Spo13085 (gene)

Overview
NameSpo13085
Typegene
OrganismSpinacia oleracea (Spinach)
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
LocationSpoScf_04107 : 855 .. 4839 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTGATACAGCTTCAGTGTTGTTAGAAGCAATTGGCTATATCAGATTCCTTCAGGGTCAAATTCAGGTAATTTTTTCATTTTATTTTATTTTGTTTTTTATTTTATTTTTATTTAAAAAAAGAAAAATGTTTTGTTTTGTTGACATATAATTGTGCCTTTGAGGAACTAAAATATCACTCAAGCATGCAGTTACTAGCAGTACTTTAAAAGACCCACATTTGTGCTCAACTGCCCAAATTCTTGCATTTTAAAAACATTATTTTTCTTTTTCCAAAATATGAAAAAAAAAGAAAAAAAAATCATACTTTGTAGTATATTGATGAAATGATTTCCCTCAAAAAAAAAAAAATATTGATGAAATGATGACTAATTAACATTGTATTTTATGATTTTGATTAATATAGGCTCTTAGTTCTCCTTACTTGGGAAATAATAACGCCTCTTCGAAGAATAACCAACATTCTGTAAGTACTACTCCCTCCATTTCTTTTTGATGTATCCATTTGGAATCTGGTGTGGTTTTAAGAAAATTGTAATATTGGTTTGTATGGGTATAAGTGTAATGATTGAGTGTAAGAGAAATGATTGGTGTAAGAGATTACAATAAATAAAGGAGCGAGAAAATAATAAAGAAATAAGGTAAGAAAGAGGAGTGATAATGATGGGTGATAAAGGAGGTGAGAGAGTGTGTATATGGGGAAGGGAAAAGAATTAAATATTATGGGTGGGGAAAATAGGTGGGAATATGGGTAGAATCTTTAGGTATTTTGGTAATTAGATAGAAATGTAAGGGTATTTTAGGATAAAATGTATGTCCAAAAATAGAATAGATTCTAAATGGATACAACAATATGAAACGCTTAAAATAGAAACGGATACAACAAAAAGAAACGGAGGGAGTAATTAATAACTTTTTCAAAAAAATCGTAATTCTTTTATATTACGTATAAAATATGGAGTAACCTATATATTTCCCTCGATATTTTAATTACAGATTCATGGAGAAAGGAATTGTCTATTTCCTGACCATCCTGGACAGGTATGCATTATTAACCACGTGTATACATTTTCTTTTTTATCATGATAGAACAGAGTATAAACTGGTAAAGTTATATTATTGTGAGTCTGCTTCATACAAGTTAGTTGTCTGATGTTCCGTGCATATAATAAACTGTTTTAAAAGCCGTAGATCATATTCGTGTTGGAGAGGCATCTTTAAGGAACTATTCTACTTACAAAAAGGCATATAAATGTACATATAAAGAACAATGTCCTCAGCTTTTAGGGTTGCCTTTTGAGTTTTGAAATACAAAAAATGTGATTAAATTAGAGACATGCATCTTTGGCCTAATTAAGTTAAAACTTGTTATTTAAANTTTAGGGGTTGCCTTTTGAGTTTTGAAATACAAAAAATGTGATTAAATTAGAGACATGCATCTTTGGCCTAATTAAGTTAAAACTTGTTATTTAAATTTTTTAATGATAATTTAAACTTATTAATATTATTATTCTCCACCCTTTAATTTTGTAGCTTTTGAATGATTCCTGCCTGAAAAGAAGAGGAGCTGCATACCAAGAGGTACAACTAATTACATACATTCATACACATACATATAGTTTATTAATTACTCCCTCCGTCCCTTAATACTCGCACCGTTTTGACTGGACACGTTTGCCAATGCACAACTTTGACCACCAATATCTTTAACTACATATTATAAAAACTTATAAATATATTAATATTTTGAAAATATATATTAAGATGAAGATAACAATATATTATATACTAATATTTGTTTTCATATACTAGAAATAAAATAAGGTCAAAGTGAATTATAAATAGTACAAAAAGTCAAAACGGTGCGAGTATTAAGGGACAGAGGGAGTACTTTCTTGTTTGCTTAATTATAAATAATGATGATTCATTCATTAACAAACACATAATCATTAACCCACTTGAGCACTCAATAATTAAGTTTGGTTCTTAAACACCATCATTTCATGTTTGATTATGTATAGTAGTATATACTTGACTTTACATACCAACATTTTAGTAGTCTTTCTACATACTAATCATTATAAGACCTTATTGTTCTTAATCCCAAATAGTCCACATGAAAGTCATGCTAAAAAGTGTAACAAGCTAGCTAGCTAGGTCATTGGATTCTTCTACCGTACAGTTACGTAAATAAAAAGTCTCATTTACATAATTACAATGTAACTATTTAACTTGTTACAAACTTAATTACAATGTTATACTACTATTGTGTAACGTTTTACTTCCATTTGATAGCTAGTTAAGATTATAAACTATTTCAAAGATTGTACGTAATATGTAGAGCGGCATACACCAAGGTCGTCTCTGGGAATTCAGAGGCTCTGTACTTATTTTATTTTACTCTTAATGAAATGATTAGTAACACTAATTTTTTTTTAAAAAAAATGTACATATTGGGAGTTGATCTTGCAACCTATGAAATATTAAGAGAATGTTGTACCATTGATCCACAAATCAATTACGGCCCTGTTTGGTTAGGAGTTGTTAGTTGTTGGCCGATAACTGATTTGACTAGCTGTTAGCGGTTAGCTGTTTGCATTAGCTGATTTGACTAGCTGGTTGCATTAACTGATTTGACTAGCTGTTTGCATTAGTTGTTTGTGTAAAAGTGTTTAGTAAATTAGCTGATAGTTGTTAGCTGTTTAATATGAAAACTGACCATTAAGGACATTGACATACTTTGTGTCTTATTAATATTAAACAAATATTTTATTGTGTTAATTTTTTTCTCTCTATATTTTTATAATAAACATTGACTAAATAAAATAATTTTTTTTTAAAAAAAAAAATTCTTTATTTAATAATATATATTTTTCAAATAGATAAATATTACTAATGAAATTTTAAGCATGATTGCAATATACTTCAATTGCTTCAAAGTACCAATATAAAATTTATTACAACAAAAAACGAATCTATTAAATATGGTGAAATCAAAATGAAAGTGTGAGTAATGTTTTTAGGAGAAAAATATGTAGGGTACCAAGGTTGATAGTGGTTGTAATAATAGGCAATAGTAGGACAAAATAGTCGTTTTCATCCACTTTCTGAAACCTCTAATTGCAAAAAGCTCCTATATTGAGCTTTTTTAAAATTAGCTTTTTCACCCCAAAACTCTCTTCCAATCCTCTCCTAACCAAACACTCCCAGTTAGCTTTATCTAAAGGTCAAACCTCTAATTCAATTCACCCCAAAAAGCTCTTTTTCCCTCAAACCTCTCCTAACCAAACACCCCCTAAGTATCTTCTATTTGCACGATTTACTATAAAACCAATAATTGGATTATGTAAGTTACCACTAATTTTTTTGGGGCCCCAAAAATTTAGGGCCCTGTGCTGGAGGTCCTATTAGACCTCGTGATAGACGGCCTTGTCATACACATATATATAAACCATTCTGTTAATACTTTTTTTTACTACTACTCCGTACTGTGTAAATAGGAAGTGTCATTTATATACTCCGTAATTATATACATACAACATGCATGGAGTAATTAATTAACTCGTTACAAACTTGGGCAATATAAATTACAAATTGGGGTGGGGGGATTCGAACCTGAAACCTACTGTACACAGACCCTCAGTCTTAACCACTAGACCAAGACATCATTGGTGTTACAAACTTACAGTTTAATTTACATAATTATATACATATAATATGTTAACTAGTTAATTGGTTACATACTTGCAATGTTATACTACATTACTACGTAACTTTTTATTTGGTACTTGATAAGATTACAAAAATTGTTTCATGTGCTTAATGAGGGGTTTTGAATAAAATGTTATTAGGACAACAAAGACGCAGCATCAAAGGATTTGTTGAAAAGTAGAGGGTTATGTTTGGTTCCAATATCTTGCACCCAGCTTATTGGGAGTGACAATGGAGCTGATTATTGGGCACAATCACTTGGTGGAGGATTTTAA

