Spo12871 (gene)

Overview
NameSpo12871
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUbiquitin carboxyl-terminal hydrolase family protein
Locationchr3 : 2044345 .. 2045724 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTATTTCAACAACATTCGGACAACCTTCAATCACATCCAAACCCTAAAAAATGCGCTTAATTTCACAAGACCCATGTCCCAAAAATCAACTTCAATCCCCAAAAACCAGGAAAGAATGCGAGACCATGCTTTTGATAATTACATGGAAATCGAGAAAAAGATGAGAAAAATCCTCAAATTCCAGGAATTAATCATCGATCAACCCCACCAATCCATCCCAGTTGCGCGCCTCGACTTCCTTGCTCGACGTATTGGGTTCAAAAGAGACGAAGCAGGCAAGTTTGTTCTTAAATTACCTAAAGTTTTTGAAATTTATGAGCACCCAGTTCAAAGAATACTTTATTTGCGATTTACTAGGAATGCCCTTTTGCAAATTGAACAAGAAAAACATGCTATTGATTCCCAATTACCTGATGCTGTTACCCGGCTTAGAAAGCTTTTGATGTTGTCGAATTCGGGTAGGCTTTATCTTGAACATGTTAGGATTGCCCGTAGAGATTTCGGGTTTCCGGATGATTTTGAGTACTCTGTTGTGCTTAAGTATCCCCAGTATTTTAGGTTGTTTGATGCTGAAGATTGTATGAATAAGTACATTGAGATTGTAGAGAAAGAGCCGAGGTTAGCTGTTTGTGCTGTTGATAGAGTTAGGGAAATTGAATACAGGAAGAAGGGTGTTAGTGAAGAAGATATGAGGTTTTCATTTGTTGTGAATTTCCCACCTGGGTTTAAGATTGGTAAGTATTACAAGATTGCAATGTGGAAGTGGCAAAGGATGCCGTATTGGTCGCCGTATGAGGATGTTTCGGGGCATGATTTGAGGTCAATGGAGGCTCAGAATAGGATGGAGAAACGAGCCGTGGCGATGATTCATGAATTGTTGTCATTGACTGTTGAGAAGAAGATTACATTAGAGAGGATCGCGCATTTTAGGGTTCCCATGGATTTGCCTAAGAAACTTAAGGATTTCCTTCTACAACATCAGGGGATGTTTTACATTTCCACTAGGGGGAATCAGGGAAAGCTTCATACTATTTTTTTGAGGGAGGCTTATAGAAAGGGGGACATGATAGAGCCGAATGATGTTTACTTGGCTCGAAGAAGATTGGCTGAATTGATCCTGGTGAGTCCCAGAAAGGAACCTTTGGGGAGAGAGTTGGTTAGTTATACAAGGCATAGGGATGATGCAAGTTATACAAGACGTAGGGATAATGTAACTAGGAGTGATAAAGAGCAAATGAATGACAGTGAAAATTTAAGGGGAGGTAGAGTGGGAGGGCAAGATTTGGGCTCAGAGTCAGACAGTGATGGTGAATCAGGTTACAGTGATGAGGATGAGGATGGCCGCCATGTTAGGGACACACGAGCTGCTCGTTGA

mRNA sequence

ATGAACTATTTCAACAACATTCGGACAACCTTCAATCACATCCAAACCCTAAAAAATGCGCTTAATTTCACAAGACCCATGTCCCAAAAATCAACTTCAATCCCCAAAAACCAGGAAAGAATGCGAGACCATGCTTTTGATAATTACATGGAAATCGAGAAAAAGATGAGAAAAATCCTCAAATTCCAGGAATTAATCATCGATCAACCCCACCAATCCATCCCAGTTGCGCGCCTCGACTTCCTTGCTCGACGTATTGGGTTCAAAAGAGACGAAGCAGGCAAGTTTGTTCTTAAATTACCTAAAGTTTTTGAAATTTATGAGCACCCAGTTCAAAGAATACTTTATTTGCGATTTACTAGGAATGCCCTTTTGCAAATTGAACAAGAAAAACATGCTATTGATTCCCAATTACCTGATGCTGTTACCCGGCTTAGAAAGCTTTTGATGTTGTCGAATTCGGGTAGGCTTTATCTTGAACATGTTAGGATTGCCCGTAGAGATTTCGGGTTTCCGGATGATTTTGAGTACTCTGTTGTGCTTAAGTATCCCCAGTATTTTAGGTTGTTTGATGCTGAAGATTGTATGAATAAGTACATTGAGATTGTAGAGAAAGAGCCGAGGTTAGCTGTTTGTGCTGTTGATAGAGTTAGGGAAATTGAATACAGGAAGAAGGGTGTTAGTGAAGAAGATATGAGGTTTTCATTTGTTGTGAATTTCCCACCTGGGTTTAAGATTGGTAAGTATTACAAGATTGCAATGTGGAAGTGGCAAAGGATGCCGTATTGGTCGCCGTATGAGGATGTTTCGGGGCATGATTTGAGGTCAATGGAGGCTCAGAATAGGATGGAGAAACGAGCCGTGGCGATGATTCATGAATTGTTGTCATTGACTGTTGAGAAGAAGATTACATTAGAGAGGATCGCGCATTTTAGGGTTCCCATGGATTTGCCTAAGAAACTTAAGGATTTCCTTCTACAACATCAGGGGATGTTTTACATTTCCACTAGGGGGAATCAGGGAAAGCTTCATACTATTTTTTTGAGGGAGGCTTATAGAAAGGGGGACATGATAGAGCCGAATGATGTTTACTTGGCTCGAAGAAGATTGGCTGAATTGATCCTGGTGAGTCCCAGAAAGGAACCTTTGGGGAGAGAGTTGGTTAGTTATACAAGGCATAGGGATGATGCAAGTTATACAAGACGTAGGGATAATGTAACTAGGAGTGATAAAGAGCAAATGAATGACAGTGAAAATTTAAGGGGAGGTAGAGTGGGAGGGCAAGATTTGGGCTCAGAGTCAGACAGTGATGGTGAATCAGGTTACAGTGATGAGGATGAGGATGGCCGCCATGTTAGGGACACACGAGCTGCTCGTTGA

Coding sequence (CDS)

ATGAACTATTTCAACAACATTCGGACAACCTTCAATCACATCCAAACCCTAAAAAATGCGCTTAATTTCACAAGACCCATGTCCCAAAAATCAACTTCAATCCCCAAAAACCAGGAAAGAATGCGAGACCATGCTTTTGATAATTACATGGAAATCGAGAAAAAGATGAGAAAAATCCTCAAATTCCAGGAATTAATCATCGATCAACCCCACCAATCCATCCCAGTTGCGCGCCTCGACTTCCTTGCTCGACGTATTGGGTTCAAAAGAGACGAAGCAGGCAAGTTTGTTCTTAAATTACCTAAAGTTTTTGAAATTTATGAGCACCCAGTTCAAAGAATACTTTATTTGCGATTTACTAGGAATGCCCTTTTGCAAATTGAACAAGAAAAACATGCTATTGATTCCCAATTACCTGATGCTGTTACCCGGCTTAGAAAGCTTTTGATGTTGTCGAATTCGGGTAGGCTTTATCTTGAACATGTTAGGATTGCCCGTAGAGATTTCGGGTTTCCGGATGATTTTGAGTACTCTGTTGTGCTTAAGTATCCCCAGTATTTTAGGTTGTTTGATGCTGAAGATTGTATGAATAAGTACATTGAGATTGTAGAGAAAGAGCCGAGGTTAGCTGTTTGTGCTGTTGATAGAGTTAGGGAAATTGAATACAGGAAGAAGGGTGTTAGTGAAGAAGATATGAGGTTTTCATTTGTTGTGAATTTCCCACCTGGGTTTAAGATTGGTAAGTATTACAAGATTGCAATGTGGAAGTGGCAAAGGATGCCGTATTGGTCGCCGTATGAGGATGTTTCGGGGCATGATTTGAGGTCAATGGAGGCTCAGAATAGGATGGAGAAACGAGCCGTGGCGATGATTCATGAATTGTTGTCATTGACTGTTGAGAAGAAGATTACATTAGAGAGGATCGCGCATTTTAGGGTTCCCATGGATTTGCCTAAGAAACTTAAGGATTTCCTTCTACAACATCAGGGGATGTTTTACATTTCCACTAGGGGGAATCAGGGAAAGCTTCATACTATTTTTTTGAGGGAGGCTTATAGAAAGGGGGACATGATAGAGCCGAATGATGTTTACTTGGCTCGAAGAAGATTGGCTGAATTGATCCTGGTGAGTCCCAGAAAGGAACCTTTGGGGAGAGAGTTGGTTAGTTATACAAGGCATAGGGATGATGCAAGTTATACAAGACGTAGGGATAATGTAACTAGGAGTGATAAAGAGCAAATGAATGACAGTGAAAATTTAAGGGGAGGTAGAGTGGGAGGGCAAGATTTGGGCTCAGAGTCAGACAGTGATGGTGAATCAGGTTACAGTGATGAGGATGAGGATGGCCGCCATGTTAGGGACACACGAGCTGCTCGTTGA

