Spo12339 (gene)

Overview
NameSpo12339
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUbiquitin ligase protein
LocationSpoScf_00950 : 200520 .. 201239 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTCGAAAAGCAGTTTGAGCAGAAATTGAAATCTATCCCAGCTGCACCAAAAGAAGCAGAAAATCTGAATGGCTCTTTTGACTGCAATATCTGCTTGGATTTTGCCGATGAACCTGTAGTCACCTTTTGTGGGCACCTATACTGCTGGCCTTGCATCTACAAGTGGTTTCACGTCCAAAGTGCTTCTCTTCCATCTGACGAGTATCCACAATGCCCGGTTTGCAAGACCGAAATCTCTCACACAACTGTGGTCCCACTGTATGGCCGAGGCCAATCCCTGACCAATCCTGAACGCGAGGCTAAGTCACCTTCCCAGGGTGGGAGTGTGCCTCCCAGACCGACAGCATGTGGGACCCGTGCTTTGTTAAATGCTGCATCTCAGCCTAGCCACCAGCTCCCCCCACACCGTAATCCTTATCAACAACCCTTTGTAACAGGCTATGTTCACCCGTATGATGGGTCTGACGTAGTTTCTTCCTCATCATCGCTCAACCAAAATATTACTCAACCTTCTGTTGATGGTATGTTCGGGGAGATGGTGTATGCAAGGGTGTTTGGCAACTCGCAGAGCTTGTACTCATATCCGAATTCATATACTGCAGCAGGGAGCAGTAATCCTAGGGTAAGAAGGCATGAAATGCAAGTTCACAAGTCCCTAAATAGGGTTTCAATCTTCCTTCTGTGTTGCTTCATTCTTTGCCTGGCCTTTTTCTGA

mRNA sequence

ATGGAAGTCGAAAAGCAGTTTGAGCAGAAATTGAAATCTATCCCAGCTGCACCAAAAGAAGCAGAAAATCTGAATGGCTCTTTTGACTGCAATATCTGCTTGGATTTTGCCGATGAACCTGTAGTCACCTTTTGTGGGCACCTATACTGCTGGCCTTGCATCTACAAGTGGTTTCACGTCCAAAGTGCTTCTCTTCCATCTGACGAGTATCCACAATGCCCGGTTTGCAAGACCGAAATCTCTCACACAACTGTGGTCCCACTGTATGGCCGAGGCCAATCCCTGACCAATCCTGAACGCGAGGCTAAGTCACCTTCCCAGGGTGGGAGTGTGCCTCCCAGACCGACAGCATGTGGGACCCGTGCTTTGTTAAATGCTGCATCTCAGCCTAGCCACCAGCTCCCCCCACACCGTAATCCTTATCAACAACCCTTTGTAACAGGCTATGTTCACCCGTATGATGGGTCTGACGTAGTTTCTTCCTCATCATCGCTCAACCAAAATATTACTCAACCTTCTGTTGATGGTATGTTCGGGGAGATGGTGTATGCAAGGGTGTTTGGCAACTCGCAGAGCTTGTACTCATATCCGAATTCATATACTGCAGCAGGGAGCAGTAATCCTAGGGTAAGAAGGCATGAAATGCAAGTTCACAAGTCCCTAAATAGGGTTTCAATCTTCCTTCTGTGTTGCTTCATTCTTTGCCTGGCCTTTTTCTGA

Coding sequence (CDS)

ATGGAAGTCGAAAAGCAGTTTGAGCAGAAATTGAAATCTATCCCAGCTGCACCAAAAGAAGCAGAAAATCTGAATGGCTCTTTTGACTGCAATATCTGCTTGGATTTTGCCGATGAACCTGTAGTCACCTTTTGTGGGCACCTATACTGCTGGCCTTGCATCTACAAGTGGTTTCACGTCCAAAGTGCTTCTCTTCCATCTGACGAGTATCCACAATGCCCGGTTTGCAAGACCGAAATCTCTCACACAACTGTGGTCCCACTGTATGGCCGAGGCCAATCCCTGACCAATCCTGAACGCGAGGCTAAGTCACCTTCCCAGGGTGGGAGTGTGCCTCCCAGACCGACAGCATGTGGGACCCGTGCTTTGTTAAATGCTGCATCTCAGCCTAGCCACCAGCTCCCCCCACACCGTAATCCTTATCAACAACCCTTTGTAACAGGCTATGTTCACCCGTATGATGGGTCTGACGTAGTTTCTTCCTCATCATCGCTCAACCAAAATATTACTCAACCTTCTGTTGATGGTATGTTCGGGGAGATGGTGTATGCAAGGGTGTTTGGCAACTCGCAGAGCTTGTACTCATATCCGAATTCATATACTGCAGCAGGGAGCAGTAATCCTAGGGTAAGAAGGCATGAAATGCAAGTTCACAAGTCCCTAAATAGGGTTTCAATCTTCCTTCTGTGTTGCTTCATTCTTTGCCTGGCCTTTTTCTGA

Protein sequence

MEVEKQFEQKLKSIPAAPKEAENLNGSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHVQSASLPSDEYPQCPVCKTEISHTTVVPLYGRGQSLTNPEREAKSPSQGGSVPPRPTACGTRALLNAASQPSHQLPPHRNPYQQPFVTGYVHPYDGSDVVSSSSSLNQNITQPSVDGMFGEMVYARVFGNSQSLYSYPNSYTAAGSSNPRVRRHEMQVHKSLNRVSIFLLCCFILCLAFF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo12339.1Spo12339.1mRNA


