Spo12380 (gene)

Overview
NameSpo12380
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionEarly light-induced protein, putative
Locationchr6 : 37186636 .. 37187970 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCCCATGCCCATGCCCATGCCCATGCCCATTCCAATCTACGTGACCCATTCAAGTTTACTACACGGACGTGGATACAAAATGCCCGTTAATATGAATCCTACCCACTCTACTATAAATACATTACGTTTCACATGCATACTTCATCACAACATAAACTCACACACTCTCATTCTTAAAGCATTCCTTTGCACCTTTCTCTAGTTTAAAGTTTGAAGTTTACTATCTTAATCTAAGTCATATCACAAAGTTTTAGCACTACTAATAGTAATTAATGGCAATGTCTATGCAAGTGCAAGCCCTTGTTTCCAACTCTGTTGGTGCTTTTACTAATGGCTCCAAGGCGTATCCACTAGGGTTCAACCCTCGGATGGCTAAACGCGTAAATTTTGGGGTCAAGTGTATGGCGGAGGGAGCTGGAGGTGAACCCAAGCTTGACTCCGGTGTACCCAAGTCAAACCCCACTGTATCCTCACCCACCCCAATACCAACCCCTAGACCTCAACCTAAGAAGGTATTGTTTATAGAATTTATTAAATAAACTTTTCAATCTTACAACTTCTTGATTTGTTATGTTTAAGTTAAAATGTCATCCCCTTGTGATTTGTGTTCATTTGACATGAGATATTGGATAAAATTAGACATGTTAATATGCCTAAGATGAAATATATGATAAGAAAGTGCGCTAGCTTTTTTTTACTACTTCATCTGTTTCAAAATAGTTGCTTCATTTTGACTTTCAAAATAACAGTTGTTTTATTCACTAGTAGACAAATGGTTCAACTATTTAGAAACGGAGGTAGTTTTATGATAAGGCTCGGTGCATAGGTGTTAAACTGTGGATACGAATAAGTATAATTAGGATTAAAGTTATTGATTGTGTGCTAATTTGCATTAATTCCGCAGGTAAGCACAAATTTCACAGACTTGTTCGCGTTTAGCGGCCCTGCACCGGAAAGGATCAATGGGCGCCTAGCCATGATCGGGTTCGTGGCCGCAATAGCCGTAGAACTATCTAACGGCACAGACCTATTTACTCAAATATCCGACGGTGGATCACAATGGTTCCTAGGAACAAGCATCCTTCTTTCAGTAGCATCATTAGTGCCATTGCTCCAAGGAAGCCGAGCAGAAGCAAAGACACAAGGGTTAATGAACGCCAATGCCGAGCTTTGGAATGGTAGGATTGCCATGTTAGGCCTTGTTGCCTTGGCTGTTACTGAGATTGTTAAAGGTGGAGCTCTTGTTTGAGATTTTTTTTTTGAAAAGGCCAGTGTAATGAGTTGATGAAGTTTGATATTATTATTGTAAATAGGAATTGAATTGAGGAAGCTAG

mRNA sequence

AGCCCATGCCCATGCCCATGCCCATGCCCATTCCAATCTACGTGACCCATTCAAGTTTACTACACGGACGTGGATACAAAATGCCCGTTAATATGAATCCTACCCACTCTACTATAAATACATTACGTTTCACATGCATACTTCATCACAACATAAACTCACACACTCTCATTCTTAAAGCATTCCTTTGCACCTTTCTCTAGTTTAAAGTTTGAAGTTTACTATCTTAATCTAAGTCATATCACAAAGTTTTAGCACTACTAATAGTAATTAATGGCAATGTCTATGCAAGTGCAAGCCCTTGTTTCCAACTCTGTTGGTGCTTTTACTAATGGCTCCAAGGCGTATCCACTAGGGTTCAACCCTCGGATGGCTAAACGCGTAAATTTTGGGGTCAAGTGTATGGCGGAGGGAGCTGGAGGTGAACCCAAGCTTGACTCCGGTGTACCCAAGTCAAACCCCACTGTATCCTCACCCACCCCAATACCAACCCCTAGACCTCAACCTAAGAAGGTAAGCACAAATTTCACAGACTTGTTCGCGTTTAGCGGCCCTGCACCGGAAAGGATCAATGGGCGCCTAGCCATGATCGGGTTCGTGGCCGCAATAGCCGTAGAACTATCTAACGGCACAGACCTATTTACTCAAATATCCGACGGTGGATCACAATGGTTCCTAGGAACAAGCATCCTTCTTTCAGTAGCATCATTAGTGCCATTGCTCCAAGGAAGCCGAGCAGAAGCAAAGACACAAGGGTTAATGAACGCCAATGCCGAGCTTTGGAATGGTAGGATTGCCATGTTAGGCCTTGTTGCCTTGGCTGTTACTGAGATTGTTAAAGGTGGAGCTCTTGTTTGAGATTTTTTTTTTGAAAAGGCCAGTGTAATGAGTTGATGAAGTTTGATATTATTATTGTAAATAGGAATTGAATTGAGGAAGCTAG

