Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAATAAATAAAACACAACCTGATCTACGGTGAGATCCTAAAAACACATACAGAGTAACATTATGATTCAATTCGTGTTAATTATTTGGTTAAAACTTAAAGCCTTAAAAGTACCAAAAGTTAGCTCCTTCTTCCAAACCCTAACCAGCCGCCATCTTTGAATTACCTAGCGGCTCGCCGGTAATCTATCCCCTCATCCCTCTGATTGCCAACGACTCTGCTCTCCTAGGATGAATTTGTATCAAGTGTCAAAGATCCACAAAGCTGCATCGCCGCCCGCAAATTCAGAAAAGGAAATTCATCGATTCAGGTTAGGTTTGTGAGTTCCCTCACCATCCGTTTCTAAGAAGATGAAGTTGGGAATCAGGTTGTTGTTTTTCTTGCATTTTGATTTTCAACCTCTCTAAATTATTGATTTTGAGTGTGTAGATTAGGAGTATAATTTAGAGCTCCTTTGGCGTTTCAGTGGGTCTTATTGTGGTGGTGTTGCTCTTCCTTGTTTGTTCCTTTTAATTTTGGGAAATTCTCTAAAACATTCGTCATCCTTCCCTCCAGAAATTCTAGGTTATTAAAACAGAAACCCCTCATTTCCCCCTTTATCTTCTTCGTATTTTCCCTCTCACCCCCTTCATTTCCTTCCTTAGATGAATCTACTACTTTTTCCTGAGTTTTTTTTTTCACTGTGGCAGAATGCATCGAGACTGCCACGTGGGTTTTGTATGTAACATAATATACTCTTATGTAACAGAAGACTGATGTTACATAAGTAATAAGTTTCTTCCTTTGTATGTTATTATTTAAACTAAAAATCTATATAATTATAAAGTAATGATGTCGATTTCTTTTGAAGATCAATGCAACCGGATTCTCTGTTCTTGAATATTCAGTTTTGGAAATTAAGAATTTGCATTATCCACCTCACATAAATATTCCACTCTATTTTGCATCTTTGGTGGGCCAATTGTTAGGAATTTGGTGAATGGTCCGAATTTTATTTTCTTCATCTTTTTACTTTGTGTTCCACTTTTTCCCGTGTTTTCCTGATCAAACTTAATTTATGTAATTTGAGTATTTAGTTTTTAGATACGGGGACAAGTTGTGAATGGTTTCTGGAACTCAACATGATGTATATGCTATATTACAGTAGTATACATGGTAGCTAACAGGTCAGCATTGTCTCATATATAGTCAGTTGTTTGTAGGAGTAGTATTCATGGTATCTAATAGGTCAGCATTGTCTCGTATATAGTCAGCTTTTTGTAGGAGCTACTAGAGTTAACCATAGTCATTATTATATTGGTTAATTAGGTTGAAATTACTGAAATAATGTTATATTAGAGGGAATTTGGATTATTAATGTTATTTTAGAGAAAGTGGCAAAATTTTTGTTACTATTGAGAATTTGCAAAAGTATAATGCTTCCATAGAGAATTTCCCTTTAATTTTTATATTTTTATGTTATGAGTAGCTTTTAGGAGCTTAAGGGGGATTTATGTTTCTCGCATTTTGGGGTAAATGATGTTTGTTCTAACAATTTGGAACAAATAGTTAGTCAGTTGGGAAATCCTATTGGTATTCTTAATTATGTAAGAAGTTTGAAGGATGAGGACAACAATTTCTACAAAAAGAATGCTACTGGTTTGGCTATTTCAAAATATTTTTTTGCTATCAAGATCTTGTCATTTGTATTGGTGAGTAATAAGGATAAGTCAGTTTTTTTGGGTCTTGTTCTATCCCTCAATATATGAACTTGGGTGCTTGCTTATCAAGGAGAAAGACTTTGATAAAGTGGGTTAGTTGTGCACAGCGGTGTTGTGTTATGATCCTGTTAAAAAACTATATGGAGGGAAGTGGCAGCTATATGGAGCTTAAAAAACTCAATCTATCTTTCAGGGATCTTGCACACGCACTTAAGATTGACCCTCAAAACCGAGAATTTCAGCTGAATCTTAAGGAGGTGACTTCTTTATTGGGTTGGTCTCCAGATTTTGTGGAAGATGCACTTGAAGTAGTTCAAGAGGAGGAGTTGTTTAAGGGAAGTGTCCAAAATGAGAAGGAGGAAAACAAAAGGAAGGAAAGAAGGGGACAAAGGAAGGAGGGCATACTCACATGTGTTCCGGTGTTAAGAATGACACCAAGATGGAAAAGAACGTTGTAGGAAAATTATTGAATGTAGAGGGTGAAGTCAACCCTACTAACCAAGATCACAGGCCCAACATTATTGACAACAATTCAGCTCTGAAATCTACTTTAGAAACAAAATACCCAAATCTTGCAGGGTTCAGGTTTCGATTTTCAAATCGAAAACGAATGGATTCTTATTTGCATCTCAGTCCATCAATGTATAGAGAGATTTCCAAGGAAAGAACATTATTTTTCTAATTTTCTTTTCAAAAGAAGATGATTAACATTCGAGTCCTCGATCCATCAAGGAAGATGGATTGTAATGAAACTCATGAAGGTAATACAACAATGAAGATTAGTCACCCTCTTGTTGAAGGGCATGATAGGTGTGAAACAACTCCAGAGTTGGCACAAGAAGATCCAGCTACAAGTGTGGTAATCCAAGCGTCAACGCGTGAAGCTACGTCATCTTTGATCCTTCCAAATGCAAAGTTTCGTCCCTGTTGAAGTGTCTTGTTCGTCCAGCCTATCCCTCCTCTCAAAACATCTCGTTGACTGTATCTTATCACTCTCGCCTAAGGTTAAGAAGAAAGAATGGGAATTTTAATTTGAAAGGTAGAAGGCCCTCAACTTTTACTAACTCTTTCTTTTGATGGGTAAGTATCGGTTCCAAAAGAAGTTTGTCCTGCCTCGTTGAAGACTCTTGGTATCCAGTTCTATCCCCCGTGTTTTAATTTTTAATGTGTAGTTCTTGGTTAGTTTATGTAATGGTTTAGCTATTGTAAAAAAAAAAGTGCCAAAAGTTAGAGTCAGATTATGTCTACATTCCTGCTACCATTCATGGCATCATCAAACAGAACTATGGTGTATGTAATCCTTACATTTCATTTGCAAGAAACTGGCGCTTCAGAAATATTTGTAATTACAAATCATGAATATTCGTATTTATTTTTCAAATGTACAGAGTAATACGTCAACACGACTTTTCATTTAAAGTTGGTGTTGAATAAATATTGTACAACAGAGTAAAAAAAA TAAATAAATAAAACACAACCTGATCTACGGTGAGATCCTAAAAACACATACAGAGTAACATTATGATTCAATTCGTGTTAATTATTTGGTTAAAACTTAAAGCCTTAAAAGTACCAAAAGTTAGCTCCTTCTTCCAAACCCTAACCAGCCGCCATCTTTGAATTACCTAGCGGCTCGCCGGTAATCTATCCCCTCATCCCTCTGATTGCCAACGACTCTGCTCTCCTAGGATGAATTTGTATCAAGTGTCAAAGATCCACAAAGCTGCATCGCCGCCCGCAAATTCAGAAAAGGAAATTCATCGATTCAGGTTAGGTTTGTGAGTTCCCTCACCATCCGTTTCTAAGAAGATGAAGTTGGGAATCAGGGATCTTGCACACGCACTTAAGATTGACCCTCAAAACCGAGAATTTCAGCTGAATCTTAAGGAGGTGACTTCTTTATTGGGTTGGTCTCCAGATTTTGTGGAAGATGCACTTGAAGTAGTTCAAGAGGAGGAGTTGTTTAAGGGAAGTGTCCAAAATGAGAAGGAGGAAAACAAAAGGAAGGAAAGAAGGGGACAAAGGAAGGAGGGCATACTCACATGTGTTCCGGTGTTAAGAATGACACCAAGATGGAAAAGAACGTTGTAGGAAAATTATTGAATGTAGAGGGTGAAGTCAACCCTACTAACCAAGATCACAGGCCCAACATTATTGACAACAATTCAGCTCTGAAATCTACTTTAGAAACAAAATACCCAAATCTTGCAGGGTTCAGGTTTCGATTTTCAAATCGAAAACGAATGGATTCTTATTTGCATCTCAGTCCATCAATGTATAGAGAGATTTCCAAGGAAAGAACATTATTTTTCTAATTTTCTTTTCAAAAGAAGATGATTAACATTCGAGTCCTCGATCCATCAAGGAAGATGGATTGTAATGAAACTCATGAAGGTAATACAACAATGAAGATTAGTCACCCTCTTGTTGAAGGGCATGATAGGTGTGAAACAACTCCAGAGTTGGCACAAGAAGATCCAGCTACAAGTGTGGTAATCCAAGCGTCAACGCGTGAAGCTACGTCATCTTTGATCCTTCCAAATGCAAAGTTTCGTCCCTGTTGAAGTGTCTTGTTCGTCCAGCCTATCCCTCCTCTCAAAACATCTCGTTGACTGTATCTTATCACTCTCGCCTAAGGTTAAGAAGAAAGAATGGGAATTTTAATTTGAAAGGTAGAAGGCCCTCAACTTTTACTAACTCTTTCTTTTGATGGGTAAGTATCGGTTCCAAAAGAAGTTTGTCCTGCCTCGTTGAAGACTCTTGGTATCCAGTTCTATCCCCCGTGTTTTAATTTTTAATGTGTAGTTCTTGGTTAGTTTATGTAATGGTTTAGCTATTGTAAAAAAAAAAGTGCCAAAAGTTAGAGTCAGATTATGTCTACATTCCTGCTACCATTCATGGCATCATCAAACAGAACTATGGTGTATGTAATCCTTACATTTCATTTGCAAGAAACTGGCGCTTCAGAAATATTTGTAATTACAAATCATGAATATTCGTATTTATTTTTCAAATGTACAGAGTAATACGTCAACACGACTTTTCATTTAAAGTTGGTGTTGAATAAATATTGTACAACAGAGTAAAAAAAA ATGAAGTTGGGAATCAGGGATCTTGCACACGCACTTAAGATTGACCCTCAAAACCGAGAATTTCAGCTGAATCTTAAGGAGGTGACTTCTTTATTGGGTTGGTCTCCAGATTTTGTGGAAGATGCACTTGAAGTAGTTCAAGAGGAGGAGTTGTTTAAGGGAAGTGTCCAAAATGAGAAGGAGGAAAACAAAAGGAAGGAAAGAAGGGGACAAAGGAAGGAGGGCATACTCACATGTGTTCCGGTGTTAAGAATGACACCAAGATGGAAAAGAACGTTGTAG MKLGIRDLAHALKIDPQNREFQLNLKEVTSLLGWSPDFVEDALEVVQEEELFKGSVQNEKEENKRKERRGQRKEGILTCVPVLRMTPRWKRTL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo12538.1 vs. NCBI nr