Homology
BLAST of Spo12339.1 vs. NCBI nr
Match: gi|902158755|gb|KNA06253.1| (hypothetical protein SOVF_182800 [Spinacia oleracea])

HSP 1 Score: 498.0 bits (1281), Expect = 8.900e-138
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 1

		  

Query: 1   MEVEKQFEQKLKSIPAAPKEAENLNGSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHV 60
           MEVEKQFEQKLKSIPAAPKEAENLNGSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHV
Sbjct: 1   MEVEKQFEQKLKSIPAAPKEAENLNGSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHV 60

Query: 61  QSASLPSDEYPQCPVCKTEISHTTVVPLYGRGQSLTNPEREAKSPSQGGSVPPRPTACGT 120
           QSASLPSDEYPQCPVCKTEISHTTVVPLYGRGQSLTNPEREAKSPSQGGSVPPRPTACGT
Sbjct: 61  QSASLPSDEYPQCPVCKTEISHTTVVPLYGRGQSLTNPEREAKSPSQGGSVPPRPTACGT 120

Query: 121 RALLNAASQPSHQLPPHRNPYQQPFVTGYVHPYDGSDVVSSSSSLNQNITQPSVDGMFGE 180
           RALLNAASQPSHQLPPHRNPYQQPFVTGYVHPYDGSDVVSSSSSLNQNITQPSVDGMFGE
Sbjct: 121 RALLNAASQPSHQLPPHRNPYQQPFVTGYVHPYDGSDVVSSSSSLNQNITQPSVDGMFGE 180

Query: 181 MVYARVFGNSQSLYSYPNSYTAAGSSNPRVRRHEMQVHKSLNRVSIFLLCCFILCLAFF 240
           MVYARVFGNSQSLYSYPNSYTAAGSSNPRVRRHEMQVHKSLNRVSIFLLCCFILCLAFF
Sbjct: 181 MVYARVFGNSQSLYSYPNSYTAAGSSNPRVRRHEMQVHKSLNRVSIFLLCCFILCLAFF 239

BLAST of Spo12339.1 vs. NCBI nr
Match: gi|731350435|ref|XP_010686501.1| (PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 369.0 bits (946), Expect = 6.200e-99
Identity = 183/240 (76.25%), Postives = 199/240 (82.92%), Query Frame = 1

		  

Query: 1   MEVEKQFEQKLKSIPAAPKEAENLNGSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHV 60
           M VE+QF+QK  SI   PKEAE LNGSFDCNICLDFA+EPVVT CGHLYCWPCIYKWFHV
Sbjct: 1   MAVEQQFDQKWNSIADVPKEAEFLNGSFDCNICLDFANEPVVTLCGHLYCWPCIYKWFHV 60

Query: 61  QSASLPSDEYPQCPVCKTEISHTTVVPLYGRGQSLTNPEREAKSPSQGGSVPPRPTACGT 120
           QSASLPSDEYPQCPVCK +ISHTTVVPLYGRGQS TNPE E K+PS+G   PPRP ACGT
Sbjct: 61  QSASLPSDEYPQCPVCKADISHTTVVPLYGRGQSQTNPECETKAPSRGPGTPPRPPACGT 120

Query: 121 RALLNAASQPSHQLPPHRNPYQQPFVTGYVHPYDGS-DVVSSSSSLNQNITQPSVDGMFG 180
           RALLNAASQPS+QL P+RNPYQ P    YVH Y+GS +VVSS+SSLNQ        G+FG
Sbjct: 121 RALLNAASQPSNQLMPYRNPYQPP----YVHAYNGSEEVVSSTSSLNQTSDAVQSVGVFG 180

Query: 181 EMVYARVFGNSQSLYSYPNSYTAAGSSNPRVRRHEMQVHKSLNRVSIFLLCCFILCLAFF 240
           EMVYARVFGNSQSLY+Y NSY   GS+NPR+RR EMQV KSLNRVS+FL CCFILCL  F
Sbjct: 181 EMVYARVFGNSQSLYTYRNSYNVVGSNNPRLRRQEMQVDKSLNRVSLFLFCCFILCLVLF 236

BLAST of Spo12339.1 vs. NCBI nr
Match: gi|225468785|ref|XP_002262822.1| (PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Vitis vinifera])

HSP 1 Score: 293.9 bits (751), Expect = 2.500e-76
Identity = 149/243 (61.32%), Postives = 175/243 (72.02%), Query Frame = 1

		  

Query: 1   MEVEKQFEQKLKSIPAAPKEAENLNGSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHV 60
           M +E+ F    +S+ AA  EAENLN SF+CNIC D A +PVVT CGHLYCWPC+YKWFHV
Sbjct: 1   MAIEQYFAHDWRSVSAAATEAENLNDSFECNICFDSARDPVVTLCGHLYCWPCVYKWFHV 60

Query: 61  QSASLPSDEYPQCPVCKTEISHTTVVPLYGRGQSLTNPEREAKSPSQGGSVPPRPTACGT 120
           QSASL SDE+PQCPVCK EISHTT+VPLYGRGQ+ +  E E K+   G ++PPRP ACGT
Sbjct: 61  QSASLASDEHPQCPVCKAEISHTTLVPLYGRGQTPSETELEGKTHCFGMAIPPRPPACGT 120

Query: 121 RALLNAASQPSHQLPPHRNPYQQPFVTGYVHPYDGSDVVSSSSSLNQNITQPS----VDG 180
           +AL+NA S    QL  +RNPYQ        HPY+  +  S SS  N   +  +      G
Sbjct: 121 QALINATSHNGQQL-QYRNPYQNQQYD--PHPYNDYEHDSPSSLFNMGGSTATSFFHPVG 180

Query: 181 MFGEMVYARVFGNSQSLYSYPNSYTAAGSSNPRVRRHEMQVHKSLNRVSIFLLCCFILCL 240
           MFGEMVYARVFGNS+SLY+YPNSY   GSS PR+RR EMQ  KSLNR+SIFL CCF+LCL
Sbjct: 181 MFGEMVYARVFGNSESLYAYPNSYHLTGSSTPRLRRQEMQADKSLNRISIFLFCCFLLCL 240

BLAST of Spo12339.1 vs. NCBI nr
Match: gi|329757897|gb|AEC04825.1| (ubiquitin ligase protein [Vitis pseudoreticulata])

HSP 1 Score: 291.6 bits (745), Expect = 1.300e-75
Identity = 148/243 (60.91%), Postives = 174/243 (71.60%), Query Frame = 1

		  

Query: 1   MEVEKQFEQKLKSIPAAPKEAENLNGSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHV 60
           M +E+ F    +S+ AA  EAENLN SF+CNIC D A +PVVT CGHLYCWPC+YKWFHV
Sbjct: 1   MAIEQYFAHDWRSVSAAATEAENLNDSFECNICFDSARDPVVTLCGHLYCWPCVYKWFHV 60

Query: 61  QSASLPSDEYPQCPVCKTEISHTTVVPLYGRGQSLTNPEREAKSPSQGGSVPPRPTACGT 120
           QSASL SDE+PQCPVCK EISHTT+VPLYGRGQ+ +  E E K+   G ++PPRP ACGT
Sbjct: 61  QSASLASDEHPQCPVCKAEISHTTLVPLYGRGQTPSETELEGKTHCFGMAIPPRPPACGT 120

Query: 121 RALLNAASQPSHQLPPHRNPYQQPFVTGYVHPYDGSDVVSSSSSLNQNITQPS----VDG 180
           +AL+NA S    QL  +RNPYQ        HPY+  +  S SS  N   +  +      G
Sbjct: 121 QALINATSHNGQQL-QYRNPYQNQQYD--PHPYNDYEHDSPSSLFNMGGSTATSFFHPVG 180

Query: 181 MFGEMVYARVFGNSQSLYSYPNSYTAAGSSNPRVRRHEMQVHKSLNRVSIFLLCCFILCL 240
           MFGEMVYARVFGNS+SLY+YPNSY   GSS PR+R  EMQ  KSLNR+SIFL CCF+LCL
Sbjct: 181 MFGEMVYARVFGNSESLYAYPNSYHLTGSSTPRLRTQEMQADKSLNRISIFLFCCFLLCL 240

BLAST of Spo12339.1 vs. NCBI nr
Match: gi|595863788|ref|XP_007211651.1| (hypothetical protein PRUPE_ppa008909mg [Prunus persica])

HSP 1 Score: 288.5 bits (737), Expect = 1.100e-74
Identity = 141/244 (57.79%), Postives = 174/244 (71.31%), Query Frame = 1

		  

Query: 1   MEVEKQFEQKLKSIPAAPKEAENLNGSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHV 60
           M +++ F  + KSIP    ++EN    FDCNICL+FA EPVVTFCGHLYCWPCIYKW HV
Sbjct: 72  MALQQYFAHECKSIPGTATDSENSKAGFDCNICLEFAHEPVVTFCGHLYCWPCIYKWLHV 131

Query: 61  QSASLPSDEYPQCPVCKTEISHTTVVPLYGRGQSLTNPEREAKSPSQGGSVPPRPTACGT 120
           QSASL SDE PQCPVCK +ISHTT+VPLYGRGQ+    E E K+P++G ++PPRP+AC T
Sbjct: 132 QSASLASDECPQCPVCKADISHTTMVPLYGRGQTSPETELEVKAPNRGMAIPPRPSACDT 191

Query: 121 RALLNAASQPSHQLPPHRNPYQQ-----PFVTGYVHPYDGSDVVSSSSSLNQNITQPSVD 180
           +AL++  S    QL P+RNPYQ      P   G    +  + +++  S+    I Q    
Sbjct: 192 QALISNTSPTGQQL-PYRNPYQNQQHSPPHPYGSFGEHSSAPLLNLGSTTMAGIHQHPAV 251

Query: 181 GMFGEMVYARVFGNSQSLYSYPNSYTAAGSSNPRVRRHEMQVHKSLNRVSIFLLCCFILC 240
           G+FGEMVYARVFGNS+SLY+YPNSY   GSS+PR+RR EMQ  KSLNR+SIFL CC +LC
Sbjct: 252 GVFGEMVYARVFGNSESLYAYPNSYHLTGSSSPRLRRQEMQADKSLNRISIFLFCCLLLC 311

BLAST of Spo12339.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QHU6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_182800 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 6.200e-138
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 1

		  

Query: 1   MEVEKQFEQKLKSIPAAPKEAENLNGSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHV 60
           MEVEKQFEQKLKSIPAAPKEAENLNGSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHV
Sbjct: 1   MEVEKQFEQKLKSIPAAPKEAENLNGSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHV 60

Query: 61  QSASLPSDEYPQCPVCKTEISHTTVVPLYGRGQSLTNPEREAKSPSQGGSVPPRPTACGT 120
           QSASLPSDEYPQCPVCKTEISHTTVVPLYGRGQSLTNPEREAKSPSQGGSVPPRPTACGT
Sbjct: 61  QSASLPSDEYPQCPVCKTEISHTTVVPLYGRGQSLTNPEREAKSPSQGGSVPPRPTACGT 120