Coding sequence (CDS)

ATGGCAATGTCTATGCAAGTGCAAGCCCTTGTTTCCAACTCTGTTGGTGCTTTTACTAATGGCTCCAAGGCGTATCCACTAGGGTTCAACCCTCGGATGGCTAAACGCGTAAATTTTGGGGTCAAGTGTATGGCGGAGGGAGCTGGAGGTGAACCCAAGCTTGACTCCGGTGTACCCAAGTCAAACCCCACTGTATCCTCACCCACCCCAATACCAACCCCTAGACCTCAACCTAAGAAGGTAAGCACAAATTTCACAGACTTGTTCGCGTTTAGCGGCCCTGCACCGGAAAGGATCAATGGGCGCCTAGCCATGATCGGGTTCGTGGCCGCAATAGCCGTAGAACTATCTAACGGCACAGACCTATTTACTCAAATATCCGACGGTGGATCACAATGGTTCCTAGGAACAAGCATCCTTCTTTCAGTAGCATCATTAGTGCCATTGCTCCAAGGAAGCCGAGCAGAAGCAAAGACACAAGGGTTAATGAACGCCAATGCCGAGCTTTGGAATGGTAGGATTGCCATGTTAGGCCTTGTTGCCTTGGCTGTTACTGAGATTGTTAAAGGTGGAGCTCTTGTTTGA

Protein sequence

MAMSMQVQALVSNSVGAFTNGSKAYPLGFNPRMAKRVNFGVKCMAEGAGGEPKLDSGVPKSNPTVSSPTPIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGLVALAVTEIVKGGALV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo12380.1Spo12380.1mRNA


Homology
[Close]
BLAST of Spo12380.1 vs. NCBI nr
Match: gi|902202340|gb|KNA14240.1| (hypothetical protein SOVF_109350 [Spinacia oleracea])

HSP 1 Score: 372.9 bits (956), Expect = 3.500e-100
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALVSNSVGAFTNGSKAYPLGFNPRMAKRVNFGVKCMAEGAGGEPKLDSGVPK 60
           MAMSMQVQALVSNSVGAFTNGSKAYPLGFNPRMAKRVNFGVKCMAEGAGGEPKLDSGVPK
Sbjct: 1   MAMSMQVQALVSNSVGAFTNGSKAYPLGFNPRMAKRVNFGVKCMAEGAGGEPKLDSGVPK 60

Query: 61  SNPTVSSPTPIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGT 120
           SNPTVSSPTPIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGT
Sbjct: 61  SNPTVSSPTPIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGT 120

Query: 121 DLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGLV 180
           DLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGLV
Sbjct: 121 DLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGLV 180

Query: 181 ALAVTEIVKGGALV 195
           ALAVTEIVKGGALV
Sbjct: 181 ALAVTEIVKGGALV 194
[Close]
BLAST of Spo12380.1 vs. NCBI nr
Match: gi|902150947|gb|KNA05469.1| (hypothetical protein SOVF_190050 [Spinacia oleracea])