mRNA sequence

ACTGATACAGCTTCAGTGTTGTTAGAAGCAATTGGCTATATCAGATTCCTTCAGGGTCAAATTCAGGCTCTTAGTTCTCCTTACTTGGGAAATAATAACGCCTCTTCGAAGAATAACCAACATTCTATTCATGGAGAAAGGAATTGTCTATTTCCTGACCATCCTGGACAGCTTTTGAATGATTCCTGCCTGAAAAGAAGAGGAGCTGCATACCAAGAGGACAACAAAGACGCAGCATCAAAGGATTTGTTGAAAAGTAGAGGGTTATGTTTGGTTCCAATATCTTGCACCCAGCTTATTGGGAGTGACAATGGAGCTGATTATTGGGCACAATCACTTGGTGGAGGATTTTAA

Coding sequence (CDS)

ACTGATACAGCTTCAGTGTTGTTAGAAGCAATTGGCTATATCAGATTCCTTCAGGGTCAAATTCAGGCTCTTAGTTCTCCTTACTTGGGAAATAATAACGCCTCTTCGAAGAATAACCAACATTCTATTCATGGAGAAAGGAATTGTCTATTTCCTGACCATCCTGGACAGCTTTTGAATGATTCCTGCCTGAAAAGAAGAGGAGCTGCATACCAAGAGGACAACAAAGACGCAGCATCAAAGGATTTGTTGAAAAGTAGAGGGTTATGTTTGGTTCCAATATCTTGCACCCAGCTTATTGGGAGTGACAATGGAGCTGATTATTGGGCACAATCACTTGGTGGAGGATTTTAA

Protein sequence

TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLNDSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLGGGF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo13085.1Spo13085.1mRNA


Homology
[Close]
BLAST of Spo13085.1 vs. NCBI nr
Match: gi|902231915|gb|KNA22447.1| (hypothetical protein SOVF_033280 isoform A [Spinacia oleracea])

HSP 1 Score: 242.7 bits (618), Expect = 3.300e-61
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1 

		  

Query: 1   TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLN 60
           TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLN
Sbjct: 310 TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLN 369

Query: 61  DSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLGGGF 118
           DSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLGGGF
Sbjct: 370 DSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLGGGF 426
[Close]
BLAST of Spo13085.1 vs. NCBI nr
Match: gi|902231916|gb|KNA22448.1| (hypothetical protein SOVF_033280 isoform B [Spinacia oleracea])

HSP 1 Score: 242.7 bits (618), Expect = 3.300e-61
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1 

		  

Query: 1   TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLN 60
           TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLN
Sbjct: 311 TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLN 370

Query: 61  DSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLGGGF 118
           DSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLGGGF
Sbjct: 371 DSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLGGGF 427
[Close]
BLAST of Spo13085.1 vs. NCBI nr
Match: gi|731359612|ref|XP_010691374.1| (PREDICTED: transcription factor bHLH68-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 201.4 bits (511), Expect = 8.400e-49
Identity = 101/116 (87.07%), Postives = 105/116 (90.52%), Query Frame = 1 

		  

Query: 1   TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSK-NNQHSIHGERNCLFPDHPGQLL 60
           TDTASVLLEAIGYIRFLQGQI+ALSSPYLGNNN S+K NNQH +HGERNCLFPD PGQLL
Sbjct: 280 TDTASVLLEAIGYIRFLQGQIEALSSPYLGNNNTSAKNNNQHFVHGERNCLFPDDPGQLL 339

Query: 61  NDSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLGG 116
           NDSCLKRRGAA  EDN   A KD LKSRGLCLVPISCTQL+GSDNGADYWAQSLGG
Sbjct: 340 NDSCLKRRGAANLEDNIKGALKD-LKSRGLCLVPISCTQLVGSDNGADYWAQSLGG 394
[Close]
BLAST of Spo13085.1 vs. NCBI nr
Match: gi|870848566|gb|KMT00855.1| (hypothetical protein BVRB_9g221290 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 201.4 bits (511), Expect = 8.400e-49
Identity = 101/116 (87.07%), Postives = 105/116 (90.52%), Query Frame = 1 

		  

Query: 1   TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSK-NNQHSIHGERNCLFPDHPGQLL 60
           TDTASVLLEAIGYIRFLQGQI+ALSSPYLGNNN S+K NNQH +HGERNCLFPD PGQLL
Sbjct: 269 TDTASVLLEAIGYIRFLQGQIEALSSPYLGNNNTSAKNNNQHFVHGERNCLFPDDPGQLL 328