Query: 121 RALLNAASQPSHQLPPHRNPYQQPFVTGYVHPYDGSDVVSSSSSLNQNITQPSVDGMFGE 180
           RALLNAASQPSHQLPPHRNPYQQPFVTGYVHPYDGSDVVSSSSSLNQNITQPSVDGMFGE
Sbjct: 121 RALLNAASQPSHQLPPHRNPYQQPFVTGYVHPYDGSDVVSSSSSLNQNITQPSVDGMFGE 180

Query: 181 MVYARVFGNSQSLYSYPNSYTAAGSSNPRVRRHEMQVHKSLNRVSIFLLCCFILCLAFF 240
           MVYARVFGNSQSLYSYPNSYTAAGSSNPRVRRHEMQVHKSLNRVSIFLLCCFILCLAFF
Sbjct: 181 MVYARVFGNSQSLYSYPNSYTAAGSSNPRVRRHEMQVHKSLNRVSIFLLCCFILCLAFF 239

BLAST of Spo12339.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BWE0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g183250 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 4.300e-99
Identity = 183/240 (76.25%), Postives = 199/240 (82.92%), Query Frame = 1

		  

Query: 1   MEVEKQFEQKLKSIPAAPKEAENLNGSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHV 60
           M VE+QF+QK  SI   PKEAE LNGSFDCNICLDFA+EPVVT CGHLYCWPCIYKWFHV
Sbjct: 1   MAVEQQFDQKWNSIADVPKEAEFLNGSFDCNICLDFANEPVVTLCGHLYCWPCIYKWFHV 60

Query: 61  QSASLPSDEYPQCPVCKTEISHTTVVPLYGRGQSLTNPEREAKSPSQGGSVPPRPTACGT 120
           QSASLPSDEYPQCPVCK +ISHTTVVPLYGRGQS TNPE E K+PS+G   PPRP ACGT
Sbjct: 61  QSASLPSDEYPQCPVCKADISHTTVVPLYGRGQSQTNPECETKAPSRGPGTPPRPPACGT 120

Query: 121 RALLNAASQPSHQLPPHRNPYQQPFVTGYVHPYDGS-DVVSSSSSLNQNITQPSVDGMFG 180
           RALLNAASQPS+QL P+RNPYQ P    YVH Y+GS +VVSS+SSLNQ        G+FG
Sbjct: 121 RALLNAASQPSNQLMPYRNPYQPP----YVHAYNGSEEVVSSTSSLNQTSDAVQSVGVFG 180

Query: 181 EMVYARVFGNSQSLYSYPNSYTAAGSSNPRVRRHEMQVHKSLNRVSIFLLCCFILCLAFF 240
           EMVYARVFGNSQSLY+Y NSY   GS+NPR+RR EMQV KSLNRVS+FL CCFILCL  F
Sbjct: 181 EMVYARVFGNSQSLYTYRNSYNVVGSNNPRLRRQEMQVDKSLNRVSLFLFCCFILCLVLF 236

BLAST of Spo12339.1 vs. UniProtKB/TrEMBL
Match: A5B310_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0916g00010 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.800e-76
Identity = 149/243 (61.32%), Postives = 175/243 (72.02%), Query Frame = 1

		  

Query: 1   MEVEKQFEQKLKSIPAAPKEAENLNGSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHV 60
           M +E+ F    +S+ AA  EAENLN SF+CNIC D A +PVVT CGHLYCWPC+YKWFHV
Sbjct: 1   MAIEQYFAHDWRSVSAAATEAENLNDSFECNICFDSARDPVVTLCGHLYCWPCVYKWFHV 60

Query: 61  QSASLPSDEYPQCPVCKTEISHTTVVPLYGRGQSLTNPEREAKSPSQGGSVPPRPTACGT 120
           QSASL SDE+PQCPVCK EISHTT+VPLYGRGQ+ +  E E K+   G ++PPRP ACGT
Sbjct: 61  QSASLASDEHPQCPVCKAEISHTTLVPLYGRGQTPSETELEGKTHCFGMAIPPRPPACGT 120

Query: 121 RALLNAASQPSHQLPPHRNPYQQPFVTGYVHPYDGSDVVSSSSSLNQNITQPS----VDG 180
           +AL+NA S    QL  +RNPYQ        HPY+  +  S SS  N   +  +      G
Sbjct: 121 QALINATSHNGQQL-QYRNPYQNQQYD--PHPYNDYEHDSPSSLFNMGGSTATSFFHPVG 180

Query: 181 MFGEMVYARVFGNSQSLYSYPNSYTAAGSSNPRVRRHEMQVHKSLNRVSIFLLCCFILCL 240
           MFGEMVYARVFGNS+SLY+YPNSY   GSS PR+RR EMQ  KSLNR+SIFL CCF+LCL
Sbjct: 181 MFGEMVYARVFGNSESLYAYPNSYHLTGSSTPRLRRQEMQADKSLNRISIFLFCCFLLCL 240

BLAST of Spo12339.1 vs. UniProtKB/TrEMBL
Match: F5CAE9_VITPS (Ubiquitin ligase protein OS=Vitis pseudoreticulata PE=2 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 8.800e-76
Identity = 148/243 (60.91%), Postives = 174/243 (71.60%), Query Frame = 1

		  

Query: 1   MEVEKQFEQKLKSIPAAPKEAENLNGSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHV 60
           M +E+ F    +S+ AA  EAENLN SF+CNIC D A +PVVT CGHLYCWPC+YKWFHV
Sbjct: 1   MAIEQYFAHDWRSVSAAATEAENLNDSFECNICFDSARDPVVTLCGHLYCWPCVYKWFHV 60