HSP 1 Score: 355.1 bits (910), Expect = 7.600e-95
Identity = 190/196 (96.94%), Postives = 191/196 (97.45%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALVSNSVGAFTNG-SKAYPLGFNPRMAKRVNFGVKCMAEG-AGGEPKLDSGV 60
           MAMSMQVQAL+SNSVGAFTNG SKAYPLGFNPRMAKRVNFGVKCMAE  AGGEPKLDSGV
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGV 60

Query: 61  PKSNPTVSSPTPIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSN 120
           PK NPTVSSPTPIPTPRPQPKKVSTNF DLFAFSGPAPERINGRLAMIGFVAAIAVELSN
Sbjct: 61  PKPNPTVSSPTPIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELSN 120

Query: 121 GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG 180
           GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG
Sbjct: 121 GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG 180

Query: 181 LVALAVTEIVKGGALV 195
           LVALAVTEIVKGGALV
Sbjct: 181 LVALAVTEIVKGGALV 196
[Close]
BLAST of Spo12380.1 vs. NCBI nr
Match: gi|902194451|gb|KNA12559.1| (hypothetical protein SOVF_124910 [Spinacia oleracea])

HSP 1 Score: 347.4 bits (890), Expect = 1.600e-92
Identity = 186/199 (93.47%), Postives = 188/199 (94.47%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALVSNSVGAFTNGSKAYPLGFNPRMAKRVNFGVKCMAE-GAGGEPKLDSGVP 60
           MAMSMQVQAL+SNSVG F NGSKAYPLGFNPRMAKRVNFGVKCMAE GAGGEPKLDS VP
Sbjct: 1   MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVP 60

Query: 61  KSNPTVSSPTPI----PTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120
           K NPT SSPTP     PTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE
Sbjct: 61  KPNPTSSSPTPTPIPTPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120

Query: 121 LSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180
           LSNGTDLFTQIS+GGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA
Sbjct: 121 LSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180

Query: 181 MLGLVALAVTEIVKGGALV 195
           MLGLVALAVTEIVKGGALV
Sbjct: 181 MLGLVALAVTEIVKGGALV 199
[Close]
BLAST of Spo12380.1 vs. NCBI nr
Match: gi|902164229|gb|KNA06948.1| (hypothetical protein SOVF_176380 [Spinacia oleracea])

HSP 1 Score: 344.7 bits (883), Expect = 1.000e-91
Identity = 182/195 (93.33%), Postives = 188/195 (96.41%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALVSNSVGAFTNGSKAYPLGFNPRMAKRVNFGVKCMAEG-AGGEPKLDSGVP 60
           MAMSMQVQAL+SNSVGAFTNGS AYPLGFNPRM KRV+FGVKCMAE  AGGEPKL+SG+P
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGSNAYPLGFNPRMCKRVSFGVKCMAEEKAGGEPKLNSGLP 60

Query: 61  KSNPTVSSPTPIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 120
           K NP+VSS T IPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGF+AAIAVELSNG
Sbjct: 61  KPNPSVSSSTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFMAAIAVELSNG 120

Query: 121 TDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGL 180
           TDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGL
Sbjct: 121 TDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGL 180

Query: 181 VALAVTEIVKGGALV 195
           VALAVTEIVKGGALV
Sbjct: 181 VALAVTEIVKGGALV 195
[Close]
BLAST of Spo12380.1 vs. NCBI nr
Match: gi|902208596|gb|KNA15989.1| (hypothetical protein SOVF_093280 [Spinacia oleracea])

HSP 1 Score: 332.0 bits (850), Expect = 6.800e-88
Identity = 180/197 (91.37%), Postives = 183/197 (92.89%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALVSNSVGAFTNG-SKAYPLGFNPRMAKRVNFGVKCMAEG-AGGEPKLDSGV 60
           MAMSMQVQAL+SNSVGAFTNG SKAYPLGFNPRMAKRVNFGVKCMAE   GGEPKLDSG+
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKVGGEPKLDSGL 60

Query: 61  PKSNPTV-SSPTPIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELS 120
           PK NPTV SSPT IPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELS
Sbjct: 61  PKPNPTVSSSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELS 120

Query: 121 NGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAML 180
           NGTDLFTQIS GGSQWFLGTSIL S ASLVPLLQGSRAEAKT+GLMNANAELWNGRIAML
Sbjct: 121 NGTDLFTQISGGGSQWFLGTSILFSAASLVPLLQGSRAEAKTEGLMNANAELWNGRIAML 180