Protein sequence

MNYFNNIRTTFNHIQTLKNALNFTRPMSQKSTSIPKNQERMRDHAFDNYMEIEKKMRKILKFQELIIDQPHQSIPVARLDFLARRIGFKRDEAGKFVLKLPKVFEIYEHPVQRILYLRFTRNALLQIEQEKHAIDSQLPDAVTRLRKLLMLSNSGRLYLEHVRIARRDFGFPDDFEYSVVLKYPQYFRLFDAEDCMNKYIEIVEKEPRLAVCAVDRVREIEYRKKGVSEEDMRFSFVVNFPPGFKIGKYYKIAMWKWQRMPYWSPYEDVSGHDLRSMEAQNRMEKRAVAMIHELLSLTVEKKITLERIAHFRVPMDLPKKLKDFLLQHQGMFYISTRGNQGKLHTIFLREAYRKGDMIEPNDVYLARRRLAELILVSPRKEPLGRELVSYTRHRDDASYTRRRDNVTRSDKEQMNDSENLRGGRVGGQDLGSESDSDGESGYSDEDEDGRHVRDTRAAR
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo12871.1Spo12871.1mRNA


Homology
BLAST of Spo12871.1 vs. NCBI nr
Match: gi|902212790|gb|KNA17088.1| (hypothetical protein SOVF_083270 [Spinacia oleracea])

HSP 1 Score: 828.2 bits (2138), Expect = 7.200e-237
Identity = 418/419 (99.76%), Postives = 418/419 (99.76%), Query Frame = 1

		  

Query: 41  MRDHAFDNYMEIEKKMRKILKFQELIIDQPHQSIPVARLDFLARRIGFKRDEAGKFVLKL 100
           MRDHAFDNYMEIEKKMRKILKFQELIIDQPHQSIPVARLDFLARRIGFKRDEAGKFVLKL
Sbjct: 1   MRDHAFDNYMEIEKKMRKILKFQELIIDQPHQSIPVARLDFLARRIGFKRDEAGKFVLKL 60

Query: 101 PKVFEIYEHPVQRILYLRFTRNALLQIEQEKHAIDSQLPDAVTRLRKLLMLSNSGRLYLE 160
           PKVFEIYEHPVQRILYLRFTRNALLQIEQEKHAIDSQLPDAVTRLRKLLMLSNSGRLYLE
Sbjct: 61  PKVFEIYEHPVQRILYLRFTRNALLQIEQEKHAIDSQLPDAVTRLRKLLMLSNSGRLYLE 120

Query: 161 HVRIARRDFGFPDDFEYSVVLKYPQYFRLFDAEDCMNKYIEIVEKEPRLAVCAVDRVREI 220
           HVRIARRDFGFPDDFEYSVVLKYPQYFRLFDAEDCMNKYIEIVEKEPRLAVCAVDRVREI
Sbjct: 121 HVRIARRDFGFPDDFEYSVVLKYPQYFRLFDAEDCMNKYIEIVEKEPRLAVCAVDRVREI 180

Query: 221 EYRKKGVSEEDMRFSFVVNFPPGFKIGKYYKIAMWKWQRMPYWSPYEDVSGHDLRSMEAQ 280
           EYRKKGVSEEDMRFSFVVNFPPGFKIGKYYKIAMWKWQRMPYWSPYEDVSGHDLRSMEAQ
Sbjct: 181 EYRKKGVSEEDMRFSFVVNFPPGFKIGKYYKIAMWKWQRMPYWSPYEDVSGHDLRSMEAQ 240

Query: 281 NRMEKRAVAMIHELLSLTVEKKITLERIAHFRVPMDLPKKLKDFLLQHQGMFYISTRGNQ 340
           NRMEKRAVAMIHELLSLTVEKKITLERIAHFRVPMDLPKKLKDFLLQHQGMFYISTRGNQ
Sbjct: 241 NRMEKRAVAMIHELLSLTVEKKITLERIAHFRVPMDLPKKLKDFLLQHQGMFYISTRGNQ 300

Query: 341 GKLHTIFLREAYRKGDMIEPNDVYLARRRLAELILVSPRKEPLGRELVSYTRHRDDASYT 400
           G LHTIFLREAYRKGDMIEPNDVYLARRRLAELILVSPRKEPLGRELVSYTRHRDDASYT
Sbjct: 301 GTLHTIFLREAYRKGDMIEPNDVYLARRRLAELILVSPRKEPLGRELVSYTRHRDDASYT 360

Query: 401 RRRDNVTRSDKEQMNDSENLRGGRVGGQDLGSESDSDGESGYSDEDEDGRHVRDTRAAR 460
           RRRDNVTRSDKEQMNDSENLRGGRVGGQDLGSESDSDGESGYSDEDEDGRHVRDTRAAR
Sbjct: 361 RRRDNVTRSDKEQMNDSENLRGGRVGGQDLGSESDSDGESGYSDEDEDGRHVRDTRAAR 419

BLAST of Spo12871.1 vs. NCBI nr
Match: gi|731363511|ref|XP_010693472.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 701.8 bits (1810), Expect = 7.800e-199
Identity = 353/445 (79.33%), Postives = 401/445 (90.11%), Query Frame = 1

		  

Query: 15  QTLKNALNFTRPMSQKSTSIPKNQERMRDHAFDNYMEIEKKMRKILKFQELIIDQPHQSI 74
           ++L+NAL F+RPMS+KSTSIPKNQ+R+RDH FDNYME+EKKMRK++KFQELI  QP Q +
Sbjct: 32  KSLENALIFSRPMSKKSTSIPKNQQRIRDHGFDNYMEVEKKMRKVIKFQELIFSQPQQCV 91

Query: 75  PVARLDFLARRIGFKRDEAGKFVLKLPKVFEIYEHPVQRILYLRFTRNALLQIEQEKHAI 134
           PV+RLDFLARR GFKRDEAGKFVLKLP++FEIYEHPVQRILYLRFTRNALLQI+QEKH++
Sbjct: 92  PVSRLDFLARRTGFKRDEAGKFVLKLPEIFEIYEHPVQRILYLRFTRNALLQIDQEKHSL 151

Query: 135 DSQLPDAVTRLRKLLMLSNSGRLYLEHVRIARRDFGFPDDFEYSVVLKYPQYFRLFDAED 194
           ++Q+PDAVTRLRKLLMLSN+GRL+LEH+RIARRDFG PDDFEYSVVLKYPQYFRLFDA+D
Sbjct: 152 NAQIPDAVTRLRKLLMLSNTGRLHLEHIRIARRDFGLPDDFEYSVVLKYPQYFRLFDAKD 211

Query: 195 CMNKYIEIVEKEPRLAVCAVDRVREIEYRKKGVSEEDMRFSFVVNFPPGFKIGKYYKIAM 254
            M+KYIE+VEK+PRL VCAVD+VREIEYRKKG+ EE+ RFSFVVNFPPGFKIGKY+KIAM
Sbjct: 212 SMSKYIELVEKDPRLTVCAVDKVREIEYRKKGIDEENTRFSFVVNFPPGFKIGKYFKIAM 271

Query: 255 WKWQRMPYWSPYEDVSGHDLRSMEAQNRMEKRAVAMIHELLSLTVEKKITLERIAHFRVP 314
           WKWQR+PYWSPYEDVSGHD+RS EAQ+RMEKRAVAMIHELLSLTVEK+ITLERIA  RV 
Sbjct: 272 WKWQRLPYWSPYEDVSGHDMRSFEAQSRMEKRAVAMIHELLSLTVEKRITLERIARLRVN 331

