Spo12408 (gene)

Overview
NameSpo12408
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionMetal-dependent phosphohydrolase HD domain-containing protein
LocationSpoScf_02058 : 19994 .. 24461 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCACGTGGCTCCTTCTGTCCGTTGGGACCAGCTGCTACAATGTCATCTGCAATTCTGGTGTGCACCTCTGGTGGGTTTGTTACACACTGTTTTCCATGGCACTCAGATCTATCTGGGGATAGTGAGTATGAAACTGGTAGTTCCCTGTTGAAGCACACCAGTTTAAGGAGGAGCATGGGAGTATAGTACGTATACACCTATTTGAAGGGGAGCGTAGGAGGGAATAGTACATCCTTTACTCTTCTGATTCTTGGTATTCTGTAGACTTTCGCTTCCTTTTCAACCACATTAACTTTGCCTCTTTTTACAACTCGTTGATGTGAGTTTGTAGTTGAACTATGAGCTTATTTGCAGGATTTTAAGTGTCTTTCCAGTATTTAAAGTGTACGGAGTATTTTTTAATGTTAGGCAGTTGGTTGATGGGTAATGGACATGGACCATTTTGTTAGCTTGTACTCCATAGAATTTTGTTCATTGAAGTGTTTCTCATTGAGGTAACACTACTCTATATTACTTGTACGTCTCAAGGTCGTTTATGTATTAGGATATCTGGGTTCAAGGTTAGGTGTAAGGTTTAAGGTTACATTTAAACTTGTCCGTTAGTCTGAGAATCTGTAAGTGCTTGAGCAATGGAAATCTCAAATATGCTCTTCTTTCCTTGTCTTTTTTTTCCCTATCAGTATCCTATAAATCCAGTAGACAGTAAAGGGGCAACAAAAGGTGCTTGTTTTTACCCCCTCATTCCATTTTCCCGGATGAATGGCACACATATCTCCTGTTCTTCAAGCTTAATTTTAGGAAAATGTCTTTCCTTAATGGCATGACAAGGTTAACAGTAATATTGGCCCCTAATTGGGAGTAGCATCTGTTATGGGATGGAGGGAACTGTAAGATGCAATGTGTGGTTCGAGGTGCTGCAATAAATTGACTATCAATCACAAGTATGCATATTTTTCATTAACACGTTGTTTGGATAAGAGGAAATGGAACGTAAGGGAGGTTAGGGAAGGGAAAGGAAAGAGAGGGGAACTAGCTCTCTTGTTTGGATAGGGGGTGGAGTGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAAGGGGAGGAAGAGGAAGGATCCATATTCCCTCCCTCTTTAAGAAACATAATCCCTCCAAAGTTGGAGTGATTTGGACGGAAAATGGAGCTCCACCTTCCCTAGTTATCCAAACAAGTTTATCNAAGTTGGAGTGATTTGGACGGAAAATGGAGCTCCACCTTCCCTAGTTATCCAAACAAGTTTATCTTAATATCCTCAAGGCTAGAATTTTACCTTGTAGAAAAAACATTCATGAGACAGGATAAGCAAAGGTGACAGAGTGAAACAGGGTAGGCAAAGGCGTTATTTGTGCAAAACTGCAAATTAGGCAAGGTCTTTAGGTGATGCTGCTTTAACATATGTATTTGTCCTGTGATTATCAGTGTATTCACCTGATAAATGAGTATTAGTAACAACCGTTTTATTGCTCTCCTTCAACTTCTATATAACGTGTTGCTGTTTCTCCTTAAGTTTGATACAATTTCTCTTTTCCCCCCCTCCCTTTTCAGCAATTGTTGGTGATATTACACCTTGCGATGGGATTTCCAAGATGGAAAAGAACCGTAGAGAAAGTGAAGCACTTGACCATATGTGCAATCTCCTTGGTGGAGGATCGAGAGGTTCTTTCTGTGCTTTACTCTCATGCTGTTTCATTGTGTACTCTATTTCTGATGGATGTGGTGGTGGGGTCATGGAGGGGGAAGGAAAGACATATCAACCCCTTCCATTCATTTCCTTAGTGGAATATCCACAAGGGTTCCCTTGTTTCTTGATTGTTTGTGTTTCCTGAGCTATATTTACAAATTGCAGCCAACGAAATACATGATTTATGGATGGAGTATGAAGAAGGCGCATCACTCGAAGCAAAGGTTGTCAAGGATTTCGACAAAGTGCGTTCTACTTCTACGCTTTTCCCAACAATTTCCATTCTTTTGTGTCCTCTAAAATCACACTCCTTATTTTGTGCCATTGCATTGAGACTTTTGTTGTCTGGACATCAACTTTTATTGGTAAATGCATAATGCCATTTTCCTTAGGCTTCTGGCTGTATATGATAGAGATCTTCTAAGTTCTAGCTAGATCTATAATCATATGAATATGCAAAATGGCAAGTCATCTTTAAGACTTGTGTGGTGTAATGTGCCCTGTTTCATTTGCATCATATTATGGCTATATGTTAATGCATATTATACAGAGTAGTAATGTTACTGAACAAAGAAATTCGTGTTTTTTTCTTCACTAATCACTATAGCATATTATGCAGAGCAGTAATTATACCATGGTCCTTTGGAGGTTATTTTTCTACTGAACAAAGAAATTCGTGGTTTTTTCTTCACTAATCACTATATGTTAAAGCATATTATGCAGAGTAGTAATTATACCATGGTTCTGTGGAGGTTATTTAATCTTCCTCTTGTTTCTTATTTCCCTTTCCACTCTTCTTTGTTTCTTTTGAATGAGCAGGATGTATTACCACCGAAAATTTTGGGCATATTTGAATGTGCCCTTTTTTTCTTTTGTTAGTTCGGCAGCTAAATCATTGCATTAGAATAGATACCTAAAAGGTGTTTGTTGTATCATTGCATCACAAAATTTATTGTTTTCTTGCCATGTTATCAATTTATCACAGCAGCACAACTGAAACATTGGTCTGAAAATTGGTAGATTATGAAAGCGATTTGGATACTGAAAAATTGGATATAATCATTTGAGTAAAACCAAGTTCTCGTATAACTAACTATATAAGGTTATTGTTTGGTGTCTTGTTGTCATTCTAACATACCTTTTTTTTTTGGGTATTTCCTTCAGTTGGAGATGATACTTCAGGCGTCAGAGTATGAAAAAGGTGAGGCTGTCAGCAAAAGTGGTGATAAAAAACAATGGCAATGTTCGCTTTATTTAGCTAAATAAAAATGGTGCAAGAATCTTGTTTATGCTAGTATTACTGGTTTAAGTCAGGAAGGATGCTGAAATTTCTAATGGTTAATTACTCTTCTTTGCTCCTCTTTGAGATGCCATGTGCATTGAACTGCTAGGAGGCTTTTTAGCTAGTGGGAGTATTTCACTACTTTGCTCCTCTCTGGAAATTAATGTACTGCTTCTTGTTCTTTTTTGTCCTTGCACAGAACAAGGGAAGGATTTGGAGGAGTTTTTTCAGTCCACTGCTGGTAGGTTGATTCAACCTTCTTGTTCATACATACTTTCTGCAAGAATGTGGCAGTTTATTTATTTCTTCTAATATAAAAACTGTTGCTTGCTGGCTTACTACTATATGAGCTTCGGATTTGACAATACACCTATGCTTCTACCTTCACTGTGCGTAACATAGACACCGATATTTGGGTTTATCAACAGCCTGTTTGGTATAGGGGATCAGTTAAGGTAGTATCATGATGCATGAATGCCCTTAATAATACATCTGCTCTGACTAATCAATATTTTTCTTTTATCCTTTGTGTAACTGTATTTACACTAACGGAGCATTACTAGTAATGTGGTAATGAATGGATAGATATTAACTAAGAAAAAAAACTAGTTTGGGAGCTATGCGTAATACCATTTTACCAGACATTACATGGGGAATTCTTCGTGAAGTTACACAAACTGATTACTTGGCGGTAAACGAGTTAGCTTGTTTGAGATCATGCCAAACCCATCCTGTGGGACTTGCGTTTGGAACAAGATTAATGTATATCATAAGCATGGTTAATTTTATTAGGAAAAGGTGATACTATTTTTTGTTTAGACGCTCTGGTATATTAGGAAAAAGGAGTAGATTTTCTTCATTGAAATTGGTCCTCGGCTCATTAACTTTCAGAAAATTAAGGGATCACGAGCTCTTATTTTCACATTTTCTTCATTTTGCTAAGAGCCTTAGATTAGATGATGTAATCTCTAATTTGATTTGCTGAAATGACTCTTGTTTGCAGGGAAATTCCAGACTGATATCGGCAAAGCATGGGCATTGGAGATAGCATCAAGAAGAAATAAAAACTAAGTAGAGCAGCAGCATTTTTCAGCCTGCTTGGAGCTTTGCTTTGCAACATCATAAGGTCTGATGCTTTACATGTTCAGTTCATTTAAATATCATTAGAAGCTGGTGGTCTCAGGACAGTTGTTATTCTGAGGAAAATGTGCTTTGTCAACTAGTCTATGACTAATGCAGTAATGCTAGCACTAATTCAAGAGAACTCCATCAACATTGGTTATTGATTTTACGTCTTTTCTGTATCGACATCTTATTTGAGAGCATCTTATTGACAAAATGAAGCCCTTTGTGTACATTCTAGTTACAGGGAATTGAACCTCGAACACTGAGGTTGGATTGTTGGAAGGTGCCTTTCTTTCTGTTA

