Spo12382 (gene)

Overview
NameSpo12382
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionEarly light-induced protein, putative
Locationchr6 : 37198526 .. 37199128 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTATGTCTATGCAAGTACAAGCCGTTCTTTCCAATTCAGTTGGTGCCTTCACTAATGGCTCCTCTAAGGCGTATCCACTAGGGTTCAACCCTCGGATGTGCAAACGTGTCAACTTCGGCGTCAAGTGTATGGCCGAGGGAGGGGCTGGTGGTCAACCCAAACTTGATTCCGGTGTACCCAAGCCAAACCCCACCGTATCTTCACCCACCTCGATCCCAACCCCAACCCCAACCCCAAGGCCACAACCAAAGAAGGTAAGCACAAACTTCAGAGACTTGTTCGCATTTAGCGGCCCTGCACCGGAAAGGATCAACGGCCGCCTAGCCATGATCGGCTTCGTGGCCGCAATAGCAGTAGAGCTATCTAACGGCACTGACCTATTTACTCAAATATCCGACGGTGGATCACAATGGTTCCTAGGAACAAGCATCCTTCTTTCAGTAGCATCATTAGTGCCATTGCTCCAAGGAAGCCGAGCAGAAGCAAAGACACAAGGGTTAATGAATGCCAACGCCGAGCTTTGGAATGGTAGAATTGCTATGTTAGGGCTTGTAGCCTTGGCTGTAACTGAGATCGTTAAAGGTGGAGCGCTTGTTTGA

mRNA sequence

ATGGCTATGTCTATGCAAGTACAAGCCGTTCTTTCCAATTCAGTTGGTGCCTTCACTAATGGCTCCTCTAAGGCGTATCCACTAGGGTTCAACCCTCGGATGTGCAAACGTGTCAACTTCGGCGTCAAGTGTATGGCCGAGGGAGGGGCTGGTGGTCAACCCAAACTTGATTCCGGTGTACCCAAGCCAAACCCCACCGTATCTTCACCCACCTCGATCCCAACCCCAACCCCAACCCCAAGGCCACAACCAAAGAAGGTAAGCACAAACTTCAGAGACTTGTTCGCATTTAGCGGCCCTGCACCGGAAAGGATCAACGGCCGCCTAGCCATGATCGGCTTCGTGGCCGCAATAGCAGTAGAGCTATCTAACGGCACTGACCTATTTACTCAAATATCCGACGGTGGATCACAATGGTTCCTAGGAACAAGCATCCTTCTTTCAGTAGCATCATTAGTGCCATTGCTCCAAGGAAGCCGAGCAGAAGCAAAGACACAAGGGTTAATGAATGCCAACGCCGAGCTTTGGAATGGTAGAATTGCTATGTTAGGGCTTGTAGCCTTGGCTGTAACTGAGATCGTTAAAGGTGGAGCGCTTGTTTGA

Coding sequence (CDS)

ATGGCTATGTCTATGCAAGTACAAGCCGTTCTTTCCAATTCAGTTGGTGCCTTCACTAATGGCTCCTCTAAGGCGTATCCACTAGGGTTCAACCCTCGGATGTGCAAACGTGTCAACTTCGGCGTCAAGTGTATGGCCGAGGGAGGGGCTGGTGGTCAACCCAAACTTGATTCCGGTGTACCCAAGCCAAACCCCACCGTATCTTCACCCACCTCGATCCCAACCCCAACCCCAACCCCAAGGCCACAACCAAAGAAGGTAAGCACAAACTTCAGAGACTTGTTCGCATTTAGCGGCCCTGCACCGGAAAGGATCAACGGCCGCCTAGCCATGATCGGCTTCGTGGCCGCAATAGCAGTAGAGCTATCTAACGGCACTGACCTATTTACTCAAATATCCGACGGTGGATCACAATGGTTCCTAGGAACAAGCATCCTTCTTTCAGTAGCATCATTAGTGCCATTGCTCCAAGGAAGCCGAGCAGAAGCAAAGACACAAGGGTTAATGAATGCCAACGCCGAGCTTTGGAATGGTAGAATTGCTATGTTAGGGCTTGTAGCCTTGGCTGTAACTGAGATCGTTAAAGGTGGAGCGCTTGTTTGA

