Spo12892 (gene) | SpinachBase

Overview


Name	Spo12892
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Pentatricopeptide repeat superfamily protein, putative
Location	chr3 : 2374356 .. 2376425 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAATTTATCAAAATCTCTGCAAATTTCGTCAACTCTATTGCGTTCTTTAATTACCCACAAACCCTTTCCTTCATCTTCAACCTCTTCATCTTGTTCAGAAACCATAATTTTCCCGGACCCAATTCCAGAGAATCGTCAAAATTTCTTTCATGATGTAAATGGTTTATTGAGCTCAAAGGATCCACCTTATGCAATGGATTTCTTCAAATGGGCTGAAAAAGAACCAGGGTTTGGCGAAAGGTTTGATTCTTTCCGTTTATTGTTGCAAGGTTTGATGGGCTTGGAGTGTCTCAAAGATACAGTGAACTATTTTTCAGACAAGAAAATCCCTGATGCTAAAACTGTGATTCAAGGCCTCAAAGATGGCTCCAACAGGTATGGTTTTAATTTAAATTCGCGGGTTTTTAATTAGTTGATGTATGGTTTTATTAAAACTGGTAGGATTGAGGATTCAATTAGTTGTGTTGAATGGATGCTTGTAAATAACATCCGTTTGTGGGTGCCATGTGTGAAGCATGTTATGTATGAGTCTTGGGAGTTTTATGATAAGGCGTATTATGATTCTGGTGCTAATTTGGAGCGATACTTTAAGTTAGCAAGGGATAAGGGAGTTGAATTAGATCCTGCTTCATTTAGTTGTGCAATTGGACTTGTTAGTCAAAAACCAGATTCAAATGCAGCTTGTAATTTGTTGTTGGAGATGAAGGAGAAGGGTTGGGTGCCCTCTGAGGGTTCCTACACCCAAGCTATTATCGCGTGTGTGAAACAGAGGAATTTGATGGAAGCTTTGAGACTGAAAGATGAAATGGTTTCTTGTGGGAAACCGATGAATTTGGTGGTTGCAACGATGTTGATGAAGGGGTATTGTGTATCGGGTGATTTGGAGAGTGCTTTAGGTTTGTTTGAAAAATTAGCTGAGCTTGAACTTTCACCAAATAAATCCACTTTTTCAGTTTTGATTGATGGATGCTGTATAAACGGAAATATGGAGAAAGCGTCTGAGCTTTATGATCAAATGACTGAAAAGGGTATTAAACCTAGTGGTTTTAATGTTAATTCATTGATTAAAGGGTTTCTGAAAGCCCGGTTGTTTGAGAAAGCTTATGAGATGTTTAACAAGGCGGCTGAATCTGGTTTGGTTGATGATTCCTCATTGAACAGTCTCCTATCATGTCTCTGTAAAGACGGCAATATGGATGAAGCTCAGAAGTTTTGGGGTATGGCGTTACAATGTGGAATTGAACCTAATCTACAAAATTATAACAACCTGATTCTTGGTTATTGTAGGAAAGGAAATGTTGCTATGGCACATGGAATGTATGTCCAGATGATAGCTAAGGGTTTGAATCCCAATGTTGTCACCTTTACAATATTAATGAACGGGCATATCAAGAAAGGTGAGGTAGGTAAAGCTCTGAAGATGTTTGATGAGATGTTGCAGAAGGGGATTAAGTGTACAGATCACGCGTACAATACTATAATTGGTGGATTGTGCAAAAATGGCCAGAGGATTGATTGTACAGATGACACGTACAATAGTATAATTGTCGGATTGTGCAAAAATGGCCAAACATCGCGTGCAAGGAAAATACTAGAGGATTTTATTAAGATAGATAAATTTGTACCATCTTGCCTGACTTATAATTCTATTGTTGGTGGATTAATTAACGAAGGTGATTTGGATTCTGCATTGTCTGTTTATAATGAGATGGGCGAGAAAGGAGTGTCCCCTGATCTTTGTACATACACAATTTTCATCGATGCATTCCTCAAGAGCAATAATTTTAATCTTGTTTTGAAAATGCAAAATGAGATGATAAGCAAGGGTCTTGAATTGGATATTACTGCATATGGCACACTTATTGATGGTTGTTGCCAAAGGGAGGACATGAAGAATGCTTGTAAACTTTTCAATCAACTGTGTGAAGCAGGGTTGTCTCCAAACTATGACATTTACTATAACATGATCATGGGTTACAGAACTTTAGGTAACATAAGAGCAGCTCTCTCGTTCGAAAAGAAAATGAATGAACAAGGGATTTTACCTGATTGGCTAGCACAGTAA

mRNA sequence

ATGAGAAATTTATCAAAATCTCTGCAAATTTCGTCAACTCTATTGCGTTCTTTAATTACCCACAAACCCTTTCCTTCATCTTCAACCTCTTCATCTTGTTCAGAAACCATAATTTTCCCGGACCCAATTCCAGAGAATCGTCAAAATTTCTTTCATGATGTAAATGGTTTATTGAGCTCAAAGGATCCACCTTATGCAATGGATTTCTTCAAATGGGCTGAAAAAGAACCAGGGTTTGGCGAAAGGTTTGATTCTTTCCGTTTATTGTTGCAAGGTTTGATGGGCTTGGAGTGTCTCAAAGATACAGTGAACTATTTTTCAGACAAGAAAATCCCTGATGCTAAAACTGTGATTCAAGGCCTCAAAGATGGCTCCAACAGGATTGAGGATTCAATTAGTTGTGTTGAATGGATGCTTGTAAATAACATCCGTTTGTGGGTGCCATGTGTGAAGCATGTTATGTATGAGTCTTGGGAGTTTTATGATAAGGCGTATTATGATTCTGGTGCTAATTTGGAGCGATACTTTAAGTTAGCAAGGGATAAGGGAGTTGAATTAGATCCTGCTTCATTTAGTTGTGCAATTGGACTTGTTAGTCAAAAACCAGATTCAAATGCAGCTTGTAATTTGTTGTTGGAGATGAAGGAGAAGGGTTGGGTGCCCTCTGAGGGTTCCTACACCCAAGCTATTATCGCGTGTGTGAAACAGAGGAATTTGATGGAAGCTTTGAGACTGAAAGATGAAATGGTTTCTTGTGGGAAACCGATGAATTTGGTGGTTGCAACGATGTTGATGAAGGGGTATTGTGTATCGGGTGATTTGGAGAGTGCTTTAGGTTTGTTTGAAAAATTAGCTGAGCTTGAACTTTCACCAAATAAATCCACTTTTTCAGTTTTGATTGATGGATGCTGTATAAACGGAAATATGGAGAAAGCGTCTGAGCTTTATGATCAAATGACTGAAAAGGGTATTAAACCTAGTGGTTTTAATGTTAATTCATTGATTAAAGGGTTTCTGAAAGCCCGGTTGTTTGAGAAAGCTTATGAGATGTTTAACAAGGCGGCTGAATCTGGTTTGGTTGATGATTCCTCATTGAACAGTCTCCTATCATGTCTCTGTAAAGACGGCAATATGGATGAAGCTCAGAAGTTTTGGGGTATGGCGTTACAATGTGGAATTGAACCTAATCTACAAAATTATAACAACCTGATTCTTGGTTATTGTAGGAAAGGAAATGTTGCTATGGCACATGGAATGTATGTCCAGATGATAGCTAAGGGTTTGAATCCCAATGTTGTCACCTTTACAATATTAATGAACGGGCATATCAAGAAAGGTGAGGTAGGTAAAGCTCTGAAGATGTTTGATGAGATGTTGCAGAAGGGGATTAAGTGTACAGATCACGCGTACAATACTATAATTGGTGGATTGTGCAAAAATGGCCAGAGGATTGATTGTACAGATGACACGTACAATAGTATAATTGTCGGATTGTGCAAAAATGGCCAAACATCGCGTGCAAGGAAAATACTAGAGGATTTTATTAAGATAGATAAATTTGTACCATCTTGCCTGACTTATAATTCTATTGTTGGTGGATTAATTAACGAAGGTGATTTGGATTCTGCATTGTCTGTTTATAATGAGATGGGCGAGAAAGGAGTGTCCCCTGATCTTTGTACATACACAATTTTCATCGATGCATTCCTCAAGAGCAATAATTTTAATCTTGTTTTGAAAATGCAAAATGAGATGATAAGCAAGGGTCTTGAATTGGATATTACTGCATATGGCACACTTATTGATGGTTGTTGCCAAAGGGAGGACATGAAGAATGCTTGTAAACTTTTCAATCAACTGTGTGAAGCAGGGTTGTCTCCAAACTATGACATTTACTATAACATGATCATGGGTTACAGAACTTTAGGTAACATAAGAGCAGCTCTCTCGTTCGAAAAGAAAATGAATGAACAAGGGATTTTACCTGATTGGCTAGCACAGTAA

Coding sequence (CDS)

ATGAGAAATTTATCAAAATCTCTGCAAATTTCGTCAACTCTATTGCGTTCTTTAATTACCCACAAACCCTTTCCTTCATCTTCAACCTCTTCATCTTGTTCAGAAACCATAATTTTCCCGGACCCAATTCCAGAGAATCGTCAAAATTTCTTTCATGATGTAAATGGTTTATTGAGCTCAAAGGATCCACCTTATGCAATGGATTTCTTCAAATGGGCTGAAAAAGAACCAGGGTTTGGCGAAAGGTTTGATTCTTTCCGTTTATTGTTGCAAGGTTTGATGGGCTTGGAGTGTCTCAAAGATACAGTGAACTATTTTTCAGACAAGAAAATCCCTGATGCTAAAACTGTGATTCAAGGCCTCAAAGATGGCTCCAACAGGATTGAGGATTCAATTAGTTGTGTTGAATGGATGCTTGTAAATAACATCCGTTTGTGGGTGCCATGTGTGAAGCATGTTATGTATGAGTCTTGGGAGTTTTATGATAAGGCGTATTATGATTCTGGTGCTAATTTGGAGCGATACTTTAAGTTAGCAAGGGATAAGGGAGTTGAATTAGATCCTGCTTCATTTAGTTGTGCAATTGGACTTGTTAGTCAAAAACCAGATTCAAATGCAGCTTGTAATTTGTTGTTGGAGATGAAGGAGAAGGGTTGGGTGCCCTCTGAGGGTTCCTACACCCAAGCTATTATCGCGTGTGTGAAACAGAGGAATTTGATGGAAGCTTTGAGACTGAAAGATGAAATGGTTTCTTGTGGGAAACCGATGAATTTGGTGGTTGCAACGATGTTGATGAAGGGGTATTGTGTATCGGGTGATTTGGAGAGTGCTTTAGGTTTGTTTGAAAAATTAGCTGAGCTTGAACTTTCACCAAATAAATCCACTTTTTCAGTTTTGATTGATGGATGCTGTATAAACGGAAATATGGAGAAAGCGTCTGAGCTTTATGATCAAATGACTGAAAAGGGTATTAAACCTAGTGGTTTTAATGTTAATTCATTGATTAAAGGGTTTCTGAAAGCCCGGTTGTTTGAGAAAGCTTATGAGATGTTTAACAAGGCGGCTGAATCTGGTTTGGTTGATGATTCCTCATTGAACAGTCTCCTATCATGTCTCTGTAAAGACGGCAATATGGATGAAGCTCAGAAGTTTTGGGGTATGGCGTTACAATGTGGAATTGAACCTAATCTACAAAATTATAACAACCTGATTCTTGGTTATTGTAGGAAAGGAAATGTTGCTATGGCACATGGAATGTATGTCCAGATGATAGCTAAGGGTTTGAATCCCAATGTTGTCACCTTTACAATATTAATGAACGGGCATATCAAGAAAGGTGAGGTAGGTAAAGCTCTGAAGATGTTTGATGAGATGTTGCAGAAGGGGATTAAGTGTACAGATCACGCGTACAATACTATAATTGGTGGATTGTGCAAAAATGGCCAGAGGATTGATTGTACAGATGACACGTACAATAGTATAATTGTCGGATTGTGCAAAAATGGCCAAACATCGCGTGCAAGGAAAATACTAGAGGATTTTATTAAGATAGATAAATTTGTACCATCTTGCCTGACTTATAATTCTATTGTTGGTGGATTAATTAACGAAGGTGATTTGGATTCTGCATTGTCTGTTTATAATGAGATGGGCGAGAAAGGAGTGTCCCCTGATCTTTGTACATACACAATTTTCATCGATGCATTCCTCAAGAGCAATAATTTTAATCTTGTTTTGAAAATGCAAAATGAGATGATAAGCAAGGGTCTTGAATTGGATATTACTGCATATGGCACACTTATTGATGGTTGTTGCCAAAGGGAGGACATGAAGAATGCTTGTAAACTTTTCAATCAACTGTGTGAAGCAGGGTTGTCTCCAAACTATGACATTTACTATAACATGATCATGGGTTACAGAACTTTAGGTAACATAAGAGCAGCTCTCTCGTTCGAAAAGAAAATGAATGAACAAGGGATTTTACCTGATTGGCTAGCACAGTAA

