Spo12352 (gene) | SpinachBase

Overview


Name	Spo12352
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Myb family transcription factor-related protein
Location	chr5 : 26040849 .. 26044170 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAGAATGGAAATATTTTTTATTAAAGGAAGTAAAAATGTAAAGAAAGAAAAGGCAAATAAGGACCATTTCTCCTTTCTCTCCTCACCCTTAAAAAACCGCATCCTATTCTCTTCCTTATTTGCATATCGCATTTGTTCGTATTCTCGAGAGAAAGAGGAGAGAGAGAGAAAAGAAAAAGAAAAAAAAAAAGAGAAAGAAAGAAGGAAAGAATGTTCCATCACCCTAAGAAGCCTTCTTCTATGACTTCAAATGAAAGGACTTCTTCCATGTGTGTTCAAAATGACTCTGGCCTCGTTCTCACTACCGACCCTAAGCCTCGTCTTAGGTGGACTGTCGAGCTCCATGAACGCTTTGTTGATGCTGTTACTCAGCTTGGAGGCCCTGATAGTACTTACTCTTTACTCTCTAATTAAGCTACTTTTTAGTTCATTACAATTATTACTTGTCAATTTTAAATATCGATATAAGGACGATGCAATATTATTTCTGAAGAATTGAACAAATTTTCTAATAGGGTTTTATTTTCCTTTGTTATTGTTGAATGTTTATGCAGAAGCTACACCAAAGACCATCATGAGAGTTATGGGTGTTAAAGGTCTCACTTTGTACCACCTCAAGAGCCATCTTCAGGTTAGCTTTATTTACTCGTTAATTACTCTCTTCATGCAATTTCTACACCATATTATTGAACATAATAACAATTTTTATCAACTAACTAATCAAAATTCTTACAAAATAACTACCTTTAGTTTGGTAAAGAATTCCCAATATCTTTTTAATTTTTAGGGATTGTAATAAGGTGTAATTTTTGTATATTGAGTGTGGTGCAACTTTTGCAATAAAAGTTTCAAGTGTAAGTATGTAATACTAGATTAAATTATAATGATTATAATTGGCTTGAAATTGAAAGTTCTTCATATAGTATATGTTTTAATTTCATATCTTAATTAATCTTGTAGTTATGTTGTTTTTATTACAGAAATTTCGGCTAGGAAAGCAGCCTCATAAGGATTTTAGTGACCATCATTCGGTTAAGGATGGTAAGAGAGGTGACTGATTAATCATCTATATATATCGGTCTAGGGTTTCTCATTTTCCAAACAAATTTACATGTTCAATTTTATAGTTATAAATTTGTAATGAGTAAGAAAAAAGACCTAACTCCATTCGTGTGTTTTTCGTTGTTTCCTACTCGCGGCTGCAGCATCTTCGTTGGAGCTTCAGAGGAACACTGCATCTTCCTCGGGACTAATGGGTCGCAGTATGAATCACGAGTACGTGTTTTAAACGTAATATATATATATATATATATCATGTTTATTTCATTCTCCGCCGCAGCAAGTATATAGGATCGGAGTATATTGTATTTTGACATAGGAAACTAATTAACTTTTGTAAGGCAACTTCTAACTGAAGTAACCTTATTGCAATTGTTTAAGAGCCACTCCCTCCTAGAATATCTTTTTATCTGGCATCTTCTTCTTTTAATTTTCCACTTTTATCTTTCTCTTTCTTTTAATTTCTATTTTTAATTTTTGATTTTCTATGTTAATTGTATTCTTCTTTTAGTTAACATTCTTTTGTTCCAATTTCACAGCAGCAATGTGCATATTAGTGATGCACTCAGGATGCAAATGGAGGTTCAGAGGAGACTCCAAGAACAATTAGAGGTGAGACCATAACACACTAATAATTCCAGCAAAAATTAAAAGACCATATCAAAAGGAGTTTAGTACTTGCACTGGTTTTCTATGTTTAGTGACTGAAATTTCCGTGACTTATGGGCCATTTCCATTCACTGAACCATAGGCGGTTCTTGGGTGTAGATGAAGTATTTTCGGATATCAGATATGTGCTTGTAAATACATATCATAGCTAAAGACAAAAAAGAAAAAATGACAAAAAAGAAATTAAATGGTAATTTTTTAAACAAAAATGGTACTTTTTTTGACATAATGGTACTGTTTTTTACAAAATTGCATTTTTTTTTTTGCAAAATGGTACTTCCTATTTTGTCTTTTAGCTATTTGTATTTTAGCTGATATGTGTGTTGCCACATATATCTGATATGCGAAAAAACAACCTCCTTGGGTGTACGGGTGAGCGACAACACAGAGCCCCAATTTCAGATATAATATAATTAGTTTTCCAAGTGTTAACAAAAAAAAATTGAAGTAATGGCTAAGATGTTGTTATGTAATAATATATTTTTTTTTATGACAATGTGATAAAGTTATGAAGTGGTAATGGCAGGTCCAAAGACATTTACAACTAAGGATTGAAGCGCAAGGAAAGTACATGCAGAACATACTAGAGAAAGCATGTCAAACACTAGCAGGAGAAACCAACATGGCAGCTTCAGGAAGCTATAATAACAAAGGCAACAACAACCTTCTAGGCAATAACAGCCCAACAATGGTGGACCATTTAGGAGGATCAATGAAAGAATTCGGGCCGATGAACTTCCCTTCCCTCCAAGACCTTAACATCTACGGTGGAGAACAACAACTAGATCTACACCCAAGTATGGACCGATCTTCATCGTTTGAAAACTTCATGCAAGTACCAAATGATAGCCTTTGTTTAGGCCAAAAGAAGAGACCAAACATTTATAATAACGGGAATAATAATGGTAAGAGTCCTTTAATGTGGTCTGATAACGATCATCTTCGTCTTCAAGAACTCGGACCTCCAACATCAGCAAGTTGCTTAGGGCATCCACAAGATCCTTTTAAGGCAACAGATATTCAAATTGCACCACCATCTTCGTCTTTGGATCATCATCAAATCGATTCAATCTCGGAGATTTATGAGTCAAAGCCACTCCTAACAACTGATATTGACAAGAAATTTGATTCGTCGCCTAAGCTAGAGAGGTTGTCACCACTCTCACCAACAACACAAGGTATCTCTCTTGGGAGAAATTCTCCCTACGGTTGAAACTTGATAATTTTGTTATGTAGGTGTAACCATATTTCCTTTTCCTTTTCTTTTAGATCAAACTTTTTTTTTCTATGCTCCATTTTTTTGCATGGTCCATCGTTAGTCATTTAAGTAGGTTTAATGATCTGAATGGTGTAACTTTTAATACTTAATTATTGTTAATAATGTTATGCTCGTTCTTAGATCTTTCGAAATTTTGTTCCATGCATGGGATTTTATTATTTGTTAAAAGTAATATGCTAGATCGGAATTATTCTAACGGTGTTGGAACAAATTTTAGCGATTACTTATGTGGACTGTTATAAGTTATAACCAATGTGTAGGAAATGTATCGTGTTTTTTAAAATATTTATTGATGAACAATCTTCAAAATCTG