Query: 315 MDLPKKLKDFLLQHQGMFYISTRGNQGKLHTIFLREAYRKGDMIEPNDVYLARRRLAELI 374
           MDLPKKLKDFLLQ+QG+FYISTRGNQGKLHTIFLREAY+KG++IEPNDVYLARR+LAELI
Sbjct: 332 MDLPKKLKDFLLQYQGIFYISTRGNQGKLHTIFLREAYKKGELIEPNDVYLARRKLAELI 391

Query: 375 LVSPRKEPLGRELVSYTRHRDDASYTRRRDNVTRSDKEQMNDSENLRGGRVGGQDLGSES 434
           LVSPRK  LGRELVSYTRH DD         V  S +EQ +DS +LRG RVGGQDL  +S
Sbjct: 392 LVSPRKASLGRELVSYTRHCDD---------VRGSHREQTSDSGDLRGDRVGGQDL--DS 451

Query: 435 DSDGESGYSDEDEDGRHVRDTRAAR 460
           DS+ ES  +DED+D R V  TRA R
Sbjct: 452 DSEVESNSNDEDDDARPVSHTRARR 465

BLAST of Spo12871.1 vs. NCBI nr
Match: gi|870846464|gb|KMS99025.1| (hypothetical protein BVRB_3g066310 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 688.3 bits (1775), Expect = 8.900e-195
Identity = 346/433 (79.91%), Postives = 390/433 (90.07%), Query Frame = 1

		  

Query: 27  MSQKSTSIPKNQERMRDHAFDNYMEIEKKMRKILKFQELIIDQPHQSIPVARLDFLARRI 86
           MS+KSTSIPKNQ+R+RDH FDNYME+EKKMRK++KFQELI  QP Q +PV+RLDFLARR 
Sbjct: 1   MSKKSTSIPKNQQRIRDHGFDNYMEVEKKMRKVIKFQELIFSQPQQCVPVSRLDFLARRT 60

Query: 87  GFKRDEAGKFVLKLPKVFEIYEHPVQRILYLRFTRNALLQIEQEKHAIDSQLPDAVTRLR 146
           GFKRDEAGKFVLKLP++FEIYEHPVQRILYLRFTRNALLQI+QEKH++++Q+PDAVTRLR
Sbjct: 61  GFKRDEAGKFVLKLPEIFEIYEHPVQRILYLRFTRNALLQIDQEKHSLNAQIPDAVTRLR 120

Query: 147 KLLMLSNSGRLYLEHVRIARRDFGFPDDFEYSVVLKYPQYFRLFDAEDCMNKYIEIVEKE 206
           KLLMLSN+GRL+LEH+RIARRDFG PDDFEYSVVLKYPQYFRLFDA+D M+KYIE+VEK+
Sbjct: 121 KLLMLSNTGRLHLEHIRIARRDFGLPDDFEYSVVLKYPQYFRLFDAKDSMSKYIELVEKD 180

Query: 207 PRLAVCAVDRVREIEYRKKGVSEEDMRFSFVVNFPPGFKIGKYYKIAMWKWQRMPYWSPY 266
           PRL VCAVD+VREIEYRKKG+ EE+ RFSFVVNFPPGFKIGKY+KIAMWKWQR+PYWSPY
Sbjct: 181 PRLTVCAVDKVREIEYRKKGIDEENTRFSFVVNFPPGFKIGKYFKIAMWKWQRLPYWSPY 240

Query: 267 EDVSGHDLRSMEAQNRMEKRAVAMIHELLSLTVEKKITLERIAHFRVPMDLPKKLKDFLL 326
           EDVSGHD+RS EAQ+RMEKRAVAMIHELLSLTVEK+ITLERIA  RV MDLPKKLKDFLL
Sbjct: 241 EDVSGHDMRSFEAQSRMEKRAVAMIHELLSLTVEKRITLERIARLRVNMDLPKKLKDFLL 300

Query: 327 QHQGMFYISTRGNQGKLHTIFLREAYRKGDMIEPNDVYLARRRLAELILVSPRKEPLGRE 386
           Q+QG+FYISTRGNQGKLHTIFLREAY+KG++IEPNDVYLARR+LAELILVSPRK  LGRE
Sbjct: 301 QYQGIFYISTRGNQGKLHTIFLREAYKKGELIEPNDVYLARRKLAELILVSPRKASLGRE 360

Query: 387 LVSYTRHRDDASYTRRRDNVTRSDKEQMNDSENLRGGRVGGQDLGSESDSDGESGYSDED 446
           LVSYTRH DD         V  S +EQ +DS +LRG RVGGQDL  +SDS+ ES  +DED
Sbjct: 361 LVSYTRHCDD---------VRGSHREQTSDSGDLRGDRVGGQDL--DSDSEVESNSNDED 420

Query: 447 EDGRHVRDTRAAR 460
           +D R V  TRA R
Sbjct: 421 DDARPVSHTRARR 422

BLAST of Spo12871.1 vs. NCBI nr
Match: gi|359490387|ref|XP_002274057.2| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Vitis vinifera])

HSP 1 Score: 594.3 bits (1531), Expect = 1.800e-166
Identity = 296/433 (68.36%), Postives = 358/433 (82.68%), Query Frame = 1

		  

Query: 14  IQTLKNALNFTRPMSQKSTSIPKNQERMRDHAFDNYMEIEKKMRKILKFQELIIDQPHQS 73
           +  L  +L +TRPMSQ STSIPK  +R+RDH +DNYME+EKK+RKILKFQ+L + QPHQ+
Sbjct: 15  VSFLIRSLTWTRPMSQ-STSIPKKLQRVRDHGYDNYMEVEKKLRKILKFQDLFLCQPHQT 74

Query: 74  IPVARLDFLARRIGFKRDEAGKFVLKLPKVFEIYEHPVQRILYLRFTRNALLQIEQEKHA 133
           +PV+RLD LARR+ FK+ EAG F+LK P VFEIYEHPV+RILY R TR A LQIEQE  A
Sbjct: 75  LPVSRLDTLARRLDFKQHEAGAFILKFPHVFEIYEHPVRRILYCRLTRKAHLQIEQENRA 134

Query: 134 IDSQLPDAVTRLRKLLMLSNSGRLYLEHVRIARRDFGFPDDFEYSVVLKYPQYFRLFDAE 193
           ++ Q+PDAVTRLRKLLM+SN+GRL LEH+RIARR+ G PDDFEYSV+LK PQ+FRLFDA+
Sbjct: 135 LNDQIPDAVTRLRKLLMMSNTGRLRLEHIRIARRELGLPDDFEYSVILKNPQFFRLFDAK 194

Query: 194 DCMNKYIEIVEKEPRLAVCAVDRVREIEYRKKGVSEEDMRFSFVVNFPPGFKIGKYYKIA 253
           +  NKYIEIVE +P LAVCA++++RE EYR+KG+  ED+RFSF+VNFPPGFKIGKYY+IA
Sbjct: 195 ETRNKYIEIVESDPTLAVCAIEKLREKEYREKGIDAEDIRFSFIVNFPPGFKIGKYYRIA 254

Query: 254 MWKWQRMPYWSPYEDVSGHDLRSMEAQNRMEKRAVAMIHELLSLTVEKKITLERIAHFRV 313
           +WKWQR+PYWSPYEDVSG+DLRS+EAQ RMEKRA+A IHELLSLTVEKKI+LERIAHFR 
Sbjct: 255 VWKWQRIPYWSPYEDVSGYDLRSLEAQKRMEKRAIATIHELLSLTVEKKISLERIAHFRQ 314

Query: 314 PMDLPKKLKDFLLQHQGMFYISTRGNQGKLHTIFLREAYRKGDMIEPNDVYLARRRLAEL 373
            M+LPKKLK+FLLQHQG+FYISTRGN GKLHT+FLREAY+KG++IEPND+YLARR+LAEL
Sbjct: 315 AMNLPKKLKEFLLQHQGIFYISTRGNFGKLHTVFLREAYKKGELIEPNDLYLARRKLAEL 374

Query: 374 ILVSPRKEPLGRELVSYTRHRDDASYTRRRDNVTRSDKEQMNDSENLRGGRVGGQDLGSE 433
           +L+SPRK  + RELV+Y R R+D    R + +   S  E   D  N R     G+D    
Sbjct: 375 VLLSPRKANVDRELVNYRRDREDDEMVRIQSDYVESRFEGFVDENNFRQDGERGRDSDLN 434