Protein sequence

MRNLSKSLQISSTLLRSLITHKPFPSSSTSSSCSETIIFPDPIPENRQNFFHDVNGLLSSKDPPYAMDFFKWAEKEPGFGERFDSFRLLLQGLMGLECLKDTVNYFSDKKIPDAKTVIQGLKDGSNRIEDSISCVEWMLVNNIRLWVPCVKHVMYESWEFYDKAYYDSGANLERYFKLARDKGVELDPASFSCAIGLVSQKPDSNAACNLLLEMKEKGWVPSEGSYTQAIIACVKQRNLMEALRLKDEMVSCGKPMNLVVATMLMKGYCVSGDLESALGLFEKLAELELSPNKSTFSVLIDGCCINGNMEKASELYDQMTEKGIKPSGFNVNSLIKGFLKARLFEKAYEMFNKAAESGLVDDSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEPNLQNYNNLILGYCRKGNVAMAHGMYVQMIAKGLNPNVVTFTILMNGHIKKGEVGKALKMFDEMLQKGIKCTDHAYNTIIGGLCKNGQRIDCTDDTYNSIIVGLCKNGQTSRARKILEDFIKIDKFVPSCLTYNSIVGGLINEGDLDSALSVYNEMGEKGVSPDLCTYTIFIDAFLKSNNFNLVLKMQNEMISKGLELDITAYGTLIDGCCQREDMKNACKLFNQLCEAGLSPNYDIYYNMIMGYRTLGNIRAALSFEKKMNEQGILPDWLAQ

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo12892.1	Spo12892.1	mRNA

Homology

[Close]

BLAST of Spo12892.1 vs. NCBI nr
Match: gi|902161143|gb|KNA06530.1| (hypothetical protein SOVF_180260 [Spinacia oleracea])

HSP 1 Score: 1367.8 bits (3539), Expect = 0.000e+0
Identity = 667/667 (100.00%), Postives = 667/667 (100.00%), Query Frame = 1


		  
Query: 1   MRNLSKSLQISSTLLRSLITHKPFPSSSTSSSCSETIIFPDPIPENRQNFFHDVNGLLSS 60
           MRNLSKSLQISSTLLRSLITHKPFPSSSTSSSCSETIIFPDPIPENRQNFFHDVNGLLSS
Sbjct: 1   MRNLSKSLQISSTLLRSLITHKPFPSSSTSSSCSETIIFPDPIPENRQNFFHDVNGLLSS 60

Query: 61  KDPPYAMDFFKWAEKEPGFGERFDSFRLLLQGLMGLECLKDTVNYFSDKKIPDAKTVIQG 120
           KDPPYAMDFFKWAEKEPGFGERFDSFRLLLQGLMGLECLKDTVNYFSDKKIPDAKTVIQG
Sbjct: 61  KDPPYAMDFFKWAEKEPGFGERFDSFRLLLQGLMGLECLKDTVNYFSDKKIPDAKTVIQG 120

Query: 121 LKDGSNRIEDSISCVEWMLVNNIRLWVPCVKHVMYESWEFYDKAYYDSGANLERYFKLAR 180
           LKDGSNRIEDSISCVEWMLVNNIRLWVPCVKHVMYESWEFYDKAYYDSGANLERYFKLAR
Sbjct: 121 LKDGSNRIEDSISCVEWMLVNNIRLWVPCVKHVMYESWEFYDKAYYDSGANLERYFKLAR 180

Query: 181 DKGVELDPASFSCAIGLVSQKPDSNAACNLLLEMKEKGWVPSEGSYTQAIIACVKQRNLM 240
           DKGVELDPASFSCAIGLVSQKPDSNAACNLLLEMKEKGWVPSEGSYTQAIIACVKQRNLM
Sbjct: 181 DKGVELDPASFSCAIGLVSQKPDSNAACNLLLEMKEKGWVPSEGSYTQAIIACVKQRNLM 240

Query: 241 EALRLKDEMVSCGKPMNLVVATMLMKGYCVSGDLESALGLFEKLAELELSPNKSTFSVLI 300
           EALRLKDEMVSCGKPMNLVVATMLMKGYCVSGDLESALGLFEKLAELELSPNKSTFSVLI
Sbjct: 241 EALRLKDEMVSCGKPMNLVVATMLMKGYCVSGDLESALGLFEKLAELELSPNKSTFSVLI 300

Query: 301 DGCCINGNMEKASELYDQMTEKGIKPSGFNVNSLIKGFLKARLFEKAYEMFNKAAESGLV 360
           DGCCINGNMEKASELYDQMTEKGIKPSGFNVNSLIKGFLKARLFEKAYEMFNKAAESGLV
Sbjct: 301 DGCCINGNMEKASELYDQMTEKGIKPSGFNVNSLIKGFLKARLFEKAYEMFNKAAESGLV 360

Query: 361 DDSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEPNLQNYNNLILGYCRKGNVAMAHGMY 420
           DDSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEPNLQNYNNLILGYCRKGNVAMAHGMY
Sbjct: 361 DDSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEPNLQNYNNLILGYCRKGNVAMAHGMY 420

Query: 421 VQMIAKGLNPNVVTFTILMNGHIKKGEVGKALKMFDEMLQKGIKCTDHAYNTIIGGLCKN 480
           VQMIAKGLNPNVVTFTILMNGHIKKGEVGKALKMFDEMLQKGIKCTDHAYNTIIGGLCKN
Sbjct: 421 VQMIAKGLNPNVVTFTILMNGHIKKGEVGKALKMFDEMLQKGIKCTDHAYNTIIGGLCKN 480

Query: 481 GQRIDCTDDTYNSIIVGLCKNGQTSRARKILEDFIKIDKFVPSCLTYNSIVGGLINEGDL 540
           GQRIDCTDDTYNSIIVGLCKNGQTSRARKILEDFIKIDKFVPSCLTYNSIVGGLINEGDL
Sbjct: 481 GQRIDCTDDTYNSIIVGLCKNGQTSRARKILEDFIKIDKFVPSCLTYNSIVGGLINEGDL 540

Query: 541 DSALSVYNEMGEKGVSPDLCTYTIFIDAFLKSNNFNLVLKMQNEMISKGLELDITAYGTL 600
           DSALSVYNEMGEKGVSPDLCTYTIFIDAFLKSNNFNLVLKMQNEMISKGLELDITAYGTL
Sbjct: 541 DSALSVYNEMGEKGVSPDLCTYTIFIDAFLKSNNFNLVLKMQNEMISKGLELDITAYGTL 600

Query: 601 IDGCCQREDMKNACKLFNQLCEAGLSPNYDIYYNMIMGYRTLGNIRAALSFEKKMNEQGI 660
           IDGCCQREDMKNACKLFNQLCEAGLSPNYDIYYNMIMGYRTLGNIRAALSFEKKMNEQGI
Sbjct: 601 IDGCCQREDMKNACKLFNQLCEAGLSPNYDIYYNMIMGYRTLGNIRAALSFEKKMNEQGI 660

Query: 661 LPDWLAQ 668
           LPDWLAQ
Sbjct: 661 LPDWLAQ 667

[Close]

BLAST of Spo12892.1 vs. NCBI nr
Match: gi|902148800|gb|KNA05276.1| (hypothetical protein SOVF_191910 [Spinacia oleracea])

HSP 1 Score: 963.0 bits (2488), Expect = 2.700e-277
Identity = 507/743 (68.24%), Postives = 552/743 (74.29%), Query Frame = 1


		  
Query: 1   MRNLSKSLQISSTLLRSLITHKPFPSSSTSSSCSETIIFPDPIPE--------------- 60
           MRNLSKSLQISSTLLRS +THKP  SS TS S SE +I  DPI E               
Sbjct: 1   MRNLSKSLQISSTLLRSSVTHKPLSSSLTSLSSSEPLISQDPISESSLPNQSPISNDFNE 60

Query: 61  ------------NRQNFFHDVNGLLSSKDPPYAMDFFKWAEKEPGFGERFDSFRLLLQGL 120
                       N  NF H +NGLLSSKDPP AM++FKWAEK+PGFGE  DSF LLL   
Sbjct: 61  GYSSIPISQNHQNPTNFSHGINGLLSSKDPPSAMEYFKWAEKQPGFGEGVDSFCLLLHNF 120

Query: 121 MGLECLKDTVNYF-SDKKIPDAKTVIQGLKDGSNR----------------------IED 180
           MGLE  +  V    S +  PDAKTVI+GL D SNR                      IED
Sbjct: 121 MGLEGQQCAVKELVSTQNFPDAKTVIRGLNDCSNRFGFDLDSRIYNYLLCGFIKTGRIED 180

Query: 181 SISCVEWMLVNNIRLWVPCVKHVMYE----------SWEFYDKAYYDSG----------- 240
           SISCVEWML N I LWV  +  ++YE          + E YDK +               
Sbjct: 181 SISCVEWMLENKIDLWVSYLNDLIYELGIQRKMIKEAKELYDKVFCKGNVVNGGTVRIMM 240

Query: 241 ---------ANLERYFKLARDKGVELDPASFSCAIGLVSQKPDSNAACNLLLEMKEKGWV 300
                    +  +RYF+LARDKGVELDPA+FSCAI  VSQKPDSNAAC LL+EMKEKGWV
Sbjct: 241 KACLKDGNPSEADRYFRLARDKGVELDPAAFSCAIVAVSQKPDSNAACELLMEMKEKGWV 300

Query: 301 PSEGSYTQAIIACVKQRNLMEALRLKDEMVSCGKPMNLVVATMLMKGYCVSGDLESALGL 360
           PSEG+YTQ IIACVKQRNLMEALRLKDEMVSCGKPMNLVVAT LMKGYCVSGDLESALGL
Sbjct: 301 PSEGTYTQTIIACVKQRNLMEALRLKDEMVSCGKPMNLVVATTLMKGYCVSGDLESALGL 360

