Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATGACGTGGCAATCTCAAATGCCCAATAGGACCCATACCCGGTTACAATTTGATGACCCAAATAAAAAACAAAATTAAGTTGACGGACCCAATCAACACCTACTTCGGTTCTTCATCTCTCTTCTTCTCGGAAGAATTAATTCTGGGTTTGATTTTGATCAAAATTAGCGAAGATGAGATTTTGTTGGTTAATCATCGCTCCATTTTTCCTGTATTTCGTAACCCTGAAAATTTCAGGTGATTCAGTAATCACAGCTCAAGGAGGTAAATCAATCTTATAAAAAAAATTCAGTATTTTTCATTAGCCCGTTTCAATTTAATGCCAAATTGTTTAGTTTGGTTGTTCTTTTTCAAATAATTATGCTCTTATATAATGTACTGAATTATTTGTGTTGCAATTTTTGTCTTACCCAGTTGGGGAATCAAGAACCCTAATCGAGAGTGATTTTTTGGGTTTCATTTCTGTTTACTAATTAGTTAATGTAGATGTTTTGAGCTGGATTTCCCGAGTTTATGAATTTTGAGACAAATATGAACCCCCATTAGAGGAAATCTAAACTTTATTTTGGTTTTGAGTAAATGGGTTTATGCTAAACAGGAATTTTCTGTGGGTTTAGCTTGTTTTGGAGGAATCAATTCGCTTGATCTATCGATTTCGTGGGATTTGGTTGATTTCAGTTCTTATATGGCTGTCATGTCTTCAACTGGTGATATTGAGTGTTCTTTGGGTTGTTGTTTAATGTTTTACTTGGATGGTGAGAGAATGGGTATTGTTGTATGTGAGTGCTTTGACAGTTAGACAAACTAAGGGTCAAGTTTAACTTTCTCCATGTTATTGCAACTCACAAGGGTGAGGTTGTATATGTAACATGATAAATCTAATACCCCCTCGCTTGTCCTTAGCAAGAGCTGCTGTAGATCAGCATTACCAGGAAGGCAGTATGTTTCGGTACGTGGAATAGTATGCAATTCGCTTTCTACGTGGAAGATTCTGGATTGTGGTTTGTGGGGGGATTTTGTAAATTAGGTGACATTGCTTTAAATCCAAAGGAATGACGCTGATGTTGTTGTAGACTCTTAAAGGGTATAGGTTCACATCTTCTTAGATTTGGGGAGGGATTATCAACCTTGGCTTTTGTTTAAAAGGCTTGAATCTGCTATATCCTGTTATCTTCTTCGTTTTTAAATCATGGGCTGCACTTAACCTTTTGTCGTGCTTTGATAATCGATTTGTTAAAAGTGTATACTGATCTACAATGTGAAATACTGAAATTAATAAGTTTCAGTTCATTTTTAGAAGTACTTCTACAAAAGAGCATTTTTCTATAGTGCGGGCACACACACACACACACTTACACAACCCAAAAAGAAAGAGAGAGAAGAAGAGAAACCAAGAGAGTTAACTTTGGCCATTTGGTTGGAAATGGAAACTTACTTAAGTTTATTGTTCAATGCAGCTGGCACAAATTCTCACAGGTCACGCGAACCAAAATACAAAATTGAGTTCCACTCAGAAGACTCGCCATATCTTCCTGTAAGCAAGCTGATAAAAGTGTAGATTTTGGGGCTATTATGAACCTTTTGTCCGTATTTGGGTTGTGTATGATTCTTGCTGCACTGCTGGCTACTTTTTGGAGTTGGTTGACTTAGTTTATTCTTTATTCTTTCTTGACTAAGGATCAAATAAGTCTCCGTCATATTCTATGTTGAGATTGTTTTCAAGGATTTTCACTCTAATGTCAACCAGTAACTGATTCTGCTACCCCTAGCACAGGTCCCAGTACTAATGCTGAGAACATACTATCTCTTGGCTTGTTTTCTAACTCCTGAGAAGCTATGGGGTGACTGGTGGTATTGGATTATTAGATATGAAACTGCAAAAGCATGGACTTAGTCTAAGTTATTTTCTATGACTCTGTAGTTGGACCTGTAGATTTCTCTAATTCTTTTTTTAGGAAAATTTGTGGCTTTTATTCCTGAAAATTTATTACTTTAGATGTAGTCCGAACTCTTAAGTTAAGCAGTCTATTGTTTTATGCAATCCAGTGCTTTAAAGTGAACTTGCCGCATCTGGCGCAGCAATTTCTTGACCTCAGATATAGGGTTATAAACAGCTCTAATCTCACAGTTAGCTGAGTGTTAATTGTTGTTCAGCTATATTAGGTAGTTTTCTAATTTGGCAACTCTCAAAACCTTTTCTTAAATTGAGGCCACACAATAGAAAATAATTCCATATACTTACAGCAATAGCCGACCTCATTTTCCTTCCATTCACACACTCTTAACACTCTCACACAATCAAATATAATTCTACCTTGAGCAGCATCCATTTACATGATAATTGTTGGCTGAACAATTTGGCATGTACTTCCTTCTTCTGTGTGGATCTACTTAATGATTGATAATGTTGTTTCTTGACAATGATATGCAGGGTGATGACCAAGAGTCTATCTTCATGCCAAATGAAGATGGGAAGAATTATTTGTGCTTTCTACCCAAGATTGAGAAACCTAAGAGTGGAAAGCCAGTCAGCCAATATAATACTACTGGCATGATCATGGAAAGTGAGAGAAGGATCAAAGTAAAGACACCAGATGAGCTACTTGAAGTACTGGAAGATCAATGCCTTCTCAGGGTCAGTATCAAGACCTTTTCATGTGAAATCTATGTTATAATGACTCTTCATTTTATCCTAATTATCTTGATACTTAGACTTCGATATGAAATCCTAAACTGATAGTTGATATCCTGATTTTCACCTTGACAACTCACATCTTGAATGACTTGTTGGTAGATACTAATACAAAAACTGTGGATTGTTACATCTTTAAAACAGGGCATGAGGGAAGTACTTATAACTTTTTTTAGCAAACTAGTCAACCTGAAGCTCAATATTTTTTATTTTTGTATCTGTAACATGTAAGGCATTTGCAAAAGTCATAAGAATCGGGATATTTATATACTTGTCCCTGTATCCTTAAGTGTGAACCATATCCTACAACCGTGTCCAAAATTTCAAAATGTGTCCCTGTATTCTAAAGTTTTAAGCCATCTCATTTCATATACTCGAATACCTACACTTTTGGACGTAACCCCATGTATAATATGAGTAACTCAGCGTGAAATAGATAGGTTCTTATGGCATCTCCTGTTAGGCATCTATTATATACTAATGAGACTTTTGAAGCTGCCTTTAACAGTTAGAAGAAAGAAAGTGGCTCCACTATTATCTCCCCTCCCCCCTGCATTATTACTTTGTTTTTGTGTGTGCATGTGTGTGGGTAGGGGTCTAGTCTTTGCTCTTGCAGAAGGTCATCTTCTTTTCTTTCTGCAATTTTTCTGTATCATGTGGTAATTGATGGAAGTTGAGACCTTGTTTCCCCCTTTTCTTGCAGCAAGAGGGTTGGTGGACATATGAATTCTGTTTTAAGAATAAACTACGGCAGCTTCATTTGGAAGATGATAAGGTAGACAACTAACTATCTCTTGGTTTATTGCTTTTACGATCTTTAGTGTTCCTGCTAATTATGTTACTGATTTTGTCCTGGTGTTACTATACTGGAATAGTTTGGTCATTTTGGATTACTTTTTGATTCATGGAAGAATGAAATTAGAACAATGAAGAAGTTGTTTTTATTAAATTGACAGCCTCTTAATTTCGAAGACACGTAGCAGGAGTTGGCTTGTTTTCTGATTATTCGTTGGTGGCAATTCCTTTCCTGAGCTTTATCCACAGTTGCCTCTGATATTCTATTTCTTGACGCAAATAGATTTTCGGGCATAGTTAAAAAAATTATGCCTTGGCTTTTGCCCTACTTTTGTAATGCCTTGGACTCTTGGAGTGTCATTGTCTGGAGCCAATTTTTAGTTAACTTCTATTTTTTTGTATCTTACGGAGTATTTTGTTTTTCCCTTTTCCAATACAACTGTCTGCTAATCACTCCATAGAATTAGATGACAACGGGAGCTTTAATTTTATTCTGAGCTCAATTATTACTCTGATATTTACAAACTTACGAGTATTCCGTAGTGGCGTAGTGCATTCATACTTTGTGTGGTTATACAGATAGCTCAAGAGTTTGTGCTGGGAGTATATGATCCTGAAGCTACAACTCTTAATAATCAGAATCTCTCTGACATTTCTATATTGAAAGATCCACATTCAAAAGATGCTTCTCAGAGGTATGATAACTTATAAGCGTATTAGCTGAATTATAATTTTACTGCTTGATATAAATGCTACTGGAGTGATGGTCTGAGCTATGCAGGTATCATGCTCATCAGTACACCAATGGAACAGTCTGTGACCTTACGAATCAACATCGAGAGACAGAGGTATGAAACGCATTTACAATTTTATTCTTCATCTGTGCTCATTGTTAAATATTTTCCTTTTCCAACACAGGTTAGATTTGTGTGTTCAGAGGGCAAAGCCATGATTAGCTCCATTACAGAGTTATCCACCTGTAAATACGCACTTACAGTTCAGTTTCCGATGCTTTGTTCACACCCGTGAGTCTTTCTCTCTCTTTCTCACTGGCGCAATGTTTTCACTACTTCTAGTTACTCATCCCCTTCTGTCCAGAATTATTTGTCATACTGTTTTAGGATGTATGAAAAAAGTTGCCACCTTTCCTCGTAAAGTAATGGTTTATGAATAGAATTTCCTATTTGCTGCTGATATTAGTTGACGGGGAGAGGATAGAATTGTTCAACCATTATAAAGGGTTGTCTTGTAAAATAATGTCACGTTCTTGAGGATGAGGGGGTTAAGTTAATGTGACAACTAATTTTAGATCGAGGGAGTACATTGAATGTTAGTAATATAACTCTGTGAGAGGCGGCTTGTTACATTACTGGTTTTCCTTCTCTTTTGCAGGATGTTTCAAGAAGAGCGGCCTGTTTGGTATGCCATACATTGCAACTTGCTTTCCAAGGATGGCAAAGATATGAAAGCAGAAGAAGATACTGAGCATGACAACAGAATCAAATTGGTCTCGGAAGTTGAATACCCGTTTGACATTGGTGCTGACGAATCTGCTGCGTAAATGTTTTTGTTTAAGTTTTTTACACAGACAGGTACAGGTAGCTAGGGAGGAACTTCGAAAGAAGAAATAGAAATGTTTACTTATAGTGCCAAATGTAGATTGCTGTAATTTTGTAGATTGATGATCCCTTCTACATATCAGTCAAGTTTCTACGTTCATTTGCTTACTAGAAAGGTTCTTTTGTTCCTTGTTTTACCTTGATGTTGATCAAAGAGCTTCTAATTGTTATTCCAGTAGGAACACACACAAGAGGGGGGGGGTGAATTGTAATTAGAACTTTGATAAAGTTTCTTGCGGAACTTAAGAAACAATCAAGGAACTGAGAATAGAGAAGACAATAACAACAATTGTGAAAACTTCTTGATACTAATCAAGAAGAGAATTCTTTTATTATGGTAATGCCTCGATTACAATAATCTCTCC AAATGACGTGGCAATCTCAAATGCCCAATAGGACCCATACCCGGTTACAATTTGATGACCCAAATAAAAAACAAAATTAAGTTGACGGACCCAATCAACACCTACTTCGGTTCTTCATCTCTCTTCTTCTCGGAAGAATTAATTCTGGGTTTGATTTTGATCAAAATTAGCGAAGATGAGATTTTGTTGGTTAATCATCGCTCCATTTTTCCTGTATTTCGTAACCCTGAAAATTTCAGGTGATTCAGTAATCACAGCTCAAGGAGCTGGCACAAATTCTCACAGGTCACGCGAACCAAAATACAAAATTGAGTTCCACTCAGAAGACTCGCCATATCTTCCTGGTGATGACCAAGAGTCTATCTTCATGCCAAATGAAGATGGGAAGAATTATTTGTGCTTTCTACCCAAGATTGAGAAACCTAAGAGTGGAAAGCCAGTCAGCCAATATAATACTACTGGCATGATCATGGAAAGTGAGAGAAGGATCAAAGTAAAGACACCAGATGAGCTACTTGAAGTACTGGAAGATCAATGCCTTCTCAGGCAAGAGGGTTGGTGGACATATGAATTCTGTTTTAAGAATAAACTACGGCAGCTTCATTTGGAAGATGATAAGATAGCTCAAGAGTTTGTGCTGGGAGTATATGATCCTGAAGCTACAACTCTTAATAATCAGAATCTCTCTGACATTTCTATATTGAAAGATCCACATTCAAAAGATGCTTCTCAGAGGTATCATGCTCATCAGTACACCAATGGAACAGTCTGTGACCTTACGAATCAACATCGAGAGACAGAGGTTAGATTTGTGTGTTCAGAGGGCAAAGCCATGATTAGCTCCATTACAGAGTTATCCACCTGTAAATACGCACTTACAGTTCAGTTTCCGATGCTTTGTTCACACCCGATGTTTCAAGAAGAGCGGCCTGTTTGGTATGCCATACATTGCAACTTGCTTTCCAAGGATGGCAAAGATATGAAAGCAGAAGAAGATACTGAGCATGACAACAGAATCAAATTGGTCTCGGAAGTTGAATACCCGTTTGACATTGGTGCTGACGAATCTGCTGCGTAAATGTTTTTGTTTAAGTTTTTTACACAGACAGGTACAGGTAGCTAGGGAGGAACTTCGAAAGAAGAAATAGAAATGTTTACTTATAGTGCCAAATGTAGATTGCTGTAATTTTGTAGATTGATGATCCCTTCTACATATCAGTCAAGTTTCTACGTTCATTTGCTTACTAGAAAGGTTCTTTTGTTCCTTGTTTTACCTTGATGTTGATCAAAGAGCTTCTAATTGTTATTCCAGTAGGAACACACACAAGAGGGGGGGGGTGAATTGTAATTAGAACTTTGATAAAGTTTCTTGCGGAACTTAAGAAACAATCAAGGAACTGAGAATAGAGAAGACAATAACAACAATTGTGAAAACTTCTTGATACTAATCAAGAAGAGAATTCTTTTATTATGGTAATGCCTCGATTACAATAATCTCTCC ATGAGATTTTGTTGGTTAATCATCGCTCCATTTTTCCTGTATTTCGTAACCCTGAAAATTTCAGGTGATTCAGTAATCACAGCTCAAGGAGCTGGCACAAATTCTCACAGGTCACGCGAACCAAAATACAAAATTGAGTTCCACTCAGAAGACTCGCCATATCTTCCTGGTGATGACCAAGAGTCTATCTTCATGCCAAATGAAGATGGGAAGAATTATTTGTGCTTTCTACCCAAGATTGAGAAACCTAAGAGTGGAAAGCCAGTCAGCCAATATAATACTACTGGCATGATCATGGAAAGTGAGAGAAGGATCAAAGTAAAGACACCAGATGAGCTACTTGAAGTACTGGAAGATCAATGCCTTCTCAGGCAAGAGGGTTGGTGGACATATGAATTCTGTTTTAAGAATAAACTACGGCAGCTTCATTTGGAAGATGATAAGATAGCTCAAGAGTTTGTGCTGGGAGTATATGATCCTGAAGCTACAACTCTTAATAATCAGAATCTCTCTGACATTTCTATATTGAAAGATCCACATTCAAAAGATGCTTCTCAGAGGTATCATGCTCATCAGTACACCAATGGAACAGTCTGTGACCTTACGAATCAACATCGAGAGACAGAGGTTAGATTTGTGTGTTCAGAGGGCAAAGCCATGATTAGCTCCATTACAGAGTTATCCACCTGTAAATACGCACTTACAGTTCAGTTTCCGATGCTTTGTTCACACCCGATGTTTCAAGAAGAGCGGCCTGTTTGGTATGCCATACATTGCAACTTGCTTTCCAAGGATGGCAAAGATATGAAAGCAGAAGAAGATACTGAGCATGACAACAGAATCAAATTGGTCTCGGAAGTTGAATACCCGTTTGACATTGGTGCTGACGAATCTGCTGCGTAA MRFCWLIIAPFFLYFVTLKISGDSVITAQGAGTNSHRSREPKYKIEFHSEDSPYLPGDDQESIFMPNEDGKNYLCFLPKIEKPKSGKPVSQYNTTGMIMESERRIKVKTPDELLEVLEDQCLLRQEGWWTYEFCFKNKLRQLHLEDDKIAQEFVLGVYDPEATTLNNQNLSDISILKDPHSKDASQRYHAHQYTNGTVCDLTNQHRETEVRFVCSEGKAMISSITELSTCKYALTVQFPMLCSHPMFQEERPVWYAIHCNLLSKDGKDMKAEEDTEHDNRIKLVSEVEYPFDIGADESAA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo12417.1 vs. NCBI nr
Match: gi|902147089|gb|KNA05127.1| (hypothetical protein SOVF_193240 [Spinacia oleracea]) HSP 1 Score: 622.5 bits (1604), Expect = 3.900e-175 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 1
BLAST of Spo12417.1 vs. NCBI nr
Match: gi|731352995|ref|XP_010687838.1| (PREDICTED: protein OS-9 homolog [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 520.0 bits (1338), Expect = 2.700e-144 Identity = 245/299 (81.94%), Postives = 272/299 (90.97%), Query Frame = 1
BLAST of Spo12417.1 vs. NCBI nr
Match: gi|296084547|emb|CBI25568.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 407.5 bits (1046), Expect = 2.000e-110 Identity = 190/297 (63.97%), Postives = 240/297 (80.81%), Query Frame = 1
BLAST of Spo12417.1 vs. NCBI nr
Match: gi|359484685|ref|XP_002262947.2| (PREDICTED: protein OS-9 homolog [Vitis vinifera]) HSP 1 Score: 407.5 bits (1046), Expect = 2.000e-110 Identity = 190/297 (63.97%), Postives = 240/297 (80.81%), Query Frame = 1
BLAST of Spo12417.1 vs. NCBI nr
Match: gi|590578861|ref|XP_007013626.1| (OS-9 [Theobroma cacao]) HSP 1 Score: 406.4 bits (1043), Expect = 4.400e-110 Identity = 192/273 (70.33%), Postives = 226/273 (82.78%), Query Frame = 1
BLAST of Spo12417.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCY7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_193240 PE=4 SV=1) HSP 1 Score: 622.5 bits (1604), Expect = 2.700e-175 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 1
BLAST of Spo12417.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BMY3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g193040 PE=4 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 1.900e-144 Identity = 245/299 (81.94%), Postives = 272/299 (90.97%), Query Frame = 1