mRNA sequence

AAGAGAATGGAAATATTTTTTATTAAAGGAAGTAAAAATGTAAAGAAAGAAAAGGCAAATAAGGACCATTTCTCCTTTCTCTCCTCACCCTTAAAAAACCGCATCCTATTCTCTTCCTTATTTGCATATCGCATTTGTTCGTATTCTCGAGAGAAAGAGGAGAGAGAGAGAAAAGAAAAAGAAAAAAAAAAAGAGAAAGAAAGAAGGAAAGAATGTTCCATCACCCTAAGAAGCCTTCTTCTATGACTTCAAATGAAAGGACTTCTTCCATGTGTGTTCAAAATGACTCTGGCCTCGTTCTCACTACCGACCCTAAGCCTCGTCTTAGGTGGACTGTCGAGCTCCATGAACGCTTTGTTGATGCTGTTACTCAGCTTGGAGGCCCTGATAAAGCTACACCAAAGACCATCATGAGAGTTATGGGTGTTAAAGGTCTCACTTTGTACCACCTCAAGAGCCATCTTCAGAAATTTCGGCTAGGAAAGCAGCCTCATAAGGATTTTAGTGACCATCATTCGGTTAAGGATGCATCTTCGTTGGAGCTTCAGAGGAACACTGCATCTTCCTCGGGACTAATGGGTCGCAGTATGAATCACGACAGCAATGTGCATATTAGTGATGCACTCAGGATGCAAATGGAGGTTCAGAGGAGACTCCAAGAACAATTAGAGGTCCAAAGACATTTACAACTAAGGATTGAAGCGCAAGGAAAGTACATGCAGAACATACTAGAGAAAGCATGTCAAACACTAGCAGGAGAAACCAACATGGCAGCTTCAGGAAGCTATAATAACAAAGGCAACAACAACCTTCTAGGCAATAACAGCCCAACAATGGTGGACCATTTAGGAGGATCAATGAAAGAATTCGGGCCGATGAACTTCCCTTCCCTCCAAGACCTTAACATCTACGGTGGAGAACAACAACTAGATCTACACCCAAGTATGGACCGATCTTCATCGTTTGAAAACTTCATGCAAGTACCAAATGATAGCCTTTGTTTAGGCCAAAAGAAGAGACCAAACATTTATAATAACGGGAATAATAATGGTAAGAGTCCTTTAATGTGGTCTGATAACGATCATCTTCGTCTTCAAGAACTCGGACCTCCAACATCAGCAAGTTGCTTAGGGCATCCACAAGATCCTTTTAAGGCAACAGATATTCAAATTGCACCACCATCTTCGTCTTTGGATCATCATCAAATCGATTCAATCTCGGAGATTTATGAGTCAAAGCCACTCCTAACAACTGATATTGACAAGAAATTTGATTCGTCGCCTAAGCTAGAGAGGTTGTCACCACTCTCACCAACAACACAAGGTATCTCTCTTGGGAGAAATTCTCCCTACGGTTGAAACTTGATAATTTTGTTATGTAGGTGTAACCATATTTCCTTTTCCTTTTCTTTTAGATCAAACTTTTTTTTTCTATGCTCCATTTTTTTGCATGGTCCATCGTTAGTCATTTAAGTAGGTTTAATGATCTGAATGGTGTAACTTTTAATACTTAATTATTGTTAATAATGTTATGCTCGTTCTTAGATCTTTCGAAATTTTGTTCCATGCATGGGATTTTATTATTTGTTAAAAGTAATATGCTAGATCGGAATTATTCTAACGGTGTTGGAACAAATTTTAGCGATTACTTATGTGGACTGTTATAAGTTATAACCAATGTGTAGGAAATGTATCGTGTTTTTTAAAATATTTATTGATGAACAATCTTCAAAATCTG

Coding sequence (CDS)

ATGTTCCATCACCCTAAGAAGCCTTCTTCTATGACTTCAAATGAAAGGACTTCTTCCATGTGTGTTCAAAATGACTCTGGCCTCGTTCTCACTACCGACCCTAAGCCTCGTCTTAGGTGGACTGTCGAGCTCCATGAACGCTTTGTTGATGCTGTTACTCAGCTTGGAGGCCCTGATAAAGCTACACCAAAGACCATCATGAGAGTTATGGGTGTTAAAGGTCTCACTTTGTACCACCTCAAGAGCCATCTTCAGAAATTTCGGCTAGGAAAGCAGCCTCATAAGGATTTTAGTGACCATCATTCGGTTAAGGATGCATCTTCGTTGGAGCTTCAGAGGAACACTGCATCTTCCTCGGGACTAATGGGTCGCAGTATGAATCACGACAGCAATGTGCATATTAGTGATGCACTCAGGATGCAAATGGAGGTTCAGAGGAGACTCCAAGAACAATTAGAGGTCCAAAGACATTTACAACTAAGGATTGAAGCGCAAGGAAAGTACATGCAGAACATACTAGAGAAAGCATGTCAAACACTAGCAGGAGAAACCAACATGGCAGCTTCAGGAAGCTATAATAACAAAGGCAACAACAACCTTCTAGGCAATAACAGCCCAACAATGGTGGACCATTTAGGAGGATCAATGAAAGAATTCGGGCCGATGAACTTCCCTTCCCTCCAAGACCTTAACATCTACGGTGGAGAACAACAACTAGATCTACACCCAAGTATGGACCGATCTTCATCGTTTGAAAACTTCATGCAAGTACCAAATGATAGCCTTTGTTTAGGCCAAAAGAAGAGACCAAACATTTATAATAACGGGAATAATAATGGTAAGAGTCCTTTAATGTGGTCTGATAACGATCATCTTCGTCTTCAAGAACTCGGACCTCCAACATCAGCAAGTTGCTTAGGGCATCCACAAGATCCTTTTAAGGCAACAGATATTCAAATTGCACCACCATCTTCGTCTTTGGATCATCATCAAATCGATTCAATCTCGGAGATTTATGAGTCAAAGCCACTCCTAACAACTGATATTGACAAGAAATTTGATTCGTCGCCTAAGCTAGAGAGGTTGTCACCACTCTCACCAACAACACAAGGTATCTCTCTTGGGAGAAATTCTCCCTACGGTTGA

Protein sequence

MFHHPKKPSSMTSNERTSSMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFSDHHSVKDASSLELQRNTASSSGLMGRSMNHDSNVHISDALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTLAGETNMAASGSYNNKGNNNLLGNNSPTMVDHLGGSMKEFGPMNFPSLQDLNIYGGEQQLDLHPSMDRSSSFENFMQVPNDSLCLGQKKRPNIYNNGNNNGKSPLMWSDNDHLRLQELGPPTSASCLGHPQDPFKATDIQIAPPSSSLDHHQIDSISEIYESKPLLTTDIDKKFDSSPKLERLSPLSPTTQGISLGRNSPYG

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo12352.1	Spo12352.1	mRNA

Homology

[Close]

BLAST of Spo12352.1 vs. NCBI nr
Match: gi|902228841|gb|KNA21280.1| (hypothetical protein SOVF_044360 [Spinacia oleracea])

HSP 1 Score: 763.1 bits (1969), Expect = 2.400e-217
Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 1


		  
Query: 1   MFHHPKKPSSMTSNERTSSMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDK 60
           MFHHPKKPSSMTSNERTSSMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDK
Sbjct: 1   MFHHPKKPSSMTSNERTSSMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDK 60

Query: 61  ATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFSDHHSVKDASSLELQRNTASSSG 120
           ATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFSDHHSVKDASSLELQRNTASSSG
Sbjct: 61  ATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFSDHHSVKDASSLELQRNTASSSG 120

Query: 121 LMGRSMNHDSNVHISDALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTL 180
           LMGRSMNHDSNVHISDALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTL
Sbjct: 121 LMGRSMNHDSNVHISDALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTL 180