Query: 181 GLVALAVTEIVKGGALV 195
           GLVALA TE V G ALV
Sbjct: 181 GLVALAFTEFVTGSALV 197
[Close]
BLAST of Spo12380.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R401_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_109350 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 2.400e-100
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALVSNSVGAFTNGSKAYPLGFNPRMAKRVNFGVKCMAEGAGGEPKLDSGVPK 60
           MAMSMQVQALVSNSVGAFTNGSKAYPLGFNPRMAKRVNFGVKCMAEGAGGEPKLDSGVPK
Sbjct: 1   MAMSMQVQALVSNSVGAFTNGSKAYPLGFNPRMAKRVNFGVKCMAEGAGGEPKLDSGVPK 60

Query: 61  SNPTVSSPTPIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGT 120
           SNPTVSSPTPIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGT
Sbjct: 61  SNPTVSSPTPIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGT 120

Query: 121 DLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGLV 180
           DLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGLV
Sbjct: 121 DLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGLV 180

Query: 181 ALAVTEIVKGGALV 195
           ALAVTEIVKGGALV
Sbjct: 181 ALAVTEIVKGGALV 194
[Close]
BLAST of Spo12380.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QDX3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_190050 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 5.300e-95
Identity = 190/196 (96.94%), Postives = 191/196 (97.45%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALVSNSVGAFTNG-SKAYPLGFNPRMAKRVNFGVKCMAEG-AGGEPKLDSGV 60
           MAMSMQVQAL+SNSVGAFTNG SKAYPLGFNPRMAKRVNFGVKCMAE  AGGEPKLDSGV
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGV 60

Query: 61  PKSNPTVSSPTPIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSN 120
           PK NPTVSSPTPIPTPRPQPKKVSTNF DLFAFSGPAPERINGRLAMIGFVAAIAVELSN
Sbjct: 61  PKPNPTVSSPTPIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELSN 120

Query: 121 GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG 180
           GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG
Sbjct: 121 GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG 180

Query: 181 LVALAVTEIVKGGALV 195
           LVALAVTEIVKGGALV
Sbjct: 181 LVALAVTEIVKGGALV 196
[Close]
BLAST of Spo12380.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QZ64_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_124910 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.100e-92
Identity = 186/199 (93.47%), Postives = 188/199 (94.47%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALVSNSVGAFTNGSKAYPLGFNPRMAKRVNFGVKCMAE-GAGGEPKLDSGVP 60
           MAMSMQVQAL+SNSVG F NGSKAYPLGFNPRMAKRVNFGVKCMAE GAGGEPKLDS VP
Sbjct: 1   MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVP 60

Query: 61  KSNPTVSSPTPI----PTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120
           K NPT SSPTP     PTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE
Sbjct: 61  KPNPTSSSPTPTPIPTPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120

Query: 121 LSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180
           LSNGTDLFTQIS+GGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA
Sbjct: 121 LSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180

Query: 181 MLGLVALAVTEIVKGGALV 195
           MLGLVALAVTEIVKGGALV
Sbjct: 181 MLGLVALAVTEIVKGGALV 199
[Close]
BLAST of Spo12380.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJR9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_176380 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 7.100e-92
Identity = 182/195 (93.33%), Postives = 188/195 (96.41%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALVSNSVGAFTNGSKAYPLGFNPRMAKRVNFGVKCMAEG-AGGEPKLDSGVP 60
           MAMSMQVQAL+SNSVGAFTNGS AYPLGFNPRM KRV+FGVKCMAE  AGGEPKL+SG+P
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGSNAYPLGFNPRMCKRVSFGVKCMAEEKAGGEPKLNSGLP 60

Query: 61  KSNPTVSSPTPIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 120
           K NP+VSS T IPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGF+AAIAVELSNG
Sbjct: 61  KPNPSVSSSTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFMAAIAVELSNG 120

Query: 121 TDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGL 180
           TDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGL
Sbjct: 121 TDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGL 180