Query: 434 SDSDGESGYSDED 447
            DSD  S +SDED
Sbjct: 435 LDSDAGSDFSDED 446

BLAST of Spo12871.1 vs. NCBI nr
Match: gi|645257143|ref|XP_008234277.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Prunus mume])

HSP 1 Score: 590.1 bits (1520), Expect = 3.300e-165
Identity = 304/449 (67.71%), Postives = 365/449 (81.29%), Query Frame = 1

		  

Query: 2   NYFNNIRTTFNHIQTLKNALNFTRPMSQKSTSIPKNQERMRDHAFDNYMEIEKKMRKILK 61
           N+F     T   I  +   L   RPMS +STSIPK QER+RDH +DNYME+EKK RK+LK
Sbjct: 10  NFFKTKSKTLKPITFILLNLTSARPMS-QSTSIPKKQERVRDHGYDNYMEVEKKTRKVLK 69

Query: 62  FQELIIDQPHQSIPVARLDFLARRIGFKRDEAGKFVLKLPKVFEIYEHPVQRILYLRFTR 121
           FQ+LI+ QP+Q I ++RLD LARR+GFK++EAG FVLK P VFEIYEHPVQRILY R TR
Sbjct: 70  FQDLILSQPNQVIQISRLDLLARRLGFKQNEAGAFVLKFPHVFEIYEHPVQRILYCRLTR 129

Query: 122 NALLQIEQEKHAIDSQLPDAVTRLRKLLMLSNSGRLYLEHVRIARRDFGFPDDFEYSVVL 181
            A LQIEQEK A+  Q+PDAVT LRKLLM+SN+GRL LEHVRIAR +FG PDDFEYSV++
Sbjct: 130 KAHLQIEQEKKALIEQIPDAVTCLRKLLMMSNTGRLRLEHVRIARAEFGLPDDFEYSVII 189

Query: 182 KYPQYFRLFDAEDCMNKYIEIVEKEPRLAVCAVDRVREIEYRKKGVSEEDMRFSFVVNFP 241
           K+PQYFRLFDA++  NKYIE+VEK+P L+VCA++++REIEYR+KG+  ED+RFSF+VNFP
Sbjct: 190 KHPQYFRLFDAQETRNKYIEVVEKDPSLSVCAIEKLREIEYREKGIDAEDIRFSFIVNFP 249

Query: 242 PGFKIGKYYKIAMWKWQRMPYWSPYEDVSGHDLRSMEAQNRMEKRAVAMIHELLSLTVEK 301
           PGFKIGKYY+IA+WKWQR+PYWSPYEDVSG+DLRS+EAQ RMEKRAVA+IHELLSLTVEK
Sbjct: 250 PGFKIGKYYRIAVWKWQRVPYWSPYEDVSGYDLRSLEAQKRMEKRAVAVIHELLSLTVEK 309

Query: 302 KITLERIAHFRVPMDLPKKLKDFLLQHQGMFYISTRGNQGKLHTIFLREAYRKGDMIEPN 361
           KITLERIAHFR+ M+LP KLK+FLLQHQG+FYISTRGN GKLHT+FLREAY+KG++IEPN
Sbjct: 310 KITLERIAHFRMAMNLPNKLKEFLLQHQGIFYISTRGNHGKLHTVFLREAYKKGELIEPN 369

Query: 362 DVYLARRRLAELILVSPRKEPLGRELVSYTRH-RDDASYTRRRDNVTRSDKEQMNDSENL 421
           D+YLARR+LAEL+L+SPRK  + RELVSY R   DD     RRD+V        N  E+ 
Sbjct: 370 DLYLARRKLAELVLISPRKAKVDRELVSYHRDWEDDERGHIRRDHVE-------NSFEDF 429

Query: 422 RGG-RVGGQDLGSESDSDGESGYSDEDED 449
            GG  VG +D G + D + + G  D D D
Sbjct: 430 GGGSTVGQEDRGVDDDMNSDMG-GDYDSD 449

BLAST of Spo12871.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RC56_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_083270 PE=4 SV=1)

HSP 1 Score: 828.2 bits (2138), Expect = 5.000e-237
Identity = 418/419 (99.76%), Postives = 418/419 (99.76%), Query Frame = 1

		  

Query: 41  MRDHAFDNYMEIEKKMRKILKFQELIIDQPHQSIPVARLDFLARRIGFKRDEAGKFVLKL 100
           MRDHAFDNYMEIEKKMRKILKFQELIIDQPHQSIPVARLDFLARRIGFKRDEAGKFVLKL
Sbjct: 1   MRDHAFDNYMEIEKKMRKILKFQELIIDQPHQSIPVARLDFLARRIGFKRDEAGKFVLKL 60

Query: 101 PKVFEIYEHPVQRILYLRFTRNALLQIEQEKHAIDSQLPDAVTRLRKLLMLSNSGRLYLE 160
           PKVFEIYEHPVQRILYLRFTRNALLQIEQEKHAIDSQLPDAVTRLRKLLMLSNSGRLYLE
Sbjct: 61  PKVFEIYEHPVQRILYLRFTRNALLQIEQEKHAIDSQLPDAVTRLRKLLMLSNSGRLYLE 120

Query: 161 HVRIARRDFGFPDDFEYSVVLKYPQYFRLFDAEDCMNKYIEIVEKEPRLAVCAVDRVREI 220
           HVRIARRDFGFPDDFEYSVVLKYPQYFRLFDAEDCMNKYIEIVEKEPRLAVCAVDRVREI
Sbjct: 121 HVRIARRDFGFPDDFEYSVVLKYPQYFRLFDAEDCMNKYIEIVEKEPRLAVCAVDRVREI 180

Query: 221 EYRKKGVSEEDMRFSFVVNFPPGFKIGKYYKIAMWKWQRMPYWSPYEDVSGHDLRSMEAQ 280
           EYRKKGVSEEDMRFSFVVNFPPGFKIGKYYKIAMWKWQRMPYWSPYEDVSGHDLRSMEAQ
Sbjct: 181 EYRKKGVSEEDMRFSFVVNFPPGFKIGKYYKIAMWKWQRMPYWSPYEDVSGHDLRSMEAQ 240

Query: 281 NRMEKRAVAMIHELLSLTVEKKITLERIAHFRVPMDLPKKLKDFLLQHQGMFYISTRGNQ 340
           NRMEKRAVAMIHELLSLTVEKKITLERIAHFRVPMDLPKKLKDFLLQHQGMFYISTRGNQ
Sbjct: 241 NRMEKRAVAMIHELLSLTVEKKITLERIAHFRVPMDLPKKLKDFLLQHQGMFYISTRGNQ 300

Query: 341 GKLHTIFLREAYRKGDMIEPNDVYLARRRLAELILVSPRKEPLGRELVSYTRHRDDASYT 400
           G LHTIFLREAYRKGDMIEPNDVYLARRRLAELILVSPRKEPLGRELVSYTRHRDDASYT
Sbjct: 301 GTLHTIFLREAYRKGDMIEPNDVYLARRRLAELILVSPRKEPLGRELVSYTRHRDDASYT 360

Query: 401 RRRDNVTRSDKEQMNDSENLRGGRVGGQDLGSESDSDGESGYSDEDEDGRHVRDTRAAR 460
           RRRDNVTRSDKEQMNDSENLRGGRVGGQDLGSESDSDGESGYSDEDEDGRHVRDTRAAR
Sbjct: 361 RRRDNVTRSDKEQMNDSENLRGGRVGGQDLGSESDSDGESGYSDEDEDGRHVRDTRAAR 419

BLAST of Spo12871.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E7F0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g066310 PE=4 SV=1)

HSP 1 Score: 688.3 bits (1775), Expect = 6.200e-195
Identity = 346/433 (79.91%), Postives = 390/433 (90.07%), Query Frame = 1

		  

Query: 27  MSQKSTSIPKNQERMRDHAFDNYMEIEKKMRKILKFQELIIDQPHQSIPVARLDFLARRI 86
           MS+KSTSIPKNQ+R+RDH FDNYME+EKKMRK++KFQELI  QP Q +PV+RLDFLARR 
Sbjct: 1   MSKKSTSIPKNQQRIRDHGFDNYMEVEKKMRKVIKFQELIFSQPQQCVPVSRLDFLARRT 60

