Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATGGTGTTACAACAACATGTGCAAATCTTTCCTTAAAAATATCATTTCATATTTTATGGATTTGCTATTATTATTTGCCACTTTCCTCACTCACTCTCACACACACTCTCTCTCTCCTCCACCTCTTTTACTACAAAAACATTAACCACCGCCCATCGGAGTTCCAACACCGTTCATCGCACTCCAATCTACTACCTTTTTCTCGATTTGCTGGTAAAGCGTAAAGCGTACTTTTTATTTTATTTTGATTATGAGTGTCATTTGTTTGACCTTTTCTAATTAATGGTGGTCTGATCTTTTGATTCAGGGGCTTCGCTTAATCTGTTGTTCATCGGACATTGAATGTAAGTGCGATTTTCTTCTTCTTTGTTAATTATAAGCTCAATTTGCAACTTCTTATGTTGATTTTTGTTGTTTATTGTATAATTCGATAATTGTTTTTTTGGTAATGGGTTGATTTCGGGTGTGGGATTTTTGATGGTTTGTTATTGGAGGAACTAAACTATTGTAAATGTTGGGTTTATGTGTTTTTTTGGTGCCAAACTATGATAGGAAATCTGGGTTAACTTGTTTACCTATGAAAAATCCCTTATTGTTACAATGTGGAATTGGAAACTTCCGCAAAGAAAGAAATGTGAAATTTGGAATCTTTCATGTTGATTTTCTCTGATTTGTTGATGTCAAATTAGAGAAAGAACTGCAATTTTTCTAGAAATTTGAAAGGATTTGTCATTGCAGCCATCCAACATTCATTCTGCTGTAAGACCAAGTGTTGTGGAGCTACTGTTGTATCTGCTTAATTATTCTGCTGTCTGCACTTTGACAACAGTGCCTAACATAAAATGGTAGCTGCGATGGCAGCATCAGCAGTCACACAGTCTTTACTGCGGCCTGTTCGGTCATCCTCTTCATCTAGTCCTCATTATTCATCGTCTAAGTCACGACATTTTTCATCTCTCTCCTCCAACCTACAATTCAAAAACCATGATTGCAATGGCTCCAGCTCTTCACTGTTTTTGATCAGCAATGACCGCAGTAGGAGCCCTTTATCACTTCATCTTCATCACCGGTTTAAACCAAGTGCTTCCCTTGGTTCGGATCTTCCTCATCCTATTCAACCGGTACTTTACTAATGTTTTTCCTTCACTTTAAATTCTTCGATTCTAAATGCTTTTATGAATTTCTATAAGAATTTTTGTTCTTGTTATTTCTTCTGTAAATTGAAATCAAAGGTAGAGGAAGCAGCTAAGATCAACAGAAATGATGAGGTAATGAAGCAATGGGATGGGTGGACGGCAAAGTTTGCTGCAGCTGCCAATATCCCATTTCTCCTCCTTCAGTTGCCTCAGATTTGGCTCAATGCTCAAAATCTTATGGCTGGCAACAATTCTGCTCTTTTGGCAGTTAATTGGCTGGTAAGCTTAATTTACACTCCTTGCTCACAGTTTTTTTTCAAAAACATATTTTTCTTCAGATTCAGAACATCTAAGTCCAAATCATCAGTGAAAAATATTGCAGGGCTCCCTAACTGGTTTGCTTGCGAATCTTTCGCTGCTTTCATACTTTGCCAAGAAAAAAGAGACAGAAGCAATGATAGTGCAATGCCTGGGAATTGTTACCACTTATGTAATGATTTCACAGTTAGCAATGGCTGAGGCAATGCCCTCTCTTTATTTCAGTTTAACCTCCATAGTGGTTGGCACTGGTGTTATCTCCAATTTTCTTAATTACTTTGGCATTCTTCCACCTGTTATCTGGGGTTTGTGGGAAGATTTTATCACTGTCGGTGGGCTTTCTGTCCTTCCTCAGGTGCTGCCTCTGATTTCTCTCTTATCCACCATGGAAATGTAAAACTAGTATTCCTGATCATTGATACTTTCCACCAAACATTAACTCGTGTTCTGCATGGTGGATACAGGTTATGTGGTCCACATTTGTTCCATATATTCCGAACAGCATTCTTCCTGGGGCTATATCTTTTGTTTTAGCCATGGTAGCAGCTATCATGGTAAGTTTAATCTCTTACCCTATATCTGATACGAAGTATGAAATAAACGTGAGGAAGCAAAGGCACTAACAATAATATAGGATCCCTGAAGAACTTTTATTTTCCAACTTTTGGAGGGGGAAAATCTATGTTTGATTATGAATTTGGAACACCATTGTGCTTGTTTATTATTTGAGGTCCATTTGAATGAGGCATGATCACTATTTTCTGCCATTCTGTTTTATCCAATCTAATCTGTCTTTCAGAAAGCTGCGAAGGAGGCAAATAAATAAATAAAAGCTAATGCATTCTATTATTCTGTTTCCTTCATATGTTGGTCACTGGCCAGTAGACATTTTGTACTTTCTTTTGAAGTGGAAAAGGAAGCAAGTGTGGAGATCAAACTCTTTAGGTTATGATCTATCCAAATTAACATTCTTTAAAGAGGCCGGTATTTGTAAAAACGTATGCAGTTGGTAGTTTTTCTTACTCAACCTAGATAAGGAGTAGTTAATTATCTCTACATTTATTGATGTGCAGCAGCCAGCATGTGCTAGTCTTTCAGCCAATGAACGAGTAACCTTAAGATTTTTGCTACGAAAGAAAACTAGGCGGTGATCTCTAAATTCATTGTTACGCTAGGCTGCTAGCTAGTTCTTCAACTATTGGATGACAAATAGGCTATTGTTGTGCAGTGTGCTAGTCTTTCAGCTATTATCAATTTGGTGTTTAAACTTTTTTATTGTTGTAAATATTGAATTTTAGGCCTTTGTCAACAAGTAGTTGGGTATTTTTTTTTTCAAAAAGCATTGAGATCTTGCATCATTCGGAATGTATGCTAACCTTTCGCAGGTTAGAACGGGTAAACTCTCTGAGAAAGGTGTCAAATTTTATGGAGCTATATCAGGGTGGACTGCTACACTTCTCTTCATGTGGATGCCAGTTCCACAATTGGTATTTAACAATCTGGCTATGTTACATATTGCGGAGTATTAATGTAAAAAGTTTTTTGCAGATTCCTGTATGTGTACACTTTATGACTTGGTTCTTTTCTTTCAGTGGACAAACTTACTGAGTCCTGATAACATAAAAGGTTTATCGCCTTTGACAATGTTGCTGGCAATGGCTGGAAATGGATTAATGATTCCTCGTGCACTTTTCTCCCGCGATTTTATGTGGTATGGTGATTTTTTTACCCATCCAACAGTTGTGTTTCATATACCTCATAGTTAAATATGCATGAACTGAAAATACTACTAGATAAAACATTTTACATTAGTTCTGAATATTTCCACTGTGCTAAAGTGTTGGATTTTGGTTCAGGTTTCTTGGTTCGTCTTGGGCAACTCTTCTTTATGGATGGGGGAATATTGTGTGCATGTACTTGTGAGTTGCTTACTAGCCATCAGTTTCTTTTCCTCTTTTGTATTCAAATTGTAGCAGTTTCCGGACTGCTAAAGATAAACACACTTTGAATACAGGTTTAACAGCATCAGTCGTGAATCTTTCCTTGCAACCACAGCGGGCTTACTTATCTGGATAGGTTATCATTCAATCCATAATCCTCAATTATAGTTACTTTTGTTGAATTTCTTTACTTTTCTTTTCGTTTATGTTCTCTTACACCAATATCTATTAAGTATCTGTTAATTAGGTTCTAGGGTATCAATTATTGTGTGTTTAAATGATGTAATAAAGTATTTTGGGGTGACAGGAGTTGCATTTTGGAAGGACAGTAAGGCATACGGACATTCATCTCCGTTGAGGTCTTTCAAGGAGCTGTTGTTTGGGTCATGATTTTGAACAATACTTACACCAGCTAAAGAAACAAGGGCAGAAACGATTCTAGGACAATAGACTAGATTAGATGCTCATGCAAATGCAAATGCATAATTTAATTAATTTTTGTTAGACGTCCGAGTTGATCAATTAATAAGATGTATAACATGATTGTAAGATTTTACACTTACAGTCTTGGTTTGTACTGTATGACAGAGTCATTTACATTAAAGACAAGAAAGTCATGTAATGTGAATAATAATGTATTGCAATAAACATAGTTTTCATCAATGATTCATCATCTTTGTTCTTCGTTCTTCAAGTATCCATTTTTTGCGTTTGTATTGAGCATTGTATACATATGATTTAG AATGGTGTTACAACAACATGTGCAAATCTTTCCTTAAAAATATCATTTCATATTTTATGGATTTGCTATTATTATTTGCCACTTTCCTCACTCACTCTCACACACACTCTCTCTCTCCTCCACCTCTTTTACTACAAAAACATTAACCACCGCCCATCGGAGTTCCAACACCGTTCATCGCACTCCAATCTACTACCTTTTTCTCGATTTGCTGGGGCTTCGCTTAATCTGTTGTTCATCGGACATTGAATCCATCCAACATTCATTCTGCTGTAAGACCAAGTGTTGTGGAGCTACTGTTGTATCTGCTTAATTATTCTGCTGTCTGCACTTTGACAACAGTGCCTAACATAAAATGGTAGCTGCGATGGCAGCATCAGCAGTCACACAGTCTTTACTGCGGCCTGTTCGGTCATCCTCTTCATCTAGTCCTCATTATTCATCGTCTAAGTCACGACATTTTTCATCTCTCTCCTCCAACCTACAATTCAAAAACCATGATTGCAATGGCTCCAGCTCTTCACTGTTTTTGATCAGCAATGACCGCAGTAGGAGCCCTTTATCACTTCATCTTCATCACCGGTTTAAACCAAGTGCTTCCCTTGGTTCGGATCTTCCTCATCCTATTCAACCGGTAGAGGAAGCAGCTAAGATCAACAGAAATGATGAGGTAATGAAGCAATGGGATGGGTGGACGGCAAAGTTTGCTGCAGCTGCCAATATCCCATTTCTCCTCCTTCAGTTGCCTCAGATTTGGCTCAATGCTCAAAATCTTATGGCTGGCAACAATTCTGCTCTTTTGGCAGTTAATTGGCTGGGCTCCCTAACTGGTTTGCTTGCGAATCTTTCGCTGCTTTCATACTTTGCCAAGAAAAAAGAGACAGAAGCAATGATAGTGCAATGCCTGGGAATTGTTACCACTTATGTAATGATTTCACAGTTAGCAATGGCTGAGGCAATGCCCTCTCTTTATTTCAGTTTAACCTCCATAGTGGTTGGCACTGGTGTTATCTCCAATTTTCTTAATTACTTTGGCATTCTTCCACCTGTTATCTGGGGTTTGTGGGAAGATTTTATCACTGTCGGTGGGCTTTCTGTCCTTCCTCAGGTTATGTGGTCCACATTTGTTCCATATATTCCGAACAGCATTCTTCCTGGGGCTATATCTTTTGTTTTAGCCATGGTAGCAGCTATCATGGTTAGAACGGGTAAACTCTCTGAGAAAGGTGTCAAATTTTATGGAGCTATATCAGGGTGGACTGCTACACTTCTCTTCATGTGGATGCCAGTTCCACAATTGTGGACAAACTTACTGAGTCCTGATAACATAAAAGGTTTATCGCCTTTGACAATGTTGCTGGCAATGGCTGGAAATGGATTAATGATTCCTCGTGCACTTTTCTCCCGCGATTTTATGTGGTTTCTTGGTTCGTCTTGGGCAACTCTTCTTTATGGATGGGGGAATATTGTGTGCATGTACTTGTTTAACAGCATCAGTCGTGAATCTTTCCTTGCAACCACAGCGGGCTTACTTATCTGGATAGGAGTTGCATTTTGGAAGGACAGTAAGGCATACGGACATTCATCTCCGTTGAGGTCTTTCAAGGAGCTGTTGTTTGGGTCATGATTTTGAACAATACTTACACCAGCTAAAGAAACAAGGGCAGAAACGATTCTAGGACAATAGACTAGATTAGATGCTCATGCAAATGCAAATGCATAATTTAATTAATTTTTGTTAGACGTCCGAGTTGATCAATTAATAAGATGTATAACATGATTGTAAGATTTTACACTTACAGTCTTGGTTTGTACTGTATGACAGAGTCATTTACATTAAAGACAAGAAAGTCATGTAATGTGAATAATAATGTATTGCAATAAACATAGTTTTCATCAATGATTCATCATCTTTGTTCTTCGTTCTTCAAGTATCCATTTTTTGCGTTTGTATTGAGCATTGTATACATATGATTTAG ATGGTAGCTGCGATGGCAGCATCAGCAGTCACACAGTCTTTACTGCGGCCTGTTCGGTCATCCTCTTCATCTAGTCCTCATTATTCATCGTCTAAGTCACGACATTTTTCATCTCTCTCCTCCAACCTACAATTCAAAAACCATGATTGCAATGGCTCCAGCTCTTCACTGTTTTTGATCAGCAATGACCGCAGTAGGAGCCCTTTATCACTTCATCTTCATCACCGGTTTAAACCAAGTGCTTCCCTTGGTTCGGATCTTCCTCATCCTATTCAACCGGTAGAGGAAGCAGCTAAGATCAACAGAAATGATGAGGTAATGAAGCAATGGGATGGGTGGACGGCAAAGTTTGCTGCAGCTGCCAATATCCCATTTCTCCTCCTTCAGTTGCCTCAGATTTGGCTCAATGCTCAAAATCTTATGGCTGGCAACAATTCTGCTCTTTTGGCAGTTAATTGGCTGGGCTCCCTAACTGGTTTGCTTGCGAATCTTTCGCTGCTTTCATACTTTGCCAAGAAAAAAGAGACAGAAGCAATGATAGTGCAATGCCTGGGAATTGTTACCACTTATGTAATGATTTCACAGTTAGCAATGGCTGAGGCAATGCCCTCTCTTTATTTCAGTTTAACCTCCATAGTGGTTGGCACTGGTGTTATCTCCAATTTTCTTAATTACTTTGGCATTCTTCCACCTGTTATCTGGGGTTTGTGGGAAGATTTTATCACTGTCGGTGGGCTTTCTGTCCTTCCTCAGGTTATGTGGTCCACATTTGTTCCATATATTCCGAACAGCATTCTTCCTGGGGCTATATCTTTTGTTTTAGCCATGGTAGCAGCTATCATGGTTAGAACGGGTAAACTCTCTGAGAAAGGTGTCAAATTTTATGGAGCTATATCAGGGTGGACTGCTACACTTCTCTTCATGTGGATGCCAGTTCCACAATTGTGGACAAACTTACTGAGTCCTGATAACATAAAAGGTTTATCGCCTTTGACAATGTTGCTGGCAATGGCTGGAAATGGATTAATGATTCCTCGTGCACTTTTCTCCCGCGATTTTATGTGGTTTCTTGGTTCGTCTTGGGCAACTCTTCTTTATGGATGGGGGAATATTGTGTGCATGTACTTGTTTAACAGCATCAGTCGTGAATCTTTCCTTGCAACCACAGCGGGCTTACTTATCTGGATAGGAGTTGCATTTTGGAAGGACAGTAAGGCATACGGACATTCATCTCCGTTGAGGTCTTTCAAGGAGCTGTTGTTTGGGTCATGA