Query: 181 VALAVTEIVKGGALV 195
           VALAVTEIVKGGALV
Sbjct: 181 VALAVTEIVKGGALV 195
[Close]
BLAST of Spo12380.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAF4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_093280 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 4.800e-88
Identity = 180/197 (91.37%), Postives = 183/197 (92.89%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALVSNSVGAFTNG-SKAYPLGFNPRMAKRVNFGVKCMAEG-AGGEPKLDSGV 60
           MAMSMQVQAL+SNSVGAFTNG SKAYPLGFNPRMAKRVNFGVKCMAE   GGEPKLDSG+
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKVGGEPKLDSGL 60

Query: 61  PKSNPTV-SSPTPIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELS 120
           PK NPTV SSPT IPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELS
Sbjct: 61  PKPNPTVSSSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELS 120

Query: 121 NGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAML 180
           NGTDLFTQIS GGSQWFLGTSIL S ASLVPLLQGSRAEAKT+GLMNANAELWNGRIAML
Sbjct: 121 NGTDLFTQISGGGSQWFLGTSILFSAASLVPLLQGSRAEAKTEGLMNANAELWNGRIAML 180

Query: 181 GLVALAVTEIVKGGALV 195
           GLVALA TE V G ALV
Sbjct: 181 GLVALAFTEFVTGSALV 197
[Close]
BLAST of Spo12380.1 vs. ExPASy Swiss-Prot
Match: ELIP1_ARATH (Early light-induced protein 1, chloroplastic OS=Arabidopsis thaliana GN=ELIP1 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.500e-45
Identity = 100/177 (56.50%), Postives = 126/177 (71.19%), Query Frame = 1 

		  

Query: 20  NGSKAYPLGFNPRMAKRVNFGVKCMAEGAGGEPKLDSGVPKSNPTVSSPTP-IPTPRPQP 79
           N +K +  G  P + +    GV+CMAEG    P  +   P  + + + P P  P+P P  
Sbjct: 22  NTNKLFSAGSFPNLKRNYPVGVRCMAEGG---PTNEDSSPAPSTSAAQPLPKSPSPPPPM 81

Query: 80  K-KVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGTDLFTQISDGGSQWFLGT 139
           K KVST F+DL AFSGPAPERINGRLAM+GFVAA+AVELS G ++  QISDGG  WFLGT
Sbjct: 82  KPKVSTKFSDLLAFSGPAPERINGRLAMVGFVAALAVELSKGENVLAQISDGGVSWFLGT 141

Query: 140 SILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGLVALAVTEIVKGGALV 195
           + +L++ASLVPL +G   E+K++G+M ++AELWNGR AMLGLVALA TE VKGG LV
Sbjct: 142 TAILTLASLVPLFKGISVESKSKGIMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 195
[Close]
BLAST of Spo12380.1 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.400e-43
Identity = 106/201 (52.74%), Postives = 139/201 (69.15%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALVSNSVGAFTNGSKA-----YPLGFNPRMAKRVNFGVKCMAEGAGGEPKLD 60
           MA+S   Q+++SNS+   ++ S+       P  + P + + V+  V+ MAEG   EPK  
Sbjct: 1   MAVS-SCQSIMSNSMTNISSRSRVNQFTNIPSVYIPTLRRNVSLKVRSMAEG---EPKEQ 60

Query: 61  S--GVPKSNPTVSSPTPIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIA 120
           S   V  + PT S+PTP P    +P K+ST F+DL AFSGPAPERINGRLAMIGFVAA+ 
Sbjct: 61  SKVAVDPTTPTASTPTPQPA-YTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAAMG 120

Query: 121 VELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGR 180
           VE++ G  L  Q+S GG  WFLGTS+LLS+ASL+P  QG   E+K++ +M+++AE WNGR
Sbjct: 121 VEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGR 180

Query: 181 IAMLGLVALAVTEIVKGGALV 195
           IAMLGLVALA TE VKG +LV
Sbjct: 181 IAMLGLVALAFTEFVKGTSLV 196
[Close]
BLAST of Spo12380.1 vs. ExPASy Swiss-Prot
Match: ELIP2_ARATH (Early light-induced protein 2, chloroplastic OS=Arabidopsis thaliana GN=ELIP2 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.000e-43
Identity = 101/159 (63.52%), Postives = 120/159 (75.47%), Query Frame = 1 

