Spo12060 (gene) | SpinachBase

Overview


Name	Spo12060
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	RNA-binding protein
Location	chr4 : 8890442 .. 8899543 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTGCATGTTCTCCAATCAAGTCTATGTCGAGGTTTCCAGAATGAAAGTCCTTGCAAATTAATCAAACAGAGAAAACAGCACTGCAAATTAGGCTAAAACCCACTTTCAATTTCAACCCTTTTTCGTGTTCATCTTCTTCGTCTCGAACAACAATGTCGTCGGTTGAAAATCCGAGCTTACAGCAACCCCCACAATCTCCAACACACGAACAACTTCTCGTTGGTAAGCGCTTAATCTCCCCCTTAATTTTTATCTCCTGTTTCCTTTAATTGAAGCTATAATATCTGATTTATTGATTTTATACCCTATAATCTGTTAAAAAATTGATTCTTGATTCGTTTGAAGCTATGTTCAGTGACAATCTATGATTCTTTTTTGCCCTTTTGAGTTAATAATCCGATGAATTGCATGCTTATACCTTTATTAGATTGCACTTGTTTTAATTTGAGAAATGGGTTTTGTTCCTTGATTGTATTGAACCCTAAAGTTGAATGATTTAGGTTAAGTTCAGTTCATTATGCTGGAGATATTGTAACTTATTATACTATTTGGGGATGTTTGAAAAGCCTTGGATATGTGATTGAAAGTTAGAAATTTCCTACTTAGGTTGAACAATAGAGAGTGTGGGGATGTTCATATTTTGAAAGCATGTCATGCCCTTCATTGTGAGATGTGGCAATTATTTCTGAATGGAGGGAGTTTAGATTCTTTTACTTCTTAGGGTATGGTTGAACATGAGGTGTGAACGGGCATTGCTTTCAAGGTTTCCGGTTGCTAGGGTTTTAAACTTTTAATGTAGCTGGGAAACCCATTCTTTTGTTCGAAACATTTGTGTGTGAAAACGCTTCAGAGTAAACGGGCATTGCTTCCAAGGTTTCCGGTTGCTAGGGTTTTAATGTAGTTGGGAAACCCATGCGTTTGTTTGAAACGTTTGTGTTTCGTCGAGGAAGTCGTACTTTATTTTCACATATATGTGGTTTTTAATTGTCATTGCTTGTTATAGGGACAGCTGGGCCAACGAGTCAACATTTACCAGAAAATTCTCTAGTGGGATGGTATATAATCGATCCAACCCAGCAGCAGATTGGCCCGTACACAATTGCTGAATTGAAGGGTGAGTTTTACCTTACCAAGTAATGTAGTTCTGTGTGAATGAGGCATTGGTTTTATGTTTTGTACTTCTGTGTGTATAAGGCCTTGCTTGGGTGTTTAGGATTGAGTGATTGACATGTGTGATACATGCATCGATTCATGTTGTGTTTCTCCAGAATGTTGCATTTGAAAAACTAAATTTTGCCTGTTTTTGTAAGTAATAACTAATAACCTAGTAGTCAAAGTGCAAACAGAGTAGTTGAATGTTCTTTGAAGTTTGAACTGTTGATATGGTGCTACCAGCAAATCTTATTAACTTAATTTAGGACATTTCCTCTCAATGGAAGAGGAAATATCAGCAAAGAAGATTGGAAATTCTGGAGAAATATTGAGTGAGGAAATGACTTGGGAAATAAGAAAGTTTTAGGCTGCCATGGTGAAATGTATATACAATTGATTTACATTCACCTATCTGGCTATGCTTTAAATAACAGATTTTCCCTCGAGGATTTTCCTTTTGAAATTTATTAGTTCCTTTTGTCTCTTTCAATTACAGTTCTACCAGTTACCAATTGCACGGTTACACGATCTGTATCATGTTGAAACAACTTCTTAGCTTGTTTACTTCGCCTGAGCAGAGCATTTCCTAAACGGATACCTGACAGAGAGTACCTTTGTATGGGCTCAAGGAAGACCTGATTGGCAGCCTCTTTCATCTGTTCCCGAGTTGATGACTGGCGTACACTGTCATGCAACTGAACTTTCAGCTTCAGGTCAGGAACTTCATTCTTATTATCATTCAGGAACCTTATTCTTATTATCATTCAGGACATTGGCGGATCTAGAAATTGTACTAAGTGGGGTCACTACTCACTATTACAAAATTACTGAAAAATTAAGTACTTCTTAATACGAATTAATCAAAAACTAACTAAAATTATGCAAATTTTTTCGGCCAAGTGGGGTCACTTATACATGGGATCCGTCAATGATTCAGGAGAGACGATTCTTATACATAGTGATTTTCTTGCAGTACCTGCTATCAAAGATGAAGAGTTCGAGAAATGGCAAAAGGAAGTGAAAGAGGCTGAGGCTGAAGCTGAAGCTGCGATGCTAAATAATGGTTCTGCTTCAGGTGATGTAGATGGAGTTGAGCAAGAGAGACCCTCAACTCCACCTGACGGGGAGGAAGAATTTACCGATGATGATGGAACTACTTACAAGTGGGATCGCAGTCTTAGAGCATGGGTTCCTCAGGTTGGTGCTTTAGTATTATGGCTTTCAGATTATTATATGACCTATGCTACAAATTCATTACTCTTGTTATTATTTTAATGGGACTATCCCTTCTTTTGTAGGTTATTTACCTTTTTTTTTTAAAGAATTATATCCGTCTAGAAAGGAGCTACCTATTTCCCTTCCTGTCATTGCTAATCCAGTAAGCTTGCTTCTTAAAAGAGAGAGATATGCTTTGTCCTTTTGCACTTTTGCTAATAAAAGCATTTTGAATGAATCATTCAGTTTGATGTTGGCATGGTTTCCCTTTCCCTTATGGTCCGGAGTTTGAAATTGGTATACCAATGCAGTAGGCAAAGAGATTACCTTGGAAGCCACAGCTATTATCAAAATTTCTGGTCTAGCATTTATTTTGGTGTTTCCTTTGGACTTGTGCAGTAAATTGTGTTTCAGTTTTACAGTGATTTATTGAAAATATTTACAGTCAAAACCGCGGAATATATGAAACAGTCGTTAATTGATTGTTTTCTGGCAGGAGAACCAAGCAGATGAAGAAGAGGGATACAGATTGGAAGAGATGACATTTGTCGAACAAGAGGAAGTTTTTCCTGTACTAACTGTAGATGACACTCTTGCAAATAAAGAAGACACTACTGATGCTGGGGCAGTAGAAGAAAAGGATACAAAACAACGTGCGAAGAGAAAAGAGCCAGAACCAAAGACTGAGAAAAAGGTAATGCATATGCTTTTAGTTGTCTCTAATATTCTTTCACATAAGTAGCTTGCTACTATTTTCATTGTAGTGTTTAACATCACTTGTAGTTGCCGTAGCACCCATGTTATATTGAAAGAGTGGTTTTTGTGTGTGTCAGGATGGGAGAAGGGCCGAAGGGGTGGGATTAAAGGTAGTAGGCACGGTATTACCAACAATTCACGCCCTGTTGCATAAAAACACATTCTTATTTTTCACATCCTTGGTTAACCTTGTGTGCAGATAAAGGGCATACGTAGTTACTTATGCGTGTTTCTTCTGTACTGTCTTTCTTAGATGCCTTTGAGTTTTGTTACTGCCTTACTGGAATTGGTTGTAGAAGATGAATCAGTGTAGAGTCAGTTTTGTCCTCATCTTTTACAATATACTTTAACAGGAAGCAAATAAACCGCCAGACAGTTGGTTCGAGTTGAAGCAGAACACGCATGTTTATGTGACTGGATTGCCAGATGATGTTACAATCGAGGAAGTGAGTCCTGATTACCTCCTAATAAGCATATTTAATGAATTATCCGCAAAGATTTTTTTTGTCTTAAAGCTAGCATAGGATGTATATAGTTTGTACTTGTATTTGCCTCTGCTATGTTATATTTAACATATTTGGTAATCCTATACAGGTGGTGGAGGTTTTCTCCAAGTGTGGCATAATAAAGGAGGTAAGGACTAAGGATAAAGCTTCTATAATTCTATTCTTTTATGCGTAAAGTTAAATATGCTTTTATAGGAAATGGCACACGTACGTGAACATCCGTACAATTCCTATTGAAAGTATATTAGTTTAATTTGTTTTAGGTAGGTGGGCTGGGAAATCGAAAGTGTGGCTCTCTTTTGTATGTGTTTTTATTTTCTTAGAAATGTGTTCGATCGCTTGATAAGAAATGGCATATATAGTGTTTTCTCTTTAAGCTTTACCAACATCACCTAGACAAAGTGTCTATCTTTTTTTCTTCCTTTTTCTAATGGACTAAATTAAAATGTCTCATTTAGTTTTGCAACTGTGACGTAGCTGAAATTTGTGGCTTTTGGGATCAGGGGTCTAATTAAACAACCTCTGTATTAGTAGGGTGAATGCTGCAACCTTCATGCTGGATCCAGTCCACTTGGCTTACACTGTGGGGACCCCTTCAAAGGCATTGGTTTAATGTTGACGTCGATGTTGTAGGGAAAAATCTTTAAAACAAAATTGATGAACATGTAAAGAAGGCCATACTCTATGTGTACAAAATTTCAGGCACTTCAGCCTCTCCATAAGACTCTACTCCTCCTGCTTGTTGTAGGAATTAGAACTCCACTGAATTATTACGTGACTGATATTTGAGCATGCCACCTCCTGACACCTGGGACTTTTCTTTCTAGTCTGTGATATGCATAGAATTACTAGAAGCCGCTGATCTAATTTTAAACGTAGCCCTATGCTTCCTTTTGATTTTATAGAGAAGGCAAACAAAAGTCCACGACCAACATGCATCACACATTCACACTTATGAAAACCTAAATCTATAATTTTAATGCTTATTGATGTTTTCTGTAGTCATAGAGATTGGTCTTAGCTTATTTCAACTAATTCTTCATACTGGAATTGACTGCATATTCAACTCTTGGAGATGTTTAGATATTTCTCTGCTTGTGTGAGAGTTAGAAATTTGGTTTTGTGGCTCACTATGTTGACAACTTCAATTTTGATTTTGTTATGGAATTCTCTCTAACTGCATACCACAATCCCATTGTTGACTTTATTTATCCACAGGATCCTGAGAGTAAAAAGCCCCGTGTGAAACTATACTTCGACAAGGAGACTGGAAGAAAGAAGGGGGATGCACTTGTTACATATCTAAAGGTATTTTCTATATTTGGCTGGATACTAAAATCAATGTGCAATAGAACTATTATTAGTATCTCAAGATTTCAATTTTTTTTTTCCAACTTATACCAGGAGCCATCAGTAGCCTTGGCGACACAACTATTAGATGGGGCATCTTTCCGGCCTGGAGAGAAGATAACTATGTCTGTAACCCCTGCGAAGTTTGAGCAGAAAGGTAAATATGCGCATTAATACTCTGTTTTCAGATATAGAGGCTCATTGTTTGATTAATTCTTAATATTCAATGCCCTCATGGTAGTGCCTGGTCCTAAGTTGCGAAATATGATAGCTTGAGGCTCACATGTTCTTGATGTGTTTTTATACTCTTTTTTCCAGGGGAGAGATTTATTCCCAAACAGACGGATAAAAAGAAGAAAAACAAACTAAAAAGGGTTGAAGAGAAGATGCTTGGTTGGGGTATTATTCTTGTCCTTTCTCATCCTTTTTTGAGTTTCACTATTGATGTTGCGGGATTCGGAAAGCATCTTTAACCTTATGCGCTTCTATAAAGATGACTAATTGTTGATGTTTAGAGCTGAATTATGCTCTTGTTTTGACATAACTATCTTCAGTATTGGTTGGTTTCCTGGAATTGCCCCATTGCTTTTTTGCGATAGTTAGCTGAAAAGTCCAAGTCTCATTCTTTTCTCCTCCTTTAATCAATTTTTTGATTATTATATTGGAAAATGTACTGTCCTGTCAACTGTTGCACTCATATAACGTATAATTGCATGTATTTTTGATTTTCTTAGTCACATTTTCTTCTCATTGCTGCTACTTTTGGTGACGTCGTTAGTTCGTTACTGCTCTTATATGCGAACTATCATTTGAATTTAACGAGGAAACTTATGCATATGATGGCATTTAATTTTCTTATAGCTAGGCTTTCCTTAGATTCAATACTCATCCCGGACCTTTCTTTTTGAGCATTGTTTTGCTGCTTCATTTTGCATAAATCTTGCAATATTGTTGGAATGGAAGTATGGCACATGCTTTCCAACATGAACTTTTCAATCATATTGCCACGTCATATATATTTGGGCTTACCAACATGTTGCCTTGTTTTTAGGACCTTAAGCCACTTTCAGGCGTATACTTTGGCCAACTTTGTATTCTTGTATGCTTTAAAGAACAAAAGGACAAGCAGTCAAGCACCCACTTTTTCTCTCAATTTCCAAAATCTCAAACCTGAATAATCGCAATTTTTAAACCTATATAAAGCAGTACAAATACAACATATCTTCCTGCCATGTGGAAGTTTGATTTTGGATTTGTGATAGTATAATTAGTTCAAAAGCATAATTAGTTCCTGCGATGTAGAAGTTTGATTTTGGATTTGTGATTGTATTTGTTATATCTTCCTTTACATGTTAACCTTACCATCTTATTCATTGTTAGGTGGTCGTGATGATTCAAAACTTATGATCCCGGCTACGGTTATCCTGAGCAACATGTTTACAACTGCGGAAATGAGAGTAAGTGTAAAATAAATTTCATAATTCTGCGTCTCATCTCCAAGGTCCCGAAAGAACATGTTTTAAAGCAGTAGTGTAAAAAAAGTACAGGATTGAACAACTCATGCCTTAACAAGCCCATTGATTGTTGCAATCATTTGTCTTTTTTGAAAGAAAGAGATAGTGAACAGAATGTTTGCGCGAGTGGGCATATTTTTTTTTGTTTTTGTAAATTAAGAAACAATTTTCTGTGAACTTCTCTCATCTCCATTGGACGTTTTTCAGAGTAGACTGCAAAATCCTTCATGCCCAGTTTTGATTTGTTGAATGATATTGTTGTTGCTACTTCTACAGGAAGAGTTAAGTTTACGTGATGAATTGGAGGTAGATGTCCGTGAGGAATGTGGAAAGCTTGGTCCAGTGGATTTCATCAAGGTAAGTGGCTTTTTTTAACTCGTTTGGAACCGAGAAGACGTACTTCGGTACTTGTATATCCTTTAAGAAGAGTTGGAATGTACTTACAGTTAAAGGAATCATTAAACATAAGCTATTCATCTTATTAATCTCATACATTTTAAGAAGTTCCTCCGAGTTGATGGTTGCATGTATTAGGAGATGACTCGAATAGTTCCAAATTTATTTCTGGTTTTACAAATTACTTCCTCCTTTTCTCAATAGATACACATTTTTACCTTTTAAACTATTATTTTTTACGAACATTGACCACATTTAGTTACACTCCGTAACATGTTAAAAAAAAGAATTCACTACTCTAGTTTGTTGTTCGGCTTATCTCAATGTACATTTTCAATATATGATTCAAAATAAGTTTTTATATAATGGTCAAAGTTGTGCGTTTCTATGAGCGTCTAATCATAATACAAGTAATAATAATAATGATAGTCCTAGTAGTAAACTAATAATAGTAAAGGAGAAAACAACTATCTTGGTGGCTGTCCTCACATTATCCCTAAAATAAAAATAATATTCCATCTGCTTCGGATTTTGTTTTGTTTTTGTTTCTGATTTCCTTTCATTGGGCAGGTCTGTGAGAACAACCCGCACGGAGTTGTGCTAGTCAGGTACAAGGACAGAACCGATGCTAAAAAGTGTATAGACTTGATGGATGGAAGGTGGTAAGTACAAAAGTTTATTGTTTTTGAACGAAATAGTGCGTAGCATAACCTATACGGTTTTGTAGCAAAGCTTGTTTCTTGCTCAATTGTAGGTTAGTCTATGTTTCTTTCATATGGCTGCAGTCGGCATCCATGTGTTTTAAGTTTTTAACACATATTGCATGATCTCATCTACATGATCTCATTGATACTCCCTCTGTCCCTAAATATTTTGGTAAAACTATAAAAGTTTGACCATGAAATCTCACTAATTTATAACAAATAATGTAGTCGTGTCACGTGGGATCTTGTTAGACTCGGTTCAATATATATTTTTAGAATATCAACTTTTTACAATTTTTACGCTTAATAGAATTGGAAATATTTACGTTTTAAATCGCGTTTTGGAGACCTTGTAAAGTCAAATGGGGCAAATATTTAGGTGTGGAGGGAGTAATAATTTAGCAATAGAATTAAAAATCAAATATTATTTAGTAGAAAAGTGACGTGATGAATATTTCAAGATAAATGCCATAGGACAACCTGGATTTGTGAAGAATCAAGATCATCATTTAGCAAATACTTGCATCAATTTTGGGAAGCCTTAATTTTTCCGTCTACCTGATTAATGATAATCTGCACACATAAGCTGTATAATTCAGTTGGAATTGTGCTGCACAAACAACTTTTTGATGTACATGTCAGAACTTACTTACTCCCTATCAGAATTCATTTCTCACAATTTTTTCCCGCTTTTGTGAAGGTTTGGTGGGAGGCAGATACACGCTGTTGAAGATGACGGTTCTGTCAATCATGCTGCGCTCCGGGACTATGATGATGAAGGAGAACGACTCAAGAAATTTGCTGCAGAACTTGAAGCTGAATGAGCCAAATAATATGATTTATGACCAACTTGTTTAGAGAAGGATGCGAAAATCTGCAATTACAAATCTAGACTTCTAGTTAATGTAATTAGTTTGTCATGAAAATTTGTAACCACTGGATAGGATTTGAAGTGCTATGGAAATGGTAGCTTAGATGTACATACTGGAAGGAAGTTGAAATTTTTGTACTTTTGGCTAGATTAATACCTTGACAGTTGACCTAAGATATATTCATATGCAGATTTCCCAATAATGTTAACATCTGACAAGATTTGTATAACAAAGTATGTAGAGTGTGCTCATTCAGTCATTCCTCTTTAGTTCCCCGAGCTGAGGCAGATTTCCTTGTAGCCTGTAACCAGGACCAAACCAGCTACTGCTGTTTTCCTCTGCATTTGAACAACAACAACAACAACAAAGCTTTAGTCCCAAAATGATTTGGGGTCGGCTAAAATCGTCATAGGAGATCGTCAATGTGACCAGAACAAACCAGAAATGATGGTTTTATTTATGAGGTAACACATAGTTGCTTGTGGCATACTCCATCTTAAACTCAAGGATATAGCTTGGTTTGATGTATTTTTTTCGGGGTTTTCTTTGTTTTATTCACTTTCCGTTTTGAAATCTTGGCATTGTGCCATCGTGGTTGGGGAATTGACAATAAGGGATTAAGGGCTGACAAATCG