Query: 181 AGETNMAASGSYNNKGNNNLLGNNSPTMVDHLGGSMKEFGPMNFPSLQDLNIYGGEQQLD 240
           AGETNMAASGSYNNKGNNNLLGNNSPTMVDHLGGSMKEFGPMNFPSLQDLNIYGGEQQLD
Sbjct: 181 AGETNMAASGSYNNKGNNNLLGNNSPTMVDHLGGSMKEFGPMNFPSLQDLNIYGGEQQLD 240

Query: 241 LHPSMDRSSSFENFMQVPNDSLCLGQKKRPNIYNNGNNNGKSPLMWSDNDHLRLQELGPP 300
           LHPSMDRSSSFENFMQVPNDSLCLGQKKRPNIYNNGNNNGKSPLMWSDNDHLRLQELGPP
Sbjct: 241 LHPSMDRSSSFENFMQVPNDSLCLGQKKRPNIYNNGNNNGKSPLMWSDNDHLRLQELGPP 300

Query: 301 TSASCLGHPQDPFKATDIQIAPPSSSLDHHQIDSISEIYESKPLLTTDIDKKFDSSPKLE 360
           TSASCLGHPQDPFKATDIQIAPPSSSLDHHQIDSISEIYESKPLLTTDIDKKFDSSPKLE
Sbjct: 301 TSASCLGHPQDPFKATDIQIAPPSSSLDHHQIDSISEIYESKPLLTTDIDKKFDSSPKLE 360

Query: 361 RLSPLSPTTQGISLGRNSPYG 382
           RLSPLSPTTQGISLGRNSPYG
Sbjct: 361 RLSPLSPTTQGISLGRNSPYG 381

[Close]

BLAST of Spo12352.1 vs. NCBI nr
Match: gi|731344728|ref|XP_010683575.1| (PREDICTED: myb family transcription factor APL isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 570.1 bits (1468), Expect = 2.900e-159
Identity = 319/414 (77.05%), Postives = 341/414 (82.37%), Query Frame = 1


		  
Query: 1   MFHHPKKPSSMTSNERTSSMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDK 60
           MFHHPKKPSSM SNERT+SMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDK
Sbjct: 1   MFHHPKKPSSMNSNERTTSMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDK 60

Query: 61  ATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFSDHHSVKDASSLELQRNTASSSG 120
           ATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHK+F+D HSVKDAS++ELQRN+ASSSG
Sbjct: 61  ATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFND-HSVKDASAMELQRNSASSSG 120

Query: 121 LMGRSMNHDSNVHISDALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTL 180
           LMGRSMN D+NVHISDALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTL
Sbjct: 121 LMGRSMN-DNNVHISDALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTL 180

Query: 181 AGETNMAASGSYN--NKGNNNLLGNNSPTMVDHLGGSMKEFGPMNFPSLQDLNIYGGEQQ 240
           AGETNM AS SYN  N  NNNL  NNS    DHL GSMKEFG MNFPSLQDLNIYGGEQ 
Sbjct: 181 AGETNMTASASYNKGNNNNNNLSSNNSSMAADHLSGSMKEFGTMNFPSLQDLNIYGGEQP 240

Query: 241 LDLHPSMDRSSSFENFMQV-PNDSLCLG-QKKRPNIY--------NNGNNNGKSPLMWSD 300
           LDLH S+DRSSS ENFMQ+ P+D+L LG  KKR N +        NN NNNGKSP++WSD
Sbjct: 241 LDLHQSIDRSSSLENFMQLAPSDNLYLGNNKKRSNPFNNNVNNNNNNNNNNGKSPIIWSD 300

Query: 301 NDHLRLQELGPPTSASCLG-------HPQDPFKATDIQIAPP----------SSSLDHHQ 360
            DHLRLQELGPPT  +CLG       H +  FKA DIQIAPP          SS+ D HQ
Sbjct: 301 -DHLRLQELGPPT-PTCLGPQDHHHHHQEHLFKAGDIQIAPPSLDHHHHHHRSSNNDDHQ 360

Query: 361 IDSISEIYESKPLLTTDI----DKKFDSSPKLERLSPLSPTTQGISLGRNSPYG 382
           IDSISEIY+SKP+LT+DI    DKKF+SS KLER   LSP  QG +LGRNS YG
Sbjct: 361 IDSISEIYDSKPILTSDIVVGVDKKFESSTKLER---LSPARQGTTLGRNSTYG 407

[Close]

BLAST of Spo12352.1 vs. NCBI nr
Match: gi|731344726|ref|XP_010683574.1| (PREDICTED: myb family transcription factor APL isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 564.7 bits (1454), Expect = 1.200e-157
Identity = 319/417 (76.50%), Postives = 341/417 (81.77%), Query Frame = 1


		  
Query: 1   MFHHPKKPSSMTSNERTSSMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDK 60
           MFHHPKKPSSM SNERT+SMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDK
Sbjct: 1   MFHHPKKPSSMNSNERTTSMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDK 60

Query: 61  ATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFSDHHSVKD---ASSLELQRNTAS 120
           ATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHK+F+D HSVKD   AS++ELQRN+AS
Sbjct: 61  ATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFND-HSVKDGKRASAMELQRNSAS 120

Query: 121 SSGLMGRSMNHDSNVHISDALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKAC 180
           SSGLMGRSMN D+NVHISDALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKAC
Sbjct: 121 SSGLMGRSMN-DNNVHISDALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKAC 180

Query: 181 QTLAGETNMAASGSYN--NKGNNNLLGNNSPTMVDHLGGSMKEFGPMNFPSLQDLNIYGG 240
           QTLAGETNM AS SYN  N  NNNL  NNS    DHL GSMKEFG MNFPSLQDLNIYGG
Sbjct: 181 QTLAGETNMTASASYNKGNNNNNNLSSNNSSMAADHLSGSMKEFGTMNFPSLQDLNIYGG 240

Query: 241 EQQLDLHPSMDRSSSFENFMQV-PNDSLCLG-QKKRPNIY--------NNGNNNGKSPLM 300
           EQ LDLH S+DRSSS ENFMQ+ P+D+L LG  KKR N +        NN NNNGKSP++
Sbjct: 241 EQPLDLHQSIDRSSSLENFMQLAPSDNLYLGNNKKRSNPFNNNVNNNNNNNNNNGKSPII 300

Query: 301 WSDNDHLRLQELGPPTSASCLG-------HPQDPFKATDIQIAPP----------SSSLD 360
           WSD DHLRLQELGPPT  +CLG       H +  FKA DIQIAPP          SS+ D
Sbjct: 301 WSD-DHLRLQELGPPT-PTCLGPQDHHHHHQEHLFKAGDIQIAPPSLDHHHHHHRSSNND 360

Query: 361 HHQIDSISEIYESKPLLTTDI----DKKFDSSPKLERLSPLSPTTQGISLGRNSPYG 382
            HQIDSISEIY+SKP+LT+DI    DKKF+SS KLER   LSP  QG +LGRNS YG
Sbjct: 361 DHQIDSISEIYDSKPILTSDIVVGVDKKFESSTKLER---LSPARQGTTLGRNSTYG 410

[Close]

BLAST of Spo12352.1 vs. NCBI nr
Match: gi|747095753|ref|XP_011095765.1| (PREDICTED: myb family transcription factor APL isoform X2 [Sesamum indicum])

HSP 1 Score: 429.5 bits (1103), Expect = 6.200e-117
Identity = 265/400 (66.25%), Postives = 297/400 (74.25%), Query Frame = 1


		  
Query: 4   HPK--KPSSMTSNERTSSMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKA 63
           HPK  KPSSM S+     MCVQ DSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKA
Sbjct: 3   HPKQQKPSSMNSHHERP-MCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKA 62