Query: 361 FEKLAELELSPNKSTFSVLIDGCCINGNMEKASELYDQMTEKGIKPSGFNVNSLIKGFLK 420
           F KL E ELSPN  TFSVLIDGCCINGNMEKASELYDQM EKGI+PS +NVNS+IKGFLK
Sbjct: 361 FAKLDEYELSPNNITFSVLIDGCCINGNMEKASELYDQMIEKGIEPSVYNVNSMIKGFLK 420

Query: 421 ARLFEKAYEMFNKAAESGLVDDSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEPNLQNY 480
           ARLFEKAYEMFNKAAESGLVDDSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEPNLQNY
Sbjct: 421 ARLFEKAYEMFNKAAESGLVDDSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEPNLQNY 480

Query: 481 NNLILGYCRKGNVAMAHGMYVQMIAKGLNPNVVTFTILMNGHIKKGEVGKALKMFDEMLQ 540
           NNLILGYCRKGNVAMAH MYV+MI KGLNPNV TFTIL+NGH KKGEV KAL +FDEM  
Sbjct: 481 NNLILGYCRKGNVAMAHSMYVEMIGKGLNPNVFTFTILINGHFKKGEVDKALNLFDEM-- 540

Query: 541 KGIKCTDHAYNTIIGGLCKNGQRIDCTDDTYNSIIVGLCKNGQTSRARKILEDFIKIDKF 600
                              + QRIDCTD TYN++I GLCK+G+TS AR +LE+FIK   F
Sbjct: 541 -------------------SDQRIDCTDHTYNTMIGGLCKHGKTSLARNMLENFIKEANF 600

Query: 601 VPSCLTYNSIVGGLINEGDLDSALSVYNEMGEKGVSPDLCTYTIFIDAFLKSNNFNLVLK 660
           VPSC+TYNSIVGGLI EGDLDSALSVYNEMGE GVSPD+CTYTIFIDAF KSNNF+L LK
Sbjct: 601 VPSCMTYNSIVGGLIKEGDLDSALSVYNEMGENGVSPDICTYTIFIDAFRKSNNFDLALK 660

Query: 661 MQNEMISKGLELDITAYGTLIDGCCQREDMKNACKLFNQLCEAGLSPNYDIYYNMIMGYR 664
           MQNEMISKGLELDITAYGTLIDGCC+R DM++ACKLFN+LC++GLSPN  IY NMI GYR
Sbjct: 661 MQNEMISKGLELDITAYGTLIDGCCKRRDMESACKLFNELCKSGLSPNIYIYNNMISGYR 720

[Close]

BLAST of Spo12892.1 vs. NCBI nr
Match: gi|731322426|ref|XP_010671882.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 727.6 bits (1877), Expect = 1.900e-206
Identity = 399/746 (53.49%), Postives = 493/746 (66.09%), Query Frame = 1


		  
Query: 1   MRNLSKSLQISSTLLRSLITHKPFP-SSSTSSSCSETII-------------FPD----- 60
           M+ L+K L ISS   R    HK F  SSST SS SE +              FP      
Sbjct: 1   MKTLAKCLPISSHHFRYSTIHKQFSQSSSTFSSLSEPLTSQQPILEQIPESSFPIQSANS 60

Query: 61  ----------PIPENRQNFFHD--VNGLLSSKDPPYAMDFFKWAEKEPGFGERFDSFRLL 120
                     PI +N  N      +N L S K  P A  + +WAEK+P F    DSF +L
Sbjct: 61  TDLKEANSQIPISQNPTNLSQSDVINSLSSIKIGPSASKYLEWAEKQPEFSVGVDSF-VL 120

Query: 121 LQGLMGLECLKDTVNYF-SDKKIPDAKTVIQGLKDGSNR--------------------- 180
           L  LMGL+  K  V    S +  PD+ TVIQGL D S R                     
Sbjct: 121 LYNLMGLKGQKSAVKQLVSSQNFPDSTTVIQGLNDCSKRFDFALNSRVFNYLLYGYINAR 180

Query: 181 -IEDSISCVEWMLVNNIRLWVP---------CVKHVMYESWEFYDKAYYDS--------- 240
            IED+I C +WM  NNI   V           V ++  E+ E YDK              
Sbjct: 181 RIEDAICCFDWMFENNIHFMVSYLTVLLRVLLVNNMTKEAVELYDKVLGKGIVGNGDTVG 240

Query: 241 ---GA--------NLERYFKLARDKGVELDPASFSCAIGLVSQKPDSNAACNLLLEMKEK 300
              GA         +ERYF++ARDKGV+L+PA+++ A+G +  KPD+ AAC LL+EMK+K
Sbjct: 241 MMMGACSKDGKCTEVERYFRIARDKGVKLNPAAYTWAVGALCLKPDTKAACELLMEMKDK 300

Query: 301 GWVPSEGSYTQAIIACVKQRNLMEALRLKDEMVSCGKPMNLVVATMLMKGYCVSGDLESA 360
           GWVPS+G YT+AI+ACVKQ+N+MEALRLKD MVSCG+PMNLVVAT LMKG CVSGDLESA
Sbjct: 301 GWVPSQGIYTKAIVACVKQKNMMEALRLKDAMVSCGRPMNLVVATTLMKGCCVSGDLESA 360

Query: 361 LGLFEKLAELELSPNKSTFSVLIDGCCINGNMEKASELYDQMTEKGIKPSGFNVNSLIKG 420
           LGLF KLAE  LSPN+ T+SVLIDGCC  G+ME+A ELYDQMTE GI+ S +N+NSLIKG
Sbjct: 361 LGLFVKLAECGLSPNRVTYSVLIDGCCAKGSMEQAFELYDQMTENGIEISVYNINSLIKG 420

Query: 421 FLKARLFEKAYEMFNKAAESGLVDDSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEPNL 480
            LKA+L EKAYE+FNKAAESGL+D  S N+L S LC+DGN+DEA   WG  ++CGI+P+L
Sbjct: 421 CLKAQLLEKAYELFNKAAESGLIDVISFNTLTSWLCRDGNVDEAWHLWGKMVKCGIKPDL 480

Query: 481 QNYNNLILGYCRKGNVAMAHGMYVQMIAKGLNPNVVTFTILMNGHIKKGEVGKALKMFDE 540
             YNNLILGYC+KGNV MAH +YV+MIAKG  PNVVTFT+LM+GH + GEV KAL +FDE
Sbjct: 481 YTYNNLILGYCKKGNVTMAHSLYVEMIAKGFKPNVVTFTVLMDGHFRIGEVEKALNLFDE 540

Query: 541 MLQKGIKCTDHAYNTIIGGLCKNGQRIDCTDDTYNSIIVGLCKNGQTSRARKILEDFIKI 600
           M++                     QR+DCTD TYN+II  LC++GQTS AR +LE+F+K 
Sbjct: 541 MVK---------------------QRVDCTDYTYNTIISRLCRHGQTSHARSMLENFMKK 600

Query: 601 DKFVPSCLTYNSIVGGLINEGDLDSALSVYNEMGEKGVSPDLCTYTIFIDAFLKSNNFNL 660
            KF+PSC+TYN IV GLI EG LD+ALSVYNEMGEKG SP++ TYTI +DAF KSNN +L
Sbjct: 601 YKFIPSCMTYNIIVDGLIKEGHLDTALSVYNEMGEKGFSPNVSTYTILMDAFCKSNNIDL 660

Query: 661 VLKMQNEMISKGLELDITAYGTLIDGCCQREDMKNACKLFNQLCEAGLSPNYDIYYNMIM 664
            L+MQ EMISKG++LD+ AYGTLI+G C+R DM++AC++F++LCEAGL+PN +IY  MI 
Sbjct: 661 ALEMQKEMISKGVKLDVAAYGTLINGFCKRGDMESACRVFHELCEAGLAPNINIYNTMIR 720

[Close]

BLAST of Spo12892.1 vs. NCBI nr
Match: gi|296081998|emb|CBI21003.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 510.0 bits (1312), Expect = 6.300e-141
Identity = 269/560 (48.04%), Postives = 369/560 (65.89%), Query Frame = 1


		  
Query: 125 SNRIEDSISCVEWMLVNNIRLWVPCV---------KHVMYESWEFYDKA-----YYDSGA 184
           +NRIE++I C   M+  ++  WVP +         ++++ E  + Y+K      Y D   
Sbjct: 163 ANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFT 222

Query: 185 ---------------NLERYFKLARDKGVELDPASFSCAIGLVSQKPDSNAACNLLLEMK 244
                            E YF+  +++GV+LD  ++S  I  V +KP+SN    LL EMK
Sbjct: 223 VHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMK 282

Query: 245 EKGWVPSEGSYTQAIIACVKQRNLMEALRLKDEMVSCGKPMNLVVATMLMKGYCVSGDLE 304
           E+GWVPSE ++T  I+ACV Q N++EALRLK+EM++CGKPMNLVVAT LMKGYC  G+L+
Sbjct: 283 ERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLD 342

Query: 305 SALGLFEKLAELELSPNKSTFSVLIDGCCINGNMEKASELYDQMTEKGIKPSGFNVNSLI 364
           SAL LF K+ E  L PNK T+SVLI+GCC +GN+EKASELY QM   GI PS FNVNSL+
Sbjct: 343 SALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLL 402

Query: 365 KGFLKARLFEKAYEMFNKAAESGLVDDSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEP 424
           +G+LKA L+E+A ++F++A + G+ +  + N ++S LCK G MDEA       +  G+ P
Sbjct: 403 RGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVP 462

Query: 425 NLQNYNNLILGYCRKGNVAMAHGMYVQMIAKGLNPNVVTFTILMNGHIKKGEVGKALKMF 484
           N+ +YN++ILG+CRKGN+ MA  ++  M+A+ L PNVVT++IL++G+ KKG+  KAL +F
Sbjct: 463 NVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLF 522

Query: 485 DEMLQKGIKCTDHAYNTIIGGLCKNGQRIDCTDDTYNSIIVGLCKNGQTSRARKILEDFI 544
           D+ML   I  TD  +NTII                      GLCK GQ S AR  L++F+
Sbjct: 523 DQMLSLNIAPTDFTFNTIIN---------------------GLCKVGQMSEARDKLKNFL 582

Query: 545 KIDKFVPSCLTYNSIVGGLINEGDLDSALSVYNEMGEKGVSPDLCTYTIFIDAFLKSNNF 604
           + + F+PSC+TYNSIV G I EG++DSAL+VY EM E GVSP++ TYT  I+ F KSN  
Sbjct: 583 E-EGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRI 642

Query: 605 NLVLKMQNEMISKGLELDITAYGTLIDGCCQREDMKNACKLFNQLCEAGLSPNYDIYYNM 656
           +L LK ++EM  KGLELD+TAY  LIDG C+R DM++A  LF +L E GLSPN  +Y +M
Sbjct: 643 DLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSM 700

[Close]

BLAST of Spo12892.1 vs. NCBI nr
Match: gi|359476104|ref|XP_003631789.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like isoform X1 [Vitis vinifera])

HSP 1 Score: 510.0 bits (1312), Expect = 6.300e-141
Identity = 269/560 (48.04%), Postives = 369/560 (65.89%), Query Frame = 1


		  
Query: 125 SNRIEDSISCVEWMLVNNIRLWVPCV---------KHVMYESWEFYDKA-----YYDSGA 184
           +NRIE++I C   M+  ++  WVP +         ++++ E  + Y+K      Y D   
Sbjct: 203 ANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFT 262

Query: 185 ---------------NLERYFKLARDKGVELDPASFSCAIGLVSQKPDSNAACNLLLEMK 244
                            E YF+  +++GV+LD  ++S  I  V +KP+SN    LL EMK
Sbjct: 263 VHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMK 322

Query: 245 EKGWVPSEGSYTQAIIACVKQRNLMEALRLKDEMVSCGKPMNLVVATMLMKGYCVSGDLE 304
           E+GWVPSE ++T  I+ACV Q N++EALRLK+EM++CGKPMNLVVAT LMKGYC  G+L+
Sbjct: 323 ERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLD 382

Query: 305 SALGLFEKLAELELSPNKSTFSVLIDGCCINGNMEKASELYDQMTEKGIKPSGFNVNSLI 364
           SAL LF K+ E  L PNK T+SVLI+GCC +GN+EKASELY QM   GI PS FNVNSL+
Sbjct: 383 SALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLL 442

Query: 365 KGFLKARLFEKAYEMFNKAAESGLVDDSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEP 424
           +G+LKA L+E+A ++F++A + G+ +  + N ++S LCK G MDEA       +  G+ P
Sbjct: 443 RGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVP 502

Query: 425 NLQNYNNLILGYCRKGNVAMAHGMYVQMIAKGLNPNVVTFTILMNGHIKKGEVGKALKMF 484
           N+ +YN++ILG+CRKGN+ MA  ++  M+A+ L PNVVT++IL++G+ KKG+  KAL +F
Sbjct: 503 NVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLF 562

Query: 485 DEMLQKGIKCTDHAYNTIIGGLCKNGQRIDCTDDTYNSIIVGLCKNGQTSRARKILEDFI 544
           D+ML   I  TD  +NTII                      GLCK GQ S AR  L++F+
Sbjct: 563 DQMLSLNIAPTDFTFNTIIN---------------------GLCKVGQMSEARDKLKNFL 622

Query: 545 KIDKFVPSCLTYNSIVGGLINEGDLDSALSVYNEMGEKGVSPDLCTYTIFIDAFLKSNNF 604
           + + F+PSC+TYNSIV G I EG++DSAL+VY EM E GVSP++ TYT  I+ F KSN  
Sbjct: 623 E-EGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRI 682

Query: 605 NLVLKMQNEMISKGLELDITAYGTLIDGCCQREDMKNACKLFNQLCEAGLSPNYDIYYNM 656
           +L LK ++EM  KGLELD+TAY  LIDG C+R DM++A  LF +L E GLSPN  +Y +M
Sbjct: 683 DLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSM 740

[Close]

BLAST of Spo12892.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QH28_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_180260 PE=4 SV=1)

HSP 1 Score: 1367.8 bits (3539), Expect = 0.000e+0
Identity = 667/667 (100.00%), Postives = 667/667 (100.00%), Query Frame = 1


		  
Query: 1   MRNLSKSLQISSTLLRSLITHKPFPSSSTSSSCSETIIFPDPIPENRQNFFHDVNGLLSS 60
           MRNLSKSLQISSTLLRSLITHKPFPSSSTSSSCSETIIFPDPIPENRQNFFHDVNGLLSS
Sbjct: 1   MRNLSKSLQISSTLLRSLITHKPFPSSSTSSSCSETIIFPDPIPENRQNFFHDVNGLLSS 60

Query: 61  KDPPYAMDFFKWAEKEPGFGERFDSFRLLLQGLMGLECLKDTVNYFSDKKIPDAKTVIQG 120
           KDPPYAMDFFKWAEKEPGFGERFDSFRLLLQGLMGLECLKDTVNYFSDKKIPDAKTVIQG
Sbjct: 61  KDPPYAMDFFKWAEKEPGFGERFDSFRLLLQGLMGLECLKDTVNYFSDKKIPDAKTVIQG 120

Query: 121 LKDGSNRIEDSISCVEWMLVNNIRLWVPCVKHVMYESWEFYDKAYYDSGANLERYFKLAR 180
           LKDGSNRIEDSISCVEWMLVNNIRLWVPCVKHVMYESWEFYDKAYYDSGANLERYFKLAR
Sbjct: 121 LKDGSNRIEDSISCVEWMLVNNIRLWVPCVKHVMYESWEFYDKAYYDSGANLERYFKLAR 180

Query: 181 DKGVELDPASFSCAIGLVSQKPDSNAACNLLLEMKEKGWVPSEGSYTQAIIACVKQRNLM 240
           DKGVELDPASFSCAIGLVSQKPDSNAACNLLLEMKEKGWVPSEGSYTQAIIACVKQRNLM
Sbjct: 181 DKGVELDPASFSCAIGLVSQKPDSNAACNLLLEMKEKGWVPSEGSYTQAIIACVKQRNLM 240

Query: 241 EALRLKDEMVSCGKPMNLVVATMLMKGYCVSGDLESALGLFEKLAELELSPNKSTFSVLI 300
           EALRLKDEMVSCGKPMNLVVATMLMKGYCVSGDLESALGLFEKLAELELSPNKSTFSVLI
Sbjct: 241 EALRLKDEMVSCGKPMNLVVATMLMKGYCVSGDLESALGLFEKLAELELSPNKSTFSVLI 300

Query: 301 DGCCINGNMEKASELYDQMTEKGIKPSGFNVNSLIKGFLKARLFEKAYEMFNKAAESGLV 360
           DGCCINGNMEKASELYDQMTEKGIKPSGFNVNSLIKGFLKARLFEKAYEMFNKAAESGLV
Sbjct: 301 DGCCINGNMEKASELYDQMTEKGIKPSGFNVNSLIKGFLKARLFEKAYEMFNKAAESGLV 360

Query: 361 DDSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEPNLQNYNNLILGYCRKGNVAMAHGMY 420
           DDSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEPNLQNYNNLILGYCRKGNVAMAHGMY
Sbjct: 361 DDSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEPNLQNYNNLILGYCRKGNVAMAHGMY 420

Query: 421 VQMIAKGLNPNVVTFTILMNGHIKKGEVGKALKMFDEMLQKGIKCTDHAYNTIIGGLCKN 480
           VQMIAKGLNPNVVTFTILMNGHIKKGEVGKALKMFDEMLQKGIKCTDHAYNTIIGGLCKN
Sbjct: 421 VQMIAKGLNPNVVTFTILMNGHIKKGEVGKALKMFDEMLQKGIKCTDHAYNTIIGGLCKN 480

Query: 481 GQRIDCTDDTYNSIIVGLCKNGQTSRARKILEDFIKIDKFVPSCLTYNSIVGGLINEGDL 540
           GQRIDCTDDTYNSIIVGLCKNGQTSRARKILEDFIKIDKFVPSCLTYNSIVGGLINEGDL
Sbjct: 481 GQRIDCTDDTYNSIIVGLCKNGQTSRARKILEDFIKIDKFVPSCLTYNSIVGGLINEGDL 540

Query: 541 DSALSVYNEMGEKGVSPDLCTYTIFIDAFLKSNNFNLVLKMQNEMISKGLELDITAYGTL 600
           DSALSVYNEMGEKGVSPDLCTYTIFIDAFLKSNNFNLVLKMQNEMISKGLELDITAYGTL
Sbjct: 541 DSALSVYNEMGEKGVSPDLCTYTIFIDAFLKSNNFNLVLKMQNEMISKGLELDITAYGTL 600

Query: 601 IDGCCQREDMKNACKLFNQLCEAGLSPNYDIYYNMIMGYRTLGNIRAALSFEKKMNEQGI 660
           IDGCCQREDMKNACKLFNQLCEAGLSPNYDIYYNMIMGYRTLGNIRAALSFEKKMNEQGI
Sbjct: 601 IDGCCQREDMKNACKLFNQLCEAGLSPNYDIYYNMIMGYRTLGNIRAALSFEKKMNEQGI 660

Query: 661 LPDWLAQ 668
           LPDWLAQ
Sbjct: 661 LPDWLAQ 667

[Close]

BLAST of Spo12892.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFE8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_191910 PE=4 SV=1)

HSP 1 Score: 963.0 bits (2488), Expect = 1.900e-277
Identity = 507/743 (68.24%), Postives = 552/743 (74.29%), Query Frame = 1


		  
Query: 1   MRNLSKSLQISSTLLRSLITHKPFPSSSTSSSCSETIIFPDPIPE--------------- 60
           MRNLSKSLQISSTLLRS +THKP  SS TS S SE +I  DPI E               
Sbjct: 1   MRNLSKSLQISSTLLRSSVTHKPLSSSLTSLSSSEPLISQDPISESSLPNQSPISNDFNE 60

Query: 61  ------------NRQNFFHDVNGLLSSKDPPYAMDFFKWAEKEPGFGERFDSFRLLLQGL 120
                       N  NF H +NGLLSSKDPP AM++FKWAEK+PGFGE  DSF LLL   
Sbjct: 61  GYSSIPISQNHQNPTNFSHGINGLLSSKDPPSAMEYFKWAEKQPGFGEGVDSFCLLLHNF 120

Query: 121 MGLECLKDTVNYF-SDKKIPDAKTVIQGLKDGSNR----------------------IED 180
           MGLE  +  V    S +  PDAKTVI+GL D SNR                      IED
Sbjct: 121 MGLEGQQCAVKELVSTQNFPDAKTVIRGLNDCSNRFGFDLDSRIYNYLLCGFIKTGRIED 180

Query: 181 SISCVEWMLVNNIRLWVPCVKHVMYE----------SWEFYDKAYYDSG----------- 240
           SISCVEWML N I LWV  +  ++YE          + E YDK +               
Sbjct: 181 SISCVEWMLENKIDLWVSYLNDLIYELGIQRKMIKEAKELYDKVFCKGNVVNGGTVRIMM 240

Query: 241 ---------ANLERYFKLARDKGVELDPASFSCAIGLVSQKPDSNAACNLLLEMKEKGWV 300
                    +  +RYF+LARDKGVELDPA+FSCAI  VSQKPDSNAAC LL+EMKEKGWV
Sbjct: 241 KACLKDGNPSEADRYFRLARDKGVELDPAAFSCAIVAVSQKPDSNAACELLMEMKEKGWV 300

Query: 301 PSEGSYTQAIIACVKQRNLMEALRLKDEMVSCGKPMNLVVATMLMKGYCVSGDLESALGL 360
           PSEG+YTQ IIACVKQRNLMEALRLKDEMVSCGKPMNLVVAT LMKGYCVSGDLESALGL
Sbjct: 301 PSEGTYTQTIIACVKQRNLMEALRLKDEMVSCGKPMNLVVATTLMKGYCVSGDLESALGL 360

Query: 361 FEKLAELELSPNKSTFSVLIDGCCINGNMEKASELYDQMTEKGIKPSGFNVNSLIKGFLK 420
           F KL E ELSPN  TFSVLIDGCCINGNMEKASELYDQM EKGI+PS +NVNS+IKGFLK
Sbjct: 361 FAKLDEYELSPNNITFSVLIDGCCINGNMEKASELYDQMIEKGIEPSVYNVNSMIKGFLK 420

Query: 421 ARLFEKAYEMFNKAAESGLVDDSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEPNLQNY 480
           ARLFEKAYEMFNKAAESGLVDDSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEPNLQNY
Sbjct: 421 ARLFEKAYEMFNKAAESGLVDDSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEPNLQNY 480