mRNA sequence

ATGCCACGTGGCTCCTTCTGTCCGTTGGGACCAGCTGCTACAATGTCATCTGCAATTCTGGTGTGCACCTCTGGTGGGTTTGTTACACACTGTTTTCCATGGCACTCAGATCTATCTGGGGATAGTGAGTATGAAACTGCAATTGTTGGTGATATTACACCTTGCGATGGGATTTCCAAGATGGAAAAGAACCGTAGAGAAAGTGAAGCACTTGACCATATGTGCAATCTCCTTGGTGGAGGATCGAGAGCCAACGAAATACATGATTTATGGATGGAGTATGAAGAAGGCGCATCACTCGAAGCAAAGGTTGTCAAGGATTTCGACAAATTGGAGATGATACTTCAGGCGTCAGAGTATGAAAAAGAACAAGGGAAGGATTTGGAGGAGTTTTTTCAGTCCACTGCTGGGAAATTCCAGACTGATATCGGCAAAGCATGGGCATTGGAGATAGCATCAAGAAGAAATAAAAACTAAGTAGAGCAGCAGCATTTTTCAGCCTGCTTGGAGCTTTGCTTTGCAACATCATAAGGTCTGATGCTTTACATGTTCAGTTCATTTAAATATCATTAGAAGCTGGTGGTCTCAGGACAGTTGTTATTCTGAGGAAAATGTGCTTTGTCAACTAGTCTATGACTAATGCAGTAATGCTAGCACTAATTCAAGAGAACTCCATCAACATTGGTTATTGATTTTACGTCTTTTCTGTATCGACATCTTATTTGAGAGCATCTTATTGACAAAATGAAGCCCTTTGTGTACATTCTAGTTACAGGGAATTGAACCTCGAACACTGAGGTTGGATTGTTGGAAGGTGCCTTTCTTTCTGTTA

Coding sequence (CDS)

ATGCCACGTGGCTCCTTCTGTCCGTTGGGACCAGCTGCTACAATGTCATCTGCAATTCTGGTGTGCACCTCTGGTGGGTTTGTTACACACTGTTTTCCATGGCACTCAGATCTATCTGGGGATAGTGAGTATGAAACTGCAATTGTTGGTGATATTACACCTTGCGATGGGATTTCCAAGATGGAAAAGAACCGTAGAGAAAGTGAAGCACTTGACCATATGTGCAATCTCCTTGGTGGAGGATCGAGAGCCAACGAAATACATGATTTATGGATGGAGTATGAAGAAGGCGCATCACTCGAAGCAAAGGTTGTCAAGGATTTCGACAAATTGGAGATGATACTTCAGGCGTCAGAGTATGAAAAAGAACAAGGGAAGGATTTGGAGGAGTTTTTTCAGTCCACTGCTGGGAAATTCCAGACTGATATCGGCAAAGCATGGGCATTGGAGATAGCATCAAGAAGAAATAAAAACTAA

Protein sequence

MPRGSFCPLGPAATMSSAILVCTSGGFVTHCFPWHSDLSGDSEYETAIVGDITPCDGISKMEKNRRESEALDHMCNLLGGGSRANEIHDLWMEYEEGASLEAKVVKDFDKLEMILQASEYEKEQGKDLEEFFQSTAGKFQTDIGKAWALEIASRRNKN
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo12408.1Spo12408.1mRNA


Homology
[Close]
BLAST of Spo12408.1 vs. NCBI nr
Match: gi|902157234|gb|KNA06105.1| (hypothetical protein SOVF_184100 [Spinacia oleracea])

