Spo12282 (gene)

Overview
NameSpo12282
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionBnaA08g28570D protein
LocationSpoScf_00903 : 200375 .. 201426 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGTACGGTTTCCAATAAAAGAGAGTACAGTAGCAGCACTGCACTACTGCAGCAGTCTCTATTGCAAAGTTGCAATACAAAAGAAAGAAAGAGAACCCAGAAGAAATGGGGAAAATGCACCAAACTCTGTATATTGACGACTACCAGCGCTACCTCAAAGATCCTCACGCTGCTCGTTTAAAGGCTGGCCAACTCAATCAGGTCTCTCTCTAGTCTCTCCTCAATCTCCACTTGCCAATTTCTGACTACTCCTTAATTTCATTTCTAACAGTTTTTGTTTCATTTTGTTCAAATAGATTATCCATATACACGGATTCATGTACGCTGACAAAAACCGTGACAAGATTCTGGAAACGTTGGATGAAATGGACAACAACTCAATGATGAACCCTCTTCGTTCTACATTAACCGAGACATTATCGTCTCACAATGATTTCCCTCTTTCAATGGATGAGGTGAATACAGACCTTGATATTCTTCAATGGCGAGACGACGTCGTCTCGGTCCATTCCCTCCAATTTCTCTCCTTCTCCAATGCTGAAACTACCCAGTCCCACCATATCAGTTCTGAGAAGAAGAAGAAGAGGGTCAGGAAGCCGAAGCTGAAGCAAAAGCCGAAGGAGGTGTTTAACCCGGTTTATTTGACAAAACCCAGATCAAAGAAGAAAGCACAGAAGAGGAAGAGTCTTGCTGATATTGGTAATAGGGGATTCATGGGGTGTTCATCAGTTCTGCTATTAGGGAATTGATTTAGGGGGTTTTGTTTTTATGGCATGAGTTTGTAATGAAGATTGTGCCTGCAAGATGTTTGTGAATATGTCTAAACGAAAAAAGATGAAGACGACTACTACTAAAACGACAGGTTGATTTCTTAATTTTGTTTATTCTGTTTTTACTGCCTGTTGATGCTTTTATTACATTGGAATTGGTGATTTGTGGCTGTGAAAATCAATTTGATGAAGAACGAGGATTAATTCCTTAAAATCATGTCAACATTTTCATTGACTCACTCCCAAGTCCCAACCGCAAATTGGATTATATACCCGGGTGCA

mRNA sequence

GAGTACGGTTTCCAATAAAAGAGAGTACAGTAGCAGCACTGCACTACTGCAGCAGTCTCTATTGCAAAGTTGCAATACAAAAGAAAGAAAGAGAACCCAGAAGAAATGGGGAAAATGCACCAAACTCTGTATATTGACGACTACCAGCGCTACCTCAAAGATCCTCACGCTGCTCGTTTAAAGGCTGGCCAACTCAATCAGATTATCCATATACACGGATTCATGTACGCTGACAAAAACCGTGACAAGATTCTGGAAACGTTGGATGAAATGGACAACAACTCAATGATGAACCCTCTTCGTTCTACATTAACCGAGACATTATCGTCTCACAATGATTTCCCTCTTTCAATGGATGAGGTGAATACAGACCTTGATATTCTTCAATGGCGAGACGACGTCGTCTCGGTCCATTCCCTCCAATTTCTCTCCTTCTCCAATGCTGAAACTACCCAGTCCCACCATATCAGTTCTGAGAAGAAGAAGAAGAGGGTCAGGAAGCCGAAGCTGAAGCAAAAGCCGAAGGAGGTGTTTAACCCGGTTTATTTGACAAAACCCAGATCAAAGAAGAAAGCACAGAAGAGGAAGAGTCTTGCTGATATTGGTAATAGGGGATTCATGGGGTGTTCATCAGTTCTGCTATTAGGGAATTGATTTAGGGGGTTTTGTTTTTATGGCATGAGTTTGTAATGAAGATTGTGCCTGCAAGATGTTTGTGAATATGTCTAAACGAAAAAAGATGAAGACGACTACTACTAAAACGACAGGTTGATTTCTTAATTTTGTTTATTCTGTTTTTACTGCCTGTTGATGCTTTTATTACATTGGAATTGGTGATTTGTGGCTGTGAAAATCAATTTGATGAAGAACGAGGATTAATTCCTTAAAATCATGTCAACATTTTCATTGACTCACTCCCAAGTCCCAACCGCAAATTGGATTATATACCCGGGTGCA

