPPPPS 60
           MEHHRKPLSLLPILLLLLLNILPLTTANFRVVANYEVACTMCNTCQPCNPYPSSTPPPPS
Sbjct: 1   MEHHRKPLSLLPILLLLLLNILPLTTANFRVVANYEVACTMCNTCQPCNPYPSSTPPPPS 60

Query: 61  PPPPSPPPPATTTAGCPPPPSQPSSGGGGTSGSYYYSSPPPPSQPSYVYPPPSGGGGSSG 120
           PPPPSPPPPATTTAGCPPPPSQPSSGGGGTSGSYYYSSPPPPSQPSYVYPPPSGGGGSSG
Sbjct: 61  PPPPSPPPPATTTAGCPPPPSQPSSGGGGTSGSYYYSSPPPPSQPSYVYPPPSGGGGSSG 120

Query: 121 GGGYYYAPPYHYGPAPPPPNPIVPYFPYYYHSPPPRNTGSTLFRNSIFCSFLLPLFFSFF 180
           GGGYYYAPPYHYGPAPPPPNPIVPYFPYYYHSPPPRNTGSTLFRNSIFCSFLLPLFFSFF
Sbjct: 121 GGGYYYAPPYHYGPAPPPPNPIVPYFPYYYHSPPPRNTGSTLFRNSIFCSFLLPLFFSFF 180

Query: 181 FL 183
           FL
Sbjct: 181 FL 182

[Close]

BLAST of Spo13198.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CWQ7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g048060 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 7.700e-64
Identity = 142/181 (78.45%), Postives = 154/181 (85.08%), Query Frame = 1


		  
Query: 1   MEHHRKPLSLLPILLLLLLNILPLTTANFRVVANYEVACTMCNTCQPCNPYPSSTPPPPS 60
           ME HR+ L   P+L LLLLN+L LT+ANFR+  NYEVACTMC+TCQPCNP P+ +PPPPS
Sbjct: 1   MEIHRQTL---PLLSLLLLNLLALTSANFRLAKNYEVACTMCDTCQPCNP-PTYSPPPPS 60

Query: 61  PPPPSPPPPATTTAGCPPPPSQPSSGGGGTSGSYYYSSPPPPSQPSYVYPPPS-GGGGSS 120
           PPPPS PPPA TT GCPPPP+ PS+GGGG SGSYYYSSPPPPSQPSYVYPPPS GGGG  
Sbjct: 61  PPPPSQPPPA-TTVGCPPPPAPPSTGGGGGSGSYYYSSPPPPSQPSYVYPPPSTGGGGGG 120

Query: 121 GGGGYYYAPPYHYGPAPPPPNPIVPYFPYYYHSPPPRNTGSTLFRNSIFCSFLLPLFFSF 180
           GGGGYYYAPPYHYGPAPPPPNPIVPYFP+YYH+PPP N GSTL RNSIF S L PL F F
Sbjct: 121 GGGGYYYAPPYHYGPAPPPPNPIVPYFPFYYHTPPPGNYGSTLGRNSIFSSILFPLLFFF 176

[Close]

BLAST of Spo13198.1 vs. UniProtKB/TrEMBL
Match: V4S724_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005954mg PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 8.000e-29
Identity = 86/145 (59.31%), Postives = 100/145 (68.97%), Query Frame = 1


		  
Query: 24  LTTANFRVVANYEVACTMCNTCQ-PCNPYPSSTPPPPSPPPPSPPPPATTTAGCPPPPSQ 83
           +TT      A Y++ CTMC++C  PC P PS  PP PSPPPPSPPP A+++  CPPPPS 
Sbjct: 28  VTTTTTTTTAKYQIECTMCSSCDNPCQPDPSPPPPSPSPPPPSPPP-ASSSPNCPPPPSP 87