HSP 1 Score: 224.6 bits (571), Expect = 1.300e-55
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 1 

		  

Query: 47  AIVGDITPCDGISKMEKNRRESEALDHMCNLLGGGSRANEIHDLWMEYEEGASLEAKVVK 106
           AIVGDITPCDGISKMEKNRRESEALDHMCNLLGGGSRANEIHDLWMEYEEGASLEAKVVK
Sbjct: 134 AIVGDITPCDGISKMEKNRRESEALDHMCNLLGGGSRANEIHDLWMEYEEGASLEAKVVK 193

Query: 107 DFDKLEMILQASEYEKEQGKDLEEFFQSTAGKFQTDIGKAWALEIASRRNKN 159
           DFDKLEMILQA EYEKEQGKDLEEFFQSTAGKFQTDIGKAWALEIASRRNKN
Sbjct: 194 DFDKLEMILQALEYEKEQGKDLEEFFQSTAGKFQTDIGKAWALEIASRRNKN 245
[Close]
BLAST of Spo12408.1 vs. NCBI nr
Match: gi|731352710|ref|XP_010687679.1| (PREDICTED: HD domain-containing protein 2 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 201.8 bits (512), Expect = 8.700e-49
Identity = 98/112 (87.50%), Postives = 105/112 (93.75%), Query Frame = 1 

		  

Query: 47  AIVGDITPCDGISKMEKNRRESEALDHMCNLLGGGSRANEIHDLWMEYEEGASLEAKVVK 106
           AIVGDITPCDGISKMEKNRRE EALDHMCN+LGGGSRA EI+ LWMEYEE +SLEAK+VK
Sbjct: 96  AIVGDITPCDGISKMEKNRREKEALDHMCNVLGGGSRAKEIYALWMEYEESSSLEAKIVK 155

Query: 107 DFDKLEMILQASEYEKEQGKDLEEFFQSTAGKFQTDIGKAWALEIASRRNKN 159
           DFDK+EMILQA EYEKEQGKDLEEFF+STAGKFQTD GKAWALEIASRR K+
Sbjct: 156 DFDKVEMILQALEYEKEQGKDLEEFFESTAGKFQTDTGKAWALEIASRRKKH 207
[Close]
BLAST of Spo12408.1 vs. NCBI nr
Match: gi|731352702|ref|XP_010687675.1| (PREDICTED: HD domain-containing protein 2 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 201.8 bits (512), Expect = 8.700e-49
Identity = 98/112 (87.50%), Postives = 105/112 (93.75%), Query Frame = 1 

		  

Query: 47  AIVGDITPCDGISKMEKNRRESEALDHMCNLLGGGSRANEIHDLWMEYEEGASLEAKVVK 106
           AIVGDITPCDGISKMEKNRRE EALDHMCN+LGGGSRA EI+ LWMEYEE +SLEAK+VK
Sbjct: 100 AIVGDITPCDGISKMEKNRREKEALDHMCNVLGGGSRAKEIYALWMEYEESSSLEAKIVK 159

Query: 107 DFDKLEMILQASEYEKEQGKDLEEFFQSTAGKFQTDIGKAWALEIASRRNKN 159
           DFDK+EMILQA EYEKEQGKDLEEFF+STAGKFQTD GKAWALEIASRR K+
Sbjct: 160 DFDKVEMILQALEYEKEQGKDLEEFFESTAGKFQTDTGKAWALEIASRRKKH 211
[Close]
BLAST of Spo12408.1 vs. NCBI nr
Match: gi|559148716|gb|AHB08880.1| (HD domain-containing protein [Suaeda glauca])

HSP 1 Score: 192.2 bits (487), Expect = 6.900e-46
Identity = 95/111 (85.59%), Postives = 103/111 (92.79%), Query Frame = 1 

		  

Query: 47  AIVGDITPCDGISKMEKNRRESEALDHMCNLLGGGSRANEIHDLWMEYEEGASLEAKVVK 106
           AIVGDITP DGISK+EK+RRE EALD MCNLLGGGSRA EI+DLWMEYEE ++ EAK+VK
Sbjct: 97  AIVGDITPSDGISKIEKSRREKEALDKMCNLLGGGSRAKEIYDLWMEYEECSTPEAKIVK 156