Coding sequence (CDS)

ATGGGGAAAATGCACCAAACTCTGTATATTGACGACTACCAGCGCTACCTCAAAGATCCTCACGCTGCTCGTTTAAAGGCTGGCCAACTCAATCAGATTATCCATATACACGGATTCATGTACGCTGACAAAAACCGTGACAAGATTCTGGAAACGTTGGATGAAATGGACAACAACTCAATGATGAACCCTCTTCGTTCTACATTAACCGAGACATTATCGTCTCACAATGATTTCCCTCTTTCAATGGATGAGGTGAATACAGACCTTGATATTCTTCAATGGCGAGACGACGTCGTCTCGGTCCATTCCCTCCAATTTCTCTCCTTCTCCAATGCTGAAACTACCCAGTCCCACCATATCAGTTCTGAGAAGAAGAAGAAGAGGGTCAGGAAGCCGAAGCTGAAGCAAAAGCCGAAGGAGGTGTTTAACCCGGTTTATTTGACAAAACCCAGATCAAAGAAGAAAGCACAGAAGAGGAAGAGTCTTGCTGATATTGGTAATAGGGGATTCATGGGGTGTTCATCAGTTCTGCTATTAGGGAATTGA

Protein sequence

MGKMHQTLYIDDYQRYLKDPHAARLKAGQLNQIIHIHGFMYADKNRDKILETLDEMDNNSMMNPLRSTLTETLSSHNDFPLSMDEVNTDLDILQWRDDVVSVHSLQFLSFSNAETTQSHHISSEKKKKRVRKPKLKQKPKEVFNPVYLTKPRSKKKAQKRKSLADIGNRGFMGCSSVLLLGN
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo12282.1Spo12282.1mRNA


Homology
[Close]
BLAST of Spo12282.1 vs. NCBI nr
Match: gi|902189111|gb|KNA11283.1| (hypothetical protein SOVF_136560 [Spinacia oleracea])

HSP 1 Score: 358.6 bits (919), Expect = 6.400e-96
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1 

		  

Query: 1   MGKMHQTLYIDDYQRYLKDPHAARLKAGQLNQIIHIHGFMYADKNRDKILETLDEMDNNS 60
           MGKMHQTLYIDDYQRYLKDPHAARLKAGQLNQIIHIHGFMYADKNRDKILETLDEMDNNS
Sbjct: 1   MGKMHQTLYIDDYQRYLKDPHAARLKAGQLNQIIHIHGFMYADKNRDKILETLDEMDNNS 60

Query: 61  MMNPLRSTLTETLSSHNDFPLSMDEVNTDLDILQWRDDVVSVHSLQFLSFSNAETTQSHH 120
           MMNPLRSTLTETLSSHNDFPLSMDEVNTDLDILQWRDDVVSVHSLQFLSFSNAETTQSHH
Sbjct: 61  MMNPLRSTLTETLSSHNDFPLSMDEVNTDLDILQWRDDVVSVHSLQFLSFSNAETTQSHH 120

Query: 121 ISSEKKKKRVRKPKLKQKPKEVFNPVYLTKPRSKKKAQKRKSLADIGNRGFMGCSSVLLL 180
           ISSEKKKKRVRKPKLKQKPKEVFNPVYLTKPRSKKKAQKRKSLADIGNRGFMGCSSVLLL
Sbjct: 121 ISSEKKKKRVRKPKLKQKPKEVFNPVYLTKPRSKKKAQKRKSLADIGNRGFMGCSSVLLL 180