Query: 61  QSASLPSDEYPQCPVCKTEISHTTVVPLYGRGQSLTNPEREAKSPSQGGSVPPRPTACGT 120
           QSASL SDE+PQCPVCK EISHTT+VPLYGRGQ+ +  E E K+   G ++PPRP ACGT
Sbjct: 61  QSASLASDEHPQCPVCKAEISHTTLVPLYGRGQTPSETELEGKTHCFGMAIPPRPPACGT 120

Query: 121 RALLNAASQPSHQLPPHRNPYQQPFVTGYVHPYDGSDVVSSSSSLNQNITQPS----VDG 180
           +AL+NA S    QL  +RNPYQ        HPY+  +  S SS  N   +  +      G
Sbjct: 121 QALINATSHNGQQL-QYRNPYQNQQYD--PHPYNDYEHDSPSSLFNMGGSTATSFFHPVG 180

Query: 181 MFGEMVYARVFGNSQSLYSYPNSYTAAGSSNPRVRRHEMQVHKSLNRVSIFLLCCFILCL 240
           MFGEMVYARVFGNS+SLY+YPNSY   GSS PR+R  EMQ  KSLNR+SIFL CCF+LCL
Sbjct: 181 MFGEMVYARVFGNSESLYAYPNSYHLTGSSTPRLRTQEMQADKSLNRISIFLFCCFLLCL 240

BLAST of Spo12339.1 vs. UniProtKB/TrEMBL
Match: M5X1B5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008909mg PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 7.500e-75
Identity = 141/244 (57.79%), Postives = 174/244 (71.31%), Query Frame = 1

		  

Query: 1   MEVEKQFEQKLKSIPAAPKEAENLNGSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHV 60
           M +++ F  + KSIP    ++EN    FDCNICL+FA EPVVTFCGHLYCWPCIYKW HV
Sbjct: 72  MALQQYFAHECKSIPGTATDSENSKAGFDCNICLEFAHEPVVTFCGHLYCWPCIYKWLHV 131

Query: 61  QSASLPSDEYPQCPVCKTEISHTTVVPLYGRGQSLTNPEREAKSPSQGGSVPPRPTACGT 120
           QSASL SDE PQCPVCK +ISHTT+VPLYGRGQ+    E E K+P++G ++PPRP+AC T
Sbjct: 132 QSASLASDECPQCPVCKADISHTTMVPLYGRGQTSPETELEVKAPNRGMAIPPRPSACDT 191

Query: 121 RALLNAASQPSHQLPPHRNPYQQ-----PFVTGYVHPYDGSDVVSSSSSLNQNITQPSVD 180
           +AL++  S    QL P+RNPYQ      P   G    +  + +++  S+    I Q    
Sbjct: 192 QALISNTSPTGQQL-PYRNPYQNQQHSPPHPYGSFGEHSSAPLLNLGSTTMAGIHQHPAV 251

Query: 181 GMFGEMVYARVFGNSQSLYSYPNSYTAAGSSNPRVRRHEMQVHKSLNRVSIFLLCCFILC 240
           G+FGEMVYARVFGNS+SLY+YPNSY   GSS+PR+RR EMQ  KSLNR+SIFL CC +LC
Sbjct: 252 GVFGEMVYARVFGNSESLYAYPNSYHLTGSSSPRLRRQEMQADKSLNRISIFLFCCLLLC 311

BLAST of Spo12339.1 vs. ExPASy Swiss-Prot
Match: RMA1_CAPAN (E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum GN=RMA1H1 PE=1 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.700e-49
Identity = 111/227 (48.90%), Postives = 138/227 (60.79%), Query Frame = 1

		  

Query: 22  ENLNGSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHVQSASLPS--DEYPQCPVCKTE 81
           EN++G FDCNICLD   EPV+T CGHLYCWPCIYKW + QS S  +   + PQCPVCK E
Sbjct: 33  ENISGGFDCNICLDCVHEPVITLCGHLYCWPCIYKWIYFQSVSSENSDQQQPQCPVCKAE 92

Query: 82  ISHTTVVPLYGRGQSLTNPEREAKSPSQGGSVPPRPTA--CGTRALL-NAASQPSHQLPP 141
           +S  T++PLYGRG   T P  E K+P+ G  +P RP +  CG   LL    S PS  L  
Sbjct: 93  VSEKTLIPLYGRGGQSTKPS-EGKAPNLGIVIPQRPPSPRCGGHFLLPTTDSNPSQLL-- 152

Query: 142 HRNPYQQPFVT---GYVHPYDGSDVVSSSSSLNQNITQPSVDGMFGEMVYARVFGNSQ-S 201
            R  YQQ   T    Y   Y  S ++S   +   N+ Q S   M GE+ YAR+FGNS  +
Sbjct: 153 QRRGYQQQSQTRQPAYQGSYMSSPMLSPGGA-TANMLQHS---MIGEVAYARIFGNSSTT 212

Query: 202 LYSYPNSYTAAGSSNPRVRRHEMQVHKSLNRVSIFLLCCFILCLAFF 240
           +Y+YPNSY  A SS+PR+RR   Q  +SL R+  FL CCF+ CL  F
Sbjct: 213 MYTYPNSYNLAISSSPRMRRQLSQADRSLGRICFFLFCCFVTCLILF 252

BLAST of Spo12339.1 vs. ExPASy Swiss-Prot
Match: RMA1_ARATH (E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana GN=RMA1 PE=1 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.700e-41
Identity = 99/219 (45.21%), Postives = 128/219 (58.45%), Query Frame = 1