Query: 61  NDSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLGG 116
           NDSCLKRRGAA  EDN   A KD LKSRGLCLVPISCTQL+GSDNGADYWAQSLGG
Sbjct: 329 NDSCLKRRGAANLEDNIKGALKD-LKSRGLCLVPISCTQLVGSDNGADYWAQSLGG 383
[Close]
BLAST of Spo13085.1 vs. NCBI nr
Match: gi|643729382|gb|KDP37262.1| (hypothetical protein JCGZ_06318 [Jatropha curcas])

HSP 1 Score: 173.7 bits (439), Expect = 1.900e-40
Identity = 85/117 (72.65%), Postives = 97/117 (82.91%), Query Frame = 1 

		  

Query: 1   TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLN 60
           TDTASVLLEAIGYIRFLQGQI+ALSSPYL    +S+  NQHS+ GERNC+FP+ PGQLLN
Sbjct: 228 TDTASVLLEAIGYIRFLQGQIEALSSPYL-TTASSNIRNQHSVQGERNCVFPEDPGQLLN 287

Query: 61  DSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLGGGF 118
           D CLKR+G   Q+DN     KD LKSRGLCLVP+SCTQ +GSDNGADYWA ++GGGF
Sbjct: 288 DICLKRKGGPNQQDNSQDKPKD-LKSRGLCLVPVSCTQHVGSDNGADYWAPAIGGGF 342
[Close]
BLAST of Spo13085.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RSK9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_033280 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.300e-61
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1 

		  

Query: 1   TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLN 60
           TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLN
Sbjct: 311 TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLN 370

Query: 61  DSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLGGGF 118
           DSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLGGGF
Sbjct: 371 DSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLGGGF 427
[Close]
BLAST of Spo13085.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RUD3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_033280 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.300e-61
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1 

		  

Query: 1   TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLN 60
           TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLN
Sbjct: 310 TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLN 369

Query: 61  DSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLGGGF 118
           DSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLGGGF
Sbjct: 370 DSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLGGGF 426
[Close]
BLAST of Spo13085.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BHG9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g221290 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 5.900e-49
Identity = 101/116 (87.07%), Postives = 105/116 (90.52%), Query Frame = 1 

		  

Query: 1   TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSK-NNQHSIHGERNCLFPDHPGQLL 60
           TDTASVLLEAIGYIRFLQGQI+ALSSPYLGNNN S+K NNQH +HGERNCLFPD PGQLL
Sbjct: 269 TDTASVLLEAIGYIRFLQGQIEALSSPYLGNNNTSAKNNNQHFVHGERNCLFPDDPGQLL 328

Query: 61  NDSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLGG 116
           NDSCLKRRGAA  EDN   A KD LKSRGLCLVPISCTQL+GSDNGADYWAQSLGG
Sbjct: 329 NDSCLKRRGAANLEDNIKGALKD-LKSRGLCLVPISCTQLVGSDNGADYWAQSLGG 383
[Close]
BLAST of Spo13085.1 vs. UniProtKB/TrEMBL
Match: A0A067KME3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06318 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.300e-40
Identity = 85/117 (72.65%), Postives = 97/117 (82.91%), Query Frame = 1 

		  

Query: 1   TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLN 60
           TDTASVLLEAIGYIRFLQGQI+ALSSPYL    +S+  NQHS+ GERNC+FP+ PGQLLN
Sbjct: 228 TDTASVLLEAIGYIRFLQGQIEALSSPYL-TTASSNIRNQHSVQGERNCVFPEDPGQLLN 287

Query: 61  DSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLGGGF 118
           D CLKR+G   Q+DN     KD LKSRGLCLVP+SCTQ +GSDNGADYWA ++GGGF
Sbjct: 288 DICLKRKGGPNQQDNSQDKPKD-LKSRGLCLVPVSCTQHVGSDNGADYWAPAIGGGF 342
[Close]
BLAST of Spo13085.1 vs. UniProtKB/TrEMBL
Match: B9RKM4_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_1051610 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.400e-39
Identity = 79/117 (67.52%), Postives = 98/117 (83.76%), Query Frame = 1 

		  