mRNA sequence

CATTGCATGTTCTCCAATCAAGTCTATGTCGAGGTTTCCAGAATGAAAGTCCTTGCAAATTAATCAAACAGAGAAAACAGCACTGCAAATTAGGCTAAAACCCACTTTCAATTTCAACCCTTTTTCGTGTTCATCTTCTTCGTCTCGAACAACAATGTCGTCGGTTGAAAATCCGAGCTTACAGCAACCCCCACAATCTCCAACACACGAACAACTTCTCGTTGGGACAGCTGGGCCAACGAGTCAACATTTACCAGAAAATTCTCTAGTGGGATGGTATATAATCGATCCAACCCAGCAGCAGATTGGCCCGTACACAATTGCTGAATTGAAGGAGCATTTCCTAAACGGATACCTGACAGAGAGTACCTTTGTATGGGCTCAAGGAAGACCTGATTGGCAGCCTCTTTCATCTGTTCCCGAGTTGATGACTGGCGTACACTGTCATGCAACTGAACTTTCAGCTTCAGTACCTGCTATCAAAGATGAAGAGTTCGAGAAATGGCAAAAGGAAGTGAAAGAGGCTGAGGCTGAAGCTGAAGCTGCGATGCTAAATAATGGTTCTGCTTCAGGTGATGTAGATGGAGTTGAGCAAGAGAGACCCTCAACTCCACCTGACGGGGAGGAAGAATTTACCGATGATGATGGAACTACTTACAAGTGGGATCGCAGTCTTAGAGCATGGGTTCCTCAGGAGAACCAAGCAGATGAAGAAGAGGGATACAGATTGGAAGAGATGACATTTGTCGAACAAGAGGAAGTTTTTCCTGTACTAACTGTAGATGACACTCTTGCAAATAAAGAAGACACTACTGATGCTGGGGCAGTAGAAGAAAAGGATACAAAACAACGTGCGAAGAGAAAAGAGCCAGAACCAAAGACTGAGAAAAAGGAAGCAAATAAACCGCCAGACAGTTGGTTCGAGTTGAAGCAGAACACGCATGTTTATGTGACTGGATTGCCAGATGATGTTACAATCGAGGAAGTGGTGGAGGTTTTCTCCAAGTGTGGCATAATAAAGGAGGATCCTGAGAGTAAAAAGCCCCGTGTGAAACTATACTTCGACAAGGAGACTGGAAGAAAGAAGGGGGATGCACTTGTTACATATCTAAAGGAGCCATCAGTAGCCTTGGCGACACAACTATTAGATGGGGCATCTTTCCGGCCTGGAGAGAAGATAACTATGTCTGTAACCCCTGCGAAGTTTGAGCAGAAAGGGGAGAGATTTATTCCCAAACAGACGGATAAAAAGAAGAAAAACAAACTAAAAAGGGTTGAAGAGAAGATGCTTGGTTGGGGTGGTCGTGATGATTCAAAACTTATGATCCCGGCTACGGTTATCCTGAGCAACATGTTTACAACTGCGGAAATGAGAGAAGAGTTAAGTTTACGTGATGAATTGGAGGTAGATGTCCGTGAGGAATGTGGAAAGCTTGGTCCAGTGGATTTCATCAAGGTCTGTGAGAACAACCCGCACGGAGTTGTGCTAGTCAGGTACAAGGACAGAACCGATGCTAAAAAGTGTATAGACTTGATGGATGGAAGGTGGTTTGGTGGGAGGCAGATACACGCTGTTGAAGATGACGGTTCTGTCAATCATGCTGCGCTCCGGGACTATGATGATGAAGGAGAACGACTCAAGAAATTTGCTGCAGAACTTGAAGCTGAATGAGCCAAATAATATGATTTATGACCAACTTGTTTAGAGAAGGATGCGAAAATCTGCAATTACAAATCTAGACTTCTAGTTAATGTAATTAGTTTGTCATGAAAATTTGTAACCACTGGATAGGATTTGAAGTGCTATGGAAATGGTAGCTTAGATGTACATACTGGAAGGAAGTTGAAATTTTTGTACTTTTGGCTAGATTAATACCTTGACAGTTGACCTAAGATATATTCATATGCAGATTTCCCAATAATGTTAACATCTGACAAGATTTGTATAACAAAGTATGTAGAGTGTGCTCATTCAGTCATTCCTCTTTAGTTCCCCGAGCTGAGGCAGATTTCCTTGTAGCCTGTAACCAGGACCAAACCAGCTACTGCTGTTTTCCTCTGCATTTGAACAACAACAACAACAACAAAGCTTTAGTCCCAAAATGATTTGGGGTCGGCTAAAATCGTCATAGGAGATCGTCAATGTGACCAGAACAAACCAGAAATGATGGTTTTATTTATGAGGTAACACATAGTTGCTTGTGGCATACTCCATCTTAAACTCAAGGATATAGCTTGGTTTGATGTATTTTTTTCGGGGTTTTCTTTGTTTTATTCACTTTCCGTTTTGAAATCTTGGCATTGTGCCATCGTGGTTGGGGAATTGACAATAAGGGATTAAGGGCTGACAAATCG