Query: 64  TPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFSDHHSVKDASSLELQRNTASSSGL 123
           TPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDF+D HS+KDASSLELQRN ASSSG+
Sbjct: 63  TPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFND-HSMKDASSLELQRNNASSSGI 122

Query: 124 MGRSMNHDSNVHISDALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTLA 183
           +GRSMN  SNVHI+DA+RMQMEV RRL EQLEVQRHLQLRIEAQGKYMQ ILEKACQTLA
Sbjct: 123 LGRSMNDGSNVHITDAIRMQMEVNRRLHEQLEVQRHLQLRIEAQGKYMQTILEKACQTLA 182

Query: 184 GETNMAASGSYNNKGNNNLLGNNSPTMVDHLGGSMKEFGP--MNFPSLQDLNIYGGEQQL 243
           GE NM ASGSYN     ++ G             MK+FGP  MNFPSLQDLNIYG    L
Sbjct: 183 GE-NM-ASGSYNKAMGPDISG-------------MKDFGPAAMNFPSLQDLNIYGATDHL 242

Query: 244 DL-HPSMDRSSSFENFMQVPNDSLCLGQKKRPNIYNNGNNNGKSPLMWSDNDHLRLQELG 303
           +L H +MDR SS + FM   NDS+ L  KKRPN Y+  NN+GKSPL+W+D+  LRLQELG
Sbjct: 243 ELHHQNMDR-SSIDPFMHTNNDSMML-SKKRPNPYS--NNSGKSPLIWADD--LRLQELG 302

Query: 304 PPTSASCL-GHPQDPFKATDIQIAPPSSSLDH-HQIDSISEIYESKPLLTTDI-----DK 363
            P +A CL  H Q       IQIAP   S+D    IDS+S+IYE+KP+L+ D      DK
Sbjct: 303 TPAAAPCLDDHHQ-------IQIAP--LSIDRGSDIDSVSDIYETKPILSGDHHDSMGDK 362

Query: 364 KFDSSPKLERLSP----------LSPTTQGISLGRNSPYG 382
           KFD+S KLER SP           + +  GI+ GR+SP+G
Sbjct: 363 KFDASAKLERPSPRRMADRITNHAAISAGGITQGRSSPFG 370

[Close]

BLAST of Spo12352.1 vs. NCBI nr
Match: gi|703084456|ref|XP_010092480.1| (Myb family transcription factor APL [Morus notabilis])

HSP 1 Score: 424.1 bits (1089), Expect = 2.600e-115
Identity = 261/395 (66.08%), Postives = 302/395 (76.46%), Query Frame = 1


		  
Query: 1   MFHHPKKPSSMTSNERTSSMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDK 60
           MF H KKPS+M S++R   MCVQ DSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDK
Sbjct: 1   MFQH-KKPSTMNSHDRP--MCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDK 60

Query: 61  ATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFSDHHSVKDASSLELQRNTASSSG 120
           ATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHK+F+D HS+KDAS+LELQRNTASSSG
Sbjct: 61  ATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFND-HSIKDASALELQRNTASSSG 120

Query: 121 LMGRSMNHDSNVHISDALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTL 180
           ++ RSMN   N HI DA+RMQMEVQRRL EQLEVQ+HLQLRIEAQGKYMQ+ILEKACQTL
Sbjct: 121 MISRSMN--DNSHIVDAIRMQMEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKACQTL 180

Query: 181 AGETNMAASGSYNNKGNNNLLGNNSPTMVDHLGGSMKEF-GPMNFPSLQDLNIYGGEQQL 240
           AGE +M AS + N KG+    G N   M     G++K+F  P+ FPS QDLNIYGG+ QL
Sbjct: 181 AGENSM-ASAAGNYKGSIVNHGVNPHDM-----GTLKDFTAPLGFPSFQDLNIYGGD-QL 240

Query: 241 DLHPSMDRSSSFENFMQVPNDSLCLGQKKRPNIYNNGNNNGKSPLMWSDNDHLRLQELGP 300
           DL  SMDR S    F+   ND+LCLG KKRP+ YN   + GKSPLMWSD+  LRLQ+LG 
Sbjct: 241 DLQQSMDRPSIDHGFLP-NNDNLCLG-KKRPSPYN--GSTGKSPLMWSDD--LRLQDLG- 300

Query: 301 PTSASCLGHP-QDPFKATDIQIAPPSSSLDHHQIDSISEIYESKPLLTTDI--DKKFD-S 360
            T+ASCLG P  DPFK   IQ+APPS      +IDS+S+IYE+KP+++ +   +KK+D +
Sbjct: 301 -TAASCLGPPDHDPFKGDQIQMAPPSIERG-TEIDSLSDIYETKPVISGEHMGEKKYDVA 360

Query: 361 SPKLERLSP---------LSPTTQGISLGRNSPYG 382
             KLER SP         +SP  Q    GRNSP+G
Sbjct: 361 GAKLERPSPRRVPLAGERMSPMIQ----GRNSPFG 369

[Close]

BLAST of Spo12352.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RP23_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_044360 PE=4 SV=1)

HSP 1 Score: 763.1 bits (1969), Expect = 1.600e-217
Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 1


		  
Query: 1   MFHHPKKPSSMTSNERTSSMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDK 60
           MFHHPKKPSSMTSNERTSSMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDK
Sbjct: 1   MFHHPKKPSSMTSNERTSSMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDK 60

Query: 61  ATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFSDHHSVKDASSLELQRNTASSSG 120
           ATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFSDHHSVKDASSLELQRNTASSSG
Sbjct: 61  ATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFSDHHSVKDASSLELQRNTASSSG 120

Query: 121 LMGRSMNHDSNVHISDALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTL 180
           LMGRSMNHDSNVHISDALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTL
Sbjct: 121 LMGRSMNHDSNVHISDALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTL 180

Query: 181 AGETNMAASGSYNNKGNNNLLGNNSPTMVDHLGGSMKEFGPMNFPSLQDLNIYGGEQQLD 240
           AGETNMAASGSYNNKGNNNLLGNNSPTMVDHLGGSMKEFGPMNFPSLQDLNIYGGEQQLD
Sbjct: 181 AGETNMAASGSYNNKGNNNLLGNNSPTMVDHLGGSMKEFGPMNFPSLQDLNIYGGEQQLD 240

Query: 241 LHPSMDRSSSFENFMQVPNDSLCLGQKKRPNIYNNGNNNGKSPLMWSDNDHLRLQELGPP 300
           LHPSMDRSSSFENFMQVPNDSLCLGQKKRPNIYNNGNNNGKSPLMWSDNDHLRLQELGPP
Sbjct: 241 LHPSMDRSSSFENFMQVPNDSLCLGQKKRPNIYNNGNNNGKSPLMWSDNDHLRLQELGPP 300

Query: 301 TSASCLGHPQDPFKATDIQIAPPSSSLDHHQIDSISEIYESKPLLTTDIDKKFDSSPKLE 360
           TSASCLGHPQDPFKATDIQIAPPSSSLDHHQIDSISEIYESKPLLTTDIDKKFDSSPKLE
Sbjct: 301 TSASCLGHPQDPFKATDIQIAPPSSSLDHHQIDSISEIYESKPLLTTDIDKKFDSSPKLE 360

Query: 361 RLSPLSPTTQGISLGRNSPYG 382
           RLSPLSPTTQGISLGRNSPYG
Sbjct: 361 RLSPLSPTTQGISLGRNSPYG 381

[Close]

BLAST of Spo12352.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C3G0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g157810 PE=4 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 2.000e-159
Identity = 319/414 (77.05%), Postives = 341/414 (82.37%), Query Frame = 1


		  
Query: 1   MFHHPKKPSSMTSNERTSSMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDK 60
           MFHHPKKPSSM SNERT+SMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDK
Sbjct: 1   MFHHPKKPSSMNSNERTTSMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDK 60

Query: 61  ATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFSDHHSVKDASSLELQRNTASSSG 120
           ATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHK+F+D HSVKDAS++ELQRN+ASSSG
Sbjct: 61  ATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFND-HSVKDASAMELQRNSASSSG 120

Query: 121 LMGRSMNHDSNVHISDALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTL 180
           LMGRSMN D+NVHISDALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTL
Sbjct: 121 LMGRSMN-DNNVHISDALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTL 180

Query: 181 AGETNMAASGSYN--NKGNNNLLGNNSPTMVDHLGGSMKEFGPMNFPSLQDLNIYGGEQQ 240
           AGETNM AS SYN  N  NNNL  NNS    DHL GSMKEFG MNFPSLQDLNIYGGEQ 
Sbjct: 181 AGETNMTASASYNKGNNNNNNLSSNNSSMAADHLSGSMKEFGTMNFPSLQDLNIYGGEQP 240

Query: 241 LDLHPSMDRSSSFENFMQV-PNDSLCLG-QKKRPNIY--------NNGNNNGKSPLMWSD 300
           LDLH S+DRSSS ENFMQ+ P+D+L LG  KKR N +        NN NNNGKSP++WSD
Sbjct: 241 LDLHQSIDRSSSLENFMQLAPSDNLYLGNNKKRSNPFNNNVNNNNNNNNNNGKSPIIWSD 300

Query: 301 NDHLRLQELGPPTSASCLG-------HPQDPFKATDIQIAPP----------SSSLDHHQ 360
            DHLRLQELGPPT  +CLG       H +  FKA DIQIAPP          SS+ D HQ
Sbjct: 301 -DHLRLQELGPPT-PTCLGPQDHHHHHQEHLFKAGDIQIAPPSLDHHHHHHRSSNNDDHQ 360

Query: 361 IDSISEIYESKPLLTTDI----DKKFDSSPKLERLSPLSPTTQGISLGRNSPYG 382
           IDSISEIY+SKP+LT+DI    DKKF+SS KLER   LSP  QG +LGRNS YG
Sbjct: 361 IDSISEIYDSKPILTSDIVVGVDKKFESSTKLER---LSPARQGTTLGRNSTYG 407

[Close]

BLAST of Spo12352.1 vs. UniProtKB/TrEMBL
Match: W9R1F0_9ROSA (Myb family transcription factor APL OS=Morus notabilis GN=L484_019239 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 1.800e-115
Identity = 261/395 (66.08%), Postives = 302/395 (76.46%), Query Frame = 1


		  
Query: 1   MFHHPKKPSSMTSNERTSSMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDK 60
           MF H KKPS+M S++R   MCVQ DSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDK
Sbjct: 1   MFQH-KKPSTMNSHDRP--MCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDK 60

Query: 61  ATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFSDHHSVKDASSLELQRNTASSSG 120
           ATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHK+F+D HS+KDAS+LELQRNTASSSG
Sbjct: 61  ATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFND-HSIKDASALELQRNTASSSG 120

Query: 121 LMGRSMNHDSNVHISDALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTL 180
           ++ RSMN   N HI DA+RMQMEVQRRL EQLEVQ+HLQLRIEAQGKYMQ+ILEKACQTL
Sbjct: 121 MISRSMN--DNSHIVDAIRMQMEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKACQTL 180

Query: 181 AGETNMAASGSYNNKGNNNLLGNNSPTMVDHLGGSMKEF-GPMNFPSLQDLNIYGGEQQL 240
           AGE +M AS + N KG+    G N   M     G++K+F  P+ FPS QDLNIYGG+ QL
Sbjct: 181 AGENSM-ASAAGNYKGSIVNHGVNPHDM-----GTLKDFTAPLGFPSFQDLNIYGGD-QL 240

Query: 241 DLHPSMDRSSSFENFMQVPNDSLCLGQKKRPNIYNNGNNNGKSPLMWSDNDHLRLQELGP 300
           DL  SMDR S    F+   ND+LCLG KKRP+ YN   + GKSPLMWSD+  LRLQ+LG 
Sbjct: 241 DLQQSMDRPSIDHGFLP-NNDNLCLG-KKRPSPYN--GSTGKSPLMWSDD--LRLQDLG- 300

Query: 301 PTSASCLGHP-QDPFKATDIQIAPPSSSLDHHQIDSISEIYESKPLLTTDI--DKKFD-S 360
            T+ASCLG P  DPFK   IQ+APPS      +IDS+S+IYE+KP+++ +   +KK+D +
Sbjct: 301 -TAASCLGPPDHDPFKGDQIQMAPPSIERG-TEIDSLSDIYETKPVISGEHMGEKKYDVA 360

Query: 361 SPKLERLSP---------LSPTTQGISLGRNSPYG 382
             KLER SP         +SP  Q    GRNSP+G
Sbjct: 361 GAKLERPSPRRVPLAGERMSPMIQ----GRNSPFG 369

[Close]

BLAST of Spo12352.1 vs. UniProtKB/TrEMBL
Match: A0A061FAD9_THECC (Homeodomain-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_033672 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 5.300e-115
Identity = 254/390 (65.13%), Postives = 293/390 (75.13%), Query Frame = 1


		  
Query: 5   PKKPSSMTSNERTSSMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPK 64
           PKKPS+M S++R  +MCVQ DSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPK
Sbjct: 4   PKKPSTMNSHDR--AMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPK 63

Query: 65  TIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFSDHHSVKDASSLELQRNTASSSGLMGR 124
           TIMRVMGVKGLTLYHLKSHLQKFRLGKQPHK+F+D HS+KD    +LQRN ASSSG++ R
Sbjct: 64  TIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFND-HSIKD----DLQRNAASSSGMIAR 123

Query: 125 SMNHDSNVHISDALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTLAGET 184
           SMN   N H+ DA RMQMEVQRR+ EQLEVQRHLQLRIEAQGKYMQ+ILEKACQTLAGE 
Sbjct: 124 SMN--DNSHMVDATRMQMEVQRRIHEQLEVQRHLQLRIEAQGKYMQSILEKACQTLAGE- 183

Query: 185 NMAASGSYNNKGNNNLLGNNSPTMVDHLGGSMKEFGPMNFPSLQDLNIYGGEQQLDLHPS 244
           NMAA G Y   GN  +     P M     G+MK+FGP+NFP  QDLNIYGG+ QLDL  +
Sbjct: 184 NMAA-GGYKGMGNQGV-----PDM-----GAMKDFGPLNFPPFQDLNIYGGD-QLDLQQN 243

Query: 245 MDRSSSFENFMQVPNDSLCLGQKKRPNIYNNGNNNGKSPLMWSDNDHLRLQELGPPTSAS 304
           MDR  S + FM   ND++CLG KKR + Y   + +GKSPL+WS  D LRLQ+LG  T+AS
Sbjct: 244 MDR-PSLDAFMP-NNDNICLG-KKRASPY---SGSGKSPLIWS--DELRLQDLG--TAAS 303

Query: 305 CLGHPQDPFKATDIQIAPPSSSLDHHQIDSISEIYESKPLLTTD--IDKKFDSSPKLERL 364
           CLG   DPFK+  IQIAPPS       +D IS+IYE+KP+L+ D   DKK+++SPKLER 
Sbjct: 304 CLGPQDDPFKSEQIQIAPPSIDRS-TDLDPISDIYEAKPVLSGDGMGDKKYEASPKLERP 360