Query: 107 DFDKLEMILQASEYEKEQGKDLEEFFQSTAGKFQTDIGKAWALEIASRRNK 158
           DFDK+EMILQA EYEKEQGKDLEEFF+STAGKFQTDIGKAWALEIASRR K
Sbjct: 157 DFDKVEMILQALEYEKEQGKDLEEFFESTAGKFQTDIGKAWALEIASRRKK 207
[Close]
BLAST of Spo12408.1 vs. NCBI nr
Match: gi|226495659|ref|NP_001148228.1| (uncharacterized protein LOC100281836 precursor [Zea mays])

HSP 1 Score: 189.1 bits (479), Expect = 5.800e-45
Identity = 93/109 (85.32%), Postives = 98/109 (89.91%), Query Frame = 1 

		  

Query: 47  AIVGDITPCDGISKMEKNRRESEALDHMCNLLGGGSRANEIHDLWMEYEEGASLEAKVVK 106
           AIVGDITP D + K EKNRRE EALDHMC LLGGGSRA EI +LWMEYEE ASLEAKVVK
Sbjct: 135 AIVGDITPSDNVPKEEKNRREKEALDHMCELLGGGSRAQEIRELWMEYEENASLEAKVVK 194

Query: 107 DFDKLEMILQASEYEKEQGKDLEEFFQSTAGKFQTDIGKAWALEIASRR 156
           DFDK+EMILQA EYEKEQG+DLEEFFQSTAGKFQTD+GKAWA EIASRR
Sbjct: 195 DFDKVEMILQALEYEKEQGRDLEEFFQSTAGKFQTDLGKAWAAEIASRR 243
[Close]
BLAST of Spo12408.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFU2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_184100 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 8.700e-56
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 1 

		  

Query: 47  AIVGDITPCDGISKMEKNRRESEALDHMCNLLGGGSRANEIHDLWMEYEEGASLEAKVVK 106
           AIVGDITPCDGISKMEKNRRESEALDHMCNLLGGGSRANEIHDLWMEYEEGASLEAKVVK
Sbjct: 134 AIVGDITPCDGISKMEKNRRESEALDHMCNLLGGGSRANEIHDLWMEYEEGASLEAKVVK 193

Query: 107 DFDKLEMILQASEYEKEQGKDLEEFFQSTAGKFQTDIGKAWALEIASRRNKN 159
           DFDKLEMILQA EYEKEQGKDLEEFFQSTAGKFQTDIGKAWALEIASRRNKN
Sbjct: 194 DFDKLEMILQALEYEKEQGKDLEEFFQSTAGKFQTDIGKAWALEIASRRNKN 245
[Close]
BLAST of Spo12408.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BUD6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g191950 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 6.100e-49
Identity = 98/112 (87.50%), Postives = 105/112 (93.75%), Query Frame = 1 

		  

Query: 47  AIVGDITPCDGISKMEKNRRESEALDHMCNLLGGGSRANEIHDLWMEYEEGASLEAKVVK 106
           AIVGDITPCDGISKMEKNRRE EALDHMCN+LGGGSRA EI+ LWMEYEE +SLEAK+VK
Sbjct: 100 AIVGDITPCDGISKMEKNRREKEALDHMCNVLGGGSRAKEIYALWMEYEESSSLEAKIVK 159

Query: 107 DFDKLEMILQASEYEKEQGKDLEEFFQSTAGKFQTDIGKAWALEIASRRNKN 159
           DFDK+EMILQA EYEKEQGKDLEEFF+STAGKFQTD GKAWALEIASRR K+
Sbjct: 160 DFDKVEMILQALEYEKEQGKDLEEFFESTAGKFQTDTGKAWALEIASRRKKH 211
[Close]
BLAST of Spo12408.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BQR4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g191950 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 6.100e-49
Identity = 98/112 (87.50%), Postives = 105/112 (93.75%), Query Frame = 1 

		  

Query: 47  AIVGDITPCDGISKMEKNRRESEALDHMCNLLGGGSRANEIHDLWMEYEEGASLEAKVVK 106
           AIVGDITPCDGISKMEKNRRE EALDHMCN+LGGGSRA EI+ LWMEYEE +SLEAK+VK
Sbjct: 96  AIVGDITPCDGISKMEKNRREKEALDHMCNVLGGGSRAKEIYALWMEYEESSSLEAKIVK 155

Query: 107 DFDKLEMILQASEYEKEQGKDLEEFFQSTAGKFQTDIGKAWALEIASRRNKN 159
           DFDK+EMILQA EYEKEQGKDLEEFF+STAGKFQTD GKAWALEIASRR K+
Sbjct: 156 DFDKVEMILQALEYEKEQGKDLEEFFESTAGKFQTDTGKAWALEIASRRKKH 207
[Close]
BLAST of Spo12408.1 vs. UniProtKB/TrEMBL
Match: V5PZR1_9CARY (HD domain-containing protein OS=Suaeda glauca PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 4.800e-46
Identity = 95/111 (85.59%), Postives = 103/111 (92.79%), Query Frame = 1 