		  

Query: 25  NGSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHVQSASLPSDEYP---QCPVCKTEIS 84
           + +FDCNICLD   EPVVT CGHL+CWPCI+KW  VQS S  SDEY    QCPVCK+++S
Sbjct: 43  DSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFST-SDEYQRHRQCPVCKSKVS 102

Query: 85  HTTVVPLYGRGQSLTNPEREAKSPSQGGSVPPRPTACGTRALLNAASQPSHQLPPHRNPY 144
           H+T+VPLYGRG+  T  E +        SVP RP     R  +  +   S  L   +  +
Sbjct: 103 HSTLVPLYGRGRCTTQEEGK-------NSVPKRPVGPVYRLEMPNSPYASTDLRLSQRVH 162

Query: 145 QQPFVTGYVHPYDGSDVVSSSSSLNQNITQPSVDGMFGEMVYARVFGNS-QSLYSYPNSY 204
                 GY +P  G   V SS+SL+ +     V  M GEMV  R+FG      ++YP++Y
Sbjct: 163 FNSPQEGY-YPVSG---VMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTY 222

Query: 205 TAAGSSNPRVRRHEMQVHKSLNRVSIFLLCCFILCLAFF 240
             AG+S PR+RR  MQ  KSL R+  F +CC +LCL  F
Sbjct: 223 NLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

BLAST of Spo12339.1 vs. ExPASy Swiss-Prot
Match: RMA3_ARATH (E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana GN=RMA3 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.400e-36
Identity = 94/234 (40.17%), Postives = 129/234 (55.13%), Query Frame = 1

		  

Query: 13  SIPAAPKEAE-NLNGSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHVQSASLPSDEYP 72
           ++  AP   + N +G FDCNICLD A +PVVT CGHL+CWPCIYKW HVQ +S+  D++ 
Sbjct: 26  NLTTAPTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQ 85

Query: 73  -QCPVCKTEISHTTVVPLYGRGQSL-TNPEREAKSPSQGGSVPPRPTACGTRALLNAASQ 132
             CPVCK+ I+ T++VPLYGRG S  ++     K  +    +P RP     R  + +AS 
Sbjct: 86  NNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASS 145

Query: 133 PSHQLPPHRNPYQQPFVTGYVHPYDGSDVVSSSSSLNQNITQPS----VDGMFGEMVYAR 192
            +  L      +Q    + + H Y      ++ S+   N    S    V GMFG++VY R
Sbjct: 146 LNPSL-----QHQTLSPSFHNHQYSPRGFTTTESTDLANAVMMSFLYPVIGMFGDLVYTR 205

Query: 193 VFGNSQSLYSYPNSYTAAGSSNPRVRRHEMQVHKSLNRVSIFLLCCFILCLAFF 240
           +FG      ++ N+      + P   +  MQ  KSLNRVSIF LCC ILCL  F
Sbjct: 206 IFG------TFTNTI-----AQPYQSQRMMQREKSLNRVSIFFLCCIILCLLLF 243

BLAST of Spo12339.1 vs. ExPASy Swiss-Prot
Match: RMA2_ARATH (E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana GN=RMA2 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.000e-29
Identity = 84/221 (38.01%), Postives = 107/221 (48.42%), Query Frame = 1

		  

Query: 26  GSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHVQSASLPS-DEY------PQCPVCKT 85
           G FDCNICLD   +PVVT CGHL+CWPCI+KW +  + S    D+Y      P+CPVCK+
Sbjct: 17  GDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKS 76

Query: 86  EISHTTVVPLYGRGQSLTNPEREAKSPSQGGSVPPRPTACGTRALLNAASQPSHQLPPHR 145
           ++S  T+VP+YGRGQ         K+P  G +VP RPT  G    L    Q   +    R
Sbjct: 77  DVSEATLVPIYGRGQ---------KAPQSGSNVPSRPT--GPVYDLRGVGQRLGEGESQR 136

Query: 146 NPYQQPFVTGYVHPYDGSDVVSSSSSLNQNITQPSVDGMFGEMVYARVFGNSQSLYSYPN 205
             Y+ P                             V G+  EMVY R+FG S S      
Sbjct: 137 YMYRMP---------------------------DPVMGVVCEMVYRRLFGESSS------ 193

Query: 206 SYTAAGSSNPRVRRHEMQVHKSLNRVSIFLLCCFILCLAFF 240
           +       N R RR  MQ  +SL+RV +FLLC   +CL  F
Sbjct: 197 NMAPYRDMNVRSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

BLAST of Spo12339.1 vs. ExPASy Swiss-Prot
Match: RN185_CHICK (E3 ubiquitin-protein ligase RNF185 OS=Gallus gallus GN=RNF185 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.000e-16
Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 1

		  

Query: 23  NLNGSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHVQSASLPSDEYPQCPVCKTEISH 82
           N + +F+CNICLD A + V++ CGHL+CWPC+++W   +    P+ +   CPVCK  IS 
Sbjct: 34  NQDNTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETR----PNRQV--CPVCKAGISR 93

Query: 83  TTVVPLYGRGQSLTNPEREAKSPSQGGSVP 113
             V+PLYGRG +     RE   P   G  P
Sbjct: 94  DKVIPLYGRGSTGQQDPREKTPPRPQGQRP 117

BLAST of Spo12339.1 vs. TAIR (Arabidopsis)
Match: AT4G03510.1 (RING membrane-anchor 1)

HSP 1 Score: 170.2 bits (430), Expect = 1.500e-42
Identity = 99/219 (45.21%), Postives = 128/219 (58.45%), Query Frame = 1