Protein sequence

MAMSMQVQAVLSNSVGAFTNGSSKAYPLGFNPRMCKRVNFGVKCMAEGGAGGQPKLDSGVPKPNPTVSSPTSIPTPTPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGLVALAVTEIVKGGALV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo12382.1Spo12382.1mRNA


Homology
[Close]
BLAST of Spo12382.1 vs. NCBI nr
Match: gi|902150947|gb|KNA05469.1| (hypothetical protein SOVF_190050 [Spinacia oleracea])

HSP 1 Score: 356.7 bits (914), Expect = 2.700e-95
Identity = 189/200 (94.50%), Postives = 192/200 (96.00%), Query Frame = 1 

		  

Query: 1   MAMSMQVQAVLSNSVGAFTNGSSKAYPLGFNPRMCKRVNFGVKCMAEGGAGGQPKLDSGV 60
           MAMSMQVQA+LSNSVGAFTNG+SKAYPLGFNPRM KRVNFGVKCMAE  AGG+PKLDSGV
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGV 60

Query: 61  PKPNPTVSSPTSIPTPTPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAV 120
           PKPNPTVSSPT    P PTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAV
Sbjct: 61  PKPNPTVSSPT----PIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAV 120

Query: 121 ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180
           ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI
Sbjct: 121 ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180

Query: 181 AMLGLVALAVTEIVKGGALV 201
           AMLGLVALAVTEIVKGGALV
Sbjct: 181 AMLGLVALAVTEIVKGGALV 196
[Close]
BLAST of Spo12382.1 vs. NCBI nr
Match: gi|902194451|gb|KNA12559.1| (hypothetical protein SOVF_124910 [Spinacia oleracea])

HSP 1 Score: 351.3 bits (900), Expect = 1.100e-93
Identity = 186/200 (93.00%), Postives = 189/200 (94.50%), Query Frame = 1 

		  

Query: 1   MAMSMQVQAVLSNSVGAFTNGSSKAYPLGFNPRMCKRVNFGVKCMAEGGAGGQPKLDSGV 60
           MAMSMQVQA+LSNSVG F NGS KAYPLGFNPRM KRVNFGVKCMAE GAGG+PKLDS V
Sbjct: 1   MAMSMQVQALLSNSVGTFANGS-KAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSV 60

Query: 61  PKPNPTVSSPTSIPTPTPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAV 120
           PKPNPT SSPT  P PTPTPRPQPKKVSTNF DLFAFSGPAPERINGRLAMIGFVAAIAV
Sbjct: 61  PKPNPTSSSPTPTPIPTPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAV 120

Query: 121 ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180
           ELSNGTDLFTQIS+GGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI
Sbjct: 121 ELSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180

Query: 181 AMLGLVALAVTEIVKGGALV 201
           AMLGLVALAVTEIVKGGALV
Sbjct: 181 AMLGLVALAVTEIVKGGALV 199
[Close]
BLAST of Spo12382.1 vs. NCBI nr
Match: gi|902202340|gb|KNA14240.1| (hypothetical protein SOVF_109350 [Spinacia oleracea])

HSP 1 Score: 344.7 bits (883), Expect = 1.100e-91
Identity = 187/200 (93.50%), Postives = 190/200 (95.00%), Query Frame = 1 

		  

Query: 1   MAMSMQVQAVLSNSVGAFTNGSSKAYPLGFNPRMCKRVNFGVKCMAEGGAGGQPKLDSGV 60
           MAMSMQVQA++SNSVGAFTNGS KAYPLGFNPRM KRVNFGVKCMAEG AGG+PKLDSGV
Sbjct: 1   MAMSMQVQALVSNSVGAFTNGS-KAYPLGFNPRMAKRVNFGVKCMAEG-AGGEPKLDSGV 60

