Spo12873 (gene)

Overview
NameSpo12873
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionCBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor
Locationchr3 : 2111585 .. 2116433 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCATAAACCTTTAAACCAAAGTTCTGAAAAAGTCAAAATTACAGTCTCTCTCATTAGACCACATTCCCCAATTCTCCTCCTCCTTCCTCCCGAACCAGAGCAGCAACAATGGCGTTGAAGTTTCTGAACAAGAAAGGATGGCATACTGGAAGCCTTCGAAACATCGAGAACGTCTGGAAAGCCGAACAGAAAAACGAAGCCGAACAACGCAAATTGGAGGAGCTTCGGAAGCAGATTATCGAGGAGAGAGAGCGTGATGAGTTTCGTGTTCTTCAAGAGCAAGCTGGCCTCACCCCGTAATTAATCTCCTCTTTTACTCATTTCCAATTTTCATTATCACGATTGTTAGATGTTTGTGTTTGTGTAGCCAATTTAGGGTTAGGGTTCTTAATTGGCTAATCTATCAATTTGATTGTTGTTGTAGGAGGCAAGAAAGATTGGAATTTCTGTATGATTCCGGATTAGCTGTTGGAAAACCCAGTTCTGATGGGTTTCAAGCACTTGGGAGTTTCCCTAGTGCTGATAATTCTGCATCGGCATCGGCATCGGCACCGGTATTGGCTTCAGCACCGGCTCCATCGTCGGAAGCGGTGAGCTCTTGTAACTTAATTGTGGCTTGATTAGTTTTATATTTGGTGAATTTTGGGATTTTTGTGTGTTTGTCACTCTATTGTATGATTTCACTTCGAATGTACTATAATTTAATTAAACCAAACATTTGCATAAAAGGGTTTGTGTTGATTGGTAATCACTTGTTTATTTTCTGTGCATTGTATAGAAAGCTATAGCTAGATTGGATGCTTCTGTATGGCCTTGCTGTAGACACGGAATTTATTTACCCAGGAAGTATTTTGGATCTTTGGAGTTGAGAAGAATTTAGGTATTTGGAGAAAGTTAATGGCCAAAATTGAGCTTATTTTTATGGTTTGATCGCGTTAGTATAAAGTTGAGAAAGATTGAAGCCTCATTCTAGGGAAATAAGTTAGACAACTACATGATTTATGCTGCTTCTTAGTGTGTTTATGAGTCTCCTCGTGAAAATAGTGTTAATTATAGTGGTTTGATCATTTTAGTAGTTAGAAGACCAGTTTGAATTGATGATACAATAAGAAGTTATTCTGTTGAATGTAGAAGAGTCTTTCTGAATTTGTGCAACTTTGAAGAGATAATTATATATTGAATGGCTGTAAGAGTGCAAGACTTTTATCGGCTGCTAGAGTATAAGGCATGCAACAAGAGCTTGCTATTTGTAGTACATATATTCCTGGAAAAAAAAATGCAGTAACTCGTATTCTCATGTAATTGTTGTATCTTTTTGTGATGTTATGAAGTTAGTTGATGTGTGTCAGTTGAACATGGTAGGCTGTTCTGAGGGGTAAGGTTTTGTGTAGGAAAAAATCGAAAAAGATGAGATGGTAATTTCTCATAATTGGAGTGTTCCTGCTTCTTACTTGTGGTAGCACATCATCTATGCTGATGCCGCTGTGGGAATGAACGGAACCATCAGATGCCTTATTATACAGCTTAATTTTGGATTTTTCACGAGTCCTTTGATTGGAGTGATTATCCTAGAGTCCTGGGAAGAAGCATCTGCTTGAAAATTTGCAGAAGGAAGGATTGTGTCCCTAATGGTGCTCTAAAACCTAGAACAAGGTTGCAGTAGTTTGCCTTTATTTTACATTTTATAATAGCTGCCGTTCTCTTGGAAATATATCTTGTGCTTTCTTGCGAACATTTTCCATTTTATGATTACGAGATATGTTTGGAATTTGGTGATTCTGTTGCATTCCACAATTCTGTTCTCCATCTGGTTTGGAAGTACCCAAAGTGTTCATAGAGGTGAGTGTGAGTCCTAGAATAGAAGCAGTCTCATTATAGGTTGTTCCATCGCTTGTAAAGTGTATATGTTCAACCAAATGGGTCAATTTTCTTCTTTTCTTGATGTAAATTTTGCTTTTGCATTGTCTTGTCCTATTCCGTGCTTTATGCATACAAATATTTTGGTTGACATTATGCTGAAAGTTTGTTCTAGTTGCAGCAGCATATCAGATGCTTTGACTCCTTGCCATGGTTGTTTCAACTTGTGGATCCTGGTTATTGTCGTGGATACTAATTACTACGAAGTAGTTCATTAACATTGAGCTGGCTGCCTTCAATTTAACTCGTTCTTTTATCTGCTGTAGTTTTTGGTTGAAGTTTTACACATTTGATTTTCAAAATTGCAGCAACCAGCTGTCCCTGGAGCTTTGTTTGAAGAGAAACCACAATCTGCCAATGACGCTTGGAGGAAACTCCATTCAGATCCACTGCTGATGATTCGGCAAAGAGAGCAAGAAGCTATGGCTCGAATAAAGAACAATCCAGTAAAGATGGCTATGATTCGTAAATCAGTAAGTTTTTCCTCTGTATTAGCAATCTTTCTTTCTAAAATCTTACAGTCATGTACATTTGAGTCTATTTGTTTGTTAGCCTGCCAGCCTGCAGACTACTGTTCATGTATTGGCCAATATACAATATACATAACCGAGTTTGTTTGCATGTACTGTTGGATCTAAGGCTCCGTTTGGTAGGGTGTAAAACGTTTTCATGGAAAACAATTTTCCCCTTTTCAACCATTTTACGTTATTTGGTTTGGCAAGGGATGGAAAACATTTTCCATTTGAAACCTTTCCTCCTTACCTCCTCTCCCTTCTTCCCCTCAAACTTCACCATCTTCTCTCATTTTCTTTTAAGGGACCAAACAAAGGACAATTAGTTTGGAATTATGTTTTCCCTTGGAAAATGTTTTGCATGGAAAATCAATTTACACTGAAAACCTTTTACATCAAACCAAACGGAGCCTAAGAGTAAATTGTTATATACTTATATCAATATGAGTCCAAATTCGTTAGCCAGACAGCCAGTAGTCAATTAAGATGCAACGAAGGCATGCATCCGGATCACATTGGGTGTTATTGCTTTGATTTGATGAATCGTTTCTTTCTAGCATTACATGTTACATAGAATTTCTCTACTGCATTTGCAAAATTCAAATTTATCATCTTTTGCAAGTAAAACAGAATGCCTGACAGTGAGAATCAGCTAAGTTGATTGATTAGCTGCCATAGCGAGGATTACATTGGGCGTGTTTTCTCTCGGTCTTCTACGGCCATCTTGATCCCCGACAACGGATTCTTGCTAATTACTATATTATGTTAATCATCATCTCTTTGTTACTTTTAAATGGAAAGACTTCAATTACTTGATTTATTACTTCGTATGGTTTTGTTTTTGTGAAAATATTAGCGACTTTCTAACACAGAAAACCTTCCCCTTTCAGGTCGAATCAAAGAAAAAACACGATGAGTCTCATGATGGGAAACACCAAAAGGTGAAATCAAAACATAAAAAGCACTCTTCCTCGTCCAAGCATCACTCAGAATCTGAAAGTGATAGTCACGAAGAGAGAGAAAGAAGAAGGAAGGTGAAGCAACAAAGGAAAGAACATCACTCAGAATCAGAAAGTGATAGTCATGAAGAGAGAGAAAGAAGAAGGAAGGTGAAGCAAAAAAGGAAAGAACATCACTCAGACACGGAAAGTGATGAAGAGAGAGAAAGGAGAAGAAAGACGAAGAACAAGAAGAAAGAACATTCAGATTCTGACGAGGACGACTCCAGAGACAGAACCAGACATCATAAACATTCACACAGAAACTATGATGGAAAGCAAAAATCAGACAGAAATAAAGACAGTGATCGAATTCAGAGAGGATACGAGAATTCAAAACATTCCGAGTATGAATCAAAGCATACTGGTTTGCCACCTAGGCAGGATTATCATGAATCAAAGCATGGTTTGCCACCTATGCAGGATTATCACGAATCAAAGCATACTGGTTTGCCACCTAGGCAGGATTATCACGAATCAAAGCATACGGCTTTGCCACCTAGGCAGGAGTCACACAGGCGGCGAGGTAGGGCCCCACAACTCTCGGAAGAAGAACGGGCGGCTAGGTTGAGAGAGATGCAAATGGATGCTGAGACTCACGAAGAGCAACGATGGAAAAGGTTGAAGAAGGCGGATGAGAATGATGCACGTGAAGCTAGCCAAGCGGGGAATTCCCGAGGGGGGAAGTCGTTCCTCGATTCTGTTCAGAAGAGTGTGTACGGTGCTGAGAAAGGAGGGAGTTCGACGATCGAGGAAAGTGTTCGTCGTCGTTCACATTTTCTTCAGGGAAGGTCATCAGCTGATGAGGGTAATGCTTTTCGAAGGTGATGGATGAAGGTGGGTTGCATGTTGTTCTTCATGATAACAATGTTTATCGTTTAATCCTTGAATGAGGTGGTTCTCAATGTTCAGTTGGATATTTGTTTTTTGAGATTTATAGGATCCATGTAAATTAAGTGGGAAACCAGAGGCGATAACATATACTCCCTCCGTCCCTTAATACTCGCACCGTTTTGACTGGACACGCTTGCCAATGCACTTCTTTGACCACTAATATCTTTAATTACATATTATAAAAACTTATAAAATATTAATATTTTGAAAATATGTATTAAGATGAAGCCAACAATATATTATATCTAATATTTGTTTTCATATACTATAAATAAAATAAGGTCAAAATGAATTATGTGAATAGTGCAAAAAGTCAAAATGGTGCGAGTATTAAGGGACAGAGGGAGTAGCTTCTTCTTTTTGGACAAGAAACATATAGCTATATGATTTGTTGTTGTAAAAATGATTTATTTTTTCACAAATTCTTATTTACAATGGTTGTACACTAAATATTGTACACCGGAGTAAAAGTTAACTCAAAATGATTAAAAGTTAAGCATATATAGGTAAAAGTTATTTATTTTTG