		  

Query: 40  GVKCMAEGAGGEP-KLDSGVPKSNPTVSSPTPIPTPRPQP---KKVSTNFTDLFAFSGPA 99
           GV+CMA+G   +P K D  VP S  T ++P  +P   P P    KVST F DL AFSGPA
Sbjct: 39  GVRCMAQG---DPIKEDPSVP-STSTSATPPQMPQSPPPPVSKPKVSTKFGDLLAFSGPA 98

Query: 100 PERINGRLAMIGFVAAIAVELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRA 159
           PERINGRLAM+GFVAAIA+ELS G ++F QISDGG  WFLGT+ LL++AS+VPL +G RA
Sbjct: 99  PERINGRLAMVGFVAAIAMELSKGENVFAQISDGGVGWFLGTTALLTLASMVPLFKGIRA 158

Query: 160 EAKTQGLMNANAELWNGRIAMLGLVALAVTEIVKGGALV 195
           EAK++G M ++AELWNGR AMLGLVALA TE V GG LV
Sbjct: 159 EAKSKGFMTSDAELWNGRFAMLGLVALAFTEYVTGGTLV 193
[Close]
BLAST of Spo12380.1 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.400e-32
Identity = 73/118 (61.86%), Postives = 84/118 (71.19%), Query Frame = 1 

		  

Query: 74  PRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGTDLFTQISDG-GSQ 133
           P P   K ST+  D  AFSGPAPERINGRLAM+GFV A+AVE   G  L +Q+  G G  
Sbjct: 44  PPPNKPKASTSIWDAMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQA 103

Query: 134 WFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGLVALAVTEIVKG 191
           WF  T  +LS+ASLVPLLQG  AE +   +MNANAELWNGR AM+GLVALA TEI+ G
Sbjct: 104 WFAYTVAMLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMIGLVALAATEIITG 161
[Close]
BLAST of Spo12380.1 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 4.100e-32
Identity = 74/122 (60.66%), Postives = 85/122 (69.67%), Query Frame = 1 

		  

Query: 74  PRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGTDLFTQISDG-GSQ 133
           P P   K ST+  D  AFSGPAPERINGRLAM+GFV A+AVE   G  L +Q+  G G  
Sbjct: 49  PPPNKPKASTSIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQA 108

Query: 134 WFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGLVALAVTEIVKGGA 193
           WF  T  +LS+ASLVPLLQG  AE +   +MNANAELWNGR AMLGLVALA TEI+ G  
Sbjct: 109 WFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVALAATEIITGAP 168

Query: 194 LV 195
            +
Sbjct: 169 FI 170
[Close]
BLAST of Spo12380.1 vs. TAIR (Arabidopsis)
Match: AT3G22840.1 (Chlorophyll A-B binding family protein)

HSP 1 Score: 183.3 bits (464), Expect = 1.400e-46
Identity = 100/177 (56.50%), Postives = 126/177 (71.19%), Query Frame = 1 

		  

Query: 20  NGSKAYPLGFNPRMAKRVNFGVKCMAEGAGGEPKLDSGVPKSNPTVSSPTP-IPTPRPQP 79
           N +K +  G  P + +    GV+CMAEG    P  +   P  + + + P P  P+P P  
Sbjct: 22  NTNKLFSAGSFPNLKRNYPVGVRCMAEGG---PTNEDSSPAPSTSAAQPLPKSPSPPPPM 81

Query: 80  K-KVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGTDLFTQISDGGSQWFLGT 139
           K KVST F+DL AFSGPAPERINGRLAM+GFVAA+AVELS G ++  QISDGG  WFLGT
Sbjct: 82  KPKVSTKFSDLLAFSGPAPERINGRLAMVGFVAALAVELSKGENVLAQISDGGVSWFLGT 141

Query: 140 SILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGLVALAVTEIVKGGALV 195
           + +L++ASLVPL +G   E+K++G+M ++AELWNGR AMLGLVALA TE VKGG LV
Sbjct: 142 TAILTLASLVPLFKGISVESKSKGIMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 195
[Close]
BLAST of Spo12380.1 vs. TAIR (Arabidopsis)
Match: AT4G14690.1 (Chlorophyll A-B binding family protein)