Query: 61  PKPNPTVSSPTSIPTPTPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAV 120
           PK NPTVSSPT    P PTPRPQPKKVSTNF DLFAFSGPAPERINGRLAMIGFVAAIAV
Sbjct: 61  PKSNPTVSSPT----PIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAV 120

Query: 121 ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180
           ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI
Sbjct: 121 ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180

Query: 181 AMLGLVALAVTEIVKGGALV 201
           AMLGLVALAVTEIVKGGALV
Sbjct: 181 AMLGLVALAVTEIVKGGALV 194
[Close]
BLAST of Spo12382.1 vs. NCBI nr
Match: gi|902164229|gb|KNA06948.1| (hypothetical protein SOVF_176380 [Spinacia oleracea])

HSP 1 Score: 342.4 bits (877), Expect = 5.200e-91
Identity = 183/200 (91.50%), Postives = 191/200 (95.50%), Query Frame = 1 

		  

Query: 1   MAMSMQVQAVLSNSVGAFTNGSSKAYPLGFNPRMCKRVNFGVKCMAEGGAGGQPKLDSGV 60
           MAMSMQVQA+LSNSVGAFTNGS+ AYPLGFNPRMCKRV+FGVKCMAE  AGG+PKL+SG+
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGSN-AYPLGFNPRMCKRVSFGVKCMAEEKAGGEPKLNSGL 60

Query: 61  PKPNPTVSSPTSIPTPTPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAV 120
           PKPNP+VSS TSI    PTPRPQPKKVSTNF DLFAFSGPAPERINGRLAMIGF+AAIAV
Sbjct: 61  PKPNPSVSSSTSI----PTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFMAAIAV 120

Query: 121 ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180
           ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI
Sbjct: 121 ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180

Query: 181 AMLGLVALAVTEIVKGGALV 201
           AMLGLVALAVTEIVKGGALV
Sbjct: 181 AMLGLVALAVTEIVKGGALV 195
[Close]
BLAST of Spo12382.1 vs. NCBI nr
Match: gi|902208596|gb|KNA15989.1| (hypothetical protein SOVF_093280 [Spinacia oleracea])

HSP 1 Score: 334.0 bits (855), Expect = 1.900e-88
Identity = 179/201 (89.05%), Postives = 184/201 (91.54%), Query Frame = 1 

		  

Query: 1   MAMSMQVQAVLSNSVGAFTNGSSKAYPLGFNPRMCKRVNFGVKCMAEGGAGGQPKLDSGV 60
           MAMSMQVQA+LSNSVGAFTNG+SKAYPLGFNPRM KRVNFGVKCMAE   GG+PKLDSG+
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKVGGEPKLDSGL 60

Query: 61  PKPNPTV-SSPTSIPTPTPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIA 120
           PKPNPTV SSPTSI    PTPRPQPKKVSTNF DLFAFSGPAPERINGRLAMIGFVAAIA
Sbjct: 61  PKPNPTVSSSPTSI----PTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIA 120

Query: 121 VELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGR 180
           VELSNGTDLFTQIS GGSQWFLGTSIL S ASLVPLLQGSRAEAKT+GLMNANAELWNGR
Sbjct: 121 VELSNGTDLFTQISGGGSQWFLGTSILFSAASLVPLLQGSRAEAKTEGLMNANAELWNGR 180

Query: 181 IAMLGLVALAVTEIVKGGALV 201
           IAMLGLVALA TE V G ALV
Sbjct: 181 IAMLGLVALAFTEFVTGSALV 197
[Close]
BLAST of Spo12382.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QDX3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_190050 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 1.900e-95
Identity = 189/200 (94.50%), Postives = 192/200 (96.00%), Query Frame = 1 

		  