		  

Query: 47  AIVGDITPCDGISKMEKNRRESEALDHMCNLLGGGSRANEIHDLWMEYEEGASLEAKVVK 106
           AIVGDITP DGISK+EK+RRE EALD MCNLLGGGSRA EI+DLWMEYEE ++ EAK+VK
Sbjct: 97  AIVGDITPSDGISKIEKSRREKEALDKMCNLLGGGSRAKEIYDLWMEYEECSTPEAKIVK 156

Query: 107 DFDKLEMILQASEYEKEQGKDLEEFFQSTAGKFQTDIGKAWALEIASRRNK 158
           DFDK+EMILQA EYEKEQGKDLEEFF+STAGKFQTDIGKAWALEIASRR K
Sbjct: 157 DFDKVEMILQALEYEKEQGKDLEEFFESTAGKFQTDIGKAWALEIASRRKK 207
[Close]
BLAST of Spo12408.1 vs. UniProtKB/TrEMBL
Match: A0A0A9V6I5_ARUDO (Pco089793 OS=Arundo donax PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.400e-45
Identity = 94/109 (86.24%), Postives = 98/109 (89.91%), Query Frame = 1 

		  

Query: 47  AIVGDITPCDGISKMEKNRRESEALDHMCNLLGGGSRANEIHDLWMEYEEGASLEAKVVK 106
           AIVGDITP DG+ K EK+RRE EALDHMC LLGGGSRA EIH+LWMEYE  ASLEAKVVK
Sbjct: 10  AIVGDITPSDGVPKEEKSRREKEALDHMCELLGGGSRAQEIHELWMEYEANASLEAKVVK 69

Query: 107 DFDKLEMILQASEYEKEQGKDLEEFFQSTAGKFQTDIGKAWALEIASRR 156
           DFDK EMILQA EYEKEQG+DLEEFFQSTAGKFQTDIGKAWA EIASRR
Sbjct: 70  DFDKAEMILQALEYEKEQGQDLEEFFQSTAGKFQTDIGKAWAAEIASRR 118
[Close]
BLAST of Spo12408.1 vs. ExPASy Swiss-Prot
Match: HDDC2_DANRE (HD domain-containing protein 2 OS=Danio rerio GN=hddc2 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.800e-20
Identity = 54/94 (57.45%), Postives = 68/94 (72.34%), Query Frame = 1 

		  

Query: 48  IVGDITPCDGISKMEKNRRESEALDHMCNLLGGGSRANEIHDLWMEYEEGASLEAKVVKD 107
           IVGDI P D +SK EK+RRE +A+ H+  LL  G R  EI++LW EYE  +S EAK+VK+
Sbjct: 70  IVGDIAPADNVSKAEKHRREKDAMVHITGLLDDGLR-KEIYNLWEEYETQSSPEAKLVKE 129

Query: 108 FDKLEMILQASEYEKEQGKD--LEEFFQSTAGKF 140
            D LEMI+QA EYE+ +GK   L+EFF ST GKF
Sbjct: 130 LDNLEMIIQAHEYEELEGKPGRLQEFFVSTEGKF 162
[Close]
BLAST of Spo12408.1 vs. ExPASy Swiss-Prot
Match: HDDC2_DICDI (HD domain-containing protein 2 homolog OS=Dictyostelium discoideum GN=hddc2 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.400e-17
Identity = 55/114 (48.25%), Postives = 69/114 (60.53%), Query Frame = 1 

		  

Query: 47  AIVGDITPCDGISKMEKNRRESEALDHMCNLLGGGSRANEIHDLWMEYEEGASLEAKVVK 106
           ++VGD TP D I+K EK + E  A+  + N L G     EI DLW EYE+  + EA +VK
Sbjct: 77  SLVGDFTPHDKITKEEKYQLEKNAIIEITNTLSG-EVGKEIFDLWQEYEDCKTNEALLVK 136

