Spo12128 (gene)

Overview
NameSpo12128
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPutative mitochondrial outer membrane protein porin-like (Voltage-dependent anion-selective channel protein-like)
LocationSpoScf_53547 : 266 .. 673 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTTTCCGTGTTCCTTATCAGAGATCTGGCAAGGTACCATACAATTATCTTTCTAGTATTTTCTTACCTAAAGAGGCATGGTTCAAGATACTACGGGATAATGGTTCTAATTTGTGGAGTATAAATTATGTTAACAGGTTGAGCTTCAGTATTTGCATGAGTATGCTGGCATCAGCAGAAGCCTTGGTTTGACAGCAAACCCCATTGTCAACTTTTCTGGTGTTTTTGGAAACAGTACTCTTGCTTTGGGTACTGACCTCTCATTTGACACTGCTTCTGGAAACTTCACCAAATGCAATGCTGNCTTTGGGTACTGACCTCTCATTTGACACTGCTTCTGGAAACTTCACCAAATGCAATGCTGGACTAAGCTTTACTAATGATGATCTCATTGCATCTGTGAATGTG

mRNA sequence

AGTTTCCGTGTTCCTTATCAGAGATCTGGCAAGGTTGAGCTTCAGTATTTGCATGAGTATGCTGGCATCAGCAGAAGCCTTGGTTTGACAGCAAACCCCATTGTCAACTTTTCTGGTGTTTTTGGAAACAGTACTCTTGCTTTGGGTACTGACCTCTCATTTGACACTGCTTCTGGAAACTTCACCAAATGCAATGCTGNCTTTGGGTACTGACCTCTCATTTGACACTGCTTCTGGAAACTTCACCAAATGCAATGCTGGACTAAGCTTTACTAATGATGATCTCATTGCATCTGTGAATGTG

Coding sequence (CDS)

AGTTTCCGTGTTCCTTATCAGAGATCTGGCAAGGTTGAGCTTCAGTATTTGCATGAGTATGCTGGCATCAGCAGAAGCCTTGGTTTGACAGCAAACCCCATTGTCAACTTTTCTGGTGTTTTTGGAAACAGTACTCTTGCTTTGGGTACTGACCTCTCATTTGACACTGCTTCTGGAAACTTCACCAAATGCAATGCTGNCTTTGGGTACTGA

Protein sequence

SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGNFTKCNAXFGY
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo12128.1Spo12128.1mRNA


Homology
[Close]
BLAST of Spo12128.1 vs. NCBI nr
Match: gi|1256259|gb|AAA96275.1| (voltage-dependent anion channel protein [Spinacia oleracea])

HSP 1 Score: 129.0 bits (323), Expect = 3.200e-27
Identity = 64/70 (91.43%), Postives = 65/70 (92.86%), Query Frame = 1 

		  

Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SFRVP QRSGKVELQYLHEYAGIS SLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN
Sbjct: 95  SFRVPDQRSGKVELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 154

Query: 61  FTKCNAXFGY 71
           FTKCNA   +
Sbjct: 155 FTKCNAGLSF 164
[Close]
BLAST of Spo12128.1 vs. NCBI nr
Match: gi|731344143|ref|XP_010683253.1| (PREDICTED: mitochondrial outer membrane protein porin of 36 kDa [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 126.7 bits (317), Expect = 1.600e-26
Identity = 63/70 (90.00%), Postives = 64/70 (91.43%), Query Frame = 1 

		  

Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SFRVP QRSGKVELQYLHEYAGIS SLGLTANPIVNFSGV GNSTLALGTDLSFDTASGN
Sbjct: 95  SFRVPDQRSGKVELQYLHEYAGISTSLGLTANPIVNFSGVIGNSTLALGTDLSFDTASGN 154

Query: 61  FTKCNAXFGY 71
           FTKCNA   +
Sbjct: 155 FTKCNAGLNF 164
[Close]
BLAST of Spo12128.1 vs. NCBI nr
Match: gi|296086428|emb|CBI32017.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 120.9 bits (302), Expect = 8.700e-25
Identity = 58/70 (82.86%), Postives = 64/70 (91.43%), Query Frame = 1 

		  

Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SF +P QRSGKVELQYLHEYAGIS S+GLTANPIVNFSGV GN+TL+LGTDLSFDTA+GN
Sbjct: 95  SFIIPDQRSGKVELQYLHEYAGISTSIGLTANPIVNFSGVVGNNTLSLGTDLSFDTATGN 154

Query: 61  FTKCNAXFGY 71
           FTKCNA  G+
Sbjct: 155 FTKCNAGLGF 164
[Close]
BLAST of Spo12128.1 vs. NCBI nr
Match: gi|225424908|ref|XP_002276636.1| (PREDICTED: mitochondrial outer membrane protein porin of 36 kDa [Vitis vinifera])

HSP 1 Score: 120.9 bits (302), Expect = 8.700e-25
Identity = 58/70 (82.86%), Postives = 64/70 (91.43%), Query Frame = 1 

		  

Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SF +P QRSGKVELQYLHEYAGIS S+GLTANPIVNFSGV GN+TL+LGTDLSFDTA+GN
Sbjct: 95  SFIIPDQRSGKVELQYLHEYAGISTSIGLTANPIVNFSGVVGNNTLSLGTDLSFDTATGN 154

Query: 61  FTKCNAXFGY 71
           FTKCNA  G+
Sbjct: 155 FTKCNAGLGF 164
[Close]
BLAST of Spo12128.1 vs. NCBI nr
Match: gi|590649630|ref|XP_007032450.1| (Voltage dependent anion channel 1 [Theobroma cacao])

HSP 1 Score: 118.6 bits (296), Expect = 4.300e-24
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = 1 

		  

Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SFRVP QRSGKVELQYLH+YAGIS S+GLTANPIVNFSGVFG + LALGTDLSFDT +GN
Sbjct: 95  SFRVPDQRSGKVELQYLHDYAGISSSIGLTANPIVNFSGVFGTNVLALGTDLSFDTKTGN 154

Query: 61  FTKCNAXFGY 71
           FTKCNA   +
Sbjct: 155 FTKCNAGLSF 164
[Close]
BLAST of Spo12128.1 vs. UniProtKB/TrEMBL
Match: Q41368_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SVDAC1 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.200e-27
Identity = 64/70 (91.43%), Postives = 65/70 (92.86%), Query Frame = 1 

		  

Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SFRVP QRSGKVELQYLHEYAGIS SLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN
Sbjct: 95  SFRVPDQRSGKVELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 154

Query: 61  FTKCNAXFGY 71
           FTKCNA   +
Sbjct: 155 FTKCNAGLSF 164
[Close]
BLAST of Spo12128.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C4I7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g154570 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.100e-26
Identity = 63/70 (90.00%), Postives = 64/70 (91.43%), Query Frame = 1 

		  

Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SFRVP QRSGKVELQYLHEYAGIS SLGLTANPIVNFSGV GNSTLALGTDLSFDTASGN
Sbjct: 95  SFRVPDQRSGKVELQYLHEYAGISTSLGLTANPIVNFSGVIGNSTLALGTDLSFDTASGN 154

Query: 61  FTKCNAXFGY 71
           FTKCNA   +
Sbjct: 155 FTKCNAGLNF 164
[Close]
BLAST of Spo12128.1 vs. UniProtKB/TrEMBL
Match: F6HPF2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01650 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 6.000e-25
Identity = 58/70 (82.86%), Postives = 64/70 (91.43%), Query Frame = 1 

		  

Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SF +P QRSGKVELQYLHEYAGIS S+GLTANPIVNFSGV GN+TL+LGTDLSFDTA+GN
Sbjct: 95  SFIIPDQRSGKVELQYLHEYAGISTSIGLTANPIVNFSGVVGNNTLSLGTDLSFDTATGN 154

Query: 61  FTKCNAXFGY 71
           FTKCNA  G+
Sbjct: 155 FTKCNAGLGF 164
[Close]
BLAST of Spo12128.1 vs. UniProtKB/TrEMBL
Match: A0A061EEK9_THECC (Voltage dependent anion channel 1 OS=Theobroma cacao GN=TCM_018364 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.000e-24
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = 1 

		  

Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SFRVP QRSGKVELQYLH+YAGIS S+GLTANPIVNFSGVFG + LALGTDLSFDT +GN
Sbjct: 95  SFRVPDQRSGKVELQYLHDYAGISSSIGLTANPIVNFSGVFGTNVLALGTDLSFDTKTGN 154

Query: 61  FTKCNAXFGY 71
           FTKCNA   +
Sbjct: 155 FTKCNAGLSF 164
[Close]
BLAST of Spo12128.1 vs. UniProtKB/TrEMBL
Match: A9P802_POPTR (Porin family protein OS=Populus trichocarpa GN=POPTR_0010s04240g PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 8.700e-24
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = 1 

		  

Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SF+VP QRSGKVELQY HEYAGIS SLGLTANPIVNFSGV G++ +ALGTDLSFDTA+GN
Sbjct: 95  SFKVPDQRSGKVELQYQHEYAGISTSLGLTANPIVNFSGVVGSNVVALGTDLSFDTATGN 154

Query: 61  FTKCNAXFGY 71
           FTKCNA   Y
Sbjct: 155 FTKCNAGLSY 164
[Close]
BLAST of Spo12128.1 vs. ExPASy Swiss-Prot
Match: VDAC2_SOLTU (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 8.600e-25
Identity = 54/70 (77.14%), Postives = 63/70 (90.00%), Query Frame = 1 

		  

Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SF VP Q+SGKVELQYLHEYAGI+ S+GLTA+P+VNFSGV GN+T+ALGTDLSFDTA+GN
Sbjct: 95  SFVVPDQKSGKVELQYLHEYAGINTSIGLTASPLVNFSGVAGNNTVALGTDLSFDTATGN 154

Query: 61  FTKCNAXFGY 71
           FTKCNA   +
Sbjct: 155 FTKCNAGLSF 164
[Close]
BLAST of Spo12128.1 vs. ExPASy Swiss-Prot
Match: VDAC1_SOLTU (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 8.100e-23
Identity = 50/70 (71.43%), Postives = 60/70 (85.71%), Query Frame = 1 

		  

Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SFRVP QRSGK+E+QYLH+YAGI  S+GLTANPIVNFSGV G + +ALGTD+SFDT +G+
Sbjct: 95  SFRVPDQRSGKLEVQYLHDYAGICTSVGLTANPIVNFSGVVGTNIIALGTDVSFDTKTGD 154

Query: 61  FTKCNAXFGY 71
           FTKCNA   +
Sbjct: 155 FTKCNAGLSF 164
[Close]
BLAST of Spo12128.1 vs. ExPASy Swiss-Prot
Match: VDAC1_ARATH (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana GN=VDAC1 PE=1 SV=3)

HSP 1 Score: 105.9 bits (263), Expect = 1.800e-22
Identity = 51/70 (72.86%), Postives = 58/70 (82.86%), Query Frame = 1 

		  

Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SF+VP Q SGKVELQYLHEYAGIS S+GLT NP VNFSGV G++ LA+GTD+SFDT SGN
Sbjct: 95  SFKVPDQNSGKVELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGN 154

Query: 61  FTKCNAXFGY 71
           FTK NA   +
Sbjct: 155 FTKINAGLSF 164
[Close]
BLAST of Spo12128.1 vs. ExPASy Swiss-Prot
Match: VDAC1_WHEAT (Mitochondrial outer membrane porin OS=Triticum aestivum GN=VDAC1 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.900e-20
Identity = 47/70 (67.14%), Postives = 55/70 (78.57%), Query Frame = 1 

		  

Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SF VP Q+SGKVELQYLH+YAGI+ S+GLTANP+VN SG FG S LA+G D+S DTA+ N
Sbjct: 95  SFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSGAFGTSALAVGADVSLDTATKN 154

Query: 61  FTKCNAXFGY 71
           F K NA   Y
Sbjct: 155 FAKYNAALSY 164
[Close]
BLAST of Spo12128.1 vs. ExPASy Swiss-Prot
Match: VDAC_PEA (Outer plastidial membrane protein porin OS=Pisum sativum GN=POR1 PE=1 SV=2)

HSP 1 Score: 95.1 bits (235), Expect = 3.200e-19
Identity = 47/70 (67.14%), Postives = 52/70 (74.29%), Query Frame = 1 