mRNA sequence

AATCATAAACCTTTAAACCAAAGTTCTGAAAAAGTCAAAATTACAGTCTCTCTCATTAGACCACATTCCCCAATTCTCCTCCTCCTTCCTCCCGAACCAGAGCAGCAACAATGGCGTTGAAGTTTCTGAACAAGAAAGGATGGCATACTGGAAGCCTTCGAAACATCGAGAACGTCTGGAAAGCCGAACAGAAAAACGAAGCCGAACAACGCAAATTGGAGGAGCTTCGGAAGCAGATTATCGAGGAGAGAGAGCGTGATGAGTTTCGTGTTCTTCAAGAGCAAGCTGGCCTCACCCCGAGGCAAGAAAGATTGGAATTTCTGTATGATTCCGGATTAGCTGTTGGAAAACCCAGTTCTGATGGGTTTCAAGCACTTGGGAGTTTCCCTAGTGCTGATAATTCTGCATCGGCATCGGCATCGGCACCGGTATTGGCTTCAGCACCGGCTCCATCGTCGGAAGCGCAACCAGCTGTCCCTGGAGCTTTGTTTGAAGAGAAACCACAATCTGCCAATGACGCTTGGAGGAAACTCCATTCAGATCCACTGCTGATGATTCGGCAAAGAGAGCAAGAAGCTATGGCTCGAATAAAGAACAATCCAGTAAAGATGGCTATGATTCGTAAATCAGTCGAATCAAAGAAAAAACACGATGAGTCTCATGATGGGAAACACCAAAAGGTGAAATCAAAACATAAAAAGCACTCTTCCTCGTCCAAGCATCACTCAGAATCTGAAAGTGATAGTCACGAAGAGAGAGAAAGAAGAAGGAAGGTGAAGCAACAAAGGAAAGAACATCACTCAGAATCAGAAAGTGATAGTCATGAAGAGAGAGAAAGAAGAAGGAAGGTGAAGCAAAAAAGGAAAGAACATCACTCAGACACGGAAAGTGATGAAGAGAGAGAAAGGAGAAGAAAGACGAAGAACAAGAAGAAAGAACATTCAGATTCTGACGAGGACGACTCCAGAGACAGAACCAGACATCATAAACATTCACACAGAAACTATGATGGAAAGCAAAAATCAGACAGAAATAAAGACAGTGATCGAATTCAGAGAGGATACGAGAATTCAAAACATTCCGAGTATGAATCAAAGCATACTGGTTTGCCACCTAGGCAGGATTATCATGAATCAAAGCATGGTTTGCCACCTATGCAGGATTATCACGAATCAAAGCATACTGGTTTGCCACCTAGGCAGGATTATCACGAATCAAAGCATACGGCTTTGCCACCTAGGCAGGAGTCACACAGGCGGCGAGGTAGGGCCCCACAACTCTCGGAAGAAGAACGGGCGGCTAGGTTGAGAGAGATGCAAATGGATGCTGAGACTCACGAAGAGCAACGATGGAAAAGGTTGAAGAAGGCGGATGAGAATGATGCACGTGAAGCTAGCCAAGCGGGGAATTCCCGAGGGGGGAAGTCGTTCCTCGATTCTGTTCAGAAGAGTGTGTACGGTGCTGAGAAAGGAGGGAGTTCGACGATCGAGGAAAGTGTTCGTCGTCGTTCACATTTTCTTCAGGGAAGGTCATCAGCTGATGAGGGTAATGCTTTTCGAAGGTGATGGATGAAGGTGGGTTGCATGTTGTTCTTCATGATAACAATGTTTATCGTTTAATCCTTGAATGAGGTGGTTCTCAATGTTCAGTTGGATATTTGTTTTTTGAGATTTATAGGATCCATGTAAATTAAGTGGGAAACCAGAGGCGATAACATATACTCCCTCCGTCCCTTAATACTCGCACCGTTTTGACTGGACACGCTTGCCAATGCACTTCTTTGACCACTAATATCTTTAATTACATATTATAAAAACTTATAAAATATTAATATTTTGAAAATATGTATTAAGATGAAGCCAACAATATATTATATCTAATATTTGTTTTCATATACTATAAATAAAATAAGGTCAAAATGAATTATGTGAATAGTGCAAAAAGTCAAAATGGTGCGAGTATTAAGGGACAGAGGGAGTAGCTTCTTCTTTTTGGACAAGAAACATATAGCTATATGATTTGTTGTTGTAAAAATGATTTATTTTTTCACAAATTCTTATTTACAATGGTTGTACACTAAATATTGTACACCGGAGTAAAAGTTAACTCAAAATGATTAAAAGTTAAGCATATATAGGTAAAAGTTATTTATTTTTG

Coding sequence (CDS)