Coding sequence (CDS)

ATGTCGTCGGTTGAAAATCCGAGCTTACAGCAACCCCCACAATCTCCAACACACGAACAACTTCTCGTTGGGACAGCTGGGCCAACGAGTCAACATTTACCAGAAAATTCTCTAGTGGGATGGTATATAATCGATCCAACCCAGCAGCAGATTGGCCCGTACACAATTGCTGAATTGAAGGAGCATTTCCTAAACGGATACCTGACAGAGAGTACCTTTGTATGGGCTCAAGGAAGACCTGATTGGCAGCCTCTTTCATCTGTTCCCGAGTTGATGACTGGCGTACACTGTCATGCAACTGAACTTTCAGCTTCAGTACCTGCTATCAAAGATGAAGAGTTCGAGAAATGGCAAAAGGAAGTGAAAGAGGCTGAGGCTGAAGCTGAAGCTGCGATGCTAAATAATGGTTCTGCTTCAGGTGATGTAGATGGAGTTGAGCAAGAGAGACCCTCAACTCCACCTGACGGGGAGGAAGAATTTACCGATGATGATGGAACTACTTACAAGTGGGATCGCAGTCTTAGAGCATGGGTTCCTCAGGAGAACCAAGCAGATGAAGAAGAGGGATACAGATTGGAAGAGATGACATTTGTCGAACAAGAGGAAGTTTTTCCTGTACTAACTGTAGATGACACTCTTGCAAATAAAGAAGACACTACTGATGCTGGGGCAGTAGAAGAAAAGGATACAAAACAACGTGCGAAGAGAAAAGAGCCAGAACCAAAGACTGAGAAAAAGGAAGCAAATAAACCGCCAGACAGTTGGTTCGAGTTGAAGCAGAACACGCATGTTTATGTGACTGGATTGCCAGATGATGTTACAATCGAGGAAGTGGTGGAGGTTTTCTCCAAGTGTGGCATAATAAAGGAGGATCCTGAGAGTAAAAAGCCCCGTGTGAAACTATACTTCGACAAGGAGACTGGAAGAAAGAAGGGGGATGCACTTGTTACATATCTAAAGGAGCCATCAGTAGCCTTGGCGACACAACTATTAGATGGGGCATCTTTCCGGCCTGGAGAGAAGATAACTATGTCTGTAACCCCTGCGAAGTTTGAGCAGAAAGGGGAGAGATTTATTCCCAAACAGACGGATAAAAAGAAGAAAAACAAACTAAAAAGGGTTGAAGAGAAGATGCTTGGTTGGGGTGGTCGTGATGATTCAAAACTTATGATCCCGGCTACGGTTATCCTGAGCAACATGTTTACAACTGCGGAAATGAGAGAAGAGTTAAGTTTACGTGATGAATTGGAGGTAGATGTCCGTGAGGAATGTGGAAAGCTTGGTCCAGTGGATTTCATCAAGGTCTGTGAGAACAACCCGCACGGAGTTGTGCTAGTCAGGTACAAGGACAGAACCGATGCTAAAAAGTGTATAGACTTGATGGATGGAAGGTGGTTTGGTGGGAGGCAGATACACGCTGTTGAAGATGACGGTTCTGTCAATCATGCTGCGCTCCGGGACTATGATGATGAAGGAGAACGACTCAAGAAATTTGCTGCAGAACTTGAAGCTGAATGA

Protein sequence

MSSVENPSLQQPPQSPTHEQLLVGTAGPTSQHLPENSLVGWYIIDPTQQQIGPYTIAELKEHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQKEVKEAEAEAEAAMLNNGSASGDVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPEPKTEKKEANKPPDSWFELKQNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKKPRVKLYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIPKQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDELEVDVREECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSVNHAALRDYDDEGERLKKFAAELEAE

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo12060.1	Spo12060.1	mRNA

Homology

[Close]

BLAST of Spo12060.1 vs. NCBI nr
Match: gi|902208543|gb|KNA15975.1| (hypothetical protein SOVF_093470 [Spinacia oleracea])

HSP 1 Score: 1001.9 bits (2589), Expect = 4.000e-289
Identity = 503/505 (99.60%), Postives = 504/505 (99.80%), Query Frame = 1


		  
Query: 1   MSSVENPSLQQPPQSPTHEQLLVGTAGPTSQHLPENSLVGWYIIDPTQQQIGPYTIAELK 60
           MSS ENPSLQQPPQSPTHEQLLVGTAGPTSQHLPENSLVGWYIIDPTQQQIGPYTIAELK
Sbjct: 1   MSSDENPSLQQPPQSPTHEQLLVGTAGPTSQHLPENSLVGWYIIDPTQQQIGPYTIAELK 60

Query: 61  EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQKE 120
           EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQKE
Sbjct: 61  EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQKE 120

Query: 121 VKEAEAEAEAAMLNNGSASGDVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQ 180
           VKEAEAEAEAAMLNNGSASGDVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQ
Sbjct: 121 VKEAEAEAEAAMLNNGSASGDVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQ 180

Query: 181 ENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPE 240
           ENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPE
Sbjct: 181 ENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPE 240

Query: 241 PKTEKKEANKPPDSWFELKQNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKKPRVK 300
           PKTEKKEANKPPDSWFELKQNTHVYVTGLP+DVTIEEVVEVFSKCGIIKEDPESKKPRVK
Sbjct: 241 PKTEKKEANKPPDSWFELKQNTHVYVTGLPEDVTIEEVVEVFSKCGIIKEDPESKKPRVK 300

Query: 301 LYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIP 360
           LYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIP
Sbjct: 301 LYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIP 360

Query: 361 KQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDELEVDV 420
           KQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDELEVDV
Sbjct: 361 KQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDELEVDV 420

Query: 421 REECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSV 480
           REECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSV
Sbjct: 421 REECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSV 480