		  

Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SF+VP Q SGKVELQYLHEYAGIS S+GL ANPIVNFS V G + LA G D+SFDT  G 
Sbjct: 95  SFKVPEQTSGKVELQYLHEYAGISSSVGLKANPIVNFSSVIGTNALAFGADISFDTKLGE 154

Query: 61  FTKCNAXFGY 71
            TK NA   +
Sbjct: 155 LTKSNAAVNF 164
[Close]
BLAST of Spo12128.1 vs. TAIR (Arabidopsis)
Match: AT3G01280.1 (voltage dependent anion channel 1)

HSP 1 Score: 105.9 bits (263), Expect = 1.000e-23
Identity = 51/70 (72.86%), Postives = 58/70 (82.86%), Query Frame = 1 

		  

Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SF+VP Q SGKVELQYLHEYAGIS S+GLT NP VNFSGV G++ LA+GTD+SFDT SGN
Sbjct: 95  SFKVPDQNSGKVELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGN 154

Query: 61  FTKCNAXFGY 71
           FTK NA   +
Sbjct: 155 FTKINAGLSF 164
[Close]
BLAST of Spo12128.1 vs. TAIR (Arabidopsis)
Match: AT5G15090.1 (voltage dependent anion channel 3)

HSP 1 Score: 85.5 bits (210), Expect = 1.400e-17
Identity = 39/68 (57.35%), Postives = 52/68 (76.47%), Query Frame = 1 

		  

Query: 3   RVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGNFT 62
           ++P  +SGK E+QY H+YAGIS S+G TA PIVNFSGV G + L+LGTD++++T SGNF 
Sbjct: 97  KLPDHKSGKAEVQYFHDYAGISTSVGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFK 156

Query: 63  KCNAXFGY 71
             NA F +
Sbjct: 157 HFNAGFNF 164
[Close]
BLAST of Spo12128.1 vs. TAIR (Arabidopsis)
Match: AT5G57490.1 (voltage dependent anion channel 4)

HSP 1 Score: 69.3 bits (168), Expect = 1.100e-12
Identity = 29/70 (41.43%), Postives = 49/70 (70.00%), Query Frame = 1 

		  

Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SF++P  +SGK+++QY+H +A ++ S+GL   P+++ S   G+  + LG ++SFDTAS +
Sbjct: 95  SFKIPDHKSGKLDVQYVHPHATLNSSIGLNPTPLLDLSATIGSQNVCLGGEVSFDTASSS 154

Query: 61  FTKCNAXFGY 71
            TK NA  G+
Sbjct: 155 LTKYNAGIGF 164
[Close]
BLAST of Spo12128.1 vs. TAIR (Arabidopsis)
Match: AT5G67500.2 (voltage dependent anion channel 2)

HSP 1 Score: 58.5 bits (140), Expect = 1.900e-9
Identity = 24/66 (36.36%), Postives = 41/66 (62.12%), Query Frame = 1 

		  

Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SF+VP   S K+E+QY H++A ++ +  L  NP+++ +   G+  ++ G +  +DT S  
Sbjct: 122 SFKVPDYNSAKLEVQYFHDHATVTAAAALKQNPLIDITATLGSPVISFGAEAGYDTTSKT 181