Query: 84  PSSGGGGTSGSYYYSSPPPPSQPSYVY---PPPSGGGGSSGG--GGYYYAPPYHYG-PAP 143
           PSS GGG+ GSYYY SPPPPS PS  Y   PPPS G G+  G  GG Y+ PP     P P
Sbjct: 88  PSSSGGGSGGSYYY-SPPPPSSPSSSYSSPPPPSNGNGNGNGGIGGLYFPPPNRGNYPTP 147

Query: 144 PPPNPIVPYFPYYYHSPPPRNTGST 162
           PPPNPIVPYFPYYY+SPPP +  S+
Sbjct: 148 PPPNPIVPYFPYYYYSPPPPSKSSS 170

[Close]

BLAST of Spo13198.1 vs. UniProtKB/TrEMBL
Match: F6H6U0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01460 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.400e-27
Identity = 85/168 (50.60%), Postives = 113/168 (67.26%), Query Frame = 1


		  
Query: 1   MEHHRKPLSLLPILLLLLLNILPL-TTANFRVVANYEVACTMCNTCQ-PCNPYPSSTPPP 60
           ME  R+   LL + + +++       TA+    + Y++ CTMC+ C  PCN  PS  PP 
Sbjct: 1   MERPRRVRMLLFVAVFMVVQRQSWPATADVAAKSKYQIECTMCSACDNPCNQVPSPPPPN 60

Query: 61  PSPPPPSPPPPATTTAGCPPPPSQPSSGGGGTSGSYYYSSPPPPSQPSYVY---PPPSGG 120
           PSPPPPSPPPP++++  CPPPPS PS+       +YYYS PPPPSQP+YVY   PPP+G 
Sbjct: 61  PSPPPPSPPPPSSSS-NCPPPPSPPSNP------TYYYS-PPPPSQPTYVYSSPPPPNGY 120

Query: 121 GGSSGGGGYYYAPPYHYGPAPPPPNPIVPYFPYYYHSPPPRNTGSTLF 164
            G  GGGG +Y PPY   PAPPPPNPIVPYFP++YH+PPP +  ++++
Sbjct: 121 NGGGGGGGAFYPPPYQNYPAPPPPNPIVPYFPFWYHTPPPTSAANSVY 160

[Close]

BLAST of Spo13198.1 vs. UniProtKB/TrEMBL
Match: A0A067G0B7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029574mg PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.900e-26
Identity = 86/155 (55.48%), Postives = 101/155 (65.16%), Query Frame = 1


		  
Query: 14  LLLLLLNILPLTTANFRVVANYEVACTMCNTCQ-PCNPYPSSTPPPPSPPPPSPPPPATT 73
           +  LL   L L          Y++ CTMC++C  PC P PS  PP PSPPPPSPPP A++
Sbjct: 14  IFFLLQEHLALGANVTTTTTKYQIECTMCSSCDNPCQPDPSPPPPSPSPPPPSPPP-ASS 73

Query: 74  TAGCPPPPSQPSSGGGGTSGSYYYSSPPPPSQPSYVY---PPPSGGGGSSGG--GGYYYA 133
           +  CPPPPS PSS GGG+ GSYYY SPPPPS PS  Y   PPPS G G+  G  GG Y+ 
Sbjct: 74  SPNCPPPPSPPSSSGGGSGGSYYY-SPPPPSSPSSSYSSPPPPSNGNGNGNGGIGGLYFP 133

Query: 134 PPYHYG-PAPPPPNPIVPYFPYYYHSPPPRNTGST 162
           PP     P PPPPNPIVPYFP+YY+SPPP +  S+
Sbjct: 134 PPNRGNYPTPPPPNPIVPYFPFYYYSPPPPSKSSS 166

[Close]

BLAST of Spo13198.1 vs. TAIR (Arabidopsis)
Match: AT5G49280.1 (hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 115.9 bits (289), Expect = 2.600e-26
Identity = 92/178 (51.69%), Postives = 111/178 (62.36%), Query Frame = 1