Query: 481 NNLILGYCRKGNVAMAHGMYVQMIAKGLNPNVVTFTILMNGHIKKGEVGKALKMFDEMLQ 540
           NNLILGYCRKGNVAMAH MYV+MI KGLNPNV TFTIL+NGH KKGEV KAL +FDEM  
Sbjct: 481 NNLILGYCRKGNVAMAHSMYVEMIGKGLNPNVFTFTILINGHFKKGEVDKALNLFDEM-- 540

Query: 541 KGIKCTDHAYNTIIGGLCKNGQRIDCTDDTYNSIIVGLCKNGQTSRARKILEDFIKIDKF 600
                              + QRIDCTD TYN++I GLCK+G+TS AR +LE+FIK   F
Sbjct: 541 -------------------SDQRIDCTDHTYNTMIGGLCKHGKTSLARNMLENFIKEANF 600

Query: 601 VPSCLTYNSIVGGLINEGDLDSALSVYNEMGEKGVSPDLCTYTIFIDAFLKSNNFNLVLK 660
           VPSC+TYNSIVGGLI EGDLDSALSVYNEMGE GVSPD+CTYTIFIDAF KSNNF+L LK
Sbjct: 601 VPSCMTYNSIVGGLIKEGDLDSALSVYNEMGENGVSPDICTYTIFIDAFRKSNNFDLALK 660

Query: 661 MQNEMISKGLELDITAYGTLIDGCCQREDMKNACKLFNQLCEAGLSPNYDIYYNMIMGYR 664
           MQNEMISKGLELDITAYGTLIDGCC+R DM++ACKLFN+LC++GLSPN  IY NMI GYR
Sbjct: 661 MQNEMISKGLELDITAYGTLIDGCCKRRDMESACKLFNELCKSGLSPNIYIYNNMISGYR 720

[Close]

BLAST of Spo12892.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FKF7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g055460 PE=4 SV=1)

HSP 1 Score: 727.6 bits (1877), Expect = 1.300e-206
Identity = 399/746 (53.49%), Postives = 493/746 (66.09%), Query Frame = 1


		  
Query: 1   MRNLSKSLQISSTLLRSLITHKPFP-SSSTSSSCSETII-------------FPD----- 60
           M+ L+K L ISS   R    HK F  SSST SS SE +              FP      
Sbjct: 1   MKTLAKCLPISSHHFRYSTIHKQFSQSSSTFSSLSEPLTSQQPILEQIPESSFPIQSANS 60

Query: 61  ----------PIPENRQNFFHD--VNGLLSSKDPPYAMDFFKWAEKEPGFGERFDSFRLL 120
                     PI +N  N      +N L S K  P A  + +WAEK+P F    DSF +L
Sbjct: 61  TDLKEANSQIPISQNPTNLSQSDVINSLSSIKIGPSASKYLEWAEKQPEFSVGVDSF-VL 120

Query: 121 LQGLMGLECLKDTVNYF-SDKKIPDAKTVIQGLKDGSNR--------------------- 180
           L  LMGL+  K  V    S +  PD+ TVIQGL D S R                     
Sbjct: 121 LYNLMGLKGQKSAVKQLVSSQNFPDSTTVIQGLNDCSKRFDFALNSRVFNYLLYGYINAR 180

Query: 181 -IEDSISCVEWMLVNNIRLWVP---------CVKHVMYESWEFYDKAYYDS--------- 240
            IED+I C +WM  NNI   V           V ++  E+ E YDK              
Sbjct: 181 RIEDAICCFDWMFENNIHFMVSYLTVLLRVLLVNNMTKEAVELYDKVLGKGIVGNGDTVG 240

Query: 241 ---GA--------NLERYFKLARDKGVELDPASFSCAIGLVSQKPDSNAACNLLLEMKEK 300
              GA         +ERYF++ARDKGV+L+PA+++ A+G +  KPD+ AAC LL+EMK+K
Sbjct: 241 MMMGACSKDGKCTEVERYFRIARDKGVKLNPAAYTWAVGALCLKPDTKAACELLMEMKDK 300

Query: 301 GWVPSEGSYTQAIIACVKQRNLMEALRLKDEMVSCGKPMNLVVATMLMKGYCVSGDLESA 360
           GWVPS+G YT+AI+ACVKQ+N+MEALRLKD MVSCG+PMNLVVAT LMKG CVSGDLESA
Sbjct: 301 GWVPSQGIYTKAIVACVKQKNMMEALRLKDAMVSCGRPMNLVVATTLMKGCCVSGDLESA 360

Query: 361 LGLFEKLAELELSPNKSTFSVLIDGCCINGNMEKASELYDQMTEKGIKPSGFNVNSLIKG 420
           LGLF KLAE  LSPN+ T+SVLIDGCC  G+ME+A ELYDQMTE GI+ S +N+NSLIKG
Sbjct: 361 LGLFVKLAECGLSPNRVTYSVLIDGCCAKGSMEQAFELYDQMTENGIEISVYNINSLIKG 420

Query: 421 FLKARLFEKAYEMFNKAAESGLVDDSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEPNL 480
            LKA+L EKAYE+FNKAAESGL+D  S N+L S LC+DGN+DEA   WG  ++CGI+P+L
Sbjct: 421 CLKAQLLEKAYELFNKAAESGLIDVISFNTLTSWLCRDGNVDEAWHLWGKMVKCGIKPDL 480

Query: 481 QNYNNLILGYCRKGNVAMAHGMYVQMIAKGLNPNVVTFTILMNGHIKKGEVGKALKMFDE 540
             YNNLILGYC+KGNV MAH +YV+MIAKG  PNVVTFT+LM+GH + GEV KAL +FDE
Sbjct: 481 YTYNNLILGYCKKGNVTMAHSLYVEMIAKGFKPNVVTFTVLMDGHFRIGEVEKALNLFDE 540

Query: 541 MLQKGIKCTDHAYNTIIGGLCKNGQRIDCTDDTYNSIIVGLCKNGQTSRARKILEDFIKI 600
           M++                     QR+DCTD TYN+II  LC++GQTS AR +LE+F+K 
Sbjct: 541 MVK---------------------QRVDCTDYTYNTIISRLCRHGQTSHARSMLENFMKK 600

Query: 601 DKFVPSCLTYNSIVGGLINEGDLDSALSVYNEMGEKGVSPDLCTYTIFIDAFLKSNNFNL 660
            KF+PSC+TYN IV GLI EG LD+ALSVYNEMGEKG SP++ TYTI +DAF KSNN +L
Sbjct: 601 YKFIPSCMTYNIIVDGLIKEGHLDTALSVYNEMGEKGFSPNVSTYTILMDAFCKSNNIDL 660

Query: 661 VLKMQNEMISKGLELDITAYGTLIDGCCQREDMKNACKLFNQLCEAGLSPNYDIYYNMIM 664
            L+MQ EMISKG++LD+ AYGTLI+G C+R DM++AC++F++LCEAGL+PN +IY  MI 
Sbjct: 661 ALEMQKEMISKGVKLDVAAYGTLINGFCKRGDMESACRVFHELCEAGLAPNINIYNTMIR 720

[Close]

BLAST of Spo12892.1 vs. UniProtKB/TrEMBL
Match: D7SUQ4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g05050 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 4.400e-141
Identity = 269/560 (48.04%), Postives = 369/560 (65.89%), Query Frame = 1


		  
Query: 125 SNRIEDSISCVEWMLVNNIRLWVPCV---------KHVMYESWEFYDKA-----YYDSGA 184
           +NRIE++I C   M+  ++  WVP +         ++++ E  + Y+K      Y D   
Sbjct: 163 ANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFT 222

Query: 185 ---------------NLERYFKLARDKGVELDPASFSCAIGLVSQKPDSNAACNLLLEMK 244
                            E YF+  +++GV+LD  ++S  I  V +KP+SN    LL EMK
Sbjct: 223 VHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMK 282

Query: 245 EKGWVPSEGSYTQAIIACVKQRNLMEALRLKDEMVSCGKPMNLVVATMLMKGYCVSGDLE 304
           E+GWVPSE ++T  I+ACV Q N++EALRLK+EM++CGKPMNLVVAT LMKGYC  G+L+
Sbjct: 283 ERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLD 342

Query: 305 SALGLFEKLAELELSPNKSTFSVLIDGCCINGNMEKASELYDQMTEKGIKPSGFNVNSLI 364
           SAL LF K+ E  L PNK T+SVLI+GCC +GN+EKASELY QM   GI PS FNVNSL+
Sbjct: 343 SALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLL 402

Query: 365 KGFLKARLFEKAYEMFNKAAESGLVDDSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEP 424
           +G+LKA L+E+A ++F++A + G+ +  + N ++S LCK G MDEA       +  G+ P
Sbjct: 403 RGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVP 462

Query: 425 NLQNYNNLILGYCRKGNVAMAHGMYVQMIAKGLNPNVVTFTILMNGHIKKGEVGKALKMF 484
           N+ +YN++ILG+CRKGN+ MA  ++  M+A+ L PNVVT++IL++G+ KKG+  KAL +F
Sbjct: 463 NVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLF 522

Query: 485 DEMLQKGIKCTDHAYNTIIGGLCKNGQRIDCTDDTYNSIIVGLCKNGQTSRARKILEDFI 544
           D+ML   I  TD  +NTII                      GLCK GQ S AR  L++F+
Sbjct: 523 DQMLSLNIAPTDFTFNTIIN---------------------GLCKVGQMSEARDKLKNFL 582

Query: 545 KIDKFVPSCLTYNSIVGGLINEGDLDSALSVYNEMGEKGVSPDLCTYTIFIDAFLKSNNF 604
           + + F+PSC+TYNSIV G I EG++DSAL+VY EM E GVSP++ TYT  I+ F KSN  
Sbjct: 583 E-EGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRI 642

Query: 605 NLVLKMQNEMISKGLELDITAYGTLIDGCCQREDMKNACKLFNQLCEAGLSPNYDIYYNM 656
           +L LK ++EM  KGLELD+TAY  LIDG C+R DM++A  LF +L E GLSPN  +Y +M
Sbjct: 643 DLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSM 700

[Close]

BLAST of Spo12892.1 vs. UniProtKB/TrEMBL
Match: W9R5M4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016452 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 8.000e-135
Identity = 270/666 (40.54%), Postives = 386/666 (57.96%), Query Frame = 1


		  
Query: 52  HDVNGLLSSKDPPY-AMDFFKWAEKEPGFGERFDSFRLLLQGLMGLECLKDTVN-----Y 111
           H +N LLS K+ PY A+ +FKWAE+  GF    DSF +LL  LMG +    +       Y
Sbjct: 88  HVINTLLSHKNDPYSALKYFKWAERMRGFIRGVDSFSVLLHILMGSQETHGSAQSLLSLY 147

Query: 112 FSDKKIPDAKTVIQGLKD----------------------GSNRIEDSISCVEWMLVNNI 171
            S    P A   +  L D                       +NRI D++ C   M+ ++I
Sbjct: 148 VSGDSGPSANVFVDHLFDCAKRFEFEPDSRIFNYLLNSYIRANRIRDAVHCFNKMVEHDI 207

Query: 172 RLWVPCVK-------------------HVMYESWEFYDKAYY----------DSGANLER 231
             WVP +                    H M     F D+             +     E+
Sbjct: 208 LPWVPFMNILLTALIRRNMSREALDLHHKMVLRGVFGDRVTVPVLMRACLKKEREEEAEK 267