Query: 181 GN 183
           GN
Sbjct: 181 GN 182
[Close]
BLAST of Spo12282.1 vs. NCBI nr
Match: gi|731322114|ref|XP_010671714.1| (PREDICTED: uncharacterized protein LOC104888440 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 116.3 bits (290), Expect = 5.500e-23
Identity = 78/165 (47.27%), Postives = 106/165 (64.24%), Query Frame = 1 

		  

Query: 8   LYIDDYQRYLKDPHAARLKAGQLNQIIHIHGFM-YADKNRDK--ILETLDEMDNNSMMNP 67
           L ++DY  Y++DP    L   +LNQIIH+HGF  +  +N  K  +L+ L E+++   MNP
Sbjct: 19  LQLEDYDIYVEDPKTTNLTTDKLNQIIHMHGFFKFRRENLRKRNVLDALSEIED--FMNP 78

Query: 68  LRSTLTETLSSHNDFPLSMDEVNTDLDILQWRDDVVSVHSLQFLSFS-NAETTQSHHISS 127
            RSTL E LS +N  PL++D+VN DLD LQWRD    + S+Q LSF  N +  + +    
Sbjct: 79  QRSTLNENLSIYNR-PLTVDQVNDDLDTLQWRD--FPIESVQSLSFDRNVDENEGNFELQ 138

Query: 128 EK--KKKRVRKPKLKQKPKEVFNPVYLTKPRSKKKAQKRKSLADI 167
           E   KKKR RK K++    EVF+PV+LTKPRSKK  QK+K L+DI
Sbjct: 139 EMCVKKKRGRKKKVR----EVFDPVHLTKPRSKKNIQKKKKLSDI 174
[Close]
BLAST of Spo12282.1 vs. NCBI nr
Match: gi|870865191|gb|KMT16258.1| (hypothetical protein BVRB_3g054120 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 116.3 bits (290), Expect = 5.500e-23
Identity = 78/165 (47.27%), Postives = 106/165 (64.24%), Query Frame = 1 

		  

Query: 8   LYIDDYQRYLKDPHAARLKAGQLNQIIHIHGFM-YADKNRDK--ILETLDEMDNNSMMNP 67
           L ++DY  Y++DP    L   +LNQIIH+HGF  +  +N  K  +L+ L E+++   MNP
Sbjct: 10  LQLEDYDIYVEDPKTTNLTTDKLNQIIHMHGFFKFRRENLRKRNVLDALSEIED--FMNP 69

Query: 68  LRSTLTETLSSHNDFPLSMDEVNTDLDILQWRDDVVSVHSLQFLSFS-NAETTQSHHISS 127
            RSTL E LS +N  PL++D+VN DLD LQWRD    + S+Q LSF  N +  + +    
Sbjct: 70  QRSTLNENLSIYNR-PLTVDQVNDDLDTLQWRD--FPIESVQSLSFDRNVDENEGNFELQ 129

Query: 128 EK--KKKRVRKPKLKQKPKEVFNPVYLTKPRSKKKAQKRKSLADI 167
           E   KKKR RK K++    EVF+PV+LTKPRSKK  QK+K L+DI
Sbjct: 130 EMCVKKKRGRKKKVR----EVFDPVHLTKPRSKKNIQKKKKLSDI 165
[Close]
BLAST of Spo12282.1 vs. NCBI nr
Match: gi|902190063|gb|KNA11534.1| (hypothetical protein SOVF_134260 [Spinacia oleracea])

HSP 1 Score: 75.1 bits (183), Expect = 1.400e-10
Identity = 60/157 (38.22%), Postives = 87/157 (55.41%), Query Frame = 1 

		  

Query: 6   QTLYIDDYQRYLKDP-HAARLKAGQLNQIIHIHGFMYA---DKNRDKILETLDEMDNNSM 65
           +TL  +DY  ++K    ++ L   + NQII IHGF      ++ +D +LE L  +D    
Sbjct: 5   KTLRFEDYDFFVKSSVMSSELNFDKCNQIIEIHGFTKLRRLNRRKDLVLEALSAIDE--F 64