		  
Query: 9   SLLPILLLLLLNILPLTTANFRVVANYEVACTMCNTCQ-PCNPYPSSTPPPPSPPPPSPP 68
           +L  ++++LL+++ P  T+   VV+     CTMC++C  PC+P  S      SPPPPSPP
Sbjct: 8   TLSTLVVMLLVSVTPTVTSKDEVVS-----CTMCSSCDNPCSPVQS------SPPPPSPP 67

Query: 69  PPATTTAGCPPPPSQPSSGGGGTSGSYYYSSPPPPSQP--SYVYPPPSGGGGSSGGGGYY 128
           PP+T T  CPPPPS PSSGGG    SYYY   PPPSQ      YPPP GGGG     GYY
Sbjct: 68  PPSTPTTACPPPPSPPSSGGG---SSYYY---PPPSQSGGGSKYPPPYGGGGQ----GYY 127

Query: 129 YAPPYHYG-PAPPPPNPIVPYFPYYYHSPPPRNTGSTLFRNSIFCSFLLPLFFSFFFL 183
           Y PPY    P PPPPNPIVPYFP+YYH+PPP  +GS  F +S   S +  LF  F  L
Sbjct: 128 YPPPYSGNYPTPPPPNPIVPYFPFYYHTPPP-GSGSDRFMSSY--SIIFALFAVFLCL 161

[Close]

BLAST of Spo13198.1 vs. TAIR (Arabidopsis)
Match: AT3G06750.1 (hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 100.9 bits (250), Expect = 8.500e-22
Identity = 82/167 (49.10%), Postives = 95/167 (56.89%), Query Frame = 1


		  
Query: 15  LLLLLNILPLTTANFRVVANYEVACTMCNTC-QPCNPYPSSTPPPPSPPPPSPPPPATTT 74
           LL+LL  LPL   +     +  V+CTMC++C  PCNP PSS  PP               
Sbjct: 12  LLILLMSLPLLVTS----KDETVSCTMCSSCDNPCNPVPSSYSPP--------------- 71

Query: 75  AGCPPPPSQPSSGGGGTSGSYYYSSPPPPSQPSYVYPPPSGGGGSSGGGGYYYAPPYH-- 134
              PPPPS  SSGGG   GSYYYS PPP S     YPPP GG G  G    YY PPY+  
Sbjct: 72  ---PPPPS--SSGGG---GSYYYSPPPPSSSGGVKYPPPYGGDGYGG----YYPPPYYGN 131

Query: 135 YGPAPPPPNPIVPYFPYYYHSPPPRNTGSTLFRNS-IFCSFLLPLFF 178
           YG  PPPPNPIVPYFP+YYH+PP   +GS   +NS +F  F + L F
Sbjct: 132 YG-TPPPPNPIVPYFPFYYHTPPQGYSGSARLQNSLLFALFAVLLCF 146

[Close]

BLAST of Spo13198.1 vs. TAIR (Arabidopsis)
Match: AT4G16140.1 (proline-rich family protein)

HSP 1 Score: 90.1 bits (222), Expect = 1.500e-18
Identity = 79/149 (53.02%), Postives = 88/149 (59.06%), Query Frame = 1


		  
Query: 39  CTMCNTCQ-PCNPYPSSTPPPPSPPPPSPPPPATTTAGCPPPPSQPSSGGGGTSGSYYYS 98
           CTMC +C  PC P PS   PPP P  PSPPPP+ TT  CPPPPS  SSGG    G YYY 
Sbjct: 31  CTMCTSCDNPCQPNPS---PPPPPSNPSPPPPSPTTTACPPPPS--SSGG----GPYYYY 90