Query: 365 SPLSPTTQ-----------GISLGRNSPYG 382
           SP     Q            ++ GRNSPYG
Sbjct: 364 SPRRAPLQADRMNPMINSGSVAQGRNSPYG 360

[Close]

BLAST of Spo12352.1 vs. UniProtKB/TrEMBL
Match: M5WFT9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007417mg PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 5.300e-115
Identity = 253/398 (63.57%), Postives = 297/398 (74.62%), Query Frame = 1


		  
Query: 1   MFHHP----KKPSSMTSNERTSSMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLG 60
           MF HP    KKPS+M S++R   MCVQ DSGLVLTTDPKPRLRWTVELHERFVDAVTQLG
Sbjct: 1   MFQHPHQHHKKPSTMNSHDRP--MCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLG 60

Query: 61  GPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFSDHHSVKDASSLELQRNTA 120
           GPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHK+F+DH     AS L+LQRN+A
Sbjct: 61  GPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSLKDHASPLDLQRNSA 120

Query: 121 SSSGLMGRSMNHDSNVHISDALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKA 180
           SSS ++GRSMN            MQMEVQRRL EQLEVQ+HLQLRIEAQGKYMQ+ILEKA
Sbjct: 121 SSSAMIGRSMN-----------EMQMEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKA 180

Query: 181 CQTLAGETNM-AASGSYNNKGNNNLLGNNSPTMVDHLGGSMKEF-GPMNFPSLQDLNIYG 240
           CQTLAGE NM AA+GSY  KGN   +GN      D   G++K+F  P+NFPS QDLNIYG
Sbjct: 181 CQTLAGENNMAAAAGSY--KGN---IGNQGVNPADM--GALKDFNSPLNFPSFQDLNIYG 240

Query: 241 GEQQLDLHPSMDRSSSFENFMQVPNDSLCLGQKKRPNIYNNGNNNGKSPLMWSDNDHLRL 300
           G+  LDL  ++DR     +FM   ++S+CLG KKRP+ Y   + +GKSPL+WSD+  LRL
Sbjct: 241 GD-HLDLQQNLDRPPLDHSFMPSNDNSICLGPKKRPSPY---SGSGKSPLIWSDD--LRL 300

Query: 301 QELGPPTSASCLGHPQDPFKATD-IQIAPPSSSLDHHQIDSISEIYESKPLLTTDIDKKF 360
           Q+LG  T+ASCLG   DPFK++D IQIAPPS      ++DSIS+IYESKP++  + DKKF
Sbjct: 301 QDLG--TAASCLGPQDDPFKSSDSIQIAPPSIERG-SEMDSISDIYESKPMIQGE-DKKF 360

Query: 361 DSSPKLERLSP---------LSP-TTQGISLGRNSPYG 382
           DS+ KLER SP         ++P    G+  GRNSP+G
Sbjct: 361 DSANKLERPSPRRTPLGSDRMNPMINTGVRQGRNSPFG 368

[Close]

BLAST of Spo12352.1 vs. ExPASy Swiss-Prot
Match: APL_ARATH (Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL PE=1 SV=2)

HSP 1 Score: 314.3 bits (804), Expect = 1.800e-84
Identity = 209/390 (53.59%), Postives = 245/390 (62.82%), Query Frame = 1


		  
Query: 4   HPKKPSSMTSNERTSSMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATP 63
           H KKPSSM  +    +MCVQ DSGLVLTTDPKPRLRWTVELHERFVDAV QLGGPDKATP
Sbjct: 3   HAKKPSSMNGSYENRAMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATP 62

Query: 64  KTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFSDHHSVKD--ASSLELQRNTASSSGL 123
           KTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHK++ DH + +   AS++++QRN ASSSG+
Sbjct: 63  KTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEYGDHSTKEGSRASAMDIQRNVASSSGM 122

Query: 124 MGRSMNHDSNVHISDALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTLA 183
           M R+MN            MQMEVQRRL EQLEVQRHLQLRIEAQGKYMQ+ILE+ACQTLA
Sbjct: 123 MSRNMNE-----------MQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQSILERACQTLA 182

Query: 184 GETNMAASGSYNNKGNNNLLGNNSPTMVDHLGGSMKEFGPMNFPSLQDLNIYGG--EQQL 243
           GE NMAA+ +    G     GN   + +    G      P++FP  QDLNIYG   +Q L
Sbjct: 183 GE-NMAAATAAAAVG-GGYKGNLGSSSLSAAVGPPPH--PLSFPPFQDLNIYGNTTDQVL 242

Query: 244 DLHPSMDRSSSFENFM---QVPNDSLCLGQKKRPNIYNNGNNNGKSPLMWSDNDHLRLQE 303
           D H       + EN        + ++ LG KKRPN  N GN+  K  LMWSD DH    +
Sbjct: 243 DHHNF--HHQNIENHFTGNNAADTNIYLG-KKRPN-PNFGNDVRKGLLMWSDQDH----D 302

Query: 304 LGPPTSASCLGHPQDPFKATDIQIAPPSSSLDHHQIDSISEIYESKPLLTTDIDKKFDS- 363
           L    S        D      IQ+A   S+     +DS+SEIYE K  L+ D        
Sbjct: 303 LSANQSI-------DDEHRIQIQMATHVST----DLDSLSEIYERKSGLSGDEGNNGGKL 358

Query: 364 ----SPKLERLSPLSPTTQGISLGRNSPYG 382
               SP+   LSP+     G+  GRNSP+G
Sbjct: 363 LERPSPRRSPLSPMMNPNGGLIQGRNSPFG 358

[Close]

BLAST of Spo12352.1 vs. ExPASy Swiss-Prot
Match: PHL2_ARATH (Protein PHR1-LIKE 2 OS=Arabidopsis thaliana GN=PHL2 PE=1 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.500e-50
Identity = 109/156 (69.87%), Postives = 126/156 (80.77%), Query Frame = 1


		  
Query: 25  DSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHL 84
           D+ LVLTTDPKPRLRWT ELHERFVDAVTQLGGPDKATPKTIMR MGVKGLTLYHLKSHL
Sbjct: 31  DACLVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL 90

Query: 85  QKFRLGKQPHKDFSDHHSVKDASSLELQRNTASSSGLMGRSMNHDSN--VHISDALRMQM 144
           QKFRLG+Q  K+ +++   KDAS +   ++T SSS    R    + N    +++ALR QM
Sbjct: 91  QKFRLGRQAGKESTENS--KDASCVGESQDTGSSSTSSMRMAQQEQNEGYQVTEALRAQM 150

Query: 145 EVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQ 179
           EVQRRL +QLEVQR LQLRIEAQGKY+Q+ILEKAC+
Sbjct: 151 EVQRRLHDQLEVQRRLQLRIEAQGKYLQSILEKACK 184

[Close]

BLAST of Spo12352.1 vs. ExPASy Swiss-Prot
Match: PHL3_ARATH (Protein PHR1-LIKE 3 OS=Arabidopsis thaliana GN=PHL3 PE=1 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 8.500e-50
Identity = 109/158 (68.99%), Postives = 126/158 (79.75%), Query Frame = 1


		  
Query: 25  DSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHL 84
           D+ LVLTTDPKPRLRWT ELHERFVDAVTQLGGPDKATPKTIMR MGVKGLTLYHLKSHL
Sbjct: 27  DACLVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL 86

Query: 85  QKFRLGKQPHKDFSDHHSVKDASSLELQRNTASS--SGLMGRSMNHDSNVHISDALRMQM 144
           QKFRLG+Q  K+  D+   KD S +   ++T SS  S L   +   + +  +++ALR QM
Sbjct: 87  QKFRLGRQSCKESIDNS--KDVSCVAESQDTGSSSTSSLRLAAQEQNESYQVTEALRAQM 146