Query: 66  MNPLRSTLTET-LSSHNDFPLSMDEVNTDLDILQWRDDVVSVHSLQFLSFSNAETTQSHH 125
           MNP RSTL ET +S+++D  LSMDEV+ DLD LQWRD            F + E   +  
Sbjct: 65  MNPNRSTLNETQISANSDDCLSMDEVSADLDALQWRD------------FIDDEDNDNGS 124

Query: 126 ISSEKKKKRVRKPKLKQKPKEVFNPVYLTKPRSKKKA 158
            + EK   R  +   + K ++VF+PV+LTKP +  KA
Sbjct: 125 ANMEKVYPRRGR---RVKRRKVFDPVHLTKPSTMSKA 144
[Close]
BLAST of Spo12282.1 vs. NCBI nr
Match: gi|720038353|ref|XP_010267960.1| (PREDICTED: uncharacterized protein LOC104605054 [Nelumbo nucifera])

HSP 1 Score: 63.2 bits (152), Expect = 5.600e-7
Identity = 38/123 (30.89%), Postives = 72/123 (58.54%), Query Frame = 1 

		  

Query: 3   KMHQTLYIDDYQRYLKDPHAARLKAGQLNQIIHIHGFMYADKNRDKILETLDEMDNNSMM 62
           K  +++ ++DY+ +L++PH   L   QLNQIIH+HGF    +   +  + +D +    ++
Sbjct: 2   KEKRSINLEDYESFLENPHHHDLTIKQLNQIIHMHGFNKLHRRPKR--DLMDALSTIDLL 61

Query: 63  NPLRSTLTETLSSHNDFPLSMDEVNTDLDILQWRD-DVVSVHSLQFLSFSNAETTQSHHI 122
            PLRSTL  ++SS     L+ +++N DL  L+W++  V S+ +++ L+    +  Q +H+
Sbjct: 62  VPLRSTLYGSISSFAS--LTPEQLNEDLKDLEWQECPVQSIETVKKLTEQKQQQQQHNHL 120

Query: 123 SSE 125
             E
Sbjct: 122 HQE 120
[Close]
BLAST of Spo12282.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QX61_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_136560 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 4.500e-96
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1 

		  

Query: 1   MGKMHQTLYIDDYQRYLKDPHAARLKAGQLNQIIHIHGFMYADKNRDKILETLDEMDNNS 60
           MGKMHQTLYIDDYQRYLKDPHAARLKAGQLNQIIHIHGFMYADKNRDKILETLDEMDNNS
Sbjct: 1   MGKMHQTLYIDDYQRYLKDPHAARLKAGQLNQIIHIHGFMYADKNRDKILETLDEMDNNS 60

Query: 61  MMNPLRSTLTETLSSHNDFPLSMDEVNTDLDILQWRDDVVSVHSLQFLSFSNAETTQSHH 120
           MMNPLRSTLTETLSSHNDFPLSMDEVNTDLDILQWRDDVVSVHSLQFLSFSNAETTQSHH
Sbjct: 61  MMNPLRSTLTETLSSHNDFPLSMDEVNTDLDILQWRDDVVSVHSLQFLSFSNAETTQSHH 120

Query: 121 ISSEKKKKRVRKPKLKQKPKEVFNPVYLTKPRSKKKAQKRKSLADIGNRGFMGCSSVLLL 180
           ISSEKKKKRVRKPKLKQKPKEVFNPVYLTKPRSKKKAQKRKSLADIGNRGFMGCSSVLLL
Sbjct: 121 ISSEKKKKRVRKPKLKQKPKEVFNPVYLTKPRSKKKAQKRKSLADIGNRGFMGCSSVLLL 180

Query: 181 GN 183
           GN
Sbjct: 181 GN 182
[Close]
BLAST of Spo12282.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CWC1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g054120 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.900e-23
Identity = 78/165 (47.27%), Postives = 106/165 (64.24%), Query Frame = 1 

		  