Query: 1   TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLN 60
           TDTASVLLEAIGYIRFLQ QI+ALS PYLG+ +++ +  Q S+ GERNC+FP+ PGQLLN
Sbjct: 247 TDTASVLLEAIGYIRFLQNQIEALSLPYLGSGSSNMRQQQQSVQGERNCIFPEDPGQLLN 306

Query: 61  DSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLGGGF 118
           D+C+KR+GA+ Q+D  +   KD L+SRGLCLVP+SCT  +GSDNGADYWA +LGGGF
Sbjct: 307 DNCIKRKGASDQQDCNEEPKKD-LRSRGLCLVPVSCTLQVGSDNGADYWAPALGGGF 362
[Close]
BLAST of Spo13085.1 vs. ExPASy Swiss-Prot
Match: BH068_ARATH (Transcription factor bHLH68 OS=Arabidopsis thaliana GN=BHLH68 PE=2 SV=2)

HSP 1 Score: 147.5 bits (371), Expect = 9.000e-35
Identity = 72/117 (61.54%), Postives = 90/117 (76.92%), Query Frame = 1 

		  

Query: 1   TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLN 60
           TDTASVL EAIGYIRFLQ QI+ALS PY G   + +  +Q  + G+R+C+FP+ PGQL+N
Sbjct: 286 TDTASVLSEAIGYIRFLQSQIEALSHPYFGTTASGNMRHQQHLQGDRSCIFPEDPGQLVN 345

Query: 61  DSCLKRRGAAYQE-DNKDAAS--KDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLG 115
           D C+KRRGA+    DN++A+   K  L+SRGLCLVPISCT  +GSDNGADYWA +LG
Sbjct: 346 DQCMKRRGASSSSTDNQNASEEPKKDLRSRGLCLVPISCTLQVGSDNGADYWAPALG 402
[Close]
BLAST of Spo13085.1 vs. ExPASy Swiss-Prot
Match: BH133_ARATH (Transcription factor bHLH133 OS=Arabidopsis thaliana GN=BHLH133 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 8.200e-28
Identity = 68/121 (56.20%), Postives = 82/121 (67.77%), Query Frame = 1 

		  

Query: 1   TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNC--LFPDHPGQL 60
           TDTASVL EAIGYIRFL  QI+ALS PY G     S+NN    H +RN   +FP+ PGQL
Sbjct: 242 TDTASVLSEAIGYIRFLHSQIEALSLPYFG---TPSRNNMMHQHAQRNMNGIFPEDPGQL 301

Query: 61  LNDSCLKRRGAAYQEDNK-----DAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSL 115
           +N+ C+KR  +    DN+     +   KD L+SRGLCLVPISCT  +GSDNGADYWA + 
Sbjct: 302 VNEYCMKRGVSLSSTDNQKSNPNEEPMKD-LRSRGLCLVPISCTLQVGSDNGADYWAPAF 358
[Close]
BLAST of Spo13085.1 vs. ExPASy Swiss-Prot
Match: BH113_ARATH (Transcription factor bHLH113 OS=Arabidopsis thaliana GN=BHLH113 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.300e-11
Identity = 47/115 (40.87%), Postives = 60/115 (52.17%), Query Frame = 1 

		  

Query: 1   TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLN 60
           TD ASVL EA+GYI+FLQ QIQ L SPYL N         HS+ G          G +  
Sbjct: 177 TDAASVLHEAMGYIKFLQDQIQVLCSPYLIN---------HSLDG----------GVVTG 236

Query: 61  DSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLGG 116
           D     +            +KDL +SRGLCLVP+S T  + + NGAD+W+ +  G
Sbjct: 237 DVMAAMK------------AKDL-RSRGLCLVPVSSTVHVENSNGADFWSPATMG 259
[Close]
BLAST of Spo13085.1 vs. ExPASy Swiss-Prot
Match: BH110_ARATH (Transcription factor bHLH110 OS=Arabidopsis thaliana GN=BHLH110 PE=2 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 2.000e-10
Identity = 42/105 (40.00%), Postives = 58/105 (55.24%), Query Frame = 1 

		  

Query: 1   TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLN 60
           TDTASVL+EAIGYI+FLQ QI+ LS PY+     +S+N             P    QL++
Sbjct: 355 TDTASVLMEAIGYIKFLQSQIETLSVPYM----RASRNR------------PGKASQLVS 414