Query: 481 NHAALRDYDDEGERLKKFAAELEAE 506
           NHAALRDYDDEGERLKKFAAELEAE
Sbjct: 481 NHAALRDYDDEGERLKKFAAELEAE 505

[Close]

BLAST of Spo12060.1 vs. NCBI nr
Match: gi|731326133|ref|XP_010673865.1| (PREDICTED: splicing factor U2AF-associated protein 2 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 793.5 bits (2048), Expect = 2.200e-226
Identity = 406/505 (80.40%), Postives = 442/505 (87.52%), Query Frame = 1


		  
Query: 1   MSSVENPSLQQPPQSPTHEQLLVGTAGPTSQHLPENSLVGWYIIDPTQQQIGPYTIAELK 60
           MSS ++ SL Q   S   +Q   G  G  +QHLPEN+ +GWYI+D +QQQIGPYTI+EL+
Sbjct: 1   MSSADDSSLHQ---SSVDQQ---GAEGIINQHLPENAELGWYIVDASQQQIGPYTISELR 60

Query: 61  EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQKE 120
           EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVH  A+          D+EFEKWQKE
Sbjct: 61  EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHFSASN---------DDEFEKWQKE 120

Query: 121 VKEAEAEAEAAMLNNGSASGDVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQ 180
           VKEAEAEAE    +    SG+VDGV+ ERPSTPP+GEEEFTDDDGTTYKW+R LRAWVPQ
Sbjct: 121 VKEAEAEAEMLKYD----SGNVDGVDPERPSTPPEGEEEFTDDDGTTYKWNRGLRAWVPQ 180

Query: 181 ENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPE 240
           E+QADEE GY LEEMTFV+QEEVFP+LTVDDTL NKED  D G VEEKDTKQ AKRKEPE
Sbjct: 181 ESQADEE-GYGLEEMTFVKQEEVFPILTVDDTLENKEDNIDIGTVEEKDTKQSAKRKEPE 240

Query: 241 PKTEKKEANKPPDSWFELKQNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKKPRVK 300
            KTEKKEANKPPDSWFEL  NTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESK+PRVK
Sbjct: 241 NKTEKKEANKPPDSWFELVVNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKRPRVK 300

Query: 301 LYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIP 360
           LYFDKETGRKKGDALVTYLKEPSVALATQ+LDG  FR G KI M+VTPAKFEQKGE+F+P
Sbjct: 301 LYFDKETGRKKGDALVTYLKEPSVALATQILDGTPFRLGGKIPMTVTPAKFEQKGEKFVP 360

Query: 361 KQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDELEVDV 420
           KQ DK+KK KLK+VEEKMLGWGGRDDSKLMIPATV+LSNMFTTAEMRE+ SLRDELEVD+
Sbjct: 361 KQADKRKKQKLKKVEEKMLGWGGRDDSKLMIPATVVLSNMFTTAEMREDSSLRDELEVDI 420

Query: 421 REECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSV 480
           +EECGKLGPVD +KVCE+NPHGVVLVRYKDR DAK+CI +MDGRWFGG+QIHAVEDDGSV
Sbjct: 421 QEECGKLGPVDSVKVCESNPHGVVLVRYKDRKDAKECIKVMDGRWFGGKQIHAVEDDGSV 480

Query: 481 NHAALRDYDDEGERLKKFAAELEAE 506
           NHA LRDYDDEGERLKKFAAELEAE
Sbjct: 481 NHALLRDYDDEGERLKKFAAELEAE 485

[Close]

BLAST of Spo12060.1 vs. NCBI nr
Match: gi|731326135|ref|XP_010673866.1| (PREDICTED: splicing factor U2AF-associated protein 2 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 737.3 bits (1902), Expect = 1.800e-209
Identity = 374/446 (83.86%), Postives = 401/446 (89.91%), Query Frame = 1


		  
Query: 60  KEHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQK 119
           +EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVH  A+          D+EFEKWQK
Sbjct: 17  QEHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHFSASN---------DDEFEKWQK 76

Query: 120 EVKEAEAEAEAAMLNNGSASGDVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVP 179
           EVKEAEAEAE    +    SG+VDGV+ ERPSTPP+GEEEFTDDDGTTYKW+R LRAWVP
Sbjct: 77  EVKEAEAEAEMLKYD----SGNVDGVDPERPSTPPEGEEEFTDDDGTTYKWNRGLRAWVP 136

Query: 180 QENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEP 239
           QE+QAD EEGY LEEMTFV+QEEVFP+LTVDDTL NKED  D G VEEKDTKQ AKRKEP
Sbjct: 137 QESQAD-EEGYGLEEMTFVKQEEVFPILTVDDTLENKEDNIDIGTVEEKDTKQSAKRKEP 196

Query: 240 EPKTEKKEANKPPDSWFELKQNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKKPRV 299
           E KTEKKEANKPPDSWFEL  NTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESK+PRV
Sbjct: 197 ENKTEKKEANKPPDSWFELVVNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKRPRV 256

Query: 300 KLYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFI 359
           KLYFDKETGRKKGDALVTYLKEPSVALATQ+LDG  FR G KI M+VTPAKFEQKGE+F+
Sbjct: 257 KLYFDKETGRKKGDALVTYLKEPSVALATQILDGTPFRLGGKIPMTVTPAKFEQKGEKFV 316

Query: 360 PKQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDELEVD 419
           PKQ DK+KK KLK+VEEKMLGWGGRDDSKLMIPATV+LSNMFTTAEMRE+ SLRDELEVD
Sbjct: 317 PKQADKRKKQKLKKVEEKMLGWGGRDDSKLMIPATVVLSNMFTTAEMREDSSLRDELEVD 376

Query: 420 VREECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGS 479
           ++EECGKLGPVD +KVCE+NPHGVVLVRYKDR DAK+CI +MDGRWFGG+QIHAVEDDGS
Sbjct: 377 IQEECGKLGPVDSVKVCESNPHGVVLVRYKDRKDAKECIKVMDGRWFGGKQIHAVEDDGS 436