ATGGCGTTGAAGTTTCTGAACAAGAAAGGATGGCATACTGGAAGCCTTCGAAACATCGAGAACGTCTGGAAAGCCGAACAGAAAAACGAAGCCGAACAACGCAAATTGGAGGAGCTTCGGAAGCAGATTATCGAGGAGAGAGAGCGTGATGAGTTTCGTGTTCTTCAAGAGCAAGCTGGCCTCACCCCGAGGCAAGAAAGATTGGAATTTCTGTATGATTCCGGATTAGCTGTTGGAAAACCCAGTTCTGATGGGTTTCAAGCACTTGGGAGTTTCCCTAGTGCTGATAATTCTGCATCGGCATCGGCATCGGCACCGGTATTGGCTTCAGCACCGGCTCCATCGTCGGAAGCGCAACCAGCTGTCCCTGGAGCTTTGTTTGAAGAGAAACCACAATCTGCCAATGACGCTTGGAGGAAACTCCATTCAGATCCACTGCTGATGATTCGGCAAAGAGAGCAAGAAGCTATGGCTCGAATAAAGAACAATCCAGTAAAGATGGCTATGATTCGTAAATCAGTCGAATCAAAGAAAAAACACGATGAGTCTCATGATGGGAAACACCAAAAGGTGAAATCAAAACATAAAAAGCACTCTTCCTCGTCCAAGCATCACTCAGAATCTGAAAGTGATAGTCACGAAGAGAGAGAAAGAAGAAGGAAGGTGAAGCAACAAAGGAAAGAACATCACTCAGAATCAGAAAGTGATAGTCATGAAGAGAGAGAAAGAAGAAGGAAGGTGAAGCAAAAAAGGAAAGAACATCACTCAGACACGGAAAGTGATGAAGAGAGAGAAAGGAGAAGAAAGACGAAGAACAAGAAGAAAGAACATTCAGATTCTGACGAGGACGACTCCAGAGACAGAACCAGACATCATAAACATTCACACAGAAACTATGATGGAAAGCAAAAATCAGACAGAAATAAAGACAGTGATCGAATTCAGAGAGGATACGAGAATTCAAAACATTCCGAGTATGAATCAAAGCATACTGGTTTGCCACCTAGGCAGGATTATCATGAATCAAAGCATGGTTTGCCACCTATGCAGGATTATCACGAATCAAAGCATACTGGTTTGCCACCTAGGCAGGATTATCACGAATCAAAGCATACGGCTTTGCCACCTAGGCAGGAGTCACACAGGCGGCGAGGTAGGGCCCCACAACTCTCGGAAGAAGAACGGGCGGCTAGGTTGAGAGAGATGCAAATGGATGCTGAGACTCACGAAGAGCAACGATGGAAAAGGTTGAAGAAGGCGGATGAGAATGATGCACGTGAAGCTAGCCAAGCGGGGAATTCCCGAGGGGGGAAGTCGTTCCTCGATTCTGTTCAGAAGAGTGTGTACGGTGCTGAGAAAGGAGGGAGTTCGACGATCGAGGAAAGTGTTCGTCGTCGTTCACATTTTCTTCAGGGAAGGTCATCAGCTGATGAGGGTAATGCTTTTCGAAGGTGA

Protein sequence

MALKFLNKKGWHTGSLRNIENVWKAEQKNEAEQRKLEELRKQIIEERERDEFRVLQEQAGLTPRQERLEFLYDSGLAVGKPSSDGFQALGSFPSADNSASASASAPVLASAPAPSSEAQPAVPGALFEEKPQSANDAWRKLHSDPLLMIRQREQEAMARIKNNPVKMAMIRKSVESKKKHDESHDGKHQKVKSKHKKHSSSSKHHSESESDSHEERERRRKVKQQRKEHHSESESDSHEERERRRKVKQKRKEHHSDTESDEERERRRKTKNKKKEHSDSDEDDSRDRTRHHKHSHRNYDGKQKSDRNKDSDRIQRGYENSKHSEYESKHTGLPPRQDYHESKHGLPPMQDYHESKHTGLPPRQDYHESKHTALPPRQESHRRRGRAPQLSEEERAARLREMQMDAETHEEQRWKRLKKADENDAREASQAGNSRGGKSFLDSVQKSVYGAEKGGSSTIEESVRRRSHFLQGRSSADEGNAFRR
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo12873.1Spo12873.1mRNA


Homology
[Close]
BLAST of Spo12873.1 vs. NCBI nr
Match: gi|902235435|gb|KNA23905.1| (hypothetical protein SOVF_019490 [Spinacia oleracea])

HSP 1 Score: 869.8 bits (2246), Expect = 2.300e-249
Identity = 484/484 (100.00%), Postives = 484/484 (100.00%), Query Frame = 1 

		  

Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKNEAEQRKLEELRKQIIEERERDEFRVLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKNEAEQRKLEELRKQIIEERERDEFRVLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKNEAEQRKLEELRKQIIEERERDEFRVLQEQAG 60

Query: 61  LTPRQERLEFLYDSGLAVGKPSSDGFQALGSFPSADNSASASASAPVLASAPAPSSEAQP 120
           LTPRQERLEFLYDSGLAVGKPSSDGFQALGSFPSADNSASASASAPVLASAPAPSSEAQP
Sbjct: 61  LTPRQERLEFLYDSGLAVGKPSSDGFQALGSFPSADNSASASASAPVLASAPAPSSEAQP 120

Query: 121 AVPGALFEEKPQSANDAWRKLHSDPLLMIRQREQEAMARIKNNPVKMAMIRKSVESKKKH 180
           AVPGALFEEKPQSANDAWRKLHSDPLLMIRQREQEAMARIKNNPVKMAMIRKSVESKKKH
Sbjct: 121 AVPGALFEEKPQSANDAWRKLHSDPLLMIRQREQEAMARIKNNPVKMAMIRKSVESKKKH 180

Query: 181 DESHDGKHQKVKSKHKKHSSSSKHHSESESDSHEERERRRKVKQQRKEHHSESESDSHEE 240
           DESHDGKHQKVKSKHKKHSSSSKHHSESESDSHEERERRRKVKQQRKEHHSESESDSHEE
Sbjct: 181 DESHDGKHQKVKSKHKKHSSSSKHHSESESDSHEERERRRKVKQQRKEHHSESESDSHEE 240

Query: 241 RERRRKVKQKRKEHHSDTESDEERERRRKTKNKKKEHSDSDEDDSRDRTRHHKHSHRNYD 300
           RERRRKVKQKRKEHHSDTESDEERERRRKTKNKKKEHSDSDEDDSRDRTRHHKHSHRNYD
Sbjct: 241 RERRRKVKQKRKEHHSDTESDEERERRRKTKNKKKEHSDSDEDDSRDRTRHHKHSHRNYD 300

Query: 301 GKQKSDRNKDSDRIQRGYENSKHSEYESKHTGLPPRQDYHESKHGLPPMQDYHESKHTGL 360
           GKQKSDRNKDSDRIQRGYENSKHSEYESKHTGLPPRQDYHESKHGLPPMQDYHESKHTGL
Sbjct: 301 GKQKSDRNKDSDRIQRGYENSKHSEYESKHTGLPPRQDYHESKHGLPPMQDYHESKHTGL 360

Query: 361 PPRQDYHESKHTALPPRQESHRRRGRAPQLSEEERAARLREMQMDAETHEEQRWKRLKKA 420
           PPRQDYHESKHTALPPRQESHRRRGRAPQLSEEERAARLREMQMDAETHEEQRWKRLKKA
Sbjct: 361 PPRQDYHESKHTALPPRQESHRRRGRAPQLSEEERAARLREMQMDAETHEEQRWKRLKKA 420

Query: 421 DENDAREASQAGNSRGGKSFLDSVQKSVYGAEKGGSSTIEESVRRRSHFLQGRSSADEGN 480
           DENDAREASQAGNSRGGKSFLDSVQKSVYGAEKGGSSTIEESVRRRSHFLQGRSSADEGN
Sbjct: 421 DENDAREASQAGNSRGGKSFLDSVQKSVYGAEKGGSSTIEESVRRRSHFLQGRSSADEGN 480

Query: 481 AFRR 485
           AFRR
Sbjct: 481 AFRR 484
[Close]
BLAST of Spo12873.1 vs. NCBI nr
Match: gi|731363636|ref|XP_010693532.1| (PREDICTED: pre-mRNA-splicing factor CWC25 homolog [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 531.6 bits (1368), Expect = 1.500e-147
Identity = 343/494 (69.43%), Postives = 383/494 (77.53%), Query Frame = 1 

		  

Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKNEAEQRKLEELRKQIIEERERDEFRVLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQK+EAE+RKL+ELRKQI EERERDEFR+LQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEERKLDELRKQIHEERERDEFRLLQEQAG 60

Query: 61  LTPRQERLEFLYDSGLAVGKPSSDGFQALGSFPSADNSASASASAPVLASAPAPSSEAQP 120
           LTPRQERLEFLYDSGLAVGK  SDGF+AL   PSADNSASAS SA   ASA APS   Q 
Sbjct: 61  LTPRQERLEFLYDSGLAVGKTISDGFKALEPHPSADNSASASVSAS--ASASAPSLSNQS 120