Query: 145 EVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTL 181
           EVQRRL EQLEVQR LQLRIEAQGKY+Q+ILEKAC+ +
Sbjct: 147 EVQRRLHEQLEVQRRLQLRIEAQGKYLQSILEKACKAI 182

[Close]

BLAST of Spo12352.1 vs. ExPASy Swiss-Prot
Match: PHLC_ARATH (Myb family transcription factor PHL12 OS=Arabidopsis thaliana GN=PHL12 PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.200e-48
Identity = 114/213 (53.52%), Postives = 141/213 (66.20%), Query Frame = 1


		  
Query: 24  NDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSH 83
           + SGLVLTTDPKPRLRWT ELHERFVDAVT LGGP+KATPKTIMRVMGVKGLTLYHLKSH
Sbjct: 12  SSSGLVLTTDPKPRLRWTTELHERFVDAVTHLGGPEKATPKTIMRVMGVKGLTLYHLKSH 71

Query: 84  LQKFRLGKQPHKDFSDHHSV-----KDASSLELQRNT--ASSSGLMGRSMNHDSNVHISD 143
           LQKFRLGKQPHK+ S +HS+       AS L+L+RN    +S  ++GR+MN         
Sbjct: 72  LQKFRLGKQPHKEHSQNHSICIRDTNRASMLDLRRNAVFTTSPLIIGRNMN--------- 131

Query: 144 ALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTLAGETNMAASGSYNNKG 203
              MQMEVQRR++E++ ++R +  RI AQGKYM+++LEKAC+T         S  + ++ 
Sbjct: 132 --EMQMEVQRRIEEEVVIERQVNQRIAAQGKYMESMLEKACETQEASLTKDYSTLFFDRT 191

Query: 204 N--NNLLGNNSPTMVDHLGGSMKEFGPMNFPSL 228
           N  NN      P   DH   S      +  P +
Sbjct: 192 NICNNTSSIPIPWFEDHFPSSSSMDSTLILPDI 213

[Close]

BLAST of Spo12352.1 vs. ExPASy Swiss-Prot
Match: PHLA_ARATH (Myb-related protein 1 OS=Arabidopsis thaliana GN=MYR1 PE=1 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.700e-43
Identity = 102/171 (59.65%), Postives = 124/171 (72.51%), Query Frame = 1


		  
Query: 25  DSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHL 84
           DSGL+L+TD KPRL+WT +LHERFV+AV QLGG DKATPKTIM+VMG+ GLTLYHLKSHL
Sbjct: 35  DSGLILSTDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSHL 94

Query: 85  QKFRLGKQPHKDFSDHHSVKDASSLELQRNTA-----SSSGLMGRSMNHDSNVHISDALR 144
           QK+RL K  +   +   S+   S + +          S S  +        N+ ISDAL+
Sbjct: 95  QKYRLSKNLNGQANS--SLNKTSVMTMVEENPPEVDESHSESLSIGPQPSMNLPISDALQ 154

Query: 145 MQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTLAGETNMAASG 191
           MQ+EVQRRL EQLEVQRHLQLRIEAQGKY+Q+ILEKA +TL G  N+ A+G
Sbjct: 155 MQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSILEKAQETL-GRQNLGAAG 202

[Close]

BLAST of Spo12352.1 vs. TAIR (Arabidopsis)
Match: AT1G79430.2 (Homeodomain-like superfamily protein)

HSP 1 Score: 314.3 bits (804), Expect = 1.000e-85
Identity = 209/390 (53.59%), Postives = 245/390 (62.82%), Query Frame = 1


		  
Query: 4   HPKKPSSMTSNERTSSMCVQNDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATP 63
           H KKPSSM  +    +MCVQ DSGLVLTTDPKPRLRWTVELHERFVDAV QLGGPDKATP
Sbjct: 3   HAKKPSSMNGSYENRAMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATP 62

Query: 64  KTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFSDHHSVKD--ASSLELQRNTASSSGL 123
           KTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHK++ DH + +   AS++++QRN ASSSG+
Sbjct: 63  KTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEYGDHSTKEGSRASAMDIQRNVASSSGM 122

Query: 124 MGRSMNHDSNVHISDALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTLA 183
           M R+MN            MQMEVQRRL EQLEVQRHLQLRIEAQGKYMQ+ILE+ACQTLA
Sbjct: 123 MSRNMNE-----------MQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQSILERACQTLA 182

Query: 184 GETNMAASGSYNNKGNNNLLGNNSPTMVDHLGGSMKEFGPMNFPSLQDLNIYGG--EQQL 243
           GE NMAA+ +    G     GN   + +    G      P++FP  QDLNIYG   +Q L
Sbjct: 183 GE-NMAAATAAAAVG-GGYKGNLGSSSLSAAVGPPPH--PLSFPPFQDLNIYGNTTDQVL 242

Query: 244 DLHPSMDRSSSFENFM---QVPNDSLCLGQKKRPNIYNNGNNNGKSPLMWSDNDHLRLQE 303
           D H       + EN        + ++ LG KKRPN  N GN+  K  LMWSD DH    +
Sbjct: 243 DHHNF--HHQNIENHFTGNNAADTNIYLG-KKRPN-PNFGNDVRKGLLMWSDQDH----D 302

Query: 304 LGPPTSASCLGHPQDPFKATDIQIAPPSSSLDHHQIDSISEIYESKPLLTTDIDKKFDS- 363
           L    S        D      IQ+A   S+     +DS+SEIYE K  L+ D        
Sbjct: 303 LSANQSI-------DDEHRIQIQMATHVST----DLDSLSEIYERKSGLSGDEGNNGGKL 358

Query: 364 ----SPKLERLSPLSPTTQGISLGRNSPYG 382
               SP+   LSP+     G+  GRNSP+G
Sbjct: 363 LERPSPRRSPLSPMMNPNGGLIQGRNSPFG 358

[Close]

BLAST of Spo12352.1 vs. TAIR (Arabidopsis)
Match: AT3G12730.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 195.3 bits (495), Expect = 6.900e-50
Identity = 114/213 (53.52%), Postives = 141/213 (66.20%), Query Frame = 1


		  
Query: 24  NDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSH 83
           + SGLVLTTDPKPRLRWT ELHERFVDAVT LGGP+KATPKTIMRVMGVKGLTLYHLKSH
Sbjct: 12  SSSGLVLTTDPKPRLRWTTELHERFVDAVTHLGGPEKATPKTIMRVMGVKGLTLYHLKSH 71

Query: 84  LQKFRLGKQPHKDFSDHHSV-----KDASSLELQRNT--ASSSGLMGRSMNHDSNVHISD 143
           LQKFRLGKQPHK+ S +HS+       AS L+L+RN    +S  ++GR+MN         
Sbjct: 72  LQKFRLGKQPHKEHSQNHSICIRDTNRASMLDLRRNAVFTTSPLIIGRNMN--------- 131

Query: 144 ALRMQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTLAGETNMAASGSYNNKG 203
              MQMEVQRR++E++ ++R +  RI AQGKYM+++LEKAC+T         S  + ++ 
Sbjct: 132 --EMQMEVQRRIEEEVVIERQVNQRIAAQGKYMESMLEKACETQEASLTKDYSTLFFDRT 191

Query: 204 N--NNLLGNNSPTMVDHLGGSMKEFGPMNFPSL 228
           N  NN      P   DH   S      +  P +
Sbjct: 192 NICNNTSSIPIPWFEDHFPSSSSMDSTLILPDI 213

[Close]

BLAST of Spo12352.1 vs. TAIR (Arabidopsis)
Match: AT3G24120.2 (Homeodomain-like superfamily protein)