Query: 480 VNHAALRDYDDEGERLKKFAAELEAE 506
           VNHA LRDYDDEGERLKKFAAELEAE
Sbjct: 437 VNHALLRDYDDEGERLKKFAAELEAE 448

[Close]

BLAST of Spo12060.1 vs. NCBI nr
Match: gi|731326137|ref|XP_010673867.1| (PREDICTED: splicing factor U2AF-associated protein 2 isoform X3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 667.9 bits (1722), Expect = 1.400e-188
Identity = 343/414 (82.85%), Postives = 369/414 (89.13%), Query Frame = 1


		  
Query: 92  MTGVHCHATELSASVPAIKDEEFEKWQKEVKEAEAEAEAAMLNNGSASGDVDGVEQERPS 151
           MTGVH  A+          D+EFEKWQKEVKEAEAEAE    +    SG+VDGV+ ERPS
Sbjct: 1   MTGVHFSASN---------DDEFEKWQKEVKEAEAEAEMLKYD----SGNVDGVDPERPS 60

Query: 152 TPPDGEEEFTDDDGTTYKWDRSLRAWVPQENQADEEEGYRLEEMTFVEQEEVFPVLTVDD 211
           TPP+GEEEFTDDDGTTYKW+R LRAWVPQE+QADEE GY LEEMTFV+QEEVFP+LTVDD
Sbjct: 61  TPPEGEEEFTDDDGTTYKWNRGLRAWVPQESQADEE-GYGLEEMTFVKQEEVFPILTVDD 120

Query: 212 TLANKEDTTDAGAVEEKDTKQRAKRKEPEPKTEKKEANKPPDSWFELKQNTHVYVTGLPD 271
           TL NKED  D G VEEKDTKQ AKRKEPE KTEKKEANKPPDSWFEL  NTHVYVTGLPD
Sbjct: 121 TLENKEDNIDIGTVEEKDTKQSAKRKEPENKTEKKEANKPPDSWFELVVNTHVYVTGLPD 180

Query: 272 DVTIEEVVEVFSKCGIIKEDPESKKPRVKLYFDKETGRKKGDALVTYLKEPSVALATQLL 331
           DVTIEEVVEVFSKCGIIKEDPESK+PRVKLYFDKETGRKKGDALVTYLKEPSVALATQ+L
Sbjct: 181 DVTIEEVVEVFSKCGIIKEDPESKRPRVKLYFDKETGRKKGDALVTYLKEPSVALATQIL 240

Query: 332 DGASFRPGEKITMSVTPAKFEQKGERFIPKQTDKKKKNKLKRVEEKMLGWGGRDDSKLMI 391
           DG  FR G KI M+VTPAKFEQKGE+F+PKQ DK+KK KLK+VEEKMLGWGGRDDSKLMI
Sbjct: 241 DGTPFRLGGKIPMTVTPAKFEQKGEKFVPKQADKRKKQKLKKVEEKMLGWGGRDDSKLMI 300

Query: 392 PATVILSNMFTTAEMREELSLRDELEVDVREECGKLGPVDFIKVCENNPHGVVLVRYKDR 451
           PATV+LSNMFTTAEMRE+ SLRDELEVD++EECGKLGPVD +KVCE+NPHGVVLVRYKDR
Sbjct: 301 PATVVLSNMFTTAEMREDSSLRDELEVDIQEECGKLGPVDSVKVCESNPHGVVLVRYKDR 360

Query: 452 TDAKKCIDLMDGRWFGGRQIHAVEDDGSVNHAALRDYDDEGERLKKFAAELEAE 506
            DAK+CI +MDGRWFGG+QIHAVEDDGSVNHA LRDYDDEGERLKKFAAELEAE
Sbjct: 361 KDAKECIKVMDGRWFGGKQIHAVEDDGSVNHALLRDYDDEGERLKKFAAELEAE 400

[Close]

BLAST of Spo12060.1 vs. NCBI nr
Match: gi|568836436|ref|XP_006472250.1| (PREDICTED: splicing factor U2AF-associated protein 2 [Citrus sinensis])

HSP 1 Score: 615.1 bits (1585), Expect = 1.100e-172
Identity = 322/510 (63.14%), Postives = 375/510 (73.53%), Query Frame = 1


		  
Query: 40  GWYIIDPTQQQIGPYTIAELKEHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHA 99
           GWYI+D  QQ +GPY I+EL EHFLNGYL E+T VW+QGR +WQPLSS+P+ ++G+    
Sbjct: 25  GWYILDENQQHVGPYAISELCEHFLNGYLLETTLVWSQGRSEWQPLSSIPQFLSGISQQV 84

Query: 100 TELSASVPAIK-------------------------------DEEFEKWQKEVKEAEAEA 159
              S +VP                                  D+EFEKWQ+EV+EAE EA
Sbjct: 85  ARGSTAVPCNDGIEEVREQIEEAAGMQSQSFSSAEQGVPSHVDDEFEKWQREVREAEIEA 144

Query: 160 EAAMLNNGSASGDVDGV----EQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQENQA 219
           E   L NGSAS  V G     + +     P+GE+EFTDDDGT YKWDR LRAWVPQE+ +
Sbjct: 145 E--RLKNGSASDSVGGYMGGDDHDGVPASPEGEDEFTDDDGTRYKWDRGLRAWVPQEDTS 204

Query: 220 DEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKE-DTTDAGAVEEK--------DTKQRAK 279
            + +GY +EEMTF+++EEVFP   V D LAN E       + EEK        + K   K
Sbjct: 205 SQNDGYGIEEMTFLKEEEVFPTGNVTDDLANDEVGKEKLNSTEEKVNSADNVVEEKHNGK 264

Query: 280 RKEPEPKTEKKEANKPPDSWFELKQNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESK 339
           RK+P+ + EKKEANKPPDSWFELK NTHVYVTGLPDDVT+EE+VEVFSKCGIIKEDPE+K
Sbjct: 265 RKQPDKQVEKKEANKPPDSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETK 324

Query: 340 KPRVKLYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKG 399
           KPR+K+Y DKETG KKGDALVTYLKEPSVALATQLLDG  FRPG KI MSVT AKFEQKG
Sbjct: 325 KPRIKIYVDKETGMKKGDALVTYLKEPSVALATQLLDGTPFRPGGKIPMSVTQAKFEQKG 384