Query: 121 AVPGALFEEKPQSANDAWRKLHSDPLLMIRQREQEAMARIKNNPVKMAMIRKSVESKKKH 180
           AVPGALFE+KPQSANDAWRKLHSDPLLMIRQREQEA+ARIKNNPVKMAMIRKSVE+K K+
Sbjct: 121 AVPGALFEDKPQSANDAWRKLHSDPLLMIRQREQEALARIKNNPVKMAMIRKSVETKNKN 180

Query: 181 DESHDGKHQKVKSKHKKHSSSSKHHSESESDSHEERERRRKVKQQRKEHHSESESDSHEE 240
           DESH G+ +KVKSKH+KH S   H S+SE+DSHEERER++KVK+++KE  S +ESD    
Sbjct: 181 DESHAGERKKVKSKHRKHLSI--HQSDSETDSHEERERKKKVKRKKKERGSNTESD---- 240

Query: 241 RERRRKVKQKRKEHHSDTESDEERERRRKTKNKKKEHSDSDEDDSRDRTRHHKHSHRNYD 300
                               DE+ ER+R+ KNKKKE  DS E+DSRDR+RHH+H+HR+ +
Sbjct: 241 -------------------GDEKGERKRRVKNKKKEDVDS-EEDSRDRSRHHRHTHRDNE 300

Query: 301 G---------KQKSDRNKDSDRIQRGYENSKHSEYES-KHTGLPPRQDYHESKHGLPPMQ 360
                     KQK DRNKD +R QRGYE SKH EY S +H    P +D   S  G     
Sbjct: 301 SEKQQHSSPIKQKPDRNKDYERTQRGYEKSKHEEYRSDRHIDRSPHKDNGMSNQG----- 360

Query: 361 DYHESKHTGLPPRQDYHESKHTALPPRQESHRRRGRAPQLSEEERAARLREMQMDAETHE 420
                           ++SKHTALPPR +S+RRRGRA QLSEEERAARLREMQMDAE HE
Sbjct: 361 ----------------NDSKHTALPPRPDSYRRRGRATQLSEEERAARLREMQMDAEKHE 420

Query: 421 EQRWKRLKKADENDAREASQAGNSRGGKSFLDSVQKSVYGAEKGGSSTIEESVRRRSHFL 480
           EQRW+RLKKAD +DAREASQAGNSR G+SFL SVQKSVYGAEKGGSSTIEESVRRRSHFL
Sbjct: 421 EQRWQRLKKADADDAREASQAGNSR-GRSFLHSVQKSVYGAEKGGSSTIEESVRRRSHFL 443

Query: 481 QGRSSADEGNAFRR 485
           QGR +ADEGNAFRR
Sbjct: 481 QGR-TADEGNAFRR 443
[Close]
BLAST of Spo12873.1 vs. NCBI nr
Match: gi|720052827|ref|XP_010272534.1| (PREDICTED: pre-mRNA-splicing factor CWC25 homolog [Nelumbo nucifera])

HSP 1 Score: 352.4 bits (903), Expect = 1.200e-93
Identity = 266/493 (53.96%), Postives = 318/493 (64.50%), Query Frame = 1 

		  

Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKNEAEQRKLEELRKQIIEERERDEFRVLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQK+EAEQ+KLEELRKQI EERER EFRVLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIQEERERSEFRVLQEQAG 60

Query: 61  LTPRQERLEFLYDSGLAVGKPSSDGFQALGSFPSADNSASASASAPVLASAPAPSSEAQP 120
           L P+QERL+FLY+SGLAVGK SSDGF+AL  FP ++  A++S            SS+ Q 
Sbjct: 61  LVPKQERLDFLYESGLAVGKGSSDGFKALEVFPKSETDATSS------------SSKQQT 120

Query: 121 AVPGALFEEKPQSANDAWRKLHSDPLLMIRQREQEAMARIKNNPVKMAMIRKSVESKKKH 180
            VPGALFEEKPQSANDAWRKLHSDPLL+IRQ+EQEA+ARIKNNP++MAMIRKSVE   K 
Sbjct: 121 CVPGALFEEKPQSANDAWRKLHSDPLLLIRQQEQEALARIKNNPIQMAMIRKSVEEVNKE 180

Query: 181 DESH-DGKHQKVKSKHKKHSSSSKHHSESESDSHEERERRRKVKQQRKEHHSESESDSHE 240
           ++ H + KH   + KHKK     KHH E                + +   HS S +D   
Sbjct: 181 NKKHKEDKH--TRKKHKK-----KHHFE----------------KSKHGKHSLS-NDQLR 240

Query: 241 ERERRRKVKQKRKEHHSDTESDEERERRRKTKNKKKEHSDSDED--DSRDRTRHHKHS-H 300
             E+  K+++ R + H               KN     SDS+ D  + R + RHHK S H
Sbjct: 241 SNEKEEKIERSRNKRHE--------------KNSPDGWSDSEADTREERGKKRHHKDSKH 300

Query: 301 RNYDGKQKSDRNKDSDRIQRGYENSKHSEYESKHTGLPPRQDYHESKHGLPPMQDYHESK 360
           R++  K +SD    S     G E  K    +SKH   PP      SK      +++  S 
Sbjct: 301 RDHSSKGQSDSEGFSSD---GEETRKGGHSKSKHGKHPPEGGL-VSKDAKEHTRNWRTSN 360

Query: 361 HTGLPPRQ----DYHESKHTALPPRQESHRR-RGRAPQLSEEERAARLREMQMDAETHEE 420
           H    P Q    +Y  S  +   P Q S+R+ R  AP+LSEEERA RLREMQMDAE +EE
Sbjct: 361 HGRHNPIQRSDTNYTRSDASKTEPWQGSYRKNRQAAPKLSEEERALRLREMQMDAELYEE 420

Query: 421 QRWKRLKKADENDAREASQAGNSRGGKSFLDSVQKSVYGAEKGGSSTIEESVRRRSHFLQ 480
           QRWKRLKKA E+DARE  QAG S GG+ FLD+ QK VYGA+KGGS TIEESVRRR+++LQ
Sbjct: 421 QRWKRLKKASEDDAREERQAGAS-GGRYFLDAAQKDVYGADKGGSFTIEESVRRRTYYLQ 438

Query: 481 GRSSADEGNAFRR 485
            +S   E NAFRR
Sbjct: 481 RQSDVSERNAFRR 438
[Close]
BLAST of Spo12873.1 vs. NCBI nr
Match: gi|1021508577|ref|XP_016197641.1| (PREDICTED: pre-mRNA-splicing factor CWC25 homolog [Arachis ipaensis])

HSP 1 Score: 350.1 bits (897), Expect = 6.100e-93
Identity = 263/496 (53.02%), Postives = 336/496 (67.74%), Query Frame = 1 

		  

Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKNEAEQRKLEELRKQIIEERERDEFRVLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQK++AEQ+KLEELRKQI EERER+EFR+LQE+AG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHDAEQKKLEELRKQIHEERERNEFRLLQEKAG 60

Query: 61  LTPRQERLEFLYDSGLAVGKPS-SDGFQALGSFPSADNSASASASAPVLASAPAPSSEAQ 120
           L P QERL+FLYDSGL+VG+ S ++GF+AL +FP  D SA A +S     SA A +S+  
Sbjct: 61  LVPAQERLDFLYDSGLSVGRSSNNEGFKALEAFPKPDASADAPSS-----SASASASKQ- 120

Query: 121 PAVPGALFEEKPQSANDAWRKLHSDPLLMIRQREQEAMARIKNNPVKMAMIRKSVESKKK 180
              PGALFE+KPQSAND+WRKLHSDPLLMIRQREQEA+A+IKNNPVKMAMI+KSVE    
Sbjct: 121 ---PGALFEDKPQSANDSWRKLHSDPLLMIRQREQEALAKIKNNPVKMAMIKKSVE---- 180

Query: 181 HDESHDGKHQKVKSKHKKHSSSS---KHHSESESDSHEERERRRKVKQQRKEHH---SES 240
            +  H  K    K K KKH SS    K HS+SE D+ E R+R+   +   + HH   S+S
Sbjct: 181 -ETEHKEKGHSKKEKRKKHHSSKLKLKRHSDSEDDTTERRKRKAGDRDSDRRHHKSLSDS 240

Query: 241 ESDSHEERERRRKVKQKRKEHHSDTESD-EERERRRKTKNKKKEHSDSDEDDSRDRTRHH 300
           E DS EE  +RRK + + K++    E D  E ERRRK+  + K++        R+R+  H
Sbjct: 241 EYDSSEEESKRRKSRFEDKKYKEKMEFDSSEEERRRKSHYEDKKY--------RERSPDH 300

Query: 301 KHSHRNYDGKQKSDRNKDSDRIQRGYENSKHSEYESKHTGLPPRQDYHESKHGLPPMQDY 360
            H       +++ D N +++R       S H  +   + G    ++Y++S+      Q  
Sbjct: 301 HH-------RERKDCNDEAER-----SPSHHQRHRKDYNGKRDDKNYNKSERYASERQSN 360

Query: 361 HESK----HTGLPPRQDYHESKHTALPPRQESHRRRGRAPQLSEEERAARLREMQMDAET 420
            ++     + G  P    + S  T+   R+  HRRR  AP+LSEEERAA+L++MQ+ AE 
Sbjct: 361 SDAPAKRVNNGSFPEPSLNRSAATS-HERESHHRRRYVAPKLSEEERAAKLKQMQLAAEL 420

Query: 421 HEEQRWKRLKKADENDAREASQAGNSRGGKSFLDSVQKSVYGAEKGGSSTIEESVRRRSH 480
           HEEQRWKR+KKA+E DAREA+Q  NS GG++FLD  QKSVYGA +GGS +I ESVRRR+H
Sbjct: 421 HEEQRWKRIKKAEETDAREATQNKNS-GGRNFLDDAQKSVYGAAEGGSKSIAESVRRRTH 459

Query: 481 FLQGRSSADEGNAFRR 485
           + QGRS   EGNAFRR
Sbjct: 481 YSQGRSGG-EGNAFRR 459
[Close]
BLAST of Spo12873.1 vs. NCBI nr
Match: gi|747095900|ref|XP_011095849.1| (PREDICTED: pre-mRNA-splicing factor CWC25 homolog [Sesamum indicum])

HSP 1 Score: 349.7 bits (896), Expect = 7.900e-93
Identity = 263/502 (52.39%), Postives = 329/502 (65.54%), Query Frame = 1 

		  

Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKNEAEQRKLEELRKQIIEERERDEFRVLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQK+EAEQ+KLEELRKQI EERER EFR LQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEERERAEFRQLQEQAG 60

Query: 61  LTPRQERLEFLYDSGLAVGKPSSDGFQALGSFPSADNSASASASAPVLASAPAPSSEAQP 120
           L P+QERL+FLYDSGLAVGK  S GF+AL S P  D   +AS S          +S  Q 
Sbjct: 61  LVPKQERLDFLYDSGLAVGKGGS-GFKALESLPKTDPETTASTS----------TSAKQS 120

Query: 121 AVPGALFEEKPQSANDAWRKLHSDPLLMIRQREQEAMARIKNNPVKMAMIRKSVESKK-- 180
             PGALFE+KPQSANDAWRKLHSDPLL+IRQREQEA+AR+KNNP++MAMIRKSV++K   
Sbjct: 121 EAPGALFEDKPQSANDAWRKLHSDPLLLIRQREQEALARVKNNPIQMAMIRKSVQAKNDK 180

Query: 181 -----KHDESHDGKHQKVKSKHKKHSSSSKHHSESESDSHEERERRRKVKQQRKEHHSES 240
                K +  H  KH + KSKH+KHSS     SE++SDS ++      V +Q   H   S
Sbjct: 181 DKDQDKDERKHRKKHHRKKSKHRKHSS-----SENDSDSEDDVV---TVGKQEDRHQKGS 240

Query: 241 ESDSHEERERRRKVKQKRKEHHSDTESDEERERRRKTKNKK-KEHSDSDE-----DDSRD 300
           ++D H           +   H SD E  EE  RR+K  +K+ K+   S       D S D
Sbjct: 241 KTDKH----------SRMAAHTSDKELSEEDARRKKYYDKEYKDRRPSGTHNPKYDKSDD 300

Query: 301 RTRHHKHSHRNYDGKQKSDRNKDSDRIQRGYENSKHS-----EYESKHTGLPPRQDYHES 360
           + +  ++  R   G      +K +D+ +R Y++ + S     +Y  +      ++ YH+S
Sbjct: 301 QQKSREYKDRRPSGTHNPINDKSNDQQKREYKDRRPSGSHSPKYNKRDDQQKNKRSYHDS 360

Query: 361 KHGLPPMQDYHESKHTGLPPRQDYHESKHTALPPRQESHRRRGRAPQLSEEERAARLREM 420
           +      +   ES+H     R  ++ S     PP  +S+ RR    +LSEEERAARLREM
Sbjct: 361 RREEYSSERQVESRH---DKRSHFNSSDK---PPMHDSNNRRRNTVKLSEEERAARLREM 420

Query: 421 QMDAETHEEQRWKRLKKADENDAREASQAGNSRGGKSFLDSVQKSVYGAEKGGSSTIEES 480
           QMDAE HEEQRWKRLKKA ++DA+EA    N+  G++FLD+ QKS+YGAEKGGSSTIEES
Sbjct: 421 QMDAERHEEQRWKRLKKAADSDAQEAIH-DNAPSGRNFLDAAQKSIYGAEKGGSSTIEES 465

Query: 481 VRRRSHFLQGRSSADEGNAFRR 485
           VRRR+H+LQGRS++D  NAFRR
Sbjct: 481 VRRRTHYLQGRSASD-SNAFRR 465
[Close]
BLAST of Spo12873.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RWJ3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_019490 PE=4 SV=1)

HSP 1 Score: 869.8 bits (2246), Expect = 1.600e-249
Identity = 484/484 (100.00%), Postives = 484/484 (100.00%), Query Frame = 1 

		  

Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKNEAEQRKLEELRKQIIEERERDEFRVLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKNEAEQRKLEELRKQIIEERERDEFRVLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKNEAEQRKLEELRKQIIEERERDEFRVLQEQAG 60

Query: 61  LTPRQERLEFLYDSGLAVGKPSSDGFQALGSFPSADNSASASASAPVLASAPAPSSEAQP 120
           LTPRQERLEFLYDSGLAVGKPSSDGFQALGSFPSADNSASASASAPVLASAPAPSSEAQP
Sbjct: 61  LTPRQERLEFLYDSGLAVGKPSSDGFQALGSFPSADNSASASASAPVLASAPAPSSEAQP 120

Query: 121 AVPGALFEEKPQSANDAWRKLHSDPLLMIRQREQEAMARIKNNPVKMAMIRKSVESKKKH 180
           AVPGALFEEKPQSANDAWRKLHSDPLLMIRQREQEAMARIKNNPVKMAMIRKSVESKKKH
Sbjct: 121 AVPGALFEEKPQSANDAWRKLHSDPLLMIRQREQEAMARIKNNPVKMAMIRKSVESKKKH 180

Query: 181 DESHDGKHQKVKSKHKKHSSSSKHHSESESDSHEERERRRKVKQQRKEHHSESESDSHEE 240
           DESHDGKHQKVKSKHKKHSSSSKHHSESESDSHEERERRRKVKQQRKEHHSESESDSHEE
Sbjct: 181 DESHDGKHQKVKSKHKKHSSSSKHHSESESDSHEERERRRKVKQQRKEHHSESESDSHEE 240

Query: 241 RERRRKVKQKRKEHHSDTESDEERERRRKTKNKKKEHSDSDEDDSRDRTRHHKHSHRNYD 300
           RERRRKVKQKRKEHHSDTESDEERERRRKTKNKKKEHSDSDEDDSRDRTRHHKHSHRNYD
Sbjct: 241 RERRRKVKQKRKEHHSDTESDEERERRRKTKNKKKEHSDSDEDDSRDRTRHHKHSHRNYD 300