Query: 61  FTKCNA 67
           FTK NA
Sbjct: 182 FTKYNA 187
The following BLAST results are available for this feature:
BLAST of Spo12128.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|1256259|gb|AAA96275.1|3.2e-2791.4voltage-dependent anion channe... [more]
gi|731344143|ref|XP_010683253.1|1.6e-2690.0PREDICTED: mitochondrial outer... [more]
gi|296086428|emb|CBI32017.3|8.7e-2582.8unnamed protein product [Vitis... [more]
gi|225424908|ref|XP_002276636.1|8.7e-2582.8PREDICTED: mitochondrial outer... [more]
gi|590649630|ref|XP_007032450.1|4.3e-2481.4Voltage dependent anion channe... [more]
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BLAST of Spo12128.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
Q41368_SPIOL2.2e-2791.4Uncharacterized protein OS=Spi... [more]
A0A0J8C4I7_BETVU1.1e-2690.0Uncharacterized protein OS=Bet... [more]
F6HPF2_VITVI6.0e-2582.8Putative uncharacterized prote... [more]
A0A061EEK9_THECC3.0e-2481.4Voltage dependent anion channe... [more]
A9P802_POPTR8.7e-2481.4Porin family protein OS=Populu... [more]
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BLAST of Spo12128.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
VDAC2_SOLTU8.6e-2577.1Mitochondrial outer membrane p... [more]
VDAC1_SOLTU8.1e-2371.4Mitochondrial outer membrane p... [more]
VDAC1_ARATH1.8e-2272.8Mitochondrial outer membrane p... [more]
VDAC1_WHEAT2.9e-2067.1Mitochondrial outer membrane p... [more]
VDAC_PEA3.2e-1967.1Outer plastidial membrane prot... [more]
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BLAST of Spo12128.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT3G01280.11.0e-2372.8voltage dependent anion channe... [more]
AT5G15090.11.4e-1757.3voltage dependent anion channe... [more]
AT5G57490.11.1e-1241.4voltage dependent anion channe... [more]
AT5G67500.21.9e-936.3voltage dependent anion channe... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023614Porin domainGENE3D2.40.160.10coord: 2..70
score: 3.0
IPR027246Eukaryotic porin/Tom40PFAMPF01459Porin_3coord: 7..70
score: 2.2
NoneNo IPR availablePANTHERPTHR11743VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNELcoord: 1..70
score: 4.9
NoneNo IPR availablePANTHERPTHR11743:SF31SUBFAMILY NOT NAMEDcoord: 1..70
score: 4.9