MVAAMAASAVTQSLLRPVRSSSSSSPHYSSSKSRHFSSLSSNLQFKNHDCNGSSSSLFLISNDRSRSPLSLHLHHRFKPSASLGSDLPHPIQPVEEAAKINRNDEVMKQWDGWTAKFAAAANIPFLLLQLPQIWLNAQNLMAGNNSALLAVNWLGSLTGLLANLSLLSYFAKKKETEAMIVQCLGIVTTYVMISQLAMAEAMPSLYFSLTSIVVGTGVISNFLNYFGILPPVIWGLWEDFITVGGLSVLPQVMWSTFVPYIPNSILPGAISFVLAMVAAIMVRTGKLSEKGVKFYGAISGWTATLLFMWMPVPQLWTNLLSPDNIKGLSPLTMLLAMAGNGLMIPRALFSRDFMWFLGSSWATLLYGWGNIVCMYLFNSISRESFLATTAGLLIWIGVAFWKDSKAYGHSSPLRSFKELLFGS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo12711.1 vs. NCBI nr
Match: gi|902217669|gb|KNA17855.1| (hypothetical protein SOVF_076740 [Spinacia oleracea]) HSP 1 Score: 821.6 bits (2121), Expect = 6.200e-235 Identity = 422/423 (99.76%), Postives = 422/423 (99.76%), Query Frame = 1
BLAST of Spo12711.1 vs. NCBI nr
Match: gi|731322841|ref|XP_010672116.1| (PREDICTED: maltose excess protein 1-like, chloroplastic [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 683.7 bits (1763), Expect = 2.000e-193 Identity = 353/423 (83.45%), Postives = 379/423 (89.60%), Query Frame = 1
BLAST of Spo12711.1 vs. NCBI nr
Match: gi|720087604|ref|XP_010244206.1| (PREDICTED: maltose excess protein 1, chloroplastic-like [Nelumbo nucifera]) HSP 1 Score: 498.0 bits (1281), Expect = 1.600e-137 Identity = 242/351 (68.95%), Postives = 287/351 (81.77%), Query Frame = 1
BLAST of Spo12711.1 vs. NCBI nr
Match: gi|743902173|ref|XP_011044417.1| (PREDICTED: maltose excess protein 1, chloroplastic-like [Populus euphratica]) HSP 1 Score: 489.2 bits (1258), Expect = 7.300e-135 Identity = 257/419 (61.34%), Postives = 308/419 (73.51%), Query Frame = 1
BLAST of Spo12711.1 vs. NCBI nr
Match: gi|590639760|ref|XP_007029762.1| (Root cap 1 isoform 1 [Theobroma cacao]) HSP 1 Score: 488.8 bits (1257), Expect = 9.500e-135 Identity = 253/375 (67.47%), Postives = 296/375 (78.93%), Query Frame = 1
BLAST of Spo12711.1 vs. UniProtKB/TrEMBL
Match: A0A0K9REC1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_076740 PE=4 SV=1) HSP 1 Score: 821.6 bits (2121), Expect = 4.300e-235 Identity = 422/423 (99.76%), Postives = 422/423 (99.76%), Query Frame = 1