Query: 301 GKQKSDRNKDSDRIQRGYENSKHSEYESKHTGLPPRQDYHESKHGLPPMQDYHESKHTGL 360
           GKQKSDRNKDSDRIQRGYENSKHSEYESKHTGLPPRQDYHESKHGLPPMQDYHESKHTGL
Sbjct: 301 GKQKSDRNKDSDRIQRGYENSKHSEYESKHTGLPPRQDYHESKHGLPPMQDYHESKHTGL 360

Query: 361 PPRQDYHESKHTALPPRQESHRRRGRAPQLSEEERAARLREMQMDAETHEEQRWKRLKKA 420
           PPRQDYHESKHTALPPRQESHRRRGRAPQLSEEERAARLREMQMDAETHEEQRWKRLKKA
Sbjct: 361 PPRQDYHESKHTALPPRQESHRRRGRAPQLSEEERAARLREMQMDAETHEEQRWKRLKKA 420

Query: 421 DENDAREASQAGNSRGGKSFLDSVQKSVYGAEKGGSSTIEESVRRRSHFLQGRSSADEGN 480
           DENDAREASQAGNSRGGKSFLDSVQKSVYGAEKGGSSTIEESVRRRSHFLQGRSSADEGN
Sbjct: 421 DENDAREASQAGNSRGGKSFLDSVQKSVYGAEKGGSSTIEESVRRRSHFLQGRSSADEGN 480

Query: 481 AFRR 485
           AFRR
Sbjct: 481 AFRR 484
[Close]
BLAST of Spo12873.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BCL9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g066820 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 1.000e-147
Identity = 343/494 (69.43%), Postives = 383/494 (77.53%), Query Frame = 1 

		  

Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKNEAEQRKLEELRKQIIEERERDEFRVLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQK+EAE+RKL+ELRKQI EERERDEFR+LQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEERKLDELRKQIHEERERDEFRLLQEQAG 60

Query: 61  LTPRQERLEFLYDSGLAVGKPSSDGFQALGSFPSADNSASASASAPVLASAPAPSSEAQP 120
           LTPRQERLEFLYDSGLAVGK  SDGF+AL   PSADNSASAS SA   ASA APS   Q 
Sbjct: 61  LTPRQERLEFLYDSGLAVGKTISDGFKALEPHPSADNSASASVSAS--ASASAPSLSNQS 120

Query: 121 AVPGALFEEKPQSANDAWRKLHSDPLLMIRQREQEAMARIKNNPVKMAMIRKSVESKKKH 180
           AVPGALFE+KPQSANDAWRKLHSDPLLMIRQREQEA+ARIKNNPVKMAMIRKSVE+K K+
Sbjct: 121 AVPGALFEDKPQSANDAWRKLHSDPLLMIRQREQEALARIKNNPVKMAMIRKSVETKNKN 180

Query: 181 DESHDGKHQKVKSKHKKHSSSSKHHSESESDSHEERERRRKVKQQRKEHHSESESDSHEE 240
           DESH G+ +KVKSKH+KH S   H S+SE+DSHEERER++KVK+++KE  S +ESD    
Sbjct: 181 DESHAGERKKVKSKHRKHLSI--HQSDSETDSHEERERKKKVKRKKKERGSNTESD---- 240

Query: 241 RERRRKVKQKRKEHHSDTESDEERERRRKTKNKKKEHSDSDEDDSRDRTRHHKHSHRNYD 300
                               DE+ ER+R+ KNKKKE  DS E+DSRDR+RHH+H+HR+ +
Sbjct: 241 -------------------GDEKGERKRRVKNKKKEDVDS-EEDSRDRSRHHRHTHRDNE 300

Query: 301 G---------KQKSDRNKDSDRIQRGYENSKHSEYES-KHTGLPPRQDYHESKHGLPPMQ 360
                     KQK DRNKD +R QRGYE SKH EY S +H    P +D   S  G     
Sbjct: 301 SEKQQHSSPIKQKPDRNKDYERTQRGYEKSKHEEYRSDRHIDRSPHKDNGMSNQG----- 360

Query: 361 DYHESKHTGLPPRQDYHESKHTALPPRQESHRRRGRAPQLSEEERAARLREMQMDAETHE 420
                           ++SKHTALPPR +S+RRRGRA QLSEEERAARLREMQMDAE HE
Sbjct: 361 ----------------NDSKHTALPPRPDSYRRRGRATQLSEEERAARLREMQMDAEKHE 420

Query: 421 EQRWKRLKKADENDAREASQAGNSRGGKSFLDSVQKSVYGAEKGGSSTIEESVRRRSHFL 480
           EQRW+RLKKAD +DAREASQAGNSR G+SFL SVQKSVYGAEKGGSSTIEESVRRRSHFL
Sbjct: 421 EQRWQRLKKADADDAREASQAGNSR-GRSFLHSVQKSVYGAEKGGSSTIEESVRRRSHFL 443

Query: 481 QGRSSADEGNAFRR 485
           QGR +ADEGNAFRR
Sbjct: 481 QGR-TADEGNAFRR 443
[Close]
BLAST of Spo12873.1 vs. UniProtKB/TrEMBL
Match: A0A151T6B0_CAJCA (Pre-mRNA-splicing factor cwc25 OS=Cajanus cajan GN=KK1_017129 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.300e-89
Identity = 250/485 (51.55%), Postives = 315/485 (64.95%), Query Frame = 1 

		  

Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKNEAEQRKLEELRKQIIEERERDEFRVLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQK++AEQ+KLEELRKQI EERER++FR+LQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHDAEQKKLEELRKQIQEERERNDFRLLQEQAG 60

Query: 61  LTPRQERLEFLYDSGLAVGKPS-SDGFQALGSFPSADNSASASASAPVLASAPAPSSEAQ 120
           L PRQERLEFLYDSGL+VGK S S+GF++L  FP +D      A+ P L+SA    S+  
Sbjct: 61  LVPRQERLEFLYDSGLSVGKSSNSEGFKSLEQFPKSD------ATEPPLSSA----SKEG 120

Query: 121 PAVPGALFEEKPQSANDAWRKLHSDPLLMIRQREQEAMARIKNNPVKMAMIRKSVESKKK 180
            +VPGALFE+KPQSANDAWRKLHSDPLLMIRQREQEA+A+IKNNPVKMAMI+KS+E  ++
Sbjct: 121 ASVPGALFEDKPQSANDAWRKLHSDPLLMIRQREQEALAKIKNNPVKMAMIKKSIEGTER 180

Query: 181 HDESHDGKHQKVKSKHKKHSSSSKHHSESESDSHEERERRRKVKQQRKEHHSESESDSHE 240
            +++H+ K      K KKH SS   H E +SDS ++   RRK K +++  H+      HE
Sbjct: 181 KEKAHNKKE-----KRKKHRSSKSKHKE-QSDSEDDTTERRKSKHKKQSRHNARSDSGHE 240

Query: 241 ERERRRKVKQKRKEHHSDTESDEERERRRKTKNKKKEHSDSDEDDSRDRTRHHKHSHRNY 300
                               SD E+ RR+           ++ +D R R R   H  R  
Sbjct: 241 S-------------------SDGEKRRRK-----------NNYEDKRYRERSPSHQWRQR 300

Query: 301 DGKQKSDRNKDSDRIQRGYENSKHSEYESKHTGLPPRQDYHESKHGLPPMQDYHESKHTG 360
           +GK   +     D   R Y  S+  +Y S+           +SK   P   D   S+ + 
Sbjct: 301 NGKDYKE-----DAGDRYYNMSRSEKYASEG----------QSKVDAPKSGDRRFSEASS 360

Query: 361 LPPRQDYHESKHTALPPRQESHRRRGRAPQLSEEERAARLREMQMDAETHEEQRWKRLKK 420
                 Y  S H     R   ++RR  AP+L++EERAA+LR MQ+ AE HEEQRWKR+KK
Sbjct: 361 ----NRYSASSHE----RGSHYKRRNVAPKLTDEERAAKLRHMQLAAELHEEQRWKRIKK 414