Query: 99  SPPPPSQPSYVYPPPSGGGGSSGGGGYYYAPPYHYG--PAPPPPNPIVPYFPYYYHSPPP 158
             PP SQ     PPP     SS  GGYYY PP   G  P  PPPNPIVPYFP+YY++PPP
Sbjct: 91  --PPASQSGSYRPPP-----SSSSGGYYYPPPKSGGNYPYTPPPNPIVPYFPFYYYNPPP 150

Query: 159 RNTGS---TLFRNSIFCSFLLPLFFSFFF 182
           ++  S      R S   SF+  L FS +F
Sbjct: 151 QSVMSGSDAKIRFSYGVSFI--LIFSLYF 161

[Close]

BLAST of Spo13198.1 vs. TAIR (Arabidopsis)
Match: AT3G22800.1 (Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 51.2 bits (121), Expect = 7.700e-7
Identity = 54/131 (41.22%), Postives = 60/131 (45.80%), Query Frame = 1


		  
Query: 27  ANFRVVANYEVACTMCNTCQPCNPYPSSTPPPPSPPPPSPPPPATTTAGCPPPPSQPSSG 86
           A  +  ++Y + C     C P +P P   PPPP PPPP PPPP       PPPP  P   
Sbjct: 357 AECKSFSSYPIDCASFG-CSPPSPPPPPPPPPPPPPPPPPPPPPP-----PPPPPPP--- 416

Query: 87  GGGTSGSYYYSS--PPPPSQPSYVYPPPSGGGGSSGGGGYYYAPPYHYGPAPPPPNPIVP 146
                  Y Y S  PPPPS P YVYPPP               PPY Y   PPPP+P   
Sbjct: 417 -------YVYPSPPPPPPSPPPYVYPPP--------------PPPYVY---PPPPSP--- 449

Query: 147 YFPYYYHSPPP 156
             PY Y  PPP
Sbjct: 477 --PYVYPPPPP 449

The following BLAST results are available for this feature:

BLAST of Spo13198.1 vs. NCBI nr
BLAST of Spo13198.1 vs. UniProtKB/TrEMBL
BLAST of Spo13198.1 vs. ExPASy Swiss-Prot
BLAST of Spo13198.1 vs. TAIR (Arabidopsis)

BLAST of Spo13198.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902229762\|gb\|KNA21593.1\|	3.0e-93	100.	hypothetical protein SOVF_0417...	[more]
gi\|731321157\|ref\|XP_010671197.1\|	1.1e-63	78.4	PREDICTED: leucine-rich repeat...	[more]
gi\|567852555\|ref\|XP_006419441.1\|	1.2e-28	59.3	hypothetical protein CICLE_v10...	[more]
gi\|729458428\|ref\|XP_010524723.1\|	2.2e-27	56.1	PREDICTED: formin-B-like [Tare...	[more]
gi\|359477137\|ref\|XP_002271531.2\|	4.8e-27	47.8	PREDICTED: leucine-rich repeat...	[more]

BLAST of Spo13198.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RQ38_SPIOL	2.1e-93	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CWQ7_BETVU	7.7e-64	78.4	Uncharacterized protein OS=Bet...	[more]
V4S724_9ROSI	8.0e-29	59.3	Uncharacterized protein OS=Cit...	[more]
F6H6U0_VITVI	3.4e-27	50.6	Putative uncharacterized prote...	[more]
A0A067G0B7_CITSI	2.9e-26	55.4	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo13198.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo13198.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4


Match Name	E-value	Identity	Description
AT5G49280.1	2.6e-26	51.6	hydroxyproline-rich glycoprote...	[more]
AT3G06750.1	8.5e-22	49.1	hydroxyproline-rich glycoprote...	[more]
AT4G16140.1	1.5e-18	53.0	proline-rich family protein	[more]
AT3G22800.1	7.7e-7	41.2	Leucine-rich repeat (LRR) fami...	[more]

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo20047	0.70	Barchart \| Table
Spo26712	0.67	Barchart \| Table
Spo00380	0.66	Barchart \| Table