Query: 1   MAMSMQVQAVLSNSVGAFTNGSSKAYPLGFNPRMCKRVNFGVKCMAEGGAGGQPKLDSGV 60
           MAMSMQVQA+LSNSVGAFTNG+SKAYPLGFNPRM KRVNFGVKCMAE  AGG+PKLDSGV
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGV 60

Query: 61  PKPNPTVSSPTSIPTPTPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAV 120
           PKPNPTVSSPT    P PTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAV
Sbjct: 61  PKPNPTVSSPT----PIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAV 120

Query: 121 ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180
           ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI
Sbjct: 121 ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180

Query: 181 AMLGLVALAVTEIVKGGALV 201
           AMLGLVALAVTEIVKGGALV
Sbjct: 181 AMLGLVALAVTEIVKGGALV 196
[Close]
BLAST of Spo12382.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QZ64_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_124910 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 7.800e-94
Identity = 186/200 (93.00%), Postives = 189/200 (94.50%), Query Frame = 1 

		  

Query: 1   MAMSMQVQAVLSNSVGAFTNGSSKAYPLGFNPRMCKRVNFGVKCMAEGGAGGQPKLDSGV 60
           MAMSMQVQA+LSNSVG F NGS KAYPLGFNPRM KRVNFGVKCMAE GAGG+PKLDS V
Sbjct: 1   MAMSMQVQALLSNSVGTFANGS-KAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSV 60

Query: 61  PKPNPTVSSPTSIPTPTPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAV 120
           PKPNPT SSPT  P PTPTPRPQPKKVSTNF DLFAFSGPAPERINGRLAMIGFVAAIAV
Sbjct: 61  PKPNPTSSSPTPTPIPTPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAV 120

Query: 121 ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180
           ELSNGTDLFTQIS+GGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI
Sbjct: 121 ELSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180

Query: 181 AMLGLVALAVTEIVKGGALV 201
           AMLGLVALAVTEIVKGGALV
Sbjct: 181 AMLGLVALAVTEIVKGGALV 199
[Close]
BLAST of Spo12382.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R401_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_109350 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 7.300e-92
Identity = 187/200 (93.50%), Postives = 190/200 (95.00%), Query Frame = 1 

		  

Query: 1   MAMSMQVQAVLSNSVGAFTNGSSKAYPLGFNPRMCKRVNFGVKCMAEGGAGGQPKLDSGV 60
           MAMSMQVQA++SNSVGAFTNGS KAYPLGFNPRM KRVNFGVKCMAEG AGG+PKLDSGV
Sbjct: 1   MAMSMQVQALVSNSVGAFTNGS-KAYPLGFNPRMAKRVNFGVKCMAEG-AGGEPKLDSGV 60

Query: 61  PKPNPTVSSPTSIPTPTPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAV 120
           PK NPTVSSPT    P PTPRPQPKKVSTNF DLFAFSGPAPERINGRLAMIGFVAAIAV
Sbjct: 61  PKSNPTVSSPT----PIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAV 120

Query: 121 ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180
           ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI
Sbjct: 121 ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180

Query: 181 AMLGLVALAVTEIVKGGALV 201
           AMLGLVALAVTEIVKGGALV
Sbjct: 181 AMLGLVALAVTEIVKGGALV 194
[Close]
BLAST of Spo12382.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJR9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_176380 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 3.600e-91
Identity = 183/200 (91.50%), Postives = 191/200 (95.50%), Query Frame = 1 

		  

Query: 1   MAMSMQVQAVLSNSVGAFTNGSSKAYPLGFNPRMCKRVNFGVKCMAEGGAGGQPKLDSGV 60
           MAMSMQVQA+LSNSVGAFTNGS+ AYPLGFNPRMCKRV+FGVKCMAE  AGG+PKL+SG+
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGSN-AYPLGFNPRMCKRVSFGVKCMAEEKAGGEPKLNSGL 60