Query: 87  GFKRDEAGKFVLKLPKVFEIYEHPVQRILYLRFTRNALLQIEQEKHAIDSQLPDAVTRLR 146
           GFKRDEAGKFVLKLP++FEIYEHPVQRILYLRFTRNALLQI+QEKH++++Q+PDAVTRLR
Sbjct: 61  GFKRDEAGKFVLKLPEIFEIYEHPVQRILYLRFTRNALLQIDQEKHSLNAQIPDAVTRLR 120

Query: 147 KLLMLSNSGRLYLEHVRIARRDFGFPDDFEYSVVLKYPQYFRLFDAEDCMNKYIEIVEKE 206
           KLLMLSN+GRL+LEH+RIARRDFG PDDFEYSVVLKYPQYFRLFDA+D M+KYIE+VEK+
Sbjct: 121 KLLMLSNTGRLHLEHIRIARRDFGLPDDFEYSVVLKYPQYFRLFDAKDSMSKYIELVEKD 180

Query: 207 PRLAVCAVDRVREIEYRKKGVSEEDMRFSFVVNFPPGFKIGKYYKIAMWKWQRMPYWSPY 266
           PRL VCAVD+VREIEYRKKG+ EE+ RFSFVVNFPPGFKIGKY+KIAMWKWQR+PYWSPY
Sbjct: 181 PRLTVCAVDKVREIEYRKKGIDEENTRFSFVVNFPPGFKIGKYFKIAMWKWQRLPYWSPY 240

Query: 267 EDVSGHDLRSMEAQNRMEKRAVAMIHELLSLTVEKKITLERIAHFRVPMDLPKKLKDFLL 326
           EDVSGHD+RS EAQ+RMEKRAVAMIHELLSLTVEK+ITLERIA  RV MDLPKKLKDFLL
Sbjct: 241 EDVSGHDMRSFEAQSRMEKRAVAMIHELLSLTVEKRITLERIARLRVNMDLPKKLKDFLL 300

Query: 327 QHQGMFYISTRGNQGKLHTIFLREAYRKGDMIEPNDVYLARRRLAELILVSPRKEPLGRE 386
           Q+QG+FYISTRGNQGKLHTIFLREAY+KG++IEPNDVYLARR+LAELILVSPRK  LGRE
Sbjct: 301 QYQGIFYISTRGNQGKLHTIFLREAYKKGELIEPNDVYLARRKLAELILVSPRKASLGRE 360

Query: 387 LVSYTRHRDDASYTRRRDNVTRSDKEQMNDSENLRGGRVGGQDLGSESDSDGESGYSDED 446
           LVSYTRH DD         V  S +EQ +DS +LRG RVGGQDL  +SDS+ ES  +DED
Sbjct: 361 LVSYTRHCDD---------VRGSHREQTSDSGDLRGDRVGGQDL--DSDSEVESNSNDED 420

Query: 447 EDGRHVRDTRAAR 460
           +D R V  TRA R
Sbjct: 421 DDARPVSHTRARR 422

BLAST of Spo12871.1 vs. UniProtKB/TrEMBL
Match: F6HP54_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0100g00680 PE=4 SV=1)

HSP 1 Score: 594.3 bits (1531), Expect = 1.200e-166
Identity = 296/433 (68.36%), Postives = 358/433 (82.68%), Query Frame = 1

		  

Query: 14  IQTLKNALNFTRPMSQKSTSIPKNQERMRDHAFDNYMEIEKKMRKILKFQELIIDQPHQS 73
           +  L  +L +TRPMSQ STSIPK  +R+RDH +DNYME+EKK+RKILKFQ+L + QPHQ+
Sbjct: 15  VSFLIRSLTWTRPMSQ-STSIPKKLQRVRDHGYDNYMEVEKKLRKILKFQDLFLCQPHQT 74

Query: 74  IPVARLDFLARRIGFKRDEAGKFVLKLPKVFEIYEHPVQRILYLRFTRNALLQIEQEKHA 133
           +PV+RLD LARR+ FK+ EAG F+LK P VFEIYEHPV+RILY R TR A LQIEQE  A
Sbjct: 75  LPVSRLDTLARRLDFKQHEAGAFILKFPHVFEIYEHPVRRILYCRLTRKAHLQIEQENRA 134

Query: 134 IDSQLPDAVTRLRKLLMLSNSGRLYLEHVRIARRDFGFPDDFEYSVVLKYPQYFRLFDAE 193
           ++ Q+PDAVTRLRKLLM+SN+GRL LEH+RIARR+ G PDDFEYSV+LK PQ+FRLFDA+
Sbjct: 135 LNDQIPDAVTRLRKLLMMSNTGRLRLEHIRIARRELGLPDDFEYSVILKNPQFFRLFDAK 194

Query: 194 DCMNKYIEIVEKEPRLAVCAVDRVREIEYRKKGVSEEDMRFSFVVNFPPGFKIGKYYKIA 253
           +  NKYIEIVE +P LAVCA++++RE EYR+KG+  ED+RFSF+VNFPPGFKIGKYY+IA
Sbjct: 195 ETRNKYIEIVESDPTLAVCAIEKLREKEYREKGIDAEDIRFSFIVNFPPGFKIGKYYRIA 254

Query: 254 MWKWQRMPYWSPYEDVSGHDLRSMEAQNRMEKRAVAMIHELLSLTVEKKITLERIAHFRV 313
           +WKWQR+PYWSPYEDVSG+DLRS+EAQ RMEKRA+A IHELLSLTVEKKI+LERIAHFR 
Sbjct: 255 VWKWQRIPYWSPYEDVSGYDLRSLEAQKRMEKRAIATIHELLSLTVEKKISLERIAHFRQ 314

Query: 314 PMDLPKKLKDFLLQHQGMFYISTRGNQGKLHTIFLREAYRKGDMIEPNDVYLARRRLAEL 373
            M+LPKKLK+FLLQHQG+FYISTRGN GKLHT+FLREAY+KG++IEPND+YLARR+LAEL
Sbjct: 315 AMNLPKKLKEFLLQHQGIFYISTRGNFGKLHTVFLREAYKKGELIEPNDLYLARRKLAEL 374

Query: 374 ILVSPRKEPLGRELVSYTRHRDDASYTRRRDNVTRSDKEQMNDSENLRGGRVGGQDLGSE 433
           +L+SPRK  + RELV+Y R R+D    R + +   S  E   D  N R     G+D    
Sbjct: 375 VLLSPRKANVDRELVNYRRDREDDEMVRIQSDYVESRFEGFVDENNFRQDGERGRDSDLN 434

Query: 434 SDSDGESGYSDED 447
            DSD  S +SDED
Sbjct: 435 LDSDAGSDFSDED 446

BLAST of Spo12871.1 vs. UniProtKB/TrEMBL
Match: A0A061G0P5_THECC (Ubiquitin carboxyl-terminal hydrolase family protein OS=Theobroma cacao GN=TCM_015115 PE=4 SV=1)

HSP 1 Score: 581.3 bits (1497), Expect = 1.100e-162
Identity = 297/444 (66.89%), Postives = 365/444 (82.21%), Query Frame = 1

		  

Query: 22  NFT-RPMSQKSTSIPKNQERMRDHAFDNYMEIEKKMRKILKFQELIIDQPHQSIPVARLD 81
           NFT + +  +STSIPK Q+R+RDH +DNYME+EKK RK+LKFQ LI+ QP+Q++P++R D
Sbjct: 30  NFTSQKLMSQSTSIPKKQQRVRDHGYDNYMEVEKKTRKVLKFQSLILSQPNQTLPISRFD 89

Query: 82  FLARRIG--FKRDEAGKFVLKLPKVFEIYEHPVQRILYLRFTRNALLQIEQEKHAIDSQL 141
            LARR+G  FK++EAG ++LK P VFEIYEHPVQRILY R TR ALLQI+++K A+++Q+
Sbjct: 90  SLARRLGLGFKQNEAGAYLLKFPHVFEIYEHPVQRILYCRLTRKALLQIDRKKEALNAQI 149

Query: 142 PDAVTRLRKLLMLSNSGRLYLEHVRIARRDFGFPDDFEYSVVLKYPQYFRLFDAEDCMNK 201
           PDAVTRLRKLLM+SN+GRL LEHVRIAR++FG PDDFEYSV+L +PQ+FRLFDA +  NK
Sbjct: 150 PDAVTRLRKLLMMSNTGRLRLEHVRIARKEFGLPDDFEYSVILNHPQFFRLFDATETRNK 209