BLAST of Spo12417.1 vs. UniProtKB/TrEMBL
Match: F6HCH7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00500 PE=4 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 1.400e-110 Identity = 190/297 (63.97%), Postives = 240/297 (80.81%), Query Frame = 1
BLAST of Spo12417.1 vs. UniProtKB/TrEMBL
Match: A0A061GN28_THECC (OS-9 OS=Theobroma cacao GN=TCM_038204 PE=4 SV=1) HSP 1 Score: 406.4 bits (1043), Expect = 3.100e-110 Identity = 192/273 (70.33%), Postives = 226/273 (82.78%), Query Frame = 1
BLAST of Spo12417.1 vs. UniProtKB/TrEMBL
Match: A0A0D2MWJ2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G109500 PE=4 SV=1) HSP 1 Score: 398.7 bits (1023), Expect = 6.400e-108 Identity = 186/262 (70.99%), Postives = 219/262 (83.59%), Query Frame = 1
BLAST of Spo12417.1 vs. ExPASy Swiss-Prot
Match: OS9_ARATH (Protein OS-9 homolog OS=Arabidopsis thaliana GN=OS9 PE=1 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 2.600e-78 Identity = 143/265 (53.96%), Postives = 187/265 (70.57%), Query Frame = 1
BLAST of Spo12417.1 vs. ExPASy Swiss-Prot
Match: OS9_ORYSJ (Protein OS-9 homolog OS=Oryza sativa subsp. japonica GN=OS9 PE=2 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 6.900e-71 Identity = 137/283 (48.41%), Postives = 187/283 (66.08%), Query Frame = 1
BLAST of Spo12417.1 vs. ExPASy Swiss-Prot
Match: OS9_BOVIN (Protein OS-9 OS=Bos taurus GN=OS9 PE=2 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 9.400e-20 Identity = 51/142 (35.92%), Postives = 77/142 (54.23%), Query Frame = 1
BLAST of Spo12417.1 vs. ExPASy Swiss-Prot
Match: OS9_HUMAN (Protein OS-9 OS=Homo sapiens GN=OS9 PE=1 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.200e-19 Identity = 51/142 (35.92%), Postives = 76/142 (53.52%), Query Frame = 1
BLAST of Spo12417.1 vs. ExPASy Swiss-Prot
Match: OS9_MOUSE (Protein OS-9 OS=Mus musculus GN=Os9 PE=1 SV=2) HSP 1 Score: 94.0 bits (232), Expect = 3.000e-18 Identity = 52/143 (36.36%), Postives = 78/143 (54.55%), Query Frame = 1
BLAST of Spo12417.1 vs. TAIR (Arabidopsis)
Match: AT5G35080.1 (INVOLVED IN: biological_process unknown) HSP 1 Score: 293.5 bits (750), Expect = 1.500e-79 Identity = 143/265 (53.96%), Postives = 187/265 (70.57%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo12417.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo12417.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo12417.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo12417.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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