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044070 regulation of anion transport
biological_process GO:0006782 protoporphyrinogen IX biosynthetic process
biological_process GO:0009657 plastid organization
biological_process GO:0015031 protein transport
biological_process GO:0031323 regulation of cellular metabolic process
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0060255 regulation of macromolecule metabolic process
biological_process GO:0080090 regulation of primary metabolic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:2001295 malonyl-CoA biosynthetic process
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0043631 RNA polyadenylation
biological_process GO:0034660 ncRNA metabolic process
biological_process GO:0006780 uroporphyrinogen III biosynthetic process
biological_process GO:0009790 embryo development
biological_process GO:0051301 cell division
biological_process GO:0006499 N-terminal protein myristoylation
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0006366 transcription by RNA polymerase II
biological_process GO:0043248 proteasome assembly
biological_process GO:0016255 attachment of GPI anchor to protein
biological_process GO:0009932 cell tip growth
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0010090 trichome morphogenesis
biological_process GO:0006897 endocytosis
biological_process GO:0006909 phagocytosis
biological_process GO:0051788 response to misfolded protein
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0006810 transport
biological_process GO:0008152 metabolic process
biological_process GO:0001510 RNA methylation
biological_process GO:0080167 response to karrikin
biological_process GO:0006508 proteolysis
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0042545 cell wall modification
biological_process GO:0006857 oligopeptide transport
biological_process GO:0034968 histone lysine methylation
biological_process GO:0006457 protein folding
biological_process GO:0032259 methylation
biological_process GO:0009987 cellular process
biological_process GO:0052546 cell wall pectin metabolic process
biological_process GO:0009909 regulation of flower development
biological_process GO:0009058 biosynthetic process
biological_process GO:0055085 transmembrane transport
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0044085 cellular component biogenesis
biological_process GO:0016310 phosphorylation
biological_process GO:0015996 chlorophyll catabolic process
biological_process GO:0048767 root hair elongation
biological_process GO:0009407 toxin catabolic process
biological_process GO:0009735 response to cytokinin
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0050983 obsolete deoxyhypusine biosynthetic process from spermidine
biological_process GO:0008612 peptidyl-lysine modification to peptidyl-hypusine
biological_process GO:0006506 GPI anchor biosynthetic process
biological_process GO:0006833 water transport
biological_process GO:0007033 vacuole organization
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0046686 response to cadmium ion
biological_process GO:0010498 proteasomal protein catabolic process
biological_process GO:0009555 pollen development
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0006972 hyperosmotic response
biological_process GO:0007030 Golgi organization
biological_process GO:0051510 regulation of unidimensional cell growth
biological_process GO:0006096 glycolytic process
biological_process GO:0006007 glucose catabolic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0007010 cytoskeleton organization
biological_process GO:0000902 cell morphogenesis
biological_process GO:0016049 cell growth
biological_process GO:0006816 calcium ion transport
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009853 photorespiration
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006397 mRNA processing
biological_process GO:0009553 embryo sac development
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0051302 regulation of cell division
biological_process GO:0051604 protein maturation
biological_process GO:0000338 protein deneddylation
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0009640 photomorphogenesis
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0042023 DNA endoreduplication
biological_process GO:0043090 amino acid import
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0009423 chorismate biosynthetic process
biological_process GO:0009651 response to salt stress
biological_process GO:0006629 lipid metabolic process
biological_process GO:0008643 carbohydrate transport
biological_process GO:0033587 shikimate biosynthetic process
biological_process GO:0016567 protein ubiquitination
biological_process GO:0009094 L-phenylalanine biosynthetic process
cellular_component GO:0000786 nucleosome
cellular_component GO:0019773 proteasome core complex, alpha-subunit complex
cellular_component GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
cellular_component GO:0030659 cytoplasmic vesicle membrane
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0046658 anchored component of plasma membrane
cellular_component GO:0032991 protein-containing complex
cellular_component GO:0042651 thylakoid membrane
cellular_component GO:0005839 proteasome core complex
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
cellular_component GO:0005730 nucleolus
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005576 extracellular region
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0000325 plant-type vacuole
cellular_component GO:0009343 biotin carboxylase complex
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009524 phragmoplast
cellular_component GO:0009506 plasmodesma
cellular_component GO:0033180 proton-transporting V-type ATPase, V1 domain
cellular_component GO:0005840 ribosome
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0042765 GPI-anchor transamidase complex
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0000502 proteasome complex
cellular_component GO:0005634 nucleus
cellular_component GO:0005829 cytosol