Query: 61  PKPNPTVSSPTSIPTPTPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAV 120
           PKPNP+VSS TSI    PTPRPQPKKVSTNF DLFAFSGPAPERINGRLAMIGF+AAIAV
Sbjct: 61  PKPNPSVSSSTSI----PTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFMAAIAV 120

Query: 121 ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180
           ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI
Sbjct: 121 ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180

Query: 181 AMLGLVALAVTEIVKGGALV 201
           AMLGLVALAVTEIVKGGALV
Sbjct: 181 AMLGLVALAVTEIVKGGALV 195
[Close]
BLAST of Spo12382.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAF4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_093280 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.300e-88
Identity = 179/201 (89.05%), Postives = 184/201 (91.54%), Query Frame = 1 

		  

Query: 1   MAMSMQVQAVLSNSVGAFTNGSSKAYPLGFNPRMCKRVNFGVKCMAEGGAGGQPKLDSGV 60
           MAMSMQVQA+LSNSVGAFTNG+SKAYPLGFNPRM KRVNFGVKCMAE   GG+PKLDSG+
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKVGGEPKLDSGL 60

Query: 61  PKPNPTV-SSPTSIPTPTPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIA 120
           PKPNPTV SSPTSI    PTPRPQPKKVSTNF DLFAFSGPAPERINGRLAMIGFVAAIA
Sbjct: 61  PKPNPTVSSSPTSI----PTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIA 120

Query: 121 VELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGR 180
           VELSNGTDLFTQIS GGSQWFLGTSIL S ASLVPLLQGSRAEAKT+GLMNANAELWNGR
Sbjct: 121 VELSNGTDLFTQISGGGSQWFLGTSILFSAASLVPLLQGSRAEAKTEGLMNANAELWNGR 180

Query: 181 IAMLGLVALAVTEIVKGGALV 201
           IAMLGLVALA TE V G ALV
Sbjct: 181 IAMLGLVALAFTEFVTGSALV 197
[Close]
BLAST of Spo12382.1 vs. ExPASy Swiss-Prot
Match: ELIP1_ARATH (Early light-induced protein 1, chloroplastic OS=Arabidopsis thaliana GN=ELIP1 PE=1 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 8.700e-46
Identity = 102/197 (51.78%), Postives = 132/197 (67.01%), Query Frame = 1 

		  

Query: 4   SMQVQAVLSNSVGAFTNGSSKAYPLGFNPRMCKRVNFGVKCMAEGGAGGQPKLDSGVPKP 63
           S  +Q+V +  +      ++K +  G  P + +    GV+CMAEGG    P  +   P P
Sbjct: 5   SFNMQSVFAGGLTTRKINTNKLFSAGSFPNLKRNYPVGVRCMAEGG----PTNEDSSPAP 64

Query: 64  NPTVSSPTSIPTPTPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELS 123
           + + + P  +P     P P   KVST F DL AFSGPAPERINGRLAM+GFVAA+AVELS
Sbjct: 65  STSAAQP--LPKSPSPPPPMKPKVSTKFSDLLAFSGPAPERINGRLAMVGFVAALAVELS 124

Query: 124 NGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAML 183
            G ++  QISDGG  WFLGT+ +L++ASLVPL +G   E+K++G+M ++AELWNGR AML
Sbjct: 125 KGENVLAQISDGGVSWFLGTTAILTLASLVPLFKGISVESKSKGIMTSDAELWNGRFAML 184

Query: 184 GLVALAVTEIVKGGALV 201
           GLVALA TE VKGG LV
Sbjct: 185 GLVALAFTEFVKGGTLV 195
[Close]
BLAST of Spo12382.1 vs. ExPASy Swiss-Prot
Match: ELIP2_ARATH (Early light-induced protein 2, chloroplastic OS=Arabidopsis thaliana GN=ELIP2 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.100e-43
Identity = 108/198 (54.55%), Postives = 134/198 (67.68%), Query Frame = 1 

		  

