Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTAGATGACATTGTCTAATTCTTTCGTAATTATTTTTGCCAAAACTAACCTTAGTATCCGACGGCTATTATTCAAGTCGCTAGTGATAAATCAAAAGTCCCAATATCCTCCCATAGAAAGAAAGATAAATACCAAACTTTAGCTCCCAAAATACTCCAACGACTTTAAGCTTTTGTTTCAGTTTGGAATACAACGAACTTTGGAGTCACAGAAAAAGAGAGAGAGTTAGAACTAGAGAAAGAAACAGAAACAGAGGATGGCCGGGTTGGTAAAGGCAGCTCCGTTGACTTATGTGGTACACGTGCTAGCGGTGGCGTGTGCAGTGATGGTGTTGGTTTGGTGCATCCACTTCAGAGGCGGATTGGCTTGGGAAGCTACCAATAAAAGTCTCATCTTCAACGTATGCTCTTTTACTACTTTCTGATTTAATTTGATCATCCCTCTTCTTTCTAGTAATAGTTAGTTTTTCTGCTAAATTTTGTGGTGGGCTTGATCCTGATTCCAGATTTGTTGGGAACAATGGAAAATATGTCACACAAAATAAAGTTAAAGTCTCTTGGGTGATTTCAAATGGCAAATGATGATGGAACCAGTCATAAAGTTTGGTTTTAGACTTTTAGCTGGTTACTTCTTTTCTAGAGAAAGTATTGCCCACGTATAGGATTGGGATAGGTCACTTTTCTACAATTTTGGGGTGAGAGGTCTTTTTAATATATTAAATTAAGTATACTTGGAATAAAAATTATGCCACCAAATGATTTTTCGAATTAGAGGGGAAATCATGGTAGGCAGAGTAATTGGGTATGTTAGGTAACATCATCCTATGATTCCTATCATTTGCTTGTTTCTCTCAGAAGATAATACATTTGGTTGGTTTAGGTGTGTATGTGACAATAAACTTTGCACATGATTTTGACTTCCCCTCTTTCACACCATTAATATTTAATTACTCCATAACATGTGAACAGTTGGGCACCTATTAGCTTTAGTAATTTATGAATTTTGAAGTTTTAGGAAAGTTCTAGTGTGTCCATATGATATAAGTCTTTAATAATGGAAAGAGTATACTGAAAGTATGTTGGTTGTTTGTCTTTGAAGGAACCCAAACCTTTGAAGCTCCATACCTTGGATAAGGCAATTTCTATACTAGTTAAACCAAAAATGTTGTAAAGCCAACGCTAGTTTTTTAGCTCGTTTGCTCATTTTGGAAAAGCGTCAAATGATAAAAAGAATGAGGGGATGTTATATACTATGTAACTTGGACTCGGGTCCGACTCGGCATTGTGAAAGAAATACAGGATTTAAGTCGAAAATGAAGTGTCGGAGTGTCCGTACCCATGTCAGAGTGTCGAGGGTCCAACACAGGTACTTGAGGTAAAATGAAGAGTCGGAATAACATAGGTTATATACCATGAACACTCTTGATGGATAACGTTACTAGTACGAGAAACCCCTAGTTCAAAACTGTGACAATAGAGTCTCAAGTCACTCAAAATGCTCCCTATCAAGCCTCAAGATTCCTAAATTGTCATAATAAGTTTCTGAAATTCCCAAACCTCTACATGTTAGGAAAATATTGGAAGTTTCTTTGCTACAGAATATCAGCCTCTTACTTGCATAGATTGTTCAGTTTAATAAAAAGATGAGGTATCTTGTCCCTTTGTGGAAATAATTTAGGATACTTATCTTGCATTTAGACTGTGATTGGCTGCTTTGATTTCTTATGTACTACTCAATCTTTCAAAAAAAATTCAGAATAATGGGATAAATTTGGTAAGCTGGACGTGGACCTCCTTTTTGTGTCTGATTCATGTGGAATGTGAGAAACGTGGTGCTTGTCAAACAGTGAAAATAATTGTTTAAAAACTAATCCTGCTCTTCTGATATGTGTTTTGTTCAATTTGGCAACTAGTGGGTGACTCTTAAGCACCTCCTAACAATGTTTCCTAACCTACCGGGTCGTTTATATAATAAAATTAATTAAAGATGGCCGTGAGATGGGTTGGGCTTCGGGCCGAGCCACATGTCATGGCCCTAACCGGTTCGGGCCCACACCAGTCCCATATTGTTTTGTGTCGAACCGGGCCTAAAAGTTCAAAACATGGGCCTAGGTCCGGCCCAAGACCACGGACTTTCGTGCCAGGCAGGGCCGACCGTCGTGCCTAAGGCTAATTTTACTAAATTTAGTGTGCTTTGCCGTGCTTTTTCCAAAAAATTAAGGCCCATGGCCCACGACTTCGTGCCTGTGTCGGGCCGGGCTTTTTCGTGTCGAATCGGGTCGGGCTTCGGGACGGCCCGGCCCACGTCCATCTTTAACCTCCCCTGTTTGTATTGCCCCACTTAATCCCTTATAGTCTATGTTCATTGAGTAATGTTGTTACTCTGATGGTAATCACTCACCATCAGCTTATACTTTCTTTTGACAGATTCACCCTGTTTTGATGTTGATTGGTTTCATAATACTTGGAGGTGAAGGTAATCAATCAGGCTAAATCTAAACTCTACATTATAAAAATTGGGATCATGTTTAATTCAGCTGAAAATCAAGTCTGTCTTTGTAACATATACTAATTAGAATTCAATTGCAGCAATTGTAAGCTACAAATCTCTGCCCTTGAAGAAAGAAGTGCAGAAAGTGATTCATCTAGTGCTGCATGCTGTTGCACTAATTCTTGGTATTATTGGTATTTGGGCTGCATTCAAGTTCCACAATGAGAGTTCAATCCCAAACTTGTACAGCTTACACTCATGGCTTGGTATTGGCATCATTGTCCTCTACACCCTTCAGGTAAACTTTCATAATACTCTGACAATTTGCTTGCTTGTGATATGAAAACTATACATAAGGTGATCAAAGTCATGAAACACTGCTTAAGATTTATGATTCAGGAAATACTTTACCCTCATAACTCACAAGTCAAATCAAACAAAAGTGGTAGACTAATGAGCTTATCATGGATCGAAAATGTGAAACCAATAGTACTATTTGGATGATTTTGATCTGAAACATAGTGTTTGAGAGGGATTTTTGGATCAAATATAATTAAATGTGTTATTGAGAATTGGCAACACATAAGCAACTGGCACAAAATCATAATGGTGACTACTAAAGTACTAATCTGTCACTGCTCTAACATGCCTTTTGGGCCTTAAGGCTAGAGGTGTCATGGAATCCCGTACATTTTCTACGAACCAGAACAAACCACATTTCAAGCAACTTTGCTGATGCTACAAATACTTCATTAGGTAAAGAAGTTTTCCCTTTACATAGTGTGCTGTTCTGTTGGTAAGTGATTGTCACATGGTTTCATCCCAGCAAAAGAAAGATGATGGCAATATAGGTGAAAACTGATGTATGATTAAGCTTAGTATTGAATACTAATACTTCATTAGGTAAACCAGTTTTCCCTTTACGTAGTGTGTTGTTCTGTTGGTAAGTGATAGTCACATGGTTTCAGCCCAGCAAAAGAGAGCTGATGGCAATATAGGTGAAAACTGATGTAGATTAAGCTTAGTGCGGAGTAATTAGTATATTTATCACATTGAATTAAGAAGATTATCTCTCTTACAACATTGAATTAAGCTTAGTGCGGAGCCAAAGATTCATTTGTTCTTTTTGGCAGTGGGATATAATGGACTAAATCAAAATAGTTCTTAAAACCTCTTCGCCTATTTTCCATGAAGTAGAAGACGGTCGTCCTGTGGTAGTCCCGTTATCGCTTTTGGGTCAATTGGAAACAACCTCTGCAATTGCAGGGGTAAGATTGCGTACGTCGGACCCCCCTTACCCCGCTTCTTGCGGGAGCCTCTTTAAGGCAACGGGGTAATGATAATGAATCTCTCTTACAATTACCCAACACAAAAGTGTTGCACAATCTCTCCAAGTCCGTTTTGTATTCTTGTCGACTTAACTAAATTGTGTTTAATTCCTAACAGTATCTTCATACTTAAGCCCCATGAGTTGTCCTTTTCATCTCAGCTTCTAATTCTTCCCGAAACTATTGGTACAAATTTTGCAGTGGATATACGGATTCGTAATATTCTTCTACCCAGGAGGGAACTCTTCCTTAAGAAGTGAATCACTTCCATTGCATGTTCTCGTAGGGATATTTGTGTATGCATTAGCTATTGCAAATGCAGCAATAGGATTCCTAGAGAAGCTTACCTTTCTCGAAAGTTCAGGCCTCGACAAAGTCGGTCCAGAGGCTTATCTCGTAAACTTCACTGCCATTGCTACTATACTTTTTGGTGGGTTTGTTTTGCTCACGGTGTATGCTCAGAAGGATGAGCAGACGGAGGAGGAGGATTATAGAAGCTATTCAGCTATTTGAAAGACTATAAATGAAGAATACCATACCACTTTGAATCCTTGTTACTCTATACTTTGAAGGTGATTTTATGGTGTCAATGTATAGTTAATTAGTCATGAATTGTTTTACTTTATTCTTTTAAAAAACTTGTTAGAAAATTATGTCTTGTATGTCATGTATCTAAGTCACAGTCTTGGTGGTGGTTTTTATGATCTGAAAATGTTTGTACTGTACCTTTGTTGCAAAGACAGGGGACACACTTATCTTAAACTCCCTCCATTCTGAAATTATTTGCTATATTATAATTTACTAAACAAATGTTGGTATTGTACACCCA