Query: 232 YFKLARDKGVELDPASFSCAIGLVSQKPDSNAACNLLLEMKEKGWVPSEGSYTQAIIACV 291
           YF+ A  +G+ELD A++S  I    +KP+   A  LL EM++  WVPSEG++T  + ACV
Sbjct: 268 YFREATVRGIELDAAAYSFLIQAFCKKPNCKVASELLKEMRDMSWVPSEGTFTSVVTACV 327

Query: 292 KQRNLMEALRLKDEMVSCGKPMNLVVATMLMKGYCVSGDLESALGLFEKLAELELSPNKS 351
           KQ N++EAL++KD+MVSCGKP+N+VV T LMKGYCV G L SAL L  K+ E  +SPNK 
Sbjct: 328 KQGNMVEALKVKDQMVSCGKPLNVVVLTSLMKGYCVQGYLSSALNLLYKMNEYGVSPNKI 387

Query: 352 TFSVLIDGCCINGNMEKASELYDQMTEKGIKPSGFNVNSLIKGFLKARLFEKAYEMFNKA 411
           T++VLI+    NG+MEKA ELY++M    I+P  + +N L+ G LK + FE A ++FN+A
Sbjct: 388 TYAVLIEWFSKNGDMEKAFELYNRMKITNIQPDAYVMNWLLHGLLKFQKFEDASKLFNEA 447

Query: 412 AESGLVDDSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEPNLQNYNNLILGYCRKGNVA 471
            E G+ +    N+LL+ LC +G ++EA   W   +   + PN+ +Y+++IL +CRKG + 
Sbjct: 448 VECGVANTFLYNTLLNSLCNEGKVNEACALWDNMISKDVVPNVVSYSSMILCHCRKGALD 507

Query: 472 MAHGMYVQMIAKGLNPNVVTFTILMNGHIKKGEVGKALKMFDEMLQKGIKCTDHAYNTII 531
           MAH ++ +M+ + + P+V T++IL++G  KKG+V +A  ++++M+   I  TD+ YNTII
Sbjct: 508 MAHNLFTEMLERSVKPDVFTYSILIDGCFKKGDVKRAFNVYEQMMAVNIAPTDYTYNTII 567

Query: 532 GGLCKNGQRIDCTDDTYNSIIVGLCKNGQTSRARKILEDFIKIDKFVPSCLTYNSIVGGL 591
                                 GLC+ G+ S AR  L+ ++K   F+P CLTYNSI+ G 
Sbjct: 568 N---------------------GLCRVGRASEARDELKKYVK-KGFIPVCLTYNSIINGF 627

Query: 592 INEGDLDSALSVYNEMGEKGVSPDLCTYTIFIDAFLKSNNFNLVLKMQNEMISKGLELDI 651
             +GD +SAL VY EM E GVSP++ TYT  I+ FLKS N  L LKM+NEM  KG++LD+
Sbjct: 628 TKKGDTNSALEVYREMCEGGVSPNVVTYTSLIEGFLKSKNMALALKMRNEMKDKGIKLDV 687

Query: 652 TAYGTLIDGCCQREDMKNACKLFNQLCEAGLSPNYDIYYNMIMGYRTLGNIRAALSFEKK 661
           TAYG LIDG C+  D+  A +LF++L E G SPN  IY +MI G+RTLGN+ AAL   K+
Sbjct: 688 TAYGALIDGFCKGRDIVTAYELFSELLEVGSSPNTTIYTSMICGFRTLGNMEAALRLHKR 731

[Close]

BLAST of Spo12892.1 vs. ExPASy Swiss-Prot
Match: PP282_ARATH (Pentatricopeptide repeat-containing protein At3g54980, mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 3.400e-102
Identity = 202/486 (41.56%), Postives = 305/486 (62.76%), Query Frame = 1


		  
Query: 179 ARDKGVELDPASFSCAIGLVSQKPDSNAACNLLLEMKEKGW-VPSEGSYTQAIIACVKQR 238
           A ++G E D   +S A+    +  D   A +LL EMKEK   VPS+ +YT  I+A VKQ 
Sbjct: 259 AIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQG 318

Query: 239 NLMEALRLKDEMVSCGKPMNLVVATMLMKGYCVSGDLESALGLFEKLAELELSPNKSTFS 298
           N+ +A+RLKDEM+S G  MN+V AT L+ G+C + DL SAL LF+K+ +   SPN  TFS
Sbjct: 319 NMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFS 378

Query: 299 VLIDGCCINGNMEKASELYDQMTEKGIKPSGFNVNSLIKGFLKARLFEKAYEMFNKAAES 358
           VLI+    NG MEKA E Y +M   G+ PS F+V+++I+G+LK +  E+A ++F+++ E+
Sbjct: 379 VLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFET 438

Query: 359 GLVDDSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEPNLQNYNNLILGYCRKGNVAMAH 418
           GL +    N++LS LCK G  DEA +        GI PN+ +YNN++LG+CR+ N+ +A 
Sbjct: 439 GLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLAR 498

Query: 419 GMYVQMIAKGLNPNVVTFTILMNGHIKKGEVGKALKMFDEMLQKGIKCTDHAYNTIIGGL 478
            ++  ++ KGL PN  T++IL++G  +  +   AL++ + M    I+     Y TII   
Sbjct: 499 IVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIIN-- 558

Query: 479 CKNGQRIDCTDDTYNSIIVGLCKNGQTSRARKILEDFIKIDKFVPSCLTYNSIVGGLINE 538
                              GLCK GQTS+AR++L + I+  +   SC++YNSI+ G   E
Sbjct: 559 -------------------GLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKE 618

Query: 539 GDLDSALSVYNEMGEKGVSPDLCTYTIFIDAFLKSNNFNLVLKMQNEMISKGLELDITAY 598
           G++DSA++ Y EM   G+SP++ TYT  ++   K+N  +  L+M++EM +KG++LDI AY
Sbjct: 619 GEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAY 678

Query: 599 GTLIDGCCQREDMKNACKLFNQLCEAGLSPNYDIYYNMIMGYRTLGNIRAALSFEKKMNE 658
           G LIDG C+R +M++A  LF++L E GL+P+  IY ++I G+R LGN+ AAL   KKM +
Sbjct: 679 GALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLK 723

Query: 659 QGILPD 664
            G+  D
Sbjct: 739 DGLRCD 723

[Close]

BLAST of Spo12892.1 vs. ExPASy Swiss-Prot
Match: PP194_ARATH (Pentatricopeptide repeat-containing protein At2g39230, mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.400e-100
Identity = 199/491 (40.53%), Postives = 287/491 (58.45%), Query Frame = 1


		  
Query: 174 RYFKLARDKGVELDPASFSCAIGLVSQKPDSNAACNLLLEMKEKGWVP-SEGSYTQAIIA 233
           + F+    +G E D   FS A+    + PD   A +LL EM+ K  VP S+ +YT  I+A
Sbjct: 260 KIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVA 319

Query: 234 CVKQRNLMEALRLKDEMVSCGKPMNLVVATMLMKGYCVSGDLESALGLFEKLAELELSPN 293
            VK+ N+ EA+R+ DEMV  G PM+++ AT L+ GYC   +L  AL LF ++ E  L+P+
Sbjct: 320 FVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPD 379

Query: 294 KSTFSVLIDGCCINGNMEKASELYDQMTEKGIKPSGFNVNSLIKGFLKARLFEKAYEMFN 353
           K  FSV+++  C N  MEKA E Y +M    I PS   V+++I+G LKA   E A E+FN
Sbjct: 380 KVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFN 439

Query: 354 KAAESGLVDDSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEPNLQNYNNLILGYCRKGN 413
            + ES +      N +    CK G +D A  F  M  Q GIEPN+  YNN++L +CR  N
Sbjct: 440 DSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKN 499

Query: 414 VAMAHGMYVQMIAKGLNPNVVTFTILMNGHIKKGEVGKALKMFDEMLQKGIKCTDHAYNT 473
           + +A  ++ +M+ KGL PN  T++IL++G  K  +   A  + ++M              
Sbjct: 500 MDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQM-------------- 559

Query: 474 IIGGLCKNGQRIDCTDDTYNSIIVGLCKNGQTSRARKILEDFIKIDKFVPSCLTYNSIVG 533
                  N    +  +  YN+II GLCK GQTS+A+++L++ IK  ++  SC +YNSI+ 
Sbjct: 560 -------NASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIID 619

Query: 534 GLINEGDLDSALSVYNEMGEKGVSPDLCTYTIFIDAFLKSNNFNLVLKMQNEMISKGLEL 593
           G +  GD DSA+  Y EM E G SP++ T+T  I+ F KSN  +L L+M +EM S  L+L
Sbjct: 620 GFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKL 679

Query: 594 DITAYGTLIDGCCQREDMKNACKLFNQLCEAGLSPNYDIYYNMIMGYRTLGNIRAALSFE 653
           D+ AYG LIDG C++ DMK A  LF++L E GL PN  +Y ++I G+R LG + AA+   
Sbjct: 680 DLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLY 729

Query: 654 KKMNEQGILPD 664
           KKM   GI  D
Sbjct: 740 KKMVNDGISCD 729

[Close]

BLAST of Spo12892.1 vs. ExPASy Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 4.600e-59
Identity = 121/392 (30.87%), Postives = 214/392 (54.59%), Query Frame = 1


		  
Query: 273 DLESALGLFEKLAELELSPNKSTFSVLIDGCCINGNMEKASELYDQMTEKGIKPSGFNVN 332
           ++  A  +F+++ E ++SPN  T+++LI G C  GN++ A  L+D+M  KG  P+    N
Sbjct: 185 NISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYN 244

Query: 333 SLIKGFLKARLFEKAYEMFNKAAESGLVDDS-SLNSLLSCLCKDGNMDEAQKFWGMALQC 392
           +LI G+ K R  +  +++    A  GL  +  S N +++ LC++G M E         + 
Sbjct: 245 TLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 304

Query: 393 GIEPNLQNYNNLILGYCRKGNVAMAHGMYVQMIAKGLNPNVVTFTILMNGHIKKGEVGKA 452
           G   +   YN LI GYC++GN   A  M+ +M+  GL P+V+T+T L++   K G + +A
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364

Query: 453 LKMFDEMLQKGIKCTDHAYNTIIGGLCKNGQRIDCTDDTYNSIIVGLCKNGQTSRARKIL 512
           ++  D+M               + GLC N       + TY +++ G  + G  + A ++L
Sbjct: 365 MEFLDQMR--------------VRGLCPN-------ERTYTTLVDGFSQKGYMNEAYRVL 424

Query: 513 EDFIKIDKFVPSCLTYNSIVGGLINEGDLDSALSVYNEMGEKGVSPDLCTYTIFIDAFLK 572
            + +  + F PS +TYN+++ G    G ++ A++V  +M EKG+SPD+ +Y+  +  F +
Sbjct: 425 RE-MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 484

Query: 573 SNNFNLVLKMQNEMISKGLELDITAYGTLIDGCCQREDMKNACKLFNQLCEAGLSPNYDI 632
           S + +  L+++ EM+ KG++ D   Y +LI G C++   K AC L+ ++   GL P+   
Sbjct: 485 SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT 544

Query: 633 YYNMIMGYRTLGNIRAALSFEKKMNEQGILPD 664
           Y  +I  Y   G++  AL    +M E+G+LPD
Sbjct: 545 YTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554

[Close]