Query: 4   SMQVQAVLSNSVGAFTNGSSKAYPLGFNPRMCKRVN-FGVKCMAEGGAGGQPKLDSGVPK 63
           S  +Q+V +   G  T  + +      N    KR+   GV+CMA+G      K D  VP 
Sbjct: 5   SFNMQSVFAAPSGVLTTRNIR----NTNQLFFKRIAPVGVRCMAQGDP---IKEDPSVPS 64

Query: 64  PNPTVSSPTSIPTPTPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVEL 123
            + T ++P  +P   P P  +PK VST F DL AFSGPAPERINGRLAM+GFVAAIA+EL
Sbjct: 65  TS-TSATPPQMPQSPPPPVSKPK-VSTKFGDLLAFSGPAPERINGRLAMVGFVAAIAMEL 124

Query: 124 SNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAM 183
           S G ++F QISDGG  WFLGT+ LL++AS+VPL +G RAEAK++G M ++AELWNGR AM
Sbjct: 125 SKGENVFAQISDGGVGWFLGTTALLTLASMVPLFKGIRAEAKSKGFMTSDAELWNGRFAM 184

Query: 184 LGLVALAVTEIVKGGALV 201
           LGLVALA TE V GG LV
Sbjct: 185 LGLVALAFTEYVTGGTLV 193
[Close]
BLAST of Spo12382.1 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.000e-41
Identity = 107/207 (51.69%), Postives = 138/207 (66.67%), Query Frame = 1 

		  

Query: 1   MAMSMQVQAVLSNSVGAFTNGSSKA-------YPLGFNPRMCKRVNFGVKCMAEGGAGGQ 60
           MA+S   Q+++SNS+   TN SS++        P  + P + + V+  V+ MAEG    Q
Sbjct: 1   MAVS-SCQSIMSNSM---TNISSRSRVNQFTNIPSVYIPTLRRNVSLKVRSMAEGEPKEQ 60

Query: 61  PKLDSGVPKPNPTVSSPTSIPTPTPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIG 120
            K+   V    PT S+PT  P  T     +P K+ST F DL AFSGPAPERINGRLAMIG
Sbjct: 61  SKV--AVDPTTPTASTPTPQPAYT-----RPPKMSTKFSDLMAFSGPAPERINGRLAMIG 120

Query: 121 FVAAIAVELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANA 180
           FVAA+ VE++ G  L  Q+S GG  WFLGTS+LLS+ASL+P  QG   E+K++ +M+++A
Sbjct: 121 FVAAMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDA 180

Query: 181 ELWNGRIAMLGLVALAVTEIVKGGALV 201
           E WNGRIAMLGLVALA TE VKG +LV
Sbjct: 181 EFWNGRIAMLGLVALAFTEFVKGTSLV 196
[Close]
BLAST of Spo12382.1 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.500e-32
Identity = 74/122 (60.66%), Postives = 85/122 (69.67%), Query Frame = 1 

		  

Query: 80  PRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGTDLFTQISDG-GSQ 139
           P P   K ST+  D  AFSGPAPERINGRLAM+GFV A+AVE   G  L +Q+  G G  
Sbjct: 49  PPPNKPKASTSIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQA 108

Query: 140 WFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGLVALAVTEIVKGGA 199
           WF  T  +LS+ASLVPLLQG  AE +   +MNANAELWNGR AMLGLVALA TEI+ G  
Sbjct: 109 WFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVALAATEIITGAP 168

Query: 200 LV 201
            +
Sbjct: 169 FI 170
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BLAST of Spo12382.1 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.600e-31
Identity = 80/156 (51.28%), Postives = 103/156 (66.03%), Query Frame = 1 

		  

Query: 53  QPKLDSGVPKPNPTVS-SPTSIPTPTPT-----PRPQPKKVSTNFRDLFAFSGPAPERIN 112
           QP +DS     + + S SP+   +P+PT     P+P  KK + +  D  AFSGPAPERIN
Sbjct: 74  QPDMDSAKETTSASTSPSPSQYTSPSPTTIPAAPKPVTKKANPSVWDALAFSGPAPERIN 133