HSP 1 Score: 176.4 bits (446), Expect = 1.700e-44
Identity = 101/159 (63.52%), Postives = 120/159 (75.47%), Query Frame = 1 

		  

Query: 40  GVKCMAEGAGGEP-KLDSGVPKSNPTVSSPTPIPTPRPQP---KKVSTNFTDLFAFSGPA 99
           GV+CMA+G   +P K D  VP S  T ++P  +P   P P    KVST F DL AFSGPA
Sbjct: 39  GVRCMAQG---DPIKEDPSVP-STSTSATPPQMPQSPPPPVSKPKVSTKFGDLLAFSGPA 98

Query: 100 PERINGRLAMIGFVAAIAVELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRA 159
           PERINGRLAM+GFVAAIA+ELS G ++F QISDGG  WFLGT+ LL++AS+VPL +G RA
Sbjct: 99  PERINGRLAMVGFVAAIAMELSKGENVFAQISDGGVGWFLGTTALLTLASMVPLFKGIRA 158

Query: 160 EAKTQGLMNANAELWNGRIAMLGLVALAVTEIVKGGALV 195
           EAK++G M ++AELWNGR AMLGLVALA TE V GG LV
Sbjct: 159 EAKSKGFMTSDAELWNGRFAMLGLVALAFTEYVTGGTLV 193
The following BLAST results are available for this feature:
BLAST of Spo12380.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902202340|gb|KNA14240.1|3.5e-100100.hypothetical protein SOVF_1093... [more]
gi|902150947|gb|KNA05469.1|7.6e-9596.9hypothetical protein SOVF_1900... [more]
gi|902194451|gb|KNA12559.1|1.6e-9293.4hypothetical protein SOVF_1249... [more]
gi|902164229|gb|KNA06948.1|1.0e-9193.3hypothetical protein SOVF_1763... [more]
gi|902208596|gb|KNA15989.1|6.8e-8891.3hypothetical protein SOVF_0932... [more]
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BLAST of Spo12380.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R401_SPIOL2.4e-100100.Uncharacterized protein OS=Spi... [more]
A0A0K9QDX3_SPIOL5.3e-9596.9Uncharacterized protein OS=Spi... [more]
A0A0K9QZ64_SPIOL1.1e-9293.4Uncharacterized protein OS=Spi... [more]
A0A0K9QJR9_SPIOL7.1e-9293.3Uncharacterized protein OS=Spi... [more]
A0A0K9RAF4_SPIOL4.8e-8891.3Uncharacterized protein OS=Spi... [more]
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BLAST of Spo12380.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ELIP1_ARATH2.5e-4556.5Early light-induced protein 1,... [more]
ELI_PEA1.4e-4352.7Early light-induced protein, c... [more]
ELIP2_ARATH3.0e-4363.5Early light-induced protein 2,... [more]
ELI6_HORVU2.4e-3261.8Low molecular mass early light... [more]
ELI9_HORVU4.1e-3260.6Low molecular mass early light... [more]
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BLAST of Spo12380.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G22840.11.4e-4656.5Chlorophyll A-B binding family... [more]
AT4G14690.11.7e-4463.5Chlorophyll A-B binding family... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 95..147
score: 3.
IPR023329Chlorophyll a/b binding protein domainunknownSSF103511Chlorophyll a-b binding proteincoord: 76..190
score: 9.02
NoneNo IPR availableGENE3D1.20.1620.10coord: 96..157
score: 3.0E-4coord: 165..192
score: 1.
NoneNo IPR availablePANTHERPTHR14154UPF0041 BRAIN PROTEIN 44-RELATEDcoord: 61..194
score: 1.8
NoneNo IPR availablePANTHERPTHR14154:SF5EARLY LIGHT-INDUCED PROTEIN 1, CHLOROPLASTIC-RELATEDcoord: 61..194
score: 1.8

RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo123890.91Barchart | Table
Spo123820.86Barchart | Table
Spo123860.65Barchart | Table