BLAST of Spo12892.1 vs. ExPASy Swiss-Prot
Match: PP437_ARATH (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.300e-56
Identity = 134/496 (27.02%), Postives = 242/496 (48.79%), Query Frame = 1


		  
Query: 183 GVELDPASFSCAIGLVSQKPDSNAACNLLLEMKEKGWVPSEGSYTQAIIACVKQRNLMEA 242
           G+  D   ++  I  + +  D + A  ++  M+  G   +   Y   I    K++ + EA
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281

Query: 243 LRLKDEMVSCGKPMNLVVATMLMKGYCVSGDLESALGLFEKLAELELSPNKSTFSVLIDG 302
           + +K ++       ++V    L+ G C   + E  L + +++  L  SP+++  S L++G
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG 341

Query: 303 CCINGNMEKASELYDQMTEKGIKPSGFNVNSLIKGFLKARLFEKAYEMFNKAAESGL-VD 362
               G +E+A  L  ++ + G+ P+ F  N+LI    K R F +A  +F++  + GL  +
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN 401

Query: 363 DSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEPNLQNYNNLILGYCRKGNVAMAHGMYV 422
           D + + L+   C+ G +D A  F G  +  G++ ++  YN+LI G+C+ G+++ A G   
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMA 461

Query: 423 QMIAKGLNPNVVTFTILMNGHIKKGEVGKALKMFDEMLQKGIKCTDHAYNTIIGGLCKNG 482
           +MI K L P VVT+T LM G+  KG++ KAL+++ EM  KGI  + + + T++ GL + G
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG 521

Query: 483 QRIDCTD--------------DTYNSIIVGLCKNGQTSRARKILEDFIKIDKFVPSCLTY 542
              D                  TYN +I G C+ G  S+A + L++  +    VP   +Y
Sbjct: 522 LIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE-KGIVPDTYSY 581

Query: 543 NSIVGGLINEGDLDSALSVYNEMGEKGVSPDLCTYTIFIDAFLKSNNFNLVLKMQNEMIS 602
             ++ GL   G    A    + + +     +   YT  +  F +       L +  EM+ 
Sbjct: 582 RPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQ 641

Query: 603 KGLELDITAYGTLIDGCCQREDMKNACKLFNQLCEAGLSPNYDIYYNMIMGYRTLGNIRA 662
           +G++LD+  YG LIDG  + +D K    L  ++ + GL P+  IY +MI      G+ + 
Sbjct: 642 RGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE 701

Query: 663 ALSFEKKMNEQGILPD 664
           A      M  +G +P+
Sbjct: 702 AFGIWDLMINEGCVPN 716

[Close]

BLAST of Spo12892.1 vs. ExPASy Swiss-Prot
Match: RF1_ORYSI (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 7.600e-54
Identity = 137/500 (27.40%), Postives = 244/500 (48.80%), Query Frame = 1


		  
Query: 182 KGVELDPASFSCAI-GLVSQKPDSNAACNLLLEMKEKGWVPSEGSYTQAIIACVKQRNLM 241
           KG  +D  +F+  + GL + K  S+A   +L  M E G +P+  SY   +     +    
Sbjct: 116 KGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQ 175

Query: 242 EALRLKDEMVSC---GKPMNLVVATMLMKGYCVSGDLESALGLFEKLAELELSPNKSTFS 301
           EAL L   M      G P ++V  T ++ G+   GD + A   + ++ +  + P+  T++
Sbjct: 176 EALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYN 235

Query: 302 VLIDGCCINGNMEKASELYDQMTEKGIKPSGFNVNSLIKGFLKARLFEKAYEMFNKAAES 361
            +I   C    M+KA E+ + M + G+ P     NS++ G+  +   ++A     K    
Sbjct: 236 SIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSD 295

Query: 362 GLVDDSSLNSLL-SCLCKDGNMDEAQKFWGMALQCGIEPNLQNYNNLILGYCRKGNVAMA 421
           G+  D    SLL   LCK+G   EA+K +    + G++P +  Y  L+ GY  KG +   
Sbjct: 296 GVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 355

Query: 422 HGMYVQMIAKGLNPNVVTFTILMNGHIKKGEVGKALKMFDEMLQKGIKCTDHAYNTIIGG 481
           HG+   M+  G++P+   F+IL+  + K+G+V +A+ +F +M Q+G+      Y  +IG 
Sbjct: 356 HGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGI 415

Query: 482 LCKNGQRIDCT--------------DDTYNSIIVGLCKNGQTSRARKILEDFIKIDKFVP 541
           LCK+G+  D                +  YNS+I GLC   +  RA +++ +   +D+ + 
Sbjct: 416 LCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM--LDRGI- 475

Query: 542 SCLT---YNSIVGGLINEGDLDSALSVYNEMGEKGVSPDLCTYTIFIDAFLKSNNFNLVL 601
            CL    +NSI+     EG +  +  ++  M   GV P++ TY   I+ +  +   +  +
Sbjct: 476 -CLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 535

Query: 602 KMQNEMISKGLELDITAYGTLIDGCCQREDMKNACKLFNQLCEAGLSPNYDIYYNMIMGY 660
           K+ + M+S GL+ +   Y TLI+G C+   M++A  LF ++  +G+SP+   Y  ++ G 
Sbjct: 536 KLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 595

[Close]

BLAST of Spo12892.1 vs. TAIR (Arabidopsis)
Match: AT3G54980.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 374.0 bits (959), Expect = 1.900e-103
Identity = 202/486 (41.56%), Postives = 305/486 (62.76%), Query Frame = 1


		  
Query: 179 ARDKGVELDPASFSCAIGLVSQKPDSNAACNLLLEMKEKGW-VPSEGSYTQAIIACVKQR 238
           A ++G E D   +S A+    +  D   A +LL EMKEK   VPS+ +YT  I+A VKQ 
Sbjct: 259 AIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQG 318

Query: 239 NLMEALRLKDEMVSCGKPMNLVVATMLMKGYCVSGDLESALGLFEKLAELELSPNKSTFS 298
           N+ +A+RLKDEM+S G  MN+V AT L+ G+C + DL SAL LF+K+ +   SPN  TFS
Sbjct: 319 NMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFS 378

Query: 299 VLIDGCCINGNMEKASELYDQMTEKGIKPSGFNVNSLIKGFLKARLFEKAYEMFNKAAES 358
           VLI+    NG MEKA E Y +M   G+ PS F+V+++I+G+LK +  E+A ++F+++ E+
Sbjct: 379 VLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFET 438

Query: 359 GLVDDSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEPNLQNYNNLILGYCRKGNVAMAH 418
           GL +    N++LS LCK G  DEA +        GI PN+ +YNN++LG+CR+ N+ +A 
Sbjct: 439 GLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLAR 498

Query: 419 GMYVQMIAKGLNPNVVTFTILMNGHIKKGEVGKALKMFDEMLQKGIKCTDHAYNTIIGGL 478
            ++  ++ KGL PN  T++IL++G  +  +   AL++ + M    I+     Y TII   
Sbjct: 499 IVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIIN-- 558

Query: 479 CKNGQRIDCTDDTYNSIIVGLCKNGQTSRARKILEDFIKIDKFVPSCLTYNSIVGGLINE 538
                              GLCK GQTS+AR++L + I+  +   SC++YNSI+ G   E
Sbjct: 559 -------------------GLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKE 618

Query: 539 GDLDSALSVYNEMGEKGVSPDLCTYTIFIDAFLKSNNFNLVLKMQNEMISKGLELDITAY 598
           G++DSA++ Y EM   G+SP++ TYT  ++   K+N  +  L+M++EM +KG++LDI AY
Sbjct: 619 GEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAY 678

Query: 599 GTLIDGCCQREDMKNACKLFNQLCEAGLSPNYDIYYNMIMGYRTLGNIRAALSFEKKMNE 658
           G LIDG C+R +M++A  LF++L E GL+P+  IY ++I G+R LGN+ AAL   KKM +
Sbjct: 679 GALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLK 723

Query: 659 QGILPD 664
            G+  D
Sbjct: 739 DGLRCD 723

[Close]

BLAST of Spo12892.1 vs. TAIR (Arabidopsis)
Match: AT2G39230.1 (LATERAL ORGAN JUNCTION)

HSP 1 Score: 368.6 bits (945), Expect = 8.000e-102
Identity = 199/491 (40.53%), Postives = 287/491 (58.45%), Query Frame = 1


		  
Query: 174 RYFKLARDKGVELDPASFSCAIGLVSQKPDSNAACNLLLEMKEKGWVP-SEGSYTQAIIA 233
           + F+    +G E D   FS A+    + PD   A +LL EM+ K  VP S+ +YT  I+A
Sbjct: 260 KIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVA 319

Query: 234 CVKQRNLMEALRLKDEMVSCGKPMNLVVATMLMKGYCVSGDLESALGLFEKLAELELSPN 293
            VK+ N+ EA+R+ DEMV  G PM+++ AT L+ GYC   +L  AL LF ++ E  L+P+
Sbjct: 320 FVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPD 379

Query: 294 KSTFSVLIDGCCINGNMEKASELYDQMTEKGIKPSGFNVNSLIKGFLKARLFEKAYEMFN 353
           K  FSV+++  C N  MEKA E Y +M    I PS   V+++I+G LKA   E A E+FN
Sbjct: 380 KVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFN 439

Query: 354 KAAESGLVDDSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEPNLQNYNNLILGYCRKGN 413
            + ES +      N +    CK G +D A  F  M  Q GIEPN+  YNN++L +CR  N
Sbjct: 440 DSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKN 499

Query: 414 VAMAHGMYVQMIAKGLNPNVVTFTILMNGHIKKGEVGKALKMFDEMLQKGIKCTDHAYNT 473
           + +A  ++ +M+ KGL PN  T++IL++G  K  +   A  + ++M              
Sbjct: 500 MDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQM-------------- 559

Query: 474 IIGGLCKNGQRIDCTDDTYNSIIVGLCKNGQTSRARKILEDFIKIDKFVPSCLTYNSIVG 533
                  N    +  +  YN+II GLCK GQTS+A+++L++ IK  ++  SC +YNSI+ 
Sbjct: 560 -------NASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIID 619

Query: 534 GLINEGDLDSALSVYNEMGEKGVSPDLCTYTIFIDAFLKSNNFNLVLKMQNEMISKGLEL 593
           G +  GD DSA+  Y EM E G SP++ T+T  I+ F KSN  +L L+M +EM S  L+L
Sbjct: 620 GFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKL 679

Query: 594 DITAYGTLIDGCCQREDMKNACKLFNQLCEAGLSPNYDIYYNMIMGYRTLGNIRAALSFE 653
           D+ AYG LIDG C++ DMK A  LF++L E GL PN  +Y ++I G+R LG + AA+   
Sbjct: 680 DLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLY 729

Query: 654 KKMNEQGILPD 664
           KKM   GI  D
Sbjct: 740 KKMVNDGISCD 729

[Close]

BLAST of Spo12892.1 vs. TAIR (Arabidopsis)
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 230.7 bits (587), Expect = 2.600e-60
Identity = 121/392 (30.87%), Postives = 214/392 (54.59%), Query Frame = 1


		  
Query: 273 DLESALGLFEKLAELELSPNKSTFSVLIDGCCINGNMEKASELYDQMTEKGIKPSGFNVN 332
           ++  A  +F+++ E ++SPN  T+++LI G C  GN++ A  L+D+M  KG  P+    N
Sbjct: 185 NISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYN 244