Query: 107 DFDKLEMILQASEYEK-----EQGKDLEEFFQSTAGKFQTDIGKAWALEIASRR 156
           DFDK EMILQA EYEK     E    L+ FF ST GKF   + K+ AL++ S R
Sbjct: 137 DFDKFEMILQAYEYEKQPHQLENKIKLQSFFDSTRGKFHHPLFKSLALQLESDR 189
[Close]
BLAST of Spo12408.1 vs. ExPASy Swiss-Prot
Match: HDDC2_BOVIN (HD domain-containing protein 2 OS=Bos taurus GN=HDDC2 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.000e-17
Identity = 52/113 (46.02%), Postives = 69/113 (61.06%), Query Frame = 1 

		  

Query: 48  IVGDITPCDGISKMEKNRRESEALDHMCNLLGGGSRANEIHDLWMEYEEGASLEAKVVKD 107
           IVGDI P D + + EK+RRE EA+  +  LL    +  E+++LW EYE  +S EAK VK 
Sbjct: 84  IVGDIAPADNVPREEKHRREEEAMKQLTQLLPEDLQ-KELYELWEEYETQSSAEAKFVKQ 143

Query: 108 FDKLEMILQASEYEKEQGKD--LEEFFQSTAGKFQTDIGKAWALEIASRRNKN 159
            D+ EMILQASEYE  + K   L++F+ STAGKF          E+ + RN N
Sbjct: 144 LDQCEMILQASEYEDLENKPGRLQDFYDSTAGKFSHPEIVQLVSELEAERNAN 195
[Close]
BLAST of Spo12408.1 vs. ExPASy Swiss-Prot
Match: HDDC2_HUMAN (HD domain-containing protein 2 OS=Homo sapiens GN=HDDC2 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.000e-17
Identity = 54/113 (47.79%), Postives = 69/113 (61.06%), Query Frame = 1 

		  

Query: 48  IVGDITPCDGISKMEKNRRESEALDHMCNLLGGGSRANEIHDLWMEYEEGASLEAKVVKD 107
           IVGDI P D I K EK+RRE EA+  +  LL    R  E+++LW EYE  +S EAK VK 
Sbjct: 83  IVGDIAPADNIPKEEKHRREEEAMKQITQLLPEDLR-KELYELWEEYETQSSAEAKFVKQ 142

Query: 108 FDKLEMILQASEYEKEQGKD--LEEFFQSTAGKFQTDIGKAWALEIASRRNKN 159
            D+ EMILQASEYE  + K   L++F+ STAGKF          E+ + R+ N
Sbjct: 143 LDQCEMILQASEYEDLEHKPGRLQDFYDSTAGKFNHPEIVQLVSELEAERSTN 194
[Close]
BLAST of Spo12408.1 vs. ExPASy Swiss-Prot
Match: HDDC2_MOUSE (HD domain-containing protein 2 OS=Mus musculus GN=Hddc2 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.000e-17
Identity = 54/111 (48.65%), Postives = 68/111 (61.26%), Query Frame = 1 

		  

Query: 48  IVGDITPCDGISKMEKNRRESEALDHMCNLLGGGSRANEIHDLWMEYEEGASLEAKVVKD 107
           IVGDI P D I K EK+RRE EA+  +  LL    R  E+++LW EYE  +S EAK VK 
Sbjct: 78  IVGDIAPADNIPKEEKHRREEEAMKQITQLLPEDLR-KELYELWEEYETQSSEEAKFVKQ 137

Query: 108 FDKLEMILQASEYEKEQGKD--LEEFFQSTAGKFQTDIGKAWALEIASRRN 157
            D+ EMILQASEYE  + K   L++F+ STAGKF          E+ + RN
Sbjct: 138 LDQCEMILQASEYEDLENKPGRLQDFYDSTAGKFSHPEIVQLVSELETERN 187
[Close]
BLAST of Spo12408.1 vs. TAIR (Arabidopsis)
Match: AT2G23820.2 (Metal-dependent phosphohydrolase)

HSP 1 Score: 177.9 bits (450), Expect = 4.700e-45
Identity = 89/111 (80.18%), Postives = 97/111 (87.39%), Query Frame = 1 

		  

Query: 47  AIVGDITPCDGISKMEKNRRESEALDHMCNLLGGGSRANEIHDLWMEYEEGASLEAKVVK 106
           AIVGDITP  GISK EKNRRESEAL+HMC LLGGG RA EI +LW EYEE +S EAKVVK
Sbjct: 145 AIVGDITPSCGISKEEKNRRESEALEHMCKLLGGGERAKEIAELWREYEENSSPEAKVVK 204