GTAGATGACATTGTCTAATTCTTTCGTAATTATTTTTGCCAAAACTAACCTTAGTATCCGACGGCTATTATTCAAGTCGCTAGTGATAAATCAAAAGTCCCAATATCCTCCCATAGAAAGAAAGATAAATACCAAACTTTAGCTCCCAAAATACTCCAACGACTTTAAGCTTTTGTTTCAGTTTGGAATACAACGAACTTTGGAGTCACAGAAAAAGAGAGAGAGTTAGAACTAGAGAAAGAAACAGAAACAGAGGATGGCCGGGTTGGTAAAGGCAGCTCCGTTGACTTATGTGGTACACGTGCTAGCGGTGGCGTGTGCAGTGATGGTGTTGGTTTGGTGCATCCACTTCAGAGGCGGATTGGCTTGGGAAGCTACCAATAAAAGTCTCATCTTCAACATTCACCCTGTTTTGATGTTGATTGGTTTCATAATACTTGGAGGTGAAGCAATTGTAAGCTACAAATCTCTGCCCTTGAAGAAAGAAGTGCAGAAAGTGATTCATCTAGTGCTGCATGCTGTTGCACTAATTCTTGGTATTATTGGTATTTGGGCTGCATTCAAGTTCCACAATGAGAGTTCAATCCCAAACTTGTACAGCTTACACTCATGGCTTGGTATTGGCATCATTGTCCTCTACACCCTTCAGTGGATATACGGATTCGTAATATTCTTCTACCCAGGAGGGAACTCTTCCTTAAGAAGTGAATCACTTCCATTGCATGTTCTCGTAGGGATATTTGTGTATGCATTAGCTATTGCAAATGCAGCAATAGGATTCCTAGAGAAGCTTACCTTTCTCGAAAGTTCAGGCCTCGACAAAGTCGGTCCAGAGGCTTATCTCGTAAACTTCACTGCCATTGCTACTATACTTTTTGGTGGGTTTGTTTTGCTCACGGTGTATGCTCAGAAGGATGAGCAGACGGAGGAGGAGGATTATAGAAGCTATTCAGCTATTTGAAAGACTATAAATGAAGAATACCATACCACTTTGAATCCTTGTTACTCTATACTTTGAAGGTGATTTTATGGTGTCAATGTATAGTTAATTAGTCATGAATTGTTTTACTTTATTCTTTTAAAAAACTTGTTAGAAAATTATGTCTTGTATGTCATGTATCTAAGTCACAGTCTTGGTGGTGGTTTTTATGATCTGAAAATGTTTGTACTGTACCTTTGTTGCAAAGACAGGGGACACACTTATCTTAAACTCCCTCCATTCTGAAATTATTTGCTATATTATAATTTACTAAACAAATGTTGGTATTGTACACCCA ATGGCCGGGTTGGTAAAGGCAGCTCCGTTGACTTATGTGGTACACGTGCTAGCGGTGGCGTGTGCAGTGATGGTGTTGGTTTGGTGCATCCACTTCAGAGGCGGATTGGCTTGGGAAGCTACCAATAAAAGTCTCATCTTCAACATTCACCCTGTTTTGATGTTGATTGGTTTCATAATACTTGGAGGTGAAGCAATTGTAAGCTACAAATCTCTGCCCTTGAAGAAAGAAGTGCAGAAAGTGATTCATCTAGTGCTGCATGCTGTTGCACTAATTCTTGGTATTATTGGTATTTGGGCTGCATTCAAGTTCCACAATGAGAGTTCAATCCCAAACTTGTACAGCTTACACTCATGGCTTGGTATTGGCATCATTGTCCTCTACACCCTTCAGTGGATATACGGATTCGTAATATTCTTCTACCCAGGAGGGAACTCTTCCTTAAGAAGTGAATCACTTCCATTGCATGTTCTCGTAGGGATATTTGTGTATGCATTAGCTATTGCAAATGCAGCAATAGGATTCCTAGAGAAGCTTACCTTTCTCGAAAGTTCAGGCCTCGACAAAGTCGGTCCAGAGGCTTATCTCGTAAACTTCACTGCCATTGCTACTATACTTTTTGGTGGGTTTGTTTTGCTCACGGTGTATGCTCAGAAGGATGAGCAGACGGAGGAGGAGGATTATAGAAGCTATTCAGCTATTTGA MAGLVKAAPLTYVVHVLAVACAVMVLVWCIHFRGGLAWEATNKSLIFNIHPVLMLIGFIILGGEAIVSYKSLPLKKEVQKVIHLVLHAVALILGIIGIWAAFKFHNESSIPNLYSLHSWLGIGIIVLYTLQWIYGFVIFFYPGGNSSLRSESLPLHVLVGIFVYALAIANAAIGFLEKLTFLESSGLDKVGPEAYLVNFTAIATILFGGFVLLTVYAQKDEQTEEEDYRSYSAI Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo12884.1 vs. NCBI nr
Match: gi|902235457|gb|KNA23927.1| (hypothetical protein SOVF_019690 isoform A [Spinacia oleracea]) HSP 1 Score: 456.1 bits (1172), Expect = 3.800e-125 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 1
BLAST of Spo12884.1 vs. NCBI nr
Match: gi|731376424|ref|XP_010667562.1| (PREDICTED: transmembrane ascorbate ferrireductase 1-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 397.5 bits (1020), Expect = 1.600e-107 Identity = 201/234 (85.90%), Postives = 218/234 (93.16%), Query Frame = 1