Query: 61  DSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNG 106
            S          ++  +  ++D L+SRGLCLVP+SC   +  D G
Sbjct: 415 QS----------QEGDEEETRD-LRSRGLCLVPLSCMTYVTGDGG 432
[Close]
BLAST of Spo13085.1 vs. ExPASy Swiss-Prot
Match: BH123_ARATH (Transcription factor bHLH123 OS=Arabidopsis thaliana GN=BHLH123 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.300e-9
Identity = 42/117 (35.90%), Postives = 58/117 (49.57%), Query Frame = 1 

		  

Query: 1   TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLN 60
           TD ASVL EAI YI+FL  Q+ ALS+PY+   + +S  +Q S          DH  +L  
Sbjct: 367 TDAASVLSEAIEYIKFLHQQVSALSNPYM--KSGASLQHQQS----------DHSTEL-- 426

Query: 61  DSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLGGGF 118
                           + + +  L+SRGLCLVP+S T  +  D   D+W  + GG F
Sbjct: 427 ----------------EVSEEPDLRSRGLCLVPVSSTFPVTHDTTVDFWTPTFGGTF 453
[Close]
BLAST of Spo13085.1 vs. TAIR (Arabidopsis)
Match: AT4G29100.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 147.5 bits (371), Expect = 5.100e-36
Identity = 72/117 (61.54%), Postives = 90/117 (76.92%), Query Frame = 1 

		  

Query: 1   TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLN 60
           TDTASVL EAIGYIRFLQ QI+ALS PY G   + +  +Q  + G+R+C+FP+ PGQL+N
Sbjct: 286 TDTASVLSEAIGYIRFLQSQIEALSHPYFGTTASGNMRHQQHLQGDRSCIFPEDPGQLVN 345

Query: 61  DSCLKRRGAAYQE-DNKDAAS--KDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLG 115
           D C+KRRGA+    DN++A+   K  L+SRGLCLVPISCT  +GSDNGADYWA +LG
Sbjct: 346 DQCMKRRGASSSSTDNQNASEEPKKDLRSRGLCLVPISCTLQVGSDNGADYWAPALG 402
[Close]
BLAST of Spo13085.1 vs. TAIR (Arabidopsis)
Match: AT2G20100.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 124.4 bits (311), Expect = 4.600e-29
Identity = 68/121 (56.20%), Postives = 82/121 (67.77%), Query Frame = 1 

		  

Query: 1   TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNC--LFPDHPGQL 60
           TDTASVL EAIGYIRFL  QI+ALS PY G     S+NN    H +RN   +FP+ PGQL
Sbjct: 242 TDTASVLSEAIGYIRFLHSQIEALSLPYFG---TPSRNNMMHQHAQRNMNGIFPEDPGQL 301

Query: 61  LNDSCLKRRGAAYQEDNK-----DAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSL 115
           +N+ C+KR  +    DN+     +   KD L+SRGLCLVPISCT  +GSDNGADYWA + 
Sbjct: 302 VNEYCMKRGVSLSSTDNQKSNPNEEPMKD-LRSRGLCLVPISCTLQVGSDNGADYWAPAF 358
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BLAST of Spo13085.1 vs. TAIR (Arabidopsis)
Match: AT3G19500.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 68.6 bits (166), Expect = 3.000e-12
Identity = 47/115 (40.87%), Postives = 60/115 (52.17%), Query Frame = 1 

		  

Query: 1   TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLN 60
           TD ASVL EA+GYI+FLQ QIQ L SPYL N         HS+ G          G +  
Sbjct: 177 TDAASVLHEAMGYIKFLQDQIQVLCSPYLIN---------HSLDG----------GVVTG 236

Query: 61  DSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLGG 116
           D     +            +KDL +SRGLCLVP+S T  + + NGAD+W+ +  G
Sbjct: 237 DVMAAMK------------AKDL-RSRGLCLVPVSSTVHVENSNGADFWSPATMG 259
[Close]
BLAST of Spo13085.1 vs. TAIR (Arabidopsis)
Match: AT1G27660.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.100e-11
Identity = 42/105 (40.00%), Postives = 58/105 (55.24%), Query Frame = 1 

		  