Query: 202 YIEIVEKEPRLAVCAVDRVREIEYRKKGVSEEDMRFSFVVNFPPGFKIGKYYKIAMWKWQ 261
           YIEIVE++P+LAVCA+  VRE EYR+KG   ED+RFSF+VNFPPGFKIGKYY+IA+WKWQ
Sbjct: 210 YIEIVERDPKLAVCAIGTVREREYREKGFDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQ 269

Query: 262 RMPYWSPYEDVSGHDLRSMEAQNRMEKRAVAMIHELLSLTVEKKITLERIAHFRVPMDLP 321
           R+PYWSPYEDVSG+DLRS+EAQ RMEKRAVA IHELLSLTVEKKITLERIAHFR+ M+LP
Sbjct: 270 RVPYWSPYEDVSGYDLRSIEAQKRMEKRAVATIHELLSLTVEKKITLERIAHFRMAMNLP 329

Query: 322 KKLKDFLLQHQGMFYISTRGNQGKLHTIFLREAYRKGDMIEPNDVYLARRRLAELILVSP 381
           KKLKDFLLQHQG+FY+STRGN GKLHT+FLREAYRKG++IEPND+YLARR+L EL+L+SP
Sbjct: 330 KKLKDFLLQHQGIFYVSTRGNYGKLHTVFLREAYRKGELIEPNDLYLARRKLGELVLISP 389

Query: 382 RKEPLGRELVSYTRHRDDASYTRRRDNVTRSDKEQMNDSENLRGGRVG----GQDLGSES 441
           RK  + +ELVS+ R R+     R R +   +D E          G+VG    G+D GS+S
Sbjct: 390 RKAKVDKELVSFKRDREGDEVERVRRDYVENDFEDFGVE-----GKVGQDGEGKD-GSDS 449

Query: 442 D--SDGESGYSDEDEDGRHVRDTR 457
           D  SD E  Y+DEDED     D +
Sbjct: 450 DLVSDIECHYTDEDEDFDETMDQK 467

BLAST of Spo12871.1 vs. UniProtKB/TrEMBL
Match: V4RLQ1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004876mg PE=4 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 4.100e-162
Identity = 295/432 (68.29%), Postives = 356/432 (82.41%), Query Frame = 1

		  

Query: 21  LNFT--RPMSQKSTSIPKNQERMRDHAFDNYMEIEKKMRKILKFQELIIDQPHQSIPVAR 80
           LNFT  + MSQK TSI K Q+R+RDHA+DNYMEIEKKMRK+LKFQ L + Q +Q++PV+R
Sbjct: 30  LNFTSTKHMSQKCTSISKKQQRVRDHAYDNYMEIEKKMRKVLKFQTLFLSQHNQTLPVSR 89

Query: 81  LDFLARRIGFKRDEAGKFVLKLPKVFEIYEHPVQRILYLRFTRNALLQIEQEKHAIDSQL 140
           LDFLARRIGFKR EAG F+LK P VFEIYEHPVQRILY R TR ALLQIEQEK A+++Q+
Sbjct: 90  LDFLARRIGFKRQEAGSFLLKFPHVFEIYEHPVQRILYCRLTRKALLQIEQEKKALNAQI 149

Query: 141 PDAVTRLRKLLMLSNSGRLYLEHVRIARRDFGFPDDFEYSVVLKYPQYFRLFDAEDCMNK 200
           P+AVTRLRKLLM+SNSG L LEHVRIAR +FG P+DFEYSVVLK  Q+FRLF+A++   K
Sbjct: 150 PEAVTRLRKLLMMSNSGCLRLEHVRIARTEFGLPEDFEYSVVLKNAQFFRLFNAKESTEK 209

Query: 201 YIEIVEKEPRLAVCAVDRVREIEYRKKGVSEEDMRFSFVVNFPPGFKIGKYYKIAMWKWQ 260
           YIE+V ++P LAVCA+++VRE EYR++G+  ED+RFSF+VNFPPGFKIGKYY+IA+WKWQ
Sbjct: 210 YIELVGRDPSLAVCAIEKVREKEYRERGIDAEDIRFSFLVNFPPGFKIGKYYRIAVWKWQ 269

Query: 261 RMPYWSPYEDVSGHDLRSMEAQNRMEKRAVAMIHELLSLTVEKKITLERIAHFRVPMDLP 320
           R+PYWSPYEDVSG+DLRS+EAQ RMEKRAVA IHELL+LTVEKKITLERIAHFR+ M+LP
Sbjct: 270 RVPYWSPYEDVSGYDLRSLEAQKRMEKRAVATIHELLTLTVEKKITLERIAHFRLAMNLP 329

Query: 321 KKLKDFLLQHQGMFYISTRGNQGKLHTIFLREAYRKGDMIEPNDVYLARRRLAELILVSP 380
           KKLK+FLLQHQG+FYISTRGN GKLHT+FLREAYRKG+++EPND+YLARR+L EL+L+SP
Sbjct: 330 KKLKEFLLQHQGIFYISTRGNHGKLHTVFLREAYRKGELLEPNDLYLARRKLGELVLMSP 389

Query: 381 RKEPLGRELVSYTRHRDDASYTRRRDNVTRSDK--EQMNDSENLRGGRVGGQDLGSESDS 440
           RK  +  ELV   R R D      R  V  ++   +     EN  G + G  DL S+  S
Sbjct: 390 RKVKMDTELVRNRRDRHDGGGYMGRSTVVHANNGFDNFGVKENAGGDQKGDADLDSDLGS 449

Query: 441 DGESGYSDEDED 449
           + ES  SDE++D
Sbjct: 450 NVESDTSDENDD 461

BLAST of Spo12871.1 vs. ExPASy Swiss-Prot
Match: RPD1_ARATH (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 3.100e-155
Identity = 265/378 (70.11%), Postives = 322/378 (85.19%), Query Frame = 1

		  

Query: 21  LNFTRPMSQKSTSIPKNQERMRDHAFDNYMEIEKKMRKILKFQELIIDQPHQSIPVARLD 80
           L   +P SQ ST+IPK Q+R+RDH +DNYME+EKK+RK++KF  LI+ QP+ +I ++ LD
Sbjct: 28  LILVKPFSQ-STTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLD 87

Query: 81  FLARRIG--FKRDEAGKFVLKLPKVFEIYEHPVQRILYLRFTRNALLQIEQEKHAIDSQL 140
            LARR+G  FK+ E G F+LK P VFEIYEHPVQRILY R TR AL QI  E  A+  Q+
Sbjct: 88  TLARRLGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQI 147

Query: 141 PDAVTRLRKLLMLSNSGRLYLEHVRIARRDFGFPDDFEYSVVLKYPQYFRLFDAEDCMNK 200
           PDAVTRLRKL+M+SN+GR+ LEHVRIAR +FG P+DFEYSV+LK+PQ+FRL D E+  +K
Sbjct: 148 PDAVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDK 207

Query: 201 YIEIVEKEPRLAVCAVDRVREIEYRKKGVSEEDMRFSFVVNFPPGFKIGKYYKIAMWKWQ 260
           YIEIVEK+P L++CA++RVREIEYR KG+  ED+RFSFVVNFPPGFKIGKY++IA+WKWQ
Sbjct: 208 YIEIVEKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQ 267

Query: 261 RMPYWSPYEDVSGHDLRSMEAQNRMEKRAVAMIHELLSLTVEKKITLERIAHFRVPMDLP 320
           R+PYWSPYED+SG+DLRSMEAQNR+EKR+VA IHELLSLTVEKKITLERIAHFR  M+LP
Sbjct: 268 RLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLP 327

Query: 321 KKLKDFLLQHQGMFYISTRGNQGKLHTIFLREAYRKGDMIEPNDVYLARRRLAELILVSP 380
           KKLK+FLLQHQG+FYISTRGN GKLHT+FLRE Y++G+++EPNDVYLARRRLAEL+L+SP
Sbjct: 328 KKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSP 387

Query: 381 RKEPLGRELVSYTRHRDD 397
           RK  +  ELV Y    DD
Sbjct: 388 RKAKVDAELVRYRDGLDD 404

BLAST of Spo12871.1 vs. TAIR (Arabidopsis)
Match: AT4G33495.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 549.7 bits (1415), Expect = 1.700e-156
Identity = 265/378 (70.11%), Postives = 322/378 (85.19%), Query Frame = 1

		  