BLAST of Spo12884.1 vs. NCBI nr
Match: gi|870841641|gb|KMS95284.1| (hypothetical protein BVRB_009620 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 350.9 bits (899), Expect = 1.700e-93 Identity = 170/222 (76.58%), Postives = 197/222 (88.74%), Query Frame = 1
BLAST of Spo12884.1 vs. NCBI nr
Match: gi|731376409|ref|XP_010667557.1| (PREDICTED: transmembrane ascorbate ferrireductase 1-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 350.9 bits (899), Expect = 1.700e-93 Identity = 170/222 (76.58%), Postives = 197/222 (88.74%), Query Frame = 1
BLAST of Spo12884.1 vs. NCBI nr
Match: gi|823149410|ref|XP_012474570.1| (PREDICTED: transmembrane ascorbate ferrireductase 1-like [Gossypium raimondii]) HSP 1 Score: 348.6 bits (893), Expect = 8.500e-93 Identity = 180/234 (76.92%), Postives = 205/234 (87.61%), Query Frame = 1
BLAST of Spo12884.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RYJ8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_019690 PE=4 SV=1) HSP 1 Score: 456.1 bits (1172), Expect = 2.600e-125 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 1
BLAST of Spo12884.1 vs. UniProtKB/TrEMBL
Match: A0A0J8DWP7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_009630 PE=4 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 1.100e-107 Identity = 201/234 (85.90%), Postives = 218/234 (93.16%), Query Frame = 1
BLAST of Spo12884.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B2E1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_009620 PE=4 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 1.200e-93 Identity = 170/222 (76.58%), Postives = 197/222 (88.74%), Query Frame = 1
BLAST of Spo12884.1 vs. UniProtKB/TrEMBL
Match: A0A0D2QW77_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G118600 PE=4 SV=1) HSP 1 Score: 348.6 bits (893), Expect = 5.900e-93 Identity = 180/234 (76.92%), Postives = 205/234 (87.61%), Query Frame = 1
BLAST of Spo12884.1 vs. UniProtKB/TrEMBL
Match: A0A061G1Y8_THECC (Cytochrome b561/ferric reductase transmembrane protein family isoform 1 OS=Theobroma cacao GN=TCM_015161 PE=4 SV=1) HSP 1 Score: 339.0 bits (868), Expect = 4.700e-90 Identity = 171/230 (74.35%), Postives = 198/230 (86.09%), Query Frame = 1
BLAST of Spo12884.1 vs. ExPASy Swiss-Prot
Match: ACFR1_ARATH (Transmembrane ascorbate ferrireductase 1 OS=Arabidopsis thaliana GN=CYB561A PE=1 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 3.200e-84 Identity = 157/240 (65.42%), Postives = 193/240 (80.42%), Query Frame = 1