		  

Query: 25  NGSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHVQSASLPSDEYP---QCPVCKTEIS 84
           + +FDCNICLD   EPVVT CGHL+CWPCI+KW  VQS S  SDEY    QCPVCK+++S
Sbjct: 43  DSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFST-SDEYQRHRQCPVCKSKVS 102

Query: 85  HTTVVPLYGRGQSLTNPEREAKSPSQGGSVPPRPTACGTRALLNAASQPSHQLPPHRNPY 144
           H+T+VPLYGRG+  T  E +        SVP RP     R  +  +   S  L   +  +
Sbjct: 103 HSTLVPLYGRGRCTTQEEGK-------NSVPKRPVGPVYRLEMPNSPYASTDLRLSQRVH 162

Query: 145 QQPFVTGYVHPYDGSDVVSSSSSLNQNITQPSVDGMFGEMVYARVFGNS-QSLYSYPNSY 204
                 GY +P  G   V SS+SL+ +     V  M GEMV  R+FG      ++YP++Y
Sbjct: 163 FNSPQEGY-YPVSG---VMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTY 222

Query: 205 TAAGSSNPRVRRHEMQVHKSLNRVSIFLLCCFILCLAFF 240
             AG+S PR+RR  MQ  KSL R+  F +CC +LCL  F
Sbjct: 223 NLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

BLAST of Spo12339.1 vs. TAIR (Arabidopsis)
Match: AT4G27470.1 (RING membrane-anchor 3)

HSP 1 Score: 153.3 bits (386), Expect = 1.900e-37
Identity = 94/234 (40.17%), Postives = 129/234 (55.13%), Query Frame = 1

		  

Query: 13  SIPAAPKEAE-NLNGSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHVQSASLPSDEYP 72
           ++  AP   + N +G FDCNICLD A +PVVT CGHL+CWPCIYKW HVQ +S+  D++ 
Sbjct: 26  NLTTAPTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQ 85

Query: 73  -QCPVCKTEISHTTVVPLYGRGQSL-TNPEREAKSPSQGGSVPPRPTACGTRALLNAASQ 132
             CPVCK+ I+ T++VPLYGRG S  ++     K  +    +P RP     R  + +AS 
Sbjct: 86  NNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASS 145

Query: 133 PSHQLPPHRNPYQQPFVTGYVHPYDGSDVVSSSSSLNQNITQPS----VDGMFGEMVYAR 192
            +  L      +Q    + + H Y      ++ S+   N    S    V GMFG++VY R
Sbjct: 146 LNPSL-----QHQTLSPSFHNHQYSPRGFTTTESTDLANAVMMSFLYPVIGMFGDLVYTR 205

Query: 193 VFGNSQSLYSYPNSYTAAGSSNPRVRRHEMQVHKSLNRVSIFLLCCFILCLAFF 240
           +FG      ++ N+      + P   +  MQ  KSLNRVSIF LCC ILCL  F
Sbjct: 206 IFG------TFTNTI-----AQPYQSQRMMQREKSLNRVSIFFLCCIILCLLLF 243

BLAST of Spo12339.1 vs. TAIR (Arabidopsis)
Match: AT4G28270.1 (RING membrane-anchor 2)

HSP 1 Score: 130.2 bits (326), Expect = 1.700e-30
Identity = 84/221 (38.01%), Postives = 107/221 (48.42%), Query Frame = 1

		  

Query: 26  GSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHVQSASLPS-DEY------PQCPVCKT 85
           G FDCNICLD   +PVVT CGHL+CWPCI+KW +  + S    D+Y      P+CPVCK+
Sbjct: 17  GDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKS 76

Query: 86  EISHTTVVPLYGRGQSLTNPEREAKSPSQGGSVPPRPTACGTRALLNAASQPSHQLPPHR 145
           ++S  T+VP+YGRGQ         K+P  G +VP RPT  G    L    Q   +    R
Sbjct: 77  DVSEATLVPIYGRGQ---------KAPQSGSNVPSRPT--GPVYDLRGVGQRLGEGESQR 136

Query: 146 NPYQQPFVTGYVHPYDGSDVVSSSSSLNQNITQPSVDGMFGEMVYARVFGNSQSLYSYPN 205
             Y+ P                             V G+  EMVY R+FG S S      
Sbjct: 137 YMYRMP---------------------------DPVMGVVCEMVYRRLFGESSS------ 193

Query: 206 SYTAAGSSNPRVRRHEMQVHKSLNRVSIFLLCCFILCLAFF 240
           +       N R RR  MQ  +SL+RV +FLLC   +CL  F
Sbjct: 197 NMAPYRDMNVRSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

BLAST of Spo12339.1 vs. TAIR (Arabidopsis)
Match: AT1G74990.1 (RING/U-box superfamily protein)

HSP 1 Score: 104.8 bits (260), Expect = 7.700e-23
Identity = 50/120 (41.67%), Postives = 66/120 (55.00%), Query Frame = 1

		  

Query: 13  SIPAAPKEAENLNGSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHVQSASLPSDEYPQ 72
           +I     E ++ + +F CNICL+ A EP+VT CGHL+CWPC+YKW H  S S        
Sbjct: 2   AINTITNEEDDASNNFGCNICLELAREPIVTLCGHLFCWPCLYKWLHYHSKS------NH 61

Query: 73  CPVCKTEISHTTVVPLYGRGQSLTNPEREAKSPSQGGSVPPRPTACGTRALLNAASQPSH 132
           CPVCK  +   T+VPLYG G+  ++P  +  S   G +VP RP A  T        Q  H
Sbjct: 62  CPVCKALVKEDTLVPLYGMGKPSSDPRSKLNS---GVTVPNRPAATRTETARPRLEQRHH 112