Query: 21  LNFTRPMSQKSTSIPKNQERMRDHAFDNYMEIEKKMRKILKFQELIIDQPHQSIPVARLD 80
           L   +P SQ ST+IPK Q+R+RDH +DNYME+EKK+RK++KF  LI+ QP+ +I ++ LD
Sbjct: 28  LILVKPFSQ-STTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLD 87

Query: 81  FLARRIG--FKRDEAGKFVLKLPKVFEIYEHPVQRILYLRFTRNALLQIEQEKHAIDSQL 140
            LARR+G  FK+ E G F+LK P VFEIYEHPVQRILY R TR AL QI  E  A+  Q+
Sbjct: 88  TLARRLGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQI 147

Query: 141 PDAVTRLRKLLMLSNSGRLYLEHVRIARRDFGFPDDFEYSVVLKYPQYFRLFDAEDCMNK 200
           PDAVTRLRKL+M+SN+GR+ LEHVRIAR +FG P+DFEYSV+LK+PQ+FRL D E+  +K
Sbjct: 148 PDAVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDK 207

Query: 201 YIEIVEKEPRLAVCAVDRVREIEYRKKGVSEEDMRFSFVVNFPPGFKIGKYYKIAMWKWQ 260
           YIEIVEK+P L++CA++RVREIEYR KG+  ED+RFSFVVNFPPGFKIGKY++IA+WKWQ
Sbjct: 208 YIEIVEKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQ 267

Query: 261 RMPYWSPYEDVSGHDLRSMEAQNRMEKRAVAMIHELLSLTVEKKITLERIAHFRVPMDLP 320
           R+PYWSPYED+SG+DLRSMEAQNR+EKR+VA IHELLSLTVEKKITLERIAHFR  M+LP
Sbjct: 268 RLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLP 327

Query: 321 KKLKDFLLQHQGMFYISTRGNQGKLHTIFLREAYRKGDMIEPNDVYLARRRLAELILVSP 380
           KKLK+FLLQHQG+FYISTRGN GKLHT+FLRE Y++G+++EPNDVYLARRRLAEL+L+SP
Sbjct: 328 KKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSP 387

Query: 381 RKEPLGRELVSYTRHRDD 397
           RK  +  ELV Y    DD
Sbjct: 388 RKAKVDAELVRYRDGLDD 404

BLAST of Spo12871.1 vs. TAIR (Arabidopsis)
Match: AT5G45790.2 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 224.6 bits (571), Expect = 1.300e-58
Identity = 144/417 (34.53%), Postives = 235/417 (56.35%), Query Frame = 1

		  

Query: 19  NALNFTRPMSQKSTSIPKNQERMRDHAFDNYMEIEKKMRKILKFQELIIDQPHQSIPVAR 78
           N   + +P+    T +   + R RDH  D  +   +K+  IL+  +L+  +     P   
Sbjct: 50  NQRRWLKPVDSAQTRL---ENRTRDHQLDKIIPQIRKLNIILEISKLMSSKKRG--PFVS 109

Query: 79  LDFLAR---RIGFKRDEAGKFVLKLPKVFEIYEHPVQRILYLRFTRNALLQIEQEKHAID 138
           L  ++R    +G   +  G F+ K P  FEI+ HP  + L  + T    + I++E++ + 
Sbjct: 110 LQLMSRWKNLVGLNVN-VGAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVR 169

Query: 139 SQLPDAVTRLRKLLMLSNSGRLYLEHVRIARRDFGFPDDFEYSVVLKYPQYFRLFDAEDC 198
               DAV R++KLL+LS  G L +  +R+ R++ G P+DF  S++ KY   FRL D E  
Sbjct: 170 ECEVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLET- 229

Query: 199 MNKYIEIVEKEPR-LAVCAVDRVREIEYRKKGVSEEDMRFSFVVNFPPGFKIGKYYKIAM 258
               +E+V+++   L V  V+  RE+EYR+K +S+ +  ++F ++ P GFKI K ++  +
Sbjct: 230 ----LELVDRDDESLCVAKVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREEL 289

Query: 259 WKWQRMPYWSPYE--DVSGHDLRSMEAQNRMEKRAVAMIHELLSLTVEKKITLERIAHFR 318
             WQR+PY  PY+  ++S    R +E   R EKR VA+IHELLSLTVEK + +ER+AHFR
Sbjct: 290 KNWQRVPYVKPYDRKEIS----RGLE---RFEKRVVAVIHELLSLTVEKMVEVERLAHFR 349

Query: 319 VPMDLPKKLKDFLLQHQGMFYISTRGNQGKLHTIFLREAYRKGDMIEPNDVYLARRRLAE 378
             + +   +++ +L+H G+FY+ST+G+     T+FLREAY KG +IEPN +Y  RR++ +
Sbjct: 350 KDLGIEVNVREVILKHPGIFYVSTKGSS---QTLFLREAYSKGCLIEPNPIYNVRRKMLD 409

Query: 379 LILVSPRKEPLGRELVSYTRHRDDASYTRRRDNVTRSDKEQ---MNDSENLRGGRVG 427
           L+L+  R          Y+R        +R D   R +K +   ++ +E+  GGR G
Sbjct: 410 LVLLKTR----------YSR-----MLLQREDETHREEKSRDVLISSNEDWEGGRDG 430

BLAST of Spo12871.1 vs. TAIR (Arabidopsis)
Match: AT1G06440.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 221.5 bits (563), Expect = 1.100e-57
Identity = 136/353 (38.53%), Postives = 203/353 (57.51%), Query Frame = 1

		  

Query: 31  STSIPKNQERMRDHAFDNYMEIEKKMRKILKFQELIIDQPHQSIPVARLDFLAR---RIG 90
           +TS      R RD  F+  M+  K + K++  Q+L +  P    P   ++FL+R   ++ 
Sbjct: 25  TTSAQYVASRSRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLSRLSQKLH 84

Query: 91  FKRDEAGKFVLKLPKVFEIYEHPVQRILYLRFTRNALLQIEQEKHAIDSQLPDAVTRLRK 150
             R  A  F+ K P +F +   PV+   + R T  A+    QE  AI + L   V RL +
Sbjct: 85  LNRG-AASFLRKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVVDRLVR 144

Query: 151 LLMLSNSGRLYLEHVRIARRDFGFPDDFEYSVVLKYPQYFRLFDAEDCMNKYIEIV-EKE 210
           LL +S S  + L  V    R+ G PDDFE SV+ K P  F+L D  +     +E+V E+E
Sbjct: 145 LLSMSISKSIPLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILELVQEEE 204

Query: 211 PRLAV-CAVDRVREIEYRKK--GVSEEDMRFSFVVNFPPGFKIGKYYKIAMWKWQRMPYW 270
            RL    AV++ R +E  K+   V   +++FSF  ++PPG ++ K +K  + +WQR+PY 
Sbjct: 205 KRLEFEAAVEKWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQRLPYV 264

Query: 271 SPYEDVSGHDLRSMEAQNRMEKRAVAMIHELLSLTVEKKITLERIAHFRVPMDLPKKLKD 330
            PYED+ G   +S      +EKRAVA+ HE L+LTVEK + +E+I+HFR    +   ++D
Sbjct: 265 GPYEDMVGKK-KSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLNIRD 324

Query: 331 FLLQHQGMFYISTRGNQGKLHTIFLREAYRKGDMIEPNDVYLARRRLAELILV 377
             L H GMFY+ST+   GK HT+FLREAY +G +I+PN VY ARR+L +L+L+
Sbjct: 325 LFLDHPGMFYVSTK---GKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLL 372

BLAST of Spo12871.1 vs. TAIR (Arabidopsis)
Match: AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 159.8 bits (403), Expect = 3.900e-39
Identity = 128/430 (29.77%), Postives = 219/430 (50.93%), Query Frame = 1

		  

Query: 39  ERMRDHAFDNYMEIEKKMRKILKFQELIIDQPHQSIPVARLDFLARRIGFKRDEAGKFVL 98
           +R ++  FD+ ++ +KK++ +L  +++++ QP + + +  L    R +G K+      +L
Sbjct: 77  KRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALL 136

Query: 99  -KLPKVFEIYEHPVQRILYLRFTRNALLQIEQEKHAIDSQLPDA-VTRLRKLLMLSNSGR 158
            K P VFEI E     + +   +    L +++ +  I ++L D  V +LRKL+M+S   R
Sbjct: 137 RKYPGVFEIVEEGAYSLRFKMTSEAERLYLDEMR--IRNELEDVLVVKLRKLVMMSIDKR 196