Query: 333 SLIKGFLKARLFEKAYEMFNKAAESGLVDDS-SLNSLLSCLCKDGNMDEAQKFWGMALQC 392
           +LI G+ K R  +  +++    A  GL  +  S N +++ LC++G M E         + 
Sbjct: 245 TLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 304

Query: 393 GIEPNLQNYNNLILGYCRKGNVAMAHGMYVQMIAKGLNPNVVTFTILMNGHIKKGEVGKA 452
           G   +   YN LI GYC++GN   A  M+ +M+  GL P+V+T+T L++   K G + +A
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364

Query: 453 LKMFDEMLQKGIKCTDHAYNTIIGGLCKNGQRIDCTDDTYNSIIVGLCKNGQTSRARKIL 512
           ++  D+M               + GLC N       + TY +++ G  + G  + A ++L
Sbjct: 365 MEFLDQMR--------------VRGLCPN-------ERTYTTLVDGFSQKGYMNEAYRVL 424

Query: 513 EDFIKIDKFVPSCLTYNSIVGGLINEGDLDSALSVYNEMGEKGVSPDLCTYTIFIDAFLK 572
            + +  + F PS +TYN+++ G    G ++ A++V  +M EKG+SPD+ +Y+  +  F +
Sbjct: 425 RE-MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 484

Query: 573 SNNFNLVLKMQNEMISKGLELDITAYGTLIDGCCQREDMKNACKLFNQLCEAGLSPNYDI 632
           S + +  L+++ EM+ KG++ D   Y +LI G C++   K AC L+ ++   GL P+   
Sbjct: 485 SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT 544

Query: 633 YYNMIMGYRTLGNIRAALSFEKKMNEQGILPD 664
           Y  +I  Y   G++  AL    +M E+G+LPD
Sbjct: 545 YTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554

[Close]

BLAST of Spo12892.1 vs. TAIR (Arabidopsis)
Match: AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 222.6 bits (566), Expect = 7.100e-58
Identity = 134/496 (27.02%), Postives = 242/496 (48.79%), Query Frame = 1


		  
Query: 183 GVELDPASFSCAIGLVSQKPDSNAACNLLLEMKEKGWVPSEGSYTQAIIACVKQRNLMEA 242
           G+  D   ++  I  + +  D + A  ++  M+  G   +   Y   I    K++ + EA
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281

Query: 243 LRLKDEMVSCGKPMNLVVATMLMKGYCVSGDLESALGLFEKLAELELSPNKSTFSVLIDG 302
           + +K ++       ++V    L+ G C   + E  L + +++  L  SP+++  S L++G
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG 341

Query: 303 CCINGNMEKASELYDQMTEKGIKPSGFNVNSLIKGFLKARLFEKAYEMFNKAAESGL-VD 362
               G +E+A  L  ++ + G+ P+ F  N+LI    K R F +A  +F++  + GL  +
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN 401

Query: 363 DSSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEPNLQNYNNLILGYCRKGNVAMAHGMYV 422
           D + + L+   C+ G +D A  F G  +  G++ ++  YN+LI G+C+ G+++ A G   
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMA 461

Query: 423 QMIAKGLNPNVVTFTILMNGHIKKGEVGKALKMFDEMLQKGIKCTDHAYNTIIGGLCKNG 482
           +MI K L P VVT+T LM G+  KG++ KAL+++ EM  KGI  + + + T++ GL + G
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG 521

Query: 483 QRIDCTD--------------DTYNSIIVGLCKNGQTSRARKILEDFIKIDKFVPSCLTY 542
              D                  TYN +I G C+ G  S+A + L++  +    VP   +Y
Sbjct: 522 LIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE-KGIVPDTYSY 581

Query: 543 NSIVGGLINEGDLDSALSVYNEMGEKGVSPDLCTYTIFIDAFLKSNNFNLVLKMQNEMIS 602
             ++ GL   G    A    + + +     +   YT  +  F +       L +  EM+ 
Sbjct: 582 RPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQ 641

Query: 603 KGLELDITAYGTLIDGCCQREDMKNACKLFNQLCEAGLSPNYDIYYNMIMGYRTLGNIRA 662
           +G++LD+  YG LIDG  + +D K    L  ++ + GL P+  IY +MI      G+ + 
Sbjct: 642 RGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE 701

Query: 663 ALSFEKKMNEQGILPD 664
           A      M  +G +P+
Sbjct: 702 AFGIWDLMINEGCVPN 716

[Close]

BLAST of Spo12892.1 vs. TAIR (Arabidopsis)
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 209.9 bits (533), Expect = 4.800e-54
Identity = 126/452 (27.88%), Postives = 223/452 (49.34%), Query Frame = 1


		  
Query: 182 KGVELDPASFSCAIGLVSQKPDSNAACNLLLEMKEKGWVPSEGSYTQAIIACVKQRNLME 241
           KG   D  S+S  +    +  + +    L+  MK KG  P+   Y   I    +   L E
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334

Query: 242 ALRLKDEMVSCGKPMNLVVATMLMKGYCVSGDLESALGLFEKLAELELSPNKSTFSVLID 301
           A     EM+  G   + VV T L+ G+C  GD+ +A   F ++   +++P+  T++ +I 
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394

Query: 302 GCCINGNMEKASELYDQMTEKGIKPSGFNVNSLIKGFLKARLFEKAYEMFNKAAESGLVD 361
           G C  G+M +A +L+ +M  KG++P       LI G+ KA   + A+ + N   ++G   
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454

Query: 362 D-SSLNSLLSCLCKDGNMDEAQKFWGMALQCGIEPNLQNYNNLILGYCRKGNVAMAHGMY 421
           +  +  +L+  LCK+G++D A +      + G++PN+  YN+++ G C+ GN+  A  + 
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514

Query: 422 VQMIAKGLNPNVVTFTILMNGHIKKGEVGKALKMFDEMLQKGIKCTDHAYNTIIGGLCKN 481
            +  A GLN + VT+T LM+ + K GE+ KA ++  EML KG++ T   +N ++ G C +
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574

Query: 482 GQRIDCTDDTYNSIIVGLCKNGQTSRARKILEDFIKIDKFVPSCLTYNSIVGGLINEGDL 541
           G   D                       K+L +++      P+  T+NS+V       +L
Sbjct: 575 GMLED---------------------GEKLL-NWMLAKGIAPNATTFNSLVKQYCIRNNL 634

Query: 542 DSALSVYNEMGEKGVSPDLCTYTIFIDAFLKSNNFNLVLKMQNEMISKGLELDITAYGTL 601
            +A ++Y +M  +GV PD  TY   +    K+ N      +  EM  KG  + ++ Y  L
Sbjct: 635 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 694

Query: 602 IDGCCQREDMKNACKLFNQLCEAGLSPNYDIY 633
           I G  +R+    A ++F+Q+   GL+ + +I+
Sbjct: 695 IKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704

The following BLAST results are available for this feature:

BLAST of Spo12892.1 vs. NCBI nr
BLAST of Spo12892.1 vs. UniProtKB/TrEMBL
BLAST of Spo12892.1 vs. ExPASy Swiss-Prot
BLAST of Spo12892.1 vs. TAIR (Arabidopsis)

BLAST of Spo12892.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902161143\|gb\|KNA06530.1\|	0.0e+0	100.	hypothetical protein SOVF_1802...	[more]
gi\|902148800\|gb\|KNA05276.1\|	2.7e-277	68.2	hypothetical protein SOVF_1919...	[more]
gi\|731322426\|ref\|XP_010671882.1\|	1.9e-206	53.4	PREDICTED: pentatricopeptide r...	[more]
gi\|296081998\|emb\|CBI21003.3\|	6.3e-141	48.0	unnamed protein product [Vitis...	[more]
gi\|359476104\|ref\|XP_003631789.1\|	6.3e-141	48.0	PREDICTED: pentatricopeptide r...	[more]

BLAST of Spo12892.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QH28_SPIOL	0.0e+0	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9QFE8_SPIOL	1.9e-277	68.2	Uncharacterized protein OS=Spi...	[more]
A0A0J8FKF7_BETVU	1.3e-206	53.4	Uncharacterized protein OS=Bet...	[more]
D7SUQ4_VITVI	4.4e-141	48.0	Putative uncharacterized prote...	[more]
W9R5M4_9ROSA	8.0e-135	40.5	Uncharacterized protein OS=Mor...	[more]

BLAST of Spo12892.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
PP282_ARATH	3.4e-102	41.5	Pentatricopeptide repeat-conta...	[more]
PP194_ARATH	1.4e-100	40.5	Pentatricopeptide repeat-conta...	[more]
PP407_ARATH	4.6e-59	30.8	Pentatricopeptide repeat-conta...	[more]
PP437_ARATH	1.3e-56	27.0	Putative pentatricopeptide rep...	[more]
RF1_ORYSI	7.6e-54	27.4	Protein Rf1, mitochondrial OS=...	[more]

BLAST of Spo12892.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT3G54980.1	1.9e-103	41.5	Pentatricopeptide repeat (PPR)...	[more]
AT2G39230.1	8.0e-102	40.5	LATERAL ORGAN JUNCTION	[more]
AT5G39710.1	2.6e-60	30.8	Tetratricopeptide repeat (TPR)...	[more]
AT5G59900.1	7.1e-58	27.0	Pentatricopeptide repeat (PPR)...	[more]
AT1G05670.1	4.8e-54	27.8	Pentatricopeptide repeat (PPR-...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 364..393 score: 3.1E-4coord: 332..358 score: 0.0011coord: 225..253 score: 0.037coord: 400..428 score: 1.6E-4coord: 490..515 score: 3.
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 430..479 score: 4.0E-16coord: 257..304 score: 2.7E-11coord: 522..570 score: 2.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 583..638 score: 4.
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 332..359 score: 4.1E-4coord: 596..628 score: 9.9E-7coord: 295..327 score: 1.0E-9coord: 490..523 score: 5.1E-5coord: 526..558 score: 4.0E-8coord: 262..292 score: 6.2E-4coord: 225..255 score: 0.002coord: 364..396 score: 3.0E-5coord: 560..593 score: 8.9E-6coord: 433..466 score: 6.8E-9coord: 400..432 score: 6.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 431..465 score: 11.86coord: 257..291 score: 9.964coord: 187..221 score: 7.892coord: 523..557 score: 12.003coord: 361..395 score: 11.137coord: 593..627 score: 11.257coord: 327..357 score: 7.311coord: 487..522 score: 9.219coord: 222..256 score: 7.805coord: 292..326 score: 13.351coord: 396..430 score: 11.148coord: 628..662 score: 8.254coord: 558..592 score: 9
IPR011990	Tetratricopeptide-like helical domain	GENE3D	1.25.40.10		coord: 231..467 score: 1.7E-12coord: 489..540 score: 2.4E-4coord: 596..650 score: 2.
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 187..663 score: 1.8E
None	No IPR available	PROFILE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..33 score:
None	No IPR available	unknown	SSF81901	HCP-like	coord: 260..471 score: 7.85E-17coord: 498..659 score: 4.4

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0016049	cell growth
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0061025	membrane fusion
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0032482	Rab protein signal transduction
cellular_component	GO:0005773	vacuole
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0019003	GDP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0005525	GTP binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo24736	0.70	Barchart \| Table
Spo03630	0.69	Barchart \| Table
Spo06923	0.67	Barchart \| Table
Spo04104	0.65	Barchart \| Table
Spo23401	0.65	Barchart \| Table