Query: 113 GRLAMIGFVAAIAVELSNGTDLFTQIS--DGGSQWFLGTSILLSVASLVPLLQGSRAEAK 172
           GRLAM+GFVAA++VE + G  L  Q+     G  WFL T+ + SVASL+PLLQG   E+K
Sbjct: 134 GRLAMVGFVAALSVEAARGGGLLDQVGMWSSGLAWFLATAGVFSVASLLPLLQGQSVESK 193

Query: 173 TQGLMNANAELWNGRIAMLGLVALAVTEIVKGGALV 201
           + G+ +A+AELWNGR AMLGLVALA TE + G   V
Sbjct: 194 SSGIWSADAELWNGRFAMLGLVALAATEFITGAPFV 229
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BLAST of Spo12382.1 vs. TAIR (Arabidopsis)
Match: AT3G22840.1 (Chlorophyll A-B binding family protein)

HSP 1 Score: 184.9 bits (468), Expect = 4.900e-47
Identity = 102/197 (51.78%), Postives = 132/197 (67.01%), Query Frame = 1 

		  

Query: 4   SMQVQAVLSNSVGAFTNGSSKAYPLGFNPRMCKRVNFGVKCMAEGGAGGQPKLDSGVPKP 63
           S  +Q+V +  +      ++K +  G  P + +    GV+CMAEGG    P  +   P P
Sbjct: 5   SFNMQSVFAGGLTTRKINTNKLFSAGSFPNLKRNYPVGVRCMAEGG----PTNEDSSPAP 64

Query: 64  NPTVSSPTSIPTPTPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELS 123
           + + + P  +P     P P   KVST F DL AFSGPAPERINGRLAM+GFVAA+AVELS
Sbjct: 65  STSAAQP--LPKSPSPPPPMKPKVSTKFSDLLAFSGPAPERINGRLAMVGFVAALAVELS 124

Query: 124 NGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAML 183
            G ++  QISDGG  WFLGT+ +L++ASLVPL +G   E+K++G+M ++AELWNGR AML
Sbjct: 125 KGENVLAQISDGGVSWFLGTTAILTLASLVPLFKGISVESKSKGIMTSDAELWNGRFAML 184

Query: 184 GLVALAVTEIVKGGALV 201
           GLVALA TE VKGG LV
Sbjct: 185 GLVALAFTEFVKGGTLV 195
[Close]
BLAST of Spo12382.1 vs. TAIR (Arabidopsis)
Match: AT4G14690.1 (Chlorophyll A-B binding family protein)

HSP 1 Score: 176.4 bits (446), Expect = 1.700e-44
Identity = 108/198 (54.55%), Postives = 134/198 (67.68%), Query Frame = 1 

		  

Query: 4   SMQVQAVLSNSVGAFTNGSSKAYPLGFNPRMCKRVN-FGVKCMAEGGAGGQPKLDSGVPK 63
           S  +Q+V +   G  T  + +      N    KR+   GV+CMA+G      K D  VP 
Sbjct: 5   SFNMQSVFAAPSGVLTTRNIR----NTNQLFFKRIAPVGVRCMAQGDP---IKEDPSVPS 64

Query: 64  PNPTVSSPTSIPTPTPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVEL 123
            + T ++P  +P   P P  +PK VST F DL AFSGPAPERINGRLAM+GFVAAIA+EL
Sbjct: 65  TS-TSATPPQMPQSPPPPVSKPK-VSTKFGDLLAFSGPAPERINGRLAMVGFVAAIAMEL 124

Query: 124 SNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAM 183
           S G ++F QISDGG  WFLGT+ LL++AS+VPL +G RAEAK++G M ++AELWNGR AM
Sbjct: 125 SKGENVFAQISDGGVGWFLGTTALLTLASMVPLFKGIRAEAKSKGFMTSDAELWNGRFAM 184