Query: 107 DFDKLEMILQASEYEKEQGKDLEEFFQSTAGKFQTDIGKAWALEIASRRNK 158
           DFDK+E+ILQA EYE++QGKDLEEFFQSTAGKFQT+IGKAWA EI SRR K
Sbjct: 205 DFDKVELILQALEYEQDQGKDLEEFFQSTAGKFQTNIGKAWASEIVSRRRK 255
[Close]
BLAST of Spo12408.1 vs. TAIR (Arabidopsis)
Match: AT1G26160.1 (Metal-dependent phosphohydrolase)

HSP 1 Score: 156.0 bits (393), Expect = 1.900e-38
Identity = 77/109 (70.64%), Postives = 89/109 (81.65%), Query Frame = 1 

		  

Query: 47  AIVGDITPCDGISKMEKNRRESEALDHMCNLLGGGSRANEIHDLWMEYEEGASLEAKVVK 106
           AIVGDITP DG+ K EK+RRE+ AL  MC +LGGG RA EI +LW+EYE  ASLEA +VK
Sbjct: 141 AIVGDITPSDGVPKEEKSRRETAALKEMCEVLGGGLRAEEITELWLEYENNASLEANIVK 200

Query: 107 DFDKLEMILQASEYEKEQGKDLEEFFQSTAGKFQTDIGKAWALEIASRR 156
           DFDK+EMILQA EYE E GK L+EFF STAGKFQT+IGK+WA EI +RR
Sbjct: 201 DFDKVEMILQALEYEAEHGKVLDEFFISTAGKFQTEIGKSWAAEINARR 249
The following BLAST results are available for this feature:
BLAST of Spo12408.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902157234|gb|KNA06105.1|1.3e-5599.1hypothetical protein SOVF_1841... [more]
gi|731352710|ref|XP_010687679.1|8.7e-4987.5PREDICTED: HD domain-containin... [more]
gi|731352702|ref|XP_010687675.1|8.7e-4987.5PREDICTED: HD domain-containin... [more]
gi|559148716|gb|AHB08880.1|6.9e-4685.5HD domain-containing protein [... [more]
gi|226495659|ref|NP_001148228.1|5.8e-4585.3uncharacterized protein LOC100... [more]
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BLAST of Spo12408.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QFU2_SPIOL8.7e-5699.1Uncharacterized protein OS=Spi... [more]
A0A0J8BUD6_BETVU6.1e-4987.5Uncharacterized protein OS=Bet... [more]
A0A0J8BQR4_BETVU6.1e-4987.5Uncharacterized protein OS=Bet... [more]
V5PZR1_9CARY4.8e-4685.5HD domain-containing protein O... [more]
A0A0A9V6I5_ARUDO2.4e-4586.2Pco089793 OS=Arundo donax PE=4... [more]
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BLAST of Spo12408.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
HDDC2_DANRE3.8e-2057.4HD domain-containing protein 2... [more]
HDDC2_DICDI1.4e-1748.2HD domain-containing protein 2... [more]
HDDC2_BOVIN3.0e-1746.0HD domain-containing protein 2... [more]
HDDC2_HUMAN3.0e-1747.7HD domain-containing protein 2... [more]
HDDC2_MOUSE3.0e-1748.6HD domain-containing protein 2... [more]
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BLAST of Spo12408.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G23820.24.7e-4580.1Metal-dependent phosphohydrola... [more]
AT1G26160.11.9e-3870.6Metal-dependent phosphohydrola... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006674HD domainGENE3D1.10.3210.10coord: 47..157
score: 2.0
IPR006674HD domainPFAMPF13023HD_3coord: 47..146
score: 1.7
NoneNo IPR availablePANTHERPTHR11845UNCHARACTERIZEDcoord: 47..158
score: 8.8
NoneNo IPR availablePANTHERPTHR11845:SF15SUBFAMILY NOT NAMEDcoord: 47..158
score: 8.8
NoneNo IPR availableunknownSSF109604HD-domain/PDEase-likecoord: 47..150
score: 1.88

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0042742 defense response to bacterium
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006364 rRNA processing
biological_process GO:0042793 plastid transcription
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009902 chloroplast relocation
biological_process GO:0015995 chlorophyll biosynthetic process
cellular_component GO:0005829 cytosol
cellular_component GO:0009536 plastid
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005634 nucleus
cellular_component GO:0005840 ribosome
molecular_function GO:0051087 chaperone binding
molecular_function GO:0008081 phosphoric diester hydrolase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003824 catalytic activity
RNA-Seq Expression