BLAST of Spo12339.1 vs. TAIR (Arabidopsis)
Match: AT1G19310.1 (RING/U-box superfamily protein)

HSP 1 Score: 102.1 bits (253), Expect = 5.000e-22
Identity = 69/216 (31.94%), Postives = 104/216 (48.15%), Query Frame = 1

		  

Query: 23  NLNGSFDCNICLDFADEPVVTFCGHLYCWPCIYKWFHVQSASLPSDEYPQCPVCKTEISH 82
           N + +F+CNICLD A +P+VT CGHL+CWPC+YKW H+ S S        CPVCK  I  
Sbjct: 16  NDSSNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQS------KDCPVCKAVIEE 75

Query: 83  TTVVPLYGRGQSLTNPEREAKSPSQGGSVPPRPTACGTRALLNAASQPSHQLPPHRNPYQ 142
             +VPLYGRG+S  +P  ++     G  VP RP+  G R        P+H    H     
Sbjct: 76  DRLVPLYGRGKSSADPRSKS---IPGLEVPNRPS--GQRPETAQPPDPNHGFAHHHG--F 135

Query: 143 QPFVTGYVHPYDGSDVVSSSSSLNQNITQPSVDGM-FGEMVYARVFGNSQS---LYSYPN 202
             F+ G+  P   +   + + S       PS+  + F     A ++G + S    + + N
Sbjct: 136 GGFMGGFAAPMASARFGNVTLSAAFGGLIPSLFNLHFHGFPDAAMYGAAASGGFPHGFSN 195

Query: 203 SYTAAGSSNPRVRRHEMQVHKSLNRVSIFLLCCFIL 235
            +    S     +RH  +  +  + + I LL  F++
Sbjct: 196 PFHGGHSHMHSYQRHTGRQGQQDHHLRILLLIVFVV 218

The following BLAST results are available for this feature:
BLAST of Spo12339.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902158755|gb|KNA06253.1|8.9e-138100.hypothetical protein SOVF_1828... [more]
gi|731350435|ref|XP_010686501.1|6.2e-9976.2PREDICTED: E3 ubiquitin-protei... [more]
gi|225468785|ref|XP_002262822.1|2.5e-7661.3PREDICTED: E3 ubiquitin-protei... [more]
gi|329757897|gb|AEC04825.1|1.3e-7560.9ubiquitin ligase protein [Viti... [more]
gi|595863788|ref|XP_007211651.1|1.1e-7457.7hypothetical protein PRUPE_ppa... [more]
back to top
BLAST of Spo12339.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QHU6_SPIOL6.2e-138100.Uncharacterized protein OS=Spi... [more]
A0A0J8BWE0_BETVU4.3e-9976.2Uncharacterized protein OS=Bet... [more]
A5B310_VITVI1.8e-7661.3Putative uncharacterized prote... [more]
F5CAE9_VITPS8.8e-7660.9Ubiquitin ligase protein OS=Vi... [more]
M5X1B5_PRUPE7.5e-7557.7Uncharacterized protein OS=Pru... [more]
back to top
BLAST of Spo12339.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RMA1_CAPAN2.7e-4948.9E3 ubiquitin-protein ligase RM... [more]
RMA1_ARATH2.7e-4145.2E3 ubiquitin-protein ligase RM... [more]
RMA3_ARATH3.4e-3640.1E3 ubiquitin-protein ligase RM... [more]
RMA2_ARATH3.0e-2938.0E3 ubiquitin-protein ligase RM... [more]
RN185_CHICK1.0e-1643.3E3 ubiquitin-protein ligase RN... [more]
back to top
BLAST of Spo12339.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G03510.11.5e-4245.2RING membrane-anchor 1[more]
AT4G27470.11.9e-3740.1RING membrane-anchor 3[more]
AT4G28270.11.7e-3038.0RING membrane-anchor 2[more]
AT1G74990.17.7e-2341.6RING/U-box superfamily protein[more]
AT1G19310.15.0e-2231.9RING/U-box superfamily protein[more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 30..76
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 30..77
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 18..89
score: 4.3
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 45..54
scor
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 30..76
score: 1.
NoneNo IPR availablePANTHERPTHR12313RNF5coord: 1..239
score: 3.0E
NoneNo IPR availablePANTHERPTHR12313:SF6SUBFAMILY NOT NAMEDcoord: 1..239
score: 3.0E
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 11..83
score: 7.28

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005982 starch metabolic process
biological_process GO:0006857 oligopeptide transport
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006508 proteolysis
biological_process GO:0009225 nucleotide-sugar metabolic process
biological_process GO:0016310 phosphorylation
biological_process GO:0009741 response to brassinosteroid
biological_process GO:0008152 metabolic process
biological_process GO:0002213 defense response to insect
biological_process GO:0050832 defense response to fungus
biological_process GO:0005992 trehalose biosynthetic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0007165 signal transduction
cellular_component GO:0032580 Golgi cisterna membrane
cellular_component GO:0005768 endosome
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0005834 heterotrimeric G-protein complex
cellular_component GO:0005739 mitochondrion
molecular_function GO:0050379 UDP-glucuronate 5'-epimerase activity
molecular_function GO:0050662 coenzyme binding
molecular_function GO:0050378 UDP-glucuronate 4-epimerase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0097159 organic cyclic compound binding
molecular_function GO:1901363 heterocyclic compound binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004190 aspartic-type endopeptidase activity
RNA-Seq Expression