Query: 184 LGLVALAVTEIVKGGALV 201
           LGLVALA TE V GG LV
Sbjct: 185 LGLVALAFTEYVTGGTLV 193
The following BLAST results are available for this feature:
BLAST of Spo12382.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902150947|gb|KNA05469.1|2.7e-9594.5hypothetical protein SOVF_1900... [more]
gi|902194451|gb|KNA12559.1|1.1e-9393.0hypothetical protein SOVF_1249... [more]
gi|902202340|gb|KNA14240.1|1.1e-9193.5hypothetical protein SOVF_1093... [more]
gi|902164229|gb|KNA06948.1|5.2e-9191.5hypothetical protein SOVF_1763... [more]
gi|902208596|gb|KNA15989.1|1.9e-8889.0hypothetical protein SOVF_0932... [more]
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BLAST of Spo12382.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QDX3_SPIOL1.9e-9594.5Uncharacterized protein OS=Spi... [more]
A0A0K9QZ64_SPIOL7.8e-9493.0Uncharacterized protein OS=Spi... [more]
A0A0K9R401_SPIOL7.3e-9293.5Uncharacterized protein OS=Spi... [more]
A0A0K9QJR9_SPIOL3.6e-9191.5Uncharacterized protein OS=Spi... [more]
A0A0K9RAF4_SPIOL1.3e-8889.0Uncharacterized protein OS=Spi... [more]
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BLAST of Spo12382.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ELIP1_ARATH8.7e-4651.7Early light-induced protein 1,... [more]
ELIP2_ARATH3.1e-4354.5Early light-induced protein 2,... [more]
ELI_PEA1.0e-4151.6Early light-induced protein, c... [more]
ELI9_HORVU5.5e-3260.6Low molecular mass early light... [more]
ELI5_HORVU1.6e-3151.2High molecular mass early ligh... [more]
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BLAST of Spo12382.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G22840.14.9e-4751.7Chlorophyll A-B binding family... [more]
AT4G14690.11.7e-4454.5Chlorophyll A-B binding family... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 101..152
score: 5.
IPR023329Chlorophyll a/b binding protein domainunknownSSF103511Chlorophyll a-b binding proteincoord: 75..196
score: 6.41
NoneNo IPR availableGENE3D1.20.1620.10coord: 171..198
score: 1.3E-4coord: 102..163
score: 3.
NoneNo IPR availablePANTHERPTHR14154UPF0041 BRAIN PROTEIN 44-RELATEDcoord: 66..200
score: 1.6
NoneNo IPR availablePANTHERPTHR14154:SF5EARLY LIGHT-INDUCED PROTEIN 1, CHLOROPLASTIC-RELATEDcoord: 66..200
score: 1.6

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009812 flavonoid metabolic process
biological_process GO:0009805 coumarin biosynthetic process
biological_process GO:0009809 lignin biosynthetic process
biological_process GO:0009811 stilbene biosynthetic process
biological_process GO:0032957 inositol trisphosphate metabolic process
biological_process GO:0051555 flavonol biosynthetic process
biological_process GO:0009813 flavonoid biosynthetic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005622 intracellular
cellular_component GO:0005737 cytoplasm
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0009507 chloroplast
molecular_function GO:0005506 iron ion binding
molecular_function GO:0031418 L-ascorbic acid binding
molecular_function GO:0045431 flavonol synthase activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0020037 heme binding
molecular_function GO:0016711 flavonoid 3'-monooxygenase activity
molecular_function GO:0051766 inositol trisphosphate kinase activity
molecular_function GO:0047325 inositol tetrakisphosphate 1-kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016207 4-coumarate-CoA ligase activity
molecular_function GO:0035251 UDP-glucosyltransferase activity
molecular_function GO:0045486 naringenin 3-dioxygenase activity
RNA-Seq Expression