Query: 8   LYIDDYQRYLKDPHAARLKAGQLNQIIHIHGFM-YADKNRDK--ILETLDEMDNNSMMNP 67
           L ++DY  Y++DP    L   +LNQIIH+HGF  +  +N  K  +L+ L E+++   MNP
Sbjct: 10  LQLEDYDIYVEDPKTTNLTTDKLNQIIHMHGFFKFRRENLRKRNVLDALSEIED--FMNP 69

Query: 68  LRSTLTETLSSHNDFPLSMDEVNTDLDILQWRDDVVSVHSLQFLSFS-NAETTQSHHISS 127
            RSTL E LS +N  PL++D+VN DLD LQWRD    + S+Q LSF  N +  + +    
Sbjct: 70  QRSTLNENLSIYNR-PLTVDQVNDDLDTLQWRD--FPIESVQSLSFDRNVDENEGNFELQ 129

Query: 128 EK--KKKRVRKPKLKQKPKEVFNPVYLTKPRSKKKAQKRKSLADI 167
           E   KKKR RK K++    EVF+PV+LTKPRSKK  QK+K L+DI
Sbjct: 130 EMCVKKKRGRKKKVR----EVFDPVHLTKPRSKKNIQKKKKLSDI 165
[Close]
BLAST of Spo12282.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QW92_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_134260 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.900e-11
Identity = 60/157 (38.22%), Postives = 87/157 (55.41%), Query Frame = 1 

		  

Query: 6   QTLYIDDYQRYLKDP-HAARLKAGQLNQIIHIHGFMYA---DKNRDKILETLDEMDNNSM 65
           +TL  +DY  ++K    ++ L   + NQII IHGF      ++ +D +LE L  +D    
Sbjct: 5   KTLRFEDYDFFVKSSVMSSELNFDKCNQIIEIHGFTKLRRLNRRKDLVLEALSAIDE--F 64

Query: 66  MNPLRSTLTET-LSSHNDFPLSMDEVNTDLDILQWRDDVVSVHSLQFLSFSNAETTQSHH 125
           MNP RSTL ET +S+++D  LSMDEV+ DLD LQWRD            F + E   +  
Sbjct: 65  MNPNRSTLNETQISANSDDCLSMDEVSADLDALQWRD------------FIDDEDNDNGS 124

Query: 126 ISSEKKKKRVRKPKLKQKPKEVFNPVYLTKPRSKKKA 158
            + EK   R  +   + K ++VF+PV+LTKP +  KA
Sbjct: 125 ANMEKVYPRRGR---RVKRRKVFDPVHLTKPSTMSKA 144
[Close]
BLAST of Spo12282.1 vs. UniProtKB/TrEMBL
Match: A0A061EPF1_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_021360 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.100e-7
Identity = 37/98 (37.76%), Postives = 58/98 (59.18%), Query Frame = 1 

		  

Query: 10  IDDYQRYLKDPHAARLKAGQLNQIIHIHGFMYADKNRDKIL-ETLDEMDNNSMMNPLRST 69
           ++DY+ +L +P+       QLN+II++HGF    K R   L E L  +D   ++ P RST
Sbjct: 90  LEDYEHFLGNPYDDAFSYQQLNKIIYMHGFKKIHKRRKADLYEALSTID---LIKPQRST 149

Query: 70  LTETLSSHNDFPLSMDEVNTDLDILQWRD-DVVSVHSL 106
           L +    ++D  LS+D+V  DL  LQW++  V S+HS+
Sbjct: 150 LKDDYPPYDDSALSLDQVKQDLQTLQWQECPVQSIHSI 184
[Close]
BLAST of Spo12282.1 vs. UniProtKB/TrEMBL
Match: D7SYL6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01030 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.100e-7
Identity = 48/132 (36.36%), Postives = 75/132 (56.82%), Query Frame = 1 

		  

Query: 8   LYIDDYQRYLKDPHAARLKAGQLNQIIHIHGFMYADKNR-DKILETLDEMDNNSMMNPLR 67
           + + DY+ +L++P+        LNQII +HGF+   K R +++LE L  +D   +M+P R
Sbjct: 9   IQLHDYEVFLENPYRLDCTNDHLNQIIQMHGFIKLHKRRKEELLEALSTID---LMHPPR 68