Query: 421 ADENDAREASQAGNSRGGKSFLDSVQKSVYGAEKGGSSTIEESVRRRSHFLQGRSSADEG 480
           A+E+DA+EA +  N  GGK+FLD+ QKSVYGA +GGS++I ESVRRR+H+ QGRS   EG
Sbjct: 421 AEESDAQEAIE-NNKAGGKNFLDTAQKSVYGAAEGGSTSIAESVRRRTHYSQGRSGG-EG 414

Query: 481 NAFRR 485
           NAFRR
Sbjct: 481 NAFRR 414
[Close]
BLAST of Spo12873.1 vs. UniProtKB/TrEMBL
Match: A0A103XTQ7_CYNCS (CBF1-interacting co-repressor CIR, N-terminal domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_001213 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 2.200e-89
Identity = 248/492 (50.41%), Postives = 325/492 (66.06%), Query Frame = 1 

		  

Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKNEAEQRKLEELRKQIIEERERDEFRVLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQK++AEQ+KLEELRKQI EERER EFR+LQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHDAEQKKLEELRKQIHEERERSEFRLLQEQAG 60

Query: 61  LTPRQERLEFLYDSGLAVGKPSSDGFQALGSFPSADNSASASASAPVLASAPAPSSEAQP 120
           L P+QERL+FLYDSGLAVGK +SDGF+AL SFP+              A    PSS  + 
Sbjct: 61  LVPKQERLDFLYDSGLAVGKGNSDGFKALESFPAK-------------AEPEQPSSANKA 120

Query: 121 AVPGALFEEKPQSANDAWRKLHSDPLLMIRQREQEAMARIKNNPVKMAMIRKSVESKKKH 180
           + PGALFE+KPQSANDAWRKLHSDPLL+I+QREQEA+AR+KNNPV+MAMI KSVE+KK  
Sbjct: 121 STPGALFEDKPQSANDAWRKLHSDPLLLIKQREQEALARVKNNPVQMAMIHKSVEAKKHK 180

Query: 181 DESHDG-----KHQKVKSKHKKHSSSSKHHSESESDSHEERERRRKVKQQRKEHHSESES 240
           +++ DG     KH + K KH+KH +SSKHH  S+ D  +   +R        +H    ++
Sbjct: 181 EKTSDGEKHKEKHHRKKLKHEKH-TSSKHHINSDDDVGQGEGQRSTSSSHYSKHKRNIQT 240

Query: 241 DSHEERERRRKVKQKRKEHHSDTESDEERERRRKTKNKKKEHSDSDEDDSRDRTRHHKHS 300
           +   + +R +  +   K+H     +  +RE    +++ K+E  D     S  R R     
Sbjct: 241 ERVRDGDRYQHERYHGKDHFGPQSTKRDREDHFSSQSAKREKEDHFGSQSTKRDR----- 300

Query: 301 HRNYDGKQKSDRNKDSDRIQRGYENSKHSEYESKHTGLPPRQDYHESKHGLPPMQDYHES 360
             ++ G Q + R+++     +  +  K   + S+ +      D+  S+      +D H  
Sbjct: 301 -EDHSGSQSTKRDREGHYSSQSAKRDKEDHFGSQ-SAKRDEADHSGSQSAKRDRED-HIG 360

Query: 361 KHTGLPPRQDYHESKHTALPPRQE---SHRRRGRAPQLSEEERAARLREMQMDAETHEEQ 420
             +G   ++D  + KH  LPPR      H RR  + +LSEEERAA+L+EMQMDAE HEEQ
Sbjct: 361 SQSG---KRDGEDRKH--LPPRHHKVGEHNRRNSSMKLSEEERAAKLKEMQMDAEVHEEQ 420

Query: 421 RWKRLKKADENDAREASQAGNSRGGKSFLDSVQKSVYGAEKGGSSTIEESVRRRSHFLQG 480
           RWKRLK+A ++DA+EA++A +S  G++FLD+  KSV+GAEKGGSSTIEESVRRR+H+ Q 
Sbjct: 421 RWKRLKQAADDDAKEATRASSS--GRNFLDAAHKSVFGAEKGGSSTIEESVRRRTHYSQR 460

Query: 481 RSSADEGNAFRR 485
           RS   E NAFRR
Sbjct: 481 RS---EENAFRR 460
[Close]
BLAST of Spo12873.1 vs. UniProtKB/TrEMBL
Match: K4BAV0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 1.800e-88
Identity = 248/487 (50.92%), Postives = 316/487 (64.89%), Query Frame = 1 

		  

Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKNEAEQRKLEELRKQIIEERERDEFRVLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQK++AEQRKLEELRKQI EERER EFR LQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHDAEQRKLEELRKQIQEERERSEFRQLQEQAG 60

Query: 61  LTPRQERLEFLYDSGLAVGKPSSDGFQALGSFPSADNSASASASAPVLASAPAPSSEAQP 120
           L  RQERLEFLYDSGLAVGK SS GF++L       +  +   +A V A+  + S++ Q 
Sbjct: 61  LVTRQERLEFLYDSGLAVGKGSSSGFESL-------SKPAEPVTAAVAAADSSSSAKPQA 120

Query: 121 AVPGALFEEKPQSANDAWRKLHSDPLLMIRQREQEAMARIKNNPVKMAMIRKSVESKKKH 180
           +VPGALFE+K QS+NDAWRKLHSDPLLMIRQREQEA+AR+KNNPV+MAMIRKSVE+ K  
Sbjct: 121 SVPGALFEDKSQSSNDAWRKLHSDPLLMIRQREQEALARVKNNPVQMAMIRKSVETMKNK 180

Query: 181 DESHDGKHQKVKSKHKKHSSSSK-HHSESESDSHEERERRRKVKQQRKEHHSESESDSHE 240
           D+ HD K +K + +HK     SK HHS+S+   +  R+          E+ SE +S    
Sbjct: 181 DKMHDEK-EKDERRHKHRDKKSKPHHSKSKHLKNSPRQT-----SDADEYLSEDDSRRKR 240

Query: 241 ERERRRKVKQKRKEHHSDTESDEERERRRKTKNKKKEHSDSDEDDSRDRTRHHKHSHRNY 300
           E  + +K+  ++     D +   +       K K K  +D++        +H +H+  + 
Sbjct: 241 ESRKDKKINDQKASIVRDPQGGNDFY-----KEKTKIRNDNEA------VKHERHARSDL 300

Query: 301 DGKQKSDRNKDSDRIQRGYENSKHSEYESKHTGLPPRQDYHESKHGLPPMQDYHESKHTG 360
             ++    +++  R       S  +  E   + +P  + +  S          HE   + 
Sbjct: 301 PRQESHRNSREHTRSDIPRHESHRNSREHTRSDIPRHESHRNS----------HEQTRSD 360

Query: 361 LPPRQDYHESKHTAL--PPRQESHRRRGRAPQLSEEERAARLREMQMDAETHEEQRWKRL 420
           +P  + +  S+      PPR ES     +  +LSEEERAARLREMQ DAE HEEQRWKRL
Sbjct: 361 IPRDESHRNSREQTRSDPPRHESRHNSRKPVRLSEEERAARLREMQKDAEVHEEQRWKRL 420

Query: 421 KKADENDAREASQAGNSRGGKSFLDSVQKSVYGAEKGGSSTIEESVRRRSHFLQGRSSAD 480
           KKADENDA+EA  AG+S GG++FLD+ Q+SVYGA KGGSSTIEESVRRR+H+ Q R+ A 
Sbjct: 421 KKADENDAKEAVHAGSS-GGRNFLDAAQRSVYGAGKGGSSTIEESVRRRTHYSQ-RAEAS 451

Query: 481 EGNAFRR 485
           EGNAFRR
Sbjct: 481 EGNAFRR 451
[Close]
BLAST of Spo12873.1 vs. TAIR (Arabidopsis)
Match: AT2G44200.1 (CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor)

HSP 1 Score: 306.6 bits (784), Expect = 2.700e-83
Identity = 246/504 (48.81%), Postives = 305/504 (60.52%), Query Frame = 1 

		  

Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKNEAEQRKLEELRKQIIEERERDEFRVLQEQAG 60
           M +KFLNKKGWHTGSLRNIE VWKAEQK EAEQ+KLEELR QI++ERER EFR LQEQAG
Sbjct: 1   MGMKFLNKKGWHTGSLRNIETVWKAEQKQEAEQKKLEELRLQILQERERSEFRALQEQAG 60