Query: 159 LYLEHVRIARRDFGFPDDFEYSVVLKYPQYFRLFDAEDCMNKYIEIVEKEPRLAVCAVD- 218
           + LE +   + D G P +F  ++  +YPQYFR+          +E+   +P LAV A + 
Sbjct: 197 ILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTP--RGPALELTHWDPELAVSAAEL 256

Query: 219 -----RVREIEYRKKGVSEEDMRFSFVVNFPPGFKIGKYYKIAMWKWQRMPYWSPYEDVS 278
                R RE E R   + +   +F+ V   P G  + K     + +++ M Y SPY+D S
Sbjct: 257 SEDDNRTRESEERNL-IIDRPPKFNRV-KLPRGLNLSKSETRKISQFRDMQYISPYKDFS 316

Query: 279 GHDLRSMEAQNRMEKRAVAMIHELLSLTVEKKITLERIAHFRVPMDLPKKLKDFLLQHQG 338
              LRS   +   EK A  +IHELLSLT EK+  ++ + HFR      ++L+  L++H  
Sbjct: 317 --HLRSGTLEK--EKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPD 376

Query: 339 MFYISTRGNQGKLHTIFLREAYRKGDMIEPNDVYLARRRLAELILV-------SPRKEPL 398
           +FY+S +G +    ++FLREAYR  ++I+ + + L + ++  L+ V        PRK+  
Sbjct: 377 LFYVSLKGERD---SVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRKDEE 436

Query: 399 GRELVSYTRHRDDASYTRRRDNVTRSDKEQMNDSENLRGGRVGG-QDLGSESDSDGES-- 449
           GRE+        D S     +    SD E+ +D +    G  GG  D G  +D +GE   
Sbjct: 437 GREV------EIDGSDADGEEEEEESDAEEWSDVDGYLEGEDGGNDDDGDWTDDEGEEDV 487

BLAST of Spo12871.1 vs. TAIR (Arabidopsis)
Match: AT5G21970.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 142.9 bits (359), Expect = 4.900e-34
Identity = 123/438 (28.08%), Postives = 210/438 (47.95%), Query Frame = 1

		  

Query: 22  NFTRPMSQKSTSIPKNQERMRDHAFDNYMEIEKKMR---KILKFQELIIDQPHQSIPVAR 81
           +F R   +  TS  + Q+R R+          +K +   K++   E++  +    + V  
Sbjct: 34  SFRRVWVRFMTSSKRVQDRSREKRVQELEIATEKWKIASKVIFLMEVLKGERDMIMTVRS 93

Query: 82  LDFLARRIGF-KRDEAGKFVLKLPKVFEIYEHPVQRILYLRFTRNALLQIEQEKHAIDSQ 141
            +   R+I   K  +   F+ K PK+FE+Y+   + +L+   T      +++    ++  
Sbjct: 94  FEQYRRQINLPKPHKISDFIRKSPKLFELYKDQ-RGVLWCGLTEGGEDLLDEHDKLLEEN 153

Query: 142 LPDAVTRLRKLLMLSNSGRLYLEHVRIARRDFGFPDDFEYSVVLKYPQYFRLFDAEDCMN 201
              A   + + LM+S   +L L+ +   RRDFG P DF  + V  +PQ+F++    D   
Sbjct: 154 GDKAAEHVTRCLMMSVDKKLPLDKIVHFRRDFGLPLDFRINWVYNFPQHFKVVKLGDG-E 213

Query: 202 KYIEIVEKEPRLAVCAVDRVREIEYRKKGVSEED------MRFSFVVNFPPGFKIGKYYK 261
           +Y+E+V   P  A+       E+E +  G++E+       +  +F + FPP +K    Y+
Sbjct: 214 EYLELVSWNPAWAIT------ELEKKTLGITEDCEHKPGMLSLAFPMKFPPSYKKMYRYR 273

Query: 262 IAMWKWQRMPYWSPYEDVSGHDLRSMEAQNRMEKRAVAMIHELLSLTVEKKITLERIAHF 321
             +  +Q+  Y SPY D  G +  S E     +KRA+A++HELLS T+EK++  + + HF
Sbjct: 274 GKIEHFQKRSYLSPYADARGLEAGSKE----FDKRAIAVMHELLSFTLEKRLVTDHLTHF 333

Query: 322 RVPMDLPKKLKDFLLQHQGMFYISTRGNQGKLHTIFLREAYRKGDMIEPNDVYLARRRLA 381
           R    +P+KL    L+H G+FY+S R   GK  ++FL E Y   ++IE   + L + +  
Sbjct: 334 RREFVMPQKLMRIFLKHCGIFYVSER---GKRFSVFLTEGYEGPELIEKCPLILWKEK-- 393

Query: 382 ELILVSPRKEPLGRELVSYTRHRDDASYTRRRDNVTRSDKEQMNDSENLRGGRVGGQDL- 441
                          L+ +T +R      R+RD  T SD   M + E L  G  G +DL 
Sbjct: 394 ---------------LLKFTGYRG-----RKRDIQTYSDTLDMEERELLESGS-GDEDLS 433

Query: 442 -GSESDSDGESGYSDEDE 448
            G E D D +   +D+DE
Sbjct: 454 VGFEKDGDYDDVVTDDDE 433

The following BLAST results are available for this feature:
BLAST of Spo12871.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902212790|gb|KNA17088.1|7.2e-23799.7hypothetical protein SOVF_0832... [more]
gi|731363511|ref|XP_010693472.1|7.8e-19979.3PREDICTED: protein ROOT PRIMOR... [more]
gi|870846464|gb|KMS99025.1|8.9e-19579.9hypothetical protein BVRB_3g06... [more]
gi|359490387|ref|XP_002274057.2|1.8e-16668.3PREDICTED: protein ROOT PRIMOR... [more]
gi|645257143|ref|XP_008234277.1|3.3e-16567.7PREDICTED: protein ROOT PRIMOR... [more]
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BLAST of Spo12871.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RC56_SPIOL5.0e-23799.7Uncharacterized protein OS=Spi... [more]
A0A0J8E7F0_BETVU6.2e-19579.9Uncharacterized protein OS=Bet... [more]
F6HP54_VITVI1.2e-16668.3Putative uncharacterized prote... [more]
A0A061G0P5_THECC1.1e-16266.8Ubiquitin carboxyl-terminal hy... [more]
V4RLQ1_9ROSI4.1e-16268.2Uncharacterized protein OS=Cit... [more]
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BLAST of Spo12871.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RPD1_ARATH3.1e-15570.1Protein ROOT PRIMORDIUM DEFECT... [more]
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BLAST of Spo12871.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G33495.11.7e-15670.1Ubiquitin carboxyl-terminal hy... [more]
AT5G45790.21.3e-5834.5Ubiquitin carboxyl-terminal hy... [more]
AT1G06440.11.1e-5738.5Ubiquitin carboxyl-terminal hy... [more]
AT4G01037.13.9e-3929.7Ubiquitin carboxyl-terminal hy... [more]
AT5G21970.14.9e-3428.0Ubiquitin carboxyl-terminal hy... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 42..377
score: 8.8E
NoneNo IPR availablePANTHERPTHR31476FAMILY NOT NAMEDcoord: 1..459
score: 3.3E
NoneNo IPR availablePANTHERPTHR31476:SF9PROTEIN ROOT PRIMORDIUM DEFECTIVE 1coord: 1..459
score: 3.3E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010102 lateral root morphogenesis
biological_process GO:0008219 cell death
biological_process GO:0016310 phosphorylation
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009165 nucleotide biosynthetic process
biological_process GO:0006783 heme biosynthetic process
biological_process GO:0009156 ribonucleoside monophosphate biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0010150 leaf senescence
biological_process GO:0009693 ethylene biosynthetic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006952 defense response
biological_process GO:0006396 RNA processing
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0090351 seedling development
biological_process GO:0030150 protein import into mitochondrial matrix
biological_process GO:0008285 negative regulation of cell proliferation
biological_process GO:0006486 protein glycosylation
cellular_component GO:0005730 nucleolus
cellular_component GO:0005744 mitochondrial inner membrane presequence translocase complex
cellular_component GO:0009507 chloroplast
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004749 ribose phosphate diphosphokinase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
RNA-Seq Expression