HSP 1 Score: 194.1 bits (492), Expect = 1.500e-49
Identity = 109/159 (68.55%), Postives = 126/159 (79.25%), Query Frame = 1


		  
Query: 25  DSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHL 84
           D+ LVLTTDPKPRLRWT ELHERFVDAVTQLGGPDKATPKTIMR MGVKGLTLYHLKSHL
Sbjct: 31  DACLVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL 90

Query: 85  QKFRLGKQPHKDFSDHHSVKDASSLELQRNTASSSGLMGRSMNHDSN--VHISDALRMQM 144
           QKFRLG+Q  K+ +++   KDAS +   ++T SSS    R    + N    +++ALR QM
Sbjct: 91  QKFRLGRQAGKESTENS--KDASCVGESQDTGSSSTSSMRMAQQEQNEGYQVTEALRAQM 150

Query: 145 EVQRRLQEQLE---VQRHLQLRIEAQGKYMQNILEKACQ 179
           EVQRRL +QLE   VQR LQLRIEAQGKY+Q+ILEKAC+
Sbjct: 151 EVQRRLHDQLEYGQVQRRLQLRIEAQGKYLQSILEKACK 187

[Close]

BLAST of Spo12352.1 vs. TAIR (Arabidopsis)
Match: AT4G13640.2 (Homeodomain-like superfamily protein)

HSP 1 Score: 193.7 bits (491), Expect = 2.000e-49
Identity = 109/161 (67.70%), Postives = 126/161 (78.26%), Query Frame = 1


		  
Query: 25  DSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHL 84
           D+ LVLTTDPKPRLRWT ELHERFVDAVTQLGGPDKATPKTIMR MGVKGLTLYHLKSHL
Sbjct: 27  DACLVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL 86

Query: 85  QKFRLGKQPHKDFSDHHSVKDASSLELQRNTASS--SGLMGRSMNHDSNVHISDALRMQM 144
           QKFRLG+Q  K+  D+   KD S +   ++T SS  S L   +   + +  +++ALR QM
Sbjct: 87  QKFRLGRQSCKESIDNS--KDVSCVAESQDTGSSSTSSLRLAAQEQNESYQVTEALRAQM 146

Query: 145 EVQRRLQEQLE---VQRHLQLRIEAQGKYMQNILEKACQTL 181
           EVQRRL EQLE   VQR LQLRIEAQGKY+Q+ILEKAC+ +
Sbjct: 147 EVQRRLHEQLEYTQVQRRLQLRIEAQGKYLQSILEKACKAI 185

[Close]

BLAST of Spo12352.1 vs. TAIR (Arabidopsis)
Match: AT5G18240.1 (myb-related protein 1)

HSP 1 Score: 177.6 bits (449), Expect = 1.500e-44
Identity = 102/171 (59.65%), Postives = 124/171 (72.51%), Query Frame = 1


		  
Query: 25  DSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHL 84
           DSGL+L+TD KPRL+WT +LHERFV+AV QLGG DKATPKTIM+VMG+ GLTLYHLKSHL
Sbjct: 35  DSGLILSTDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSHL 94

Query: 85  QKFRLGKQPHKDFSDHHSVKDASSLELQRNTA-----SSSGLMGRSMNHDSNVHISDALR 144
           QK+RL K  +   +   S+   S + +          S S  +        N+ ISDAL+
Sbjct: 95  QKYRLSKNLNGQANS--SLNKTSVMTMVEENPPEVDESHSESLSIGPQPSMNLPISDALQ 154

Query: 145 MQMEVQRRLQEQLEVQRHLQLRIEAQGKYMQNILEKACQTLAGETNMAASG 191
           MQ+EVQRRL EQLEVQRHLQLRIEAQGKY+Q+ILEKA +TL G  N+ A+G
Sbjct: 155 MQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSILEKAQETL-GRQNLGAAG 202

The following BLAST results are available for this feature:

BLAST of Spo12352.1 vs. NCBI nr
BLAST of Spo12352.1 vs. UniProtKB/TrEMBL
BLAST of Spo12352.1 vs. ExPASy Swiss-Prot
BLAST of Spo12352.1 vs. TAIR (Arabidopsis)

BLAST of Spo12352.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902228841\|gb\|KNA21280.1\|	2.4e-217	100.	hypothetical protein SOVF_0443...	[more]
gi\|731344728\|ref\|XP_010683575.1\|	2.9e-159	77.0	PREDICTED: myb family transcri...	[more]
gi\|731344726\|ref\|XP_010683574.1\|	1.2e-157	76.5	PREDICTED: myb family transcri...	[more]
gi\|747095753\|ref\|XP_011095765.1\|	6.2e-117	66.2	PREDICTED: myb family transcri...	[more]
gi\|703084456\|ref\|XP_010092480.1\|	2.6e-115	66.0	Myb family transcription facto...	[more]

BLAST of Spo12352.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RP23_SPIOL	1.6e-217	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8C3G0_BETVU	2.0e-159	77.0	Uncharacterized protein OS=Bet...	[more]
W9R1F0_9ROSA	1.8e-115	66.0	Myb family transcription facto...	[more]
A0A061FAD9_THECC	5.3e-115	65.1	Homeodomain-like superfamily p...	[more]
M5WFT9_PRUPE	5.3e-115	63.5	Uncharacterized protein OS=Pru...	[more]

BLAST of Spo12352.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
APL_ARATH	1.8e-84	53.5	Myb family transcription facto...	[more]
PHL2_ARATH	6.5e-50	69.8	Protein PHR1-LIKE 2 OS=Arabido...	[more]
PHL3_ARATH	8.5e-50	68.9	Protein PHR1-LIKE 3 OS=Arabido...	[more]
PHLC_ARATH	1.2e-48	53.5	Myb family transcription facto...	[more]
PHLA_ARATH	2.7e-43	59.6	Myb-related protein 1 OS=Arabi...	[more]

BLAST of Spo12352.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G79430.2	1.0e-85	53.5	Homeodomain-like superfamily p...	[more]
AT3G12730.1	6.9e-50	53.5	Homeodomain-like superfamily p...	[more]
AT3G24120.2	1.5e-49	68.5	Homeodomain-like superfamily p...	[more]
AT4G13640.2	2.0e-49	67.7	Homeodomain-like superfamily p...	[more]
AT5G18240.1	1.5e-44	59.6	myb-related protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 37..87 score: 1.
IPR006447	Myb domain, plants	TIGRFAMs	TIGR01557	TIGR01557	coord: 35..90 score: 1.2
IPR009057	Homeodomain-like	GENE3D	1.10.10.60		coord: 32..90 score: 3.7
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 34..90 score: 1.79
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 32..92 score: 12
IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain	PFAM	PF14379	Myb_CC_LHEQLE	coord: 132..179 score: 4.0
None	No IPR available	PANTHER	PTHR31499	FAMILY NOT NAMED	coord: 8..364 score: 7.7E
None	No IPR available	PANTHER	PTHR31499:SF2	MYB FAMILY TRANSCRIPTION FACTOR APL	coord: 8..364 score: 7.7E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010087	phloem or xylem histogenesis
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0065007	biological regulation
biological_process	GO:0009987	cellular process
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0050896	response to stimulus
biological_process	GO:0010413	glucuronoxylan metabolic process
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0045492	xylan biosynthetic process
cellular_component	GO:0000785	chromatin
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0004674	protein serine/threonine kinase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo26757	0.69	Barchart \| Table
Spo05952	0.67	Barchart \| Table
Spo06216	0.67	Barchart \| Table
Spo23095	0.66	Barchart \| Table
Spo24645	0.65	Barchart \| Table