Query: 61  LTPRQERLEFLYDSGLAVGKPSSDGFQALGSFPSADNSASASASAPVLASAPAPSSEAQP 120
           L PRQERLEFLYDSGLAVGK S+ G     SF   +   + S +    +  P  S+    
Sbjct: 61  LIPRQERLEFLYDSGLAVGKGSASGSGV--SFQKEEQPLAKSEAGSSASEKPDQSA---- 120

Query: 121 AVPGALFEEKPQSANDAWRKLHSDPLLMIRQREQEAMARIKNNPVKMAMIRKSVESKKK- 180
             PGALFEEK QSAND+WRKLHSDPLL+IRQREQEA+A+IKNNPVKMA+IRKSVE K K 
Sbjct: 121 --PGALFEEKAQSANDSWRKLHSDPLLLIRQREQEALAKIKNNPVKMALIRKSVEEKGKG 180

Query: 181 ---HDESHDGKHQKVKSKHKKHSSSSKHHSESESDSHEERERRRKVKQQRKEHHSESESD 240
                + H  KH++   KH+K  SSS+  S+SE DS EE   R+   Q+    H      
Sbjct: 181 KDGDTKEHKKKHKRKSGKHQK-QSSSRQRSDSEEDSGEENNGRKSHHQKTSGTHDRHYER 240

Query: 241 SHEERERRRKVKQKRKEHHSDTES---DEERERRRKTKNKKKEHSDSDEDDSRDRTRHHK 300
              + E   K ++ R  H+    S   D  + R R   + ++  S+ D++  R  +R + 
Sbjct: 241 PRSDLEDESKGRESRDRHYEKRRSELDDGHKRRERHDTHYERRRSEMDDESKRRESRDNH 300

Query: 301 HSHRNYDGKQKSDRNKDSDRIQRGYENSKHSEYESKHTGLPPRQ---DYHESKHGLPPMQ 360
           +  R  D   +S R +  D+      +    EY+ + +    R+   D    +    P +
Sbjct: 301 YERRRSDLDDESKRRESHDKHFERQRSDLDDEYKRRESQDKRRRSDIDDEPKRRDARPNE 360

Query: 361 DYHESKHTGLPPRQD-----YHESKHTAL-----PPRQESHRRRGRAPQLSEEERAARLR 420
            Y      G   R++       + K  A       P +  +RRR    +LSEEERAARL+
Sbjct: 361 KYRNRSPKGGVERENLKSYGQEDKKRKAEDLDSGKPNEYQNRRRKGGSKLSEEERAARLK 420

Query: 421 EMQMDAETHEEQRWKRLKKADENDAREASQAGNSRGGKSFLDSVQKSVYGAEKGGSSTIE 480
           +MQMDAE HEEQRW RLKKADE DA EA +   S  GKSFLD   KSVYG EKGGSSTIE
Sbjct: 421 QMQMDAEVHEEQRWTRLKKADETDAVEADKNKVST-GKSFLDDANKSVYGVEKGGSSTIE 480

Query: 481 ESVRRRSHFLQGRSSADEGNAFRR 485
           ESVRRRS++ Q R +A EGNAFRR
Sbjct: 481 ESVRRRSYYSQ-RGTAAEGNAFRR 493
[Close]
BLAST of Spo12873.1 vs. TAIR (Arabidopsis)
Match: AT2G44195.1 (CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor)

HSP 1 Score: 137.9 bits (346), Expect = 1.700e-32
Identity = 85/158 (53.80%), Postives = 101/158 (63.92%), Query Frame = 1 

		  

Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKNEAEQRKLEELRKQIIEERERDEFRVLQEQAG 60
           MALKFLNKKGWHTGS+RN+E VWKAEQK+EAEQ K+E          ER EFR +QEQAG
Sbjct: 1   MALKFLNKKGWHTGSIRNVEKVWKAEQKHEAEQEKIE----------ERSEFRAIQEQAG 60

Query: 61  LTPRQ-ERLEFLYDSGLAVGKPSSDGFQALGSFPSADNSASASASAPVLASAPAPSSEAQ 120
           L PR+ ERLEFLYD  LAV K +    +    F + D  A A+                 
Sbjct: 61  LVPRRPERLEFLYDPELAVAKQNVSSSRHGVLFQNQDQRARAT----------------- 120

Query: 121 PAVPGALF--EEKPQSANDAWRKLHSDPLLMIRQREQE 156
             +PGALF  ++K  SAND+WRK HSDPLL+IRQ+EQE
Sbjct: 121 --IPGALFDDDDKRHSANDSWRKFHSDPLLLIRQKEQE 129
The following BLAST results are available for this feature:
BLAST of Spo12873.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902235435|gb|KNA23905.1|2.3e-249100.hypothetical protein SOVF_0194... [more]
gi|731363636|ref|XP_010693532.1|1.5e-14769.4PREDICTED: pre-mRNA-splicing f... [more]
gi|720052827|ref|XP_010272534.1|1.2e-9353.9PREDICTED: pre-mRNA-splicing f... [more]
gi|1021508577|ref|XP_016197641.1|6.1e-9353.0PREDICTED: pre-mRNA-splicing f... [more]
gi|747095900|ref|XP_011095849.1|7.9e-9352.3PREDICTED: pre-mRNA-splicing f... [more]
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BLAST of Spo12873.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RWJ3_SPIOL1.6e-249100.Uncharacterized protein OS=Spi... [more]
A0A0J8BCL9_BETVU1.0e-14769.4Uncharacterized protein OS=Bet... [more]
A0A151T6B0_CAJCA1.3e-8951.5Pre-mRNA-splicing factor cwc25... [more]
A0A103XTQ7_CYNCS2.2e-8950.4CBF1-interacting co-repressor ... [more]
K4BAV0_SOLLC1.8e-8850.9Uncharacterized protein OS=Sol... [more]
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BLAST of Spo12873.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo12873.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G44200.12.7e-8348.8CBF1-interacting co-repressor ... [more]
AT2G44195.11.7e-3253.8CBF1-interacting co-repressor ... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019339CBF1-interacting co-repressor CIR, N-terminal domainPFAMPF10197Cir_Ncoord: 11..46
score: 2.0
IPR019339CBF1-interacting co-repressor CIR, N-terminal domainSMARTSM01083Cir_N_3coord: 10..46
score: 5.9
IPR022209Pre-mRNA splicing factorPFAMPF12542CWC25coord: 64..164
score: 4.0
NoneNo IPR availableunknownCoilCoilcoord: 22..49
scor
NoneNo IPR availablePANTHERPTHR16196CELL CYCLE CONTROL PROTEIN CWF25coord: 2..484
score: 2.1E
NoneNo IPR availablePANTHERPTHR16196:SF0PRE-MRNA-SPLICING FACTOR CWC25 HOMOLOGcoord: 2..484
score: 2.1E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0031048 chromatin silencing by small RNA
biological_process GO:0000338 protein deneddylation
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0010638 positive regulation of organelle organization
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0043687 post-translational protein modification
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0030422 production of siRNA involved in RNA interference
biological_process GO:0016579 protein deubiquitination
biological_process GO:0009910 negative regulation of flower development
biological_process GO:0016567 protein ubiquitination
biological_process GO:0007131 reciprocal meiotic recombination
biological_process GO:0033044 regulation of chromosome organization
biological_process GO:0010090 trichome morphogenesis
biological_process GO:0009987 cellular process
biological_process GO:0050789 regulation of biological process
biological_process GO:0009640 photomorphogenesis
biological_process GO:0008284 positive regulation of cell proliferation
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0006346 methylation-dependent chromatin silencing
biological_process GO:0016572 histone phosphorylation
biological_process GO:0051567 histone H3-K9 methylation
biological_process GO:0006306 DNA methylation
biological_process GO:0009630 gravitropism
biological_process GO:0045132 meiotic chromosome segregation
biological_process GO:0008152 metabolic process
biological_process GO:0006312 mitotic recombination
biological_process GO:0007062 sister chromatid cohesion
cellular_component GO:0016020 membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
molecular_function GO:0005488 binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0003676 nucleic acid binding
RNA-Seq Expression