BLAST of Spo12884.1 vs. ExPASy Swiss-Prot
Match: ACET1_ORYSJ (Probable ascorbate-specific transmembrane electron transporter 1 OS=Oryza sativa subsp. japonica GN=Os02g0642300 PE=3 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 2.300e-77 Identity = 143/210 (68.10%), Postives = 171/210 (81.43%), Query Frame = 1
BLAST of Spo12884.1 vs. ExPASy Swiss-Prot
Match: ACET2_ORYSJ (Probable ascorbate-specific transmembrane electron transporter 2 OS=Oryza sativa subsp. japonica GN=Os04g0533500 PE=2 SV=2) HSP 1 Score: 283.5 bits (724), Expect = 2.100e-75 Identity = 145/218 (66.51%), Postives = 170/218 (77.98%), Query Frame = 1
BLAST of Spo12884.1 vs. ExPASy Swiss-Prot
Match: ACFR2_MAIZE (Ascorbate-specific transmembrane electron transporter 2 OS=Zea mays PE=2 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 2.300e-74 Identity = 140/214 (65.42%), Postives = 168/214 (78.50%), Query Frame = 1
BLAST of Spo12884.1 vs. ExPASy Swiss-Prot
Match: ACET1_MAIZE (Ascorbate-specific transmembrane electron transporter 1 OS=Zea mays GN=ZCYB PE=1 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 4.400e-73 Identity = 137/214 (64.02%), Postives = 167/214 (78.04%), Query Frame = 1
BLAST of Spo12884.1 vs. TAIR (Arabidopsis)
Match: AT4G25570.1 (Cytochrome b561/ferric reductase transmembrane protein family) HSP 1 Score: 312.8 bits (800), Expect = 1.800e-85 Identity = 157/240 (65.42%), Postives = 193/240 (80.42%), Query Frame = 1
BLAST of Spo12884.1 vs. TAIR (Arabidopsis)
Match: AT5G38630.1 (cytochrome B561-1) HSP 1 Score: 203.4 bits (516), Expect = 1.600e-52 Identity = 98/208 (47.12%), Postives = 139/208 (66.83%), Query Frame = 1
BLAST of Spo12884.1 vs. TAIR (Arabidopsis)
Match: AT1G14730.1 (Cytochrome b561/ferric reductase transmembrane protein family) HSP 1 Score: 149.8 bits (377), Expect = 2.100e-36 Identity = 72/198 (36.36%), Postives = 120/198 (60.61%), Query Frame = 1
BLAST of Spo12884.1 vs. TAIR (Arabidopsis)
Match: AT1G26100.1 (Cytochrome b561/ferric reductase transmembrane protein family) HSP 1 Score: 131.3 bits (329), Expect = 7.500e-31 Identity = 79/227 (34.80%), Postives = 124/227 (54.63%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo12884.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo12884.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo12884.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo12884.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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