Query: 1   TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLN 60
           TDTASVL+EAIGYI+FLQ QI+ LS PY+     +S+N             P    QL++
Sbjct: 355 TDTASVLMEAIGYIKFLQSQIETLSVPYM----RASRNR------------PGKASQLVS 414

Query: 61  DSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNG 106
            S          ++  +  ++D L+SRGLCLVP+SC   +  D G
Sbjct: 415 QS----------QEGDEEETRD-LRSRGLCLVPLSCMTYVTGDGG 432
[Close]
BLAST of Spo13085.1 vs. TAIR (Arabidopsis)
Match: AT3G20640.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 63.9 bits (154), Expect = 7.400e-11
Identity = 42/117 (35.90%), Postives = 58/117 (49.57%), Query Frame = 1 

		  

Query: 1   TDTASVLLEAIGYIRFLQGQIQALSSPYLGNNNASSKNNQHSIHGERNCLFPDHPGQLLN 60
           TD ASVL EAI YI+FL  Q+ ALS+PY+   + +S  +Q S          DH  +L  
Sbjct: 367 TDAASVLSEAIEYIKFLHQQVSALSNPYM--KSGASLQHQQS----------DHSTEL-- 426

Query: 61  DSCLKRRGAAYQEDNKDAASKDLLKSRGLCLVPISCTQLIGSDNGADYWAQSLGGGF 118
                           + + +  L+SRGLCLVP+S T  +  D   D+W  + GG F
Sbjct: 427 ----------------EVSEEPDLRSRGLCLVPVSSTFPVTHDTTVDFWTPTFGGTF 453
The following BLAST results are available for this feature:
BLAST of Spo13085.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902231915|gb|KNA22447.1|3.3e-61100.hypothetical protein SOVF_0332... [more]
gi|902231916|gb|KNA22448.1|3.3e-61100.hypothetical protein SOVF_0332... [more]
gi|731359612|ref|XP_010691374.1|8.4e-4987.0PREDICTED: transcription facto... [more]
gi|870848566|gb|KMT00855.1|8.4e-4987.0hypothetical protein BVRB_9g22... [more]
gi|643729382|gb|KDP37262.1|1.9e-4072.6hypothetical protein JCGZ_0631... [more]
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BLAST of Spo13085.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RSK9_SPIOL2.3e-61100.Uncharacterized protein OS=Spi... [more]
A0A0K9RUD3_SPIOL2.3e-61100.Uncharacterized protein OS=Spi... [more]
A0A0J8BHG9_BETVU5.9e-4987.0Uncharacterized protein OS=Bet... [more]
A0A067KME3_JATCU1.3e-4072.6Uncharacterized protein OS=Jat... [more]
B9RKM4_RICCO1.4e-3967.5Transcription factor, putative... [more]
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BLAST of Spo13085.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
BH068_ARATH9.0e-3561.5Transcription factor bHLH68 OS... [more]
BH133_ARATH8.2e-2856.2Transcription factor bHLH133 O... [more]
BH113_ARATH5.3e-1140.8Transcription factor bHLH113 O... [more]
BH110_ARATH2.0e-1040.0Transcription factor bHLH110 O... [more]
BH123_ARATH1.3e-935.9Transcription factor bHLH123 O... [more]
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BLAST of Spo13085.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G29100.15.1e-3661.5basic helix-loop-helix (bHLH) ... [more]
AT2G20100.14.6e-2956.2basic helix-loop-helix (bHLH) ... [more]
AT3G19500.13.0e-1240.8basic helix-loop-helix (bHLH) ... [more]
AT1G27660.11.1e-1140.0basic helix-loop-helix (bHLH) ... [more]
AT3G20640.17.4e-1135.9basic helix-loop-helix (bHLH) ... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3D4.10.280.10coord: 2..25
score: 8.
NoneNo IPR availablePANTHERPTHR16223FAMILY NOT NAMEDcoord: 1..117
score: 8.8
NoneNo IPR availablePANTHERPTHR16223:SF50SUBFAMILY NOT NAMEDcoord: 1..117
score: 8.8

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009058 biosynthetic process
biological_process GO:0044249 cellular biosynthetic process
biological_process GO:0009987 cellular process
biological_process GO:1901576 organic substance biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0044238 primary metabolic process
cellular_component GO:0044464 cell part
cellular_component GO:0016020 membrane
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0016491 oxidoreductase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo231500.83Barchart | Table
Spo079110.67Barchart | Table