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0005618 cell wall
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0005741 mitochondrial outer membrane
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0016020 membrane
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0005768 endosome
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0005665 DNA-directed RNA polymerase II, core complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:0048046 apoplast
cellular_component GO:0005856 cytoskeleton
molecular_function GO:0003856 3-dehydroquinate synthase activity
molecular_function GO:0042802 identical protein binding
molecular_function GO:0034038 deoxyhypusine synthase activity
molecular_function GO:0008308 voltage-gated anion channel activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016758 transferase activity, transferring hexosyl groups
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016853 isomerase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0050514 homospermidine synthase (spermidine-specific) activity
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0002020 protease binding
molecular_function GO:0008081 phosphoric diester hydrolase activity
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
molecular_function GO:0051287 NAD binding
molecular_function GO:0008422 beta-glucosidase activity
molecular_function GO:0005351 carbohydrate:proton symporter activity
molecular_function GO:0004075 biotin carboxylase activity
molecular_function GO:0008233 peptidase activity
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0008757 S-adenosylmethionine-dependent methyltransferase activity
molecular_function GO:0035673 oligopeptide transmembrane transporter activity
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003989 acetyl-CoA carboxylase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0036459 thiol-dependent ubiquitinyl hydrolase activity
molecular_function GO:0004652 polynucleotide adenylyltransferase activity
molecular_function GO:0004852 uroporphyrinogen-III synthase activity
molecular_function GO:0008236 serine-type peptidase activity
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0004298 threonine-type endopeptidase activity
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0000035 acyl binding
molecular_function GO:0019706 protein-cysteine S-palmitoyltransferase activity
molecular_function GO:0046982 protein heterodimerization activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo144410.82Barchart | Table
Spo019140.80Barchart | Table
Spo271020.77Barchart | Table
Spo246250.76Barchart | Table
Spo001750.76Barchart | Table
Spo050290.76Barchart | Table
Spo146870.76Barchart | Table
Spo141940.76Barchart | Table
Spo148490.76Barchart | Table
Spo009360.76Barchart | Table
Spo122530.75Barchart | Table
Spo066810.75Barchart | Table
Spo008980.75Barchart | Table
Spo122020.75Barchart | Table
Spo121760.74Barchart | Table
Spo060300.74Barchart | Table
Spo243680.74Barchart | Table
Spo195580.74Barchart | Table
Spo258510.73Barchart | Table
Spo012040.73Barchart | Table
Spo036180.73Barchart | Table
Spo055310.73Barchart | Table
Spo172680.73Barchart | Table
Spo085290.73Barchart | Table
Spo210670.73Barchart | Table
Spo134590.73Barchart | Table
Spo182690.72Barchart | Table
Spo156030.72Barchart | Table
Spo269580.72Barchart | Table
Spo167860.72Barchart | Table
Spo068050.72Barchart | Table
Spo117330.71Barchart | Table
Spo020850.71Barchart | Table
Spo036080.71Barchart | Table
Spo052280.71Barchart | Table
Spo055140.71Barchart | Table
Spo057310.71Barchart | Table
Spo110980.71Barchart | Table
Spo265090.70Barchart | Table
Spo031970.70Barchart | Table
Spo087990.70Barchart | Table
Spo154200.70Barchart | Table
Spo245940.70Barchart | Table
Spo089690.70Barchart | Table
Spo130310.70Barchart | Table
Spo144380.70Barchart | Table
Spo085460.70Barchart | Table
Spo192060.70Barchart | Table
Spo021070.69Barchart | Table
Spo273470.69Barchart | Table
Spo019290.69Barchart | Table
Spo115430.69Barchart | Table
Spo214650.69Barchart | Table
Spo238010.69Barchart | Table
Spo062940.69Barchart | Table
Spo069620.69Barchart | Table
Spo055570.69Barchart | Table
Spo055350.69Barchart | Table
Spo053060.69Barchart | Table
Spo049960.69Barchart | Table
Spo090150.69Barchart | Table
Spo041460.69Barchart | Table
Spo033810.69Barchart | Table
Spo187140.68Barchart | Table
Spo019980.68Barchart | Table
Spo042820.68Barchart | Table
Spo051270.68Barchart | Table
Spo064730.68Barchart | Table
Spo089050.68Barchart | Table
Spo099490.68Barchart | Table
Spo109690.68Barchart | Table
Spo138870.68Barchart | Table
Spo168420.68Barchart | Table
Spo180490.68Barchart | Table
Spo181030.68Barchart | Table
Spo200710.68Barchart | Table
Spo254450.68Barchart | Table
Spo270640.67Barchart | Table
Spo139530.67Barchart | Table
Spo000710.67Barchart | Table
Spo239080.67Barchart | Table
Spo168210.67Barchart | Table
Spo052250.67Barchart | Table
Spo110950.67Barchart | Table
Spo248570.67Barchart | Table
Spo196350.67Barchart | Table
Spo173290.67Barchart | Table
Spo173710.67Barchart | Table
Spo135790.67Barchart | Table
Spo176790.67Barchart | Table
Spo177550.67Barchart | Table
Spo098190.67Barchart | Table
Spo188420.66Barchart | Table
Spo168810.66Barchart | Table
Spo174750.66Barchart | Table
Spo027310.66Barchart | Table
Spo087720.66Barchart | Table
Spo191720.66Barchart | Table
Spo085890.66Barchart | Table
Spo085400.66Barchart | Table
Spo195590.66Barchart | Table
Spo006150.66Barchart | Table
Spo206770.66Barchart | Table
Spo209570.66Barchart | Table
Spo072040.66Barchart | Table
Spo066760.66Barchart | Table
Spo216910.66Barchart | Table
Spo231920.66Barchart | Table
Spo236470.66Barchart | Table
Spo236790.66Barchart | Table
Spo059550.66Barchart | Table
Spo135160.66Barchart | Table
Spo123940.66Barchart | Table
Spo113400.65Barchart | Table
Spo060180.65Barchart | Table
Spo060090.65Barchart | Table
Spo059900.65Barchart | Table
Spo096740.65Barchart | Table
Spo000730.65Barchart | Table
Spo229560.65Barchart | Table
Spo144540.65Barchart | Table
Spo234200.65Barchart | Table
Spo098030.65Barchart | Table
Spo100170.65Barchart | Table
Spo066730.65Barchart | Table