BLAST of Spo12711.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CUQ2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g056650 PE=4 SV=1) HSP 1 Score: 683.7 bits (1763), Expect = 1.400e-193 Identity = 353/423 (83.45%), Postives = 379/423 (89.60%), Query Frame = 1
BLAST of Spo12711.1 vs. UniProtKB/TrEMBL
Match: A0A061F6Z8_THECC (Root cap 1 isoform 1 OS=Theobroma cacao GN=TCM_025637 PE=4 SV=1) HSP 1 Score: 488.8 bits (1257), Expect = 6.700e-135 Identity = 253/375 (67.47%), Postives = 296/375 (78.93%), Query Frame = 1
BLAST of Spo12711.1 vs. UniProtKB/TrEMBL
Match: B9I6U0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s07340g PE=4 SV=2) HSP 1 Score: 485.0 bits (1247), Expect = 9.600e-134 Identity = 255/419 (60.86%), Postives = 306/419 (73.03%), Query Frame = 1
BLAST of Spo12711.1 vs. UniProtKB/TrEMBL
Match: A0A0C5DIX1_CAMSI (Maltose excess protein 1 OS=Camellia sinensis PE=2 SV=1) HSP 1 Score: 484.2 bits (1245), Expect = 1.600e-133 Identity = 243/356 (68.26%), Postives = 286/356 (80.34%), Query Frame = 1
BLAST of Spo12711.1 vs. ExPASy Swiss-Prot
Match: MEX1_ORYSJ (Maltose excess protein 1-like, chloroplastic OS=Oryza sativa subsp. japonica GN=Os04g0602400 PE=2 SV=2) HSP 1 Score: 457.2 bits (1175), Expect = 1.900e-127 Identity = 230/357 (64.43%), Postives = 276/357 (77.31%), Query Frame = 1
BLAST of Spo12711.1 vs. ExPASy Swiss-Prot
Match: MEX1_ARATH (Maltose excess protein 1, chloroplastic OS=Arabidopsis thaliana GN=MEX1 PE=2 SV=2) HSP 1 Score: 442.2 bits (1136), Expect = 6.400e-123 Identity = 233/393 (59.29%), Postives = 283/393 (72.01%), Query Frame = 1
BLAST of Spo12711.1 vs. TAIR (Arabidopsis)
Match: AT5G17520.1 (root cap 1 (RCP1)) HSP 1 Score: 442.2 bits (1136), Expect = 3.600e-124 Identity = 233/393 (59.29%), Postives = 283/393 (72.01%), Query Frame = 1
BLAST of Spo12711.1 vs. TAIR (Arabidopsis)
Match: AT5G17523.1 (Similar to Maltose excess protein 1) HSP 1 Score: 156.0 bits (393), Expect = 5.200e-38 Identity = 101/200 (50.50%), Postives = 125/200 (62.50%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo12711.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo12711.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo12711.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 2
BLAST of Spo12711.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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