Query: 68  STLTETLSSHNDFPLSMDEVNTDLDILQWRDDVVSVHSLQFLSFSNAETTQSHHISSEKK 127
           STL E  SS  D  L++DEVN DL+ L+W++    V SLQ L  S      + +  S   
Sbjct: 69  STLNEG-SSPYDSSLTIDEVNKDLEALEWQE--CPVQSLQTLGPSIPTIDAAGNDVSPAF 128

Query: 128 KKRVRKPKLKQK 139
           K   +KP+ K++
Sbjct: 129 KITAKKPRTKRR 134
[Close]
BLAST of Spo12282.1 vs. TAIR (Arabidopsis)
Match: AT1G06320.1 (unknown protein)

HSP 1 Score: 51.6 bits (122), Expect = 5.900e-7
Identity = 48/166 (28.92%), Postives = 86/166 (51.81%), Query Frame = 1 

		  

Query: 10  IDDYQRYLKDPHAARLKAGQLNQIIHIHGFMYADKNRDKILETLDEMDNNSMMNPLRSTL 69
           +++Y  +    ++       LNQI+H+HGF    K + KI+E  + +D+  +++  RSTL
Sbjct: 11  VEEYVEFCNSGNSIHFTIAYLNQILHLHGFRKLHKLQKKIVE--EAVDSLDLLDLSRSTL 70

Query: 70  TE-TLSSHNDFPLSMDEVNTDLDILQWRDDVVSVHSLQFLSFSNAETTQSHHISSEKKKK 129
            + T SS +   L++DEV +D++ L+W++   +  SLQ +   N++ T    IS  K+K 
Sbjct: 71  KQVTDSSPSSSSLTLDEVISDIEALKWQECCFT--SLQII---NSQETTPSEISKPKQKS 130

Query: 130 RVRKPKLKQKP------KEVFNPVYLTKP----RSKKKAQKRKSLA 165
             RK    +K        E  N + +  P    R+KK  +  KS++
Sbjct: 131 NKRKKATMKKSLNTNFGDENDNTMMMMLPTKKMRNKKTTKNLKSIS 169
The following BLAST results are available for this feature:
BLAST of Spo12282.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902189111|gb|KNA11283.1|6.4e-96100.hypothetical protein SOVF_1365... [more]
gi|731322114|ref|XP_010671714.1|5.5e-2347.2PREDICTED: uncharacterized pro... [more]
gi|870865191|gb|KMT16258.1|5.5e-2347.2hypothetical protein BVRB_3g05... [more]
gi|902190063|gb|KNA11534.1|1.4e-1038.2hypothetical protein SOVF_1342... [more]
gi|720038353|ref|XP_010267960.1|5.6e-730.8PREDICTED: uncharacterized pro... [more]
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BLAST of Spo12282.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QX61_SPIOL4.5e-96100.Uncharacterized protein OS=Spi... [more]
A0A0J8CWC1_BETVU3.9e-2347.2Uncharacterized protein OS=Bet... [more]
A0A0K9QW92_SPIOL9.9e-1138.2Uncharacterized protein OS=Spi... [more]
A0A061EPF1_THECC5.1e-737.7Uncharacterized protein OS=The... [more]
D7SYL6_VITVI5.1e-736.3Putative uncharacterized prote... [more]
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BLAST of Spo12282.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo12282.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G06320.15.9e-728.9unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35096FAMILY NOT NAMEDcoord: 3..111
score: 2.4
NoneNo IPR availablePANTHERPTHR35096:SF1SUBFAMILY NOT NAMEDcoord: 3..111
score: 2.4

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006396 RNA processing
biological_process GO:0070475 rRNA base methylation
biological_process GO:0030488 tRNA methylation
cellular_component GO:0005737 cytoplasm
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0008173 RNA methyltransferase activity
RNA-Seq Expression