Match: gi|902156270|gb|KNA06001.1| (hypothetical protein SOVF_185110 isoform C [Spinacia oleracea]) HSP 1 Score: 185.3 bits (469), Expect = 5.000e-44 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of Spo12538.1 vs. NCBI nr
Match: gi|902156269|gb|KNA06000.1| (hypothetical protein SOVF_185110 isoform B [Spinacia oleracea]) HSP 1 Score: 178.3 bits (451), Expect = 6.100e-42 Identity = 89/93 (95.70%), Postives = 90/93 (96.77%), Query Frame = 1
BLAST of Spo12538.1 vs. NCBI nr
Match: gi|902156268|gb|KNA05999.1| (hypothetical protein SOVF_185110 isoform A [Spinacia oleracea]) HSP 1 Score: 176.0 bits (445), Expect = 3.000e-41 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1
BLAST of Spo12538.1 vs. NCBI nr
Match: gi|902171371|gb|KNA07995.1| (hypothetical protein SOVF_166650 [Spinacia oleracea]) HSP 1 Score: 82.0 bits (201), Expect = 5.900e-13 Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 1
BLAST of Spo12538.1 vs. NCBI nr
Match: gi|902195666|gb|KNA12920.1| (hypothetical protein SOVF_122040 [Spinacia oleracea]) HSP 1 Score: 63.9 bits (154), Expect = 1.700e-7 Identity = 36/72 (50.00%), Postives = 50/72 (69.44%), Query Frame = 1
BLAST of Spo12538.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QHA7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_185110 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 3.500e-44 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of Spo12538.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFH3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_185110 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 4.200e-42 Identity = 89/93 (95.70%), Postives = 90/93 (96.77%), Query Frame = 1
BLAST of Spo12538.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFF2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_185110 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 2.100e-41 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1
BLAST of Spo12538.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QL57_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_166650 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 4.100e-13 Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 1
BLAST of Spo12538.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R075_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_122040 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.200e-7 Identity = 36/72 (50.00%), Postives = 50/72 (69.44%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo12538.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo12538.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo12538.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo12538.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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