Query: 400 ERFIPKQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDE 459
           ERFI KQ D KKK KLK+VEEKMLGWGGRDD+KL IPATVIL  MFT AEMR + +LR E
Sbjct: 385 ERFIAKQVDSKKKKKLKKVEEKMLGWGGRDDAKLTIPATVILRFMFTPAEMRADENLRSE 444

Query: 460 LEVDVREECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVE 506
           LE DV+EEC K+GPVD +KVCEN+P GVVLVR+KDR DA+KCI+LM+GRWFGGRQIHA E
Sbjct: 445 LEADVQEECVKIGPVDSVKVCENHPQGVVLVRFKDRKDAQKCIELMNGRWFGGRQIHASE 504

[Close]

BLAST of Spo12060.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R906_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_093470 PE=4 SV=1)

HSP 1 Score: 1001.9 bits (2589), Expect = 2.800e-289
Identity = 503/505 (99.60%), Postives = 504/505 (99.80%), Query Frame = 1


		  
Query: 1   MSSVENPSLQQPPQSPTHEQLLVGTAGPTSQHLPENSLVGWYIIDPTQQQIGPYTIAELK 60
           MSS ENPSLQQPPQSPTHEQLLVGTAGPTSQHLPENSLVGWYIIDPTQQQIGPYTIAELK
Sbjct: 1   MSSDENPSLQQPPQSPTHEQLLVGTAGPTSQHLPENSLVGWYIIDPTQQQIGPYTIAELK 60

Query: 61  EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQKE 120
           EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQKE
Sbjct: 61  EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQKE 120

Query: 121 VKEAEAEAEAAMLNNGSASGDVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQ 180
           VKEAEAEAEAAMLNNGSASGDVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQ
Sbjct: 121 VKEAEAEAEAAMLNNGSASGDVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQ 180

Query: 181 ENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPE 240
           ENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPE
Sbjct: 181 ENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPE 240

Query: 241 PKTEKKEANKPPDSWFELKQNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKKPRVK 300
           PKTEKKEANKPPDSWFELKQNTHVYVTGLP+DVTIEEVVEVFSKCGIIKEDPESKKPRVK
Sbjct: 241 PKTEKKEANKPPDSWFELKQNTHVYVTGLPEDVTIEEVVEVFSKCGIIKEDPESKKPRVK 300

Query: 301 LYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIP 360
           LYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIP
Sbjct: 301 LYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIP 360

Query: 361 KQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDELEVDV 420
           KQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDELEVDV
Sbjct: 361 KQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDELEVDV 420

Query: 421 REECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSV 480
           REECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSV
Sbjct: 421 REECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSV 480

Query: 481 NHAALRDYDDEGERLKKFAAELEAE 506
           NHAALRDYDDEGERLKKFAAELEAE
Sbjct: 481 NHAALRDYDDEGERLKKFAAELEAE 505

[Close]

BLAST of Spo12060.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CRU7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g074650 PE=4 SV=1)

HSP 1 Score: 793.5 bits (2048), Expect = 1.500e-226
Identity = 406/505 (80.40%), Postives = 442/505 (87.52%), Query Frame = 1


		  
Query: 1   MSSVENPSLQQPPQSPTHEQLLVGTAGPTSQHLPENSLVGWYIIDPTQQQIGPYTIAELK 60
           MSS ++ SL Q   S   +Q   G  G  +QHLPEN+ +GWYI+D +QQQIGPYTI+EL+
Sbjct: 1   MSSADDSSLHQ---SSVDQQ---GAEGIINQHLPENAELGWYIVDASQQQIGPYTISELR 60

Query: 61  EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQKE 120
           EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVH  A+          D+EFEKWQKE
Sbjct: 61  EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHFSASN---------DDEFEKWQKE 120

Query: 121 VKEAEAEAEAAMLNNGSASGDVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQ 180
           VKEAEAEAE    +    SG+VDGV+ ERPSTPP+GEEEFTDDDGTTYKW+R LRAWVPQ
Sbjct: 121 VKEAEAEAEMLKYD----SGNVDGVDPERPSTPPEGEEEFTDDDGTTYKWNRGLRAWVPQ 180

Query: 181 ENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPE 240
           E+QADEE GY LEEMTFV+QEEVFP+LTVDDTL NKED  D G VEEKDTKQ AKRKEPE
Sbjct: 181 ESQADEE-GYGLEEMTFVKQEEVFPILTVDDTLENKEDNIDIGTVEEKDTKQSAKRKEPE 240

Query: 241 PKTEKKEANKPPDSWFELKQNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKKPRVK 300
            KTEKKEANKPPDSWFEL  NTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESK+PRVK
Sbjct: 241 NKTEKKEANKPPDSWFELVVNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKRPRVK 300

Query: 301 LYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIP 360
           LYFDKETGRKKGDALVTYLKEPSVALATQ+LDG  FR G KI M+VTPAKFEQKGE+F+P
Sbjct: 301 LYFDKETGRKKGDALVTYLKEPSVALATQILDGTPFRLGGKIPMTVTPAKFEQKGEKFVP 360

Query: 361 KQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDELEVDV 420
           KQ DK+KK KLK+VEEKMLGWGGRDDSKLMIPATV+LSNMFTTAEMRE+ SLRDELEVD+
Sbjct: 361 KQADKRKKQKLKKVEEKMLGWGGRDDSKLMIPATVVLSNMFTTAEMREDSSLRDELEVDI 420

Query: 421 REECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSV 480
           +EECGKLGPVD +KVCE+NPHGVVLVRYKDR DAK+CI +MDGRWFGG+QIHAVEDDGSV
Sbjct: 421 QEECGKLGPVDSVKVCESNPHGVVLVRYKDRKDAKECIKVMDGRWFGGKQIHAVEDDGSV 480

Query: 481 NHAALRDYDDEGERLKKFAAELEAE 506
           NHA LRDYDDEGERLKKFAAELEAE
Sbjct: 481 NHALLRDYDDEGERLKKFAAELEAE 485

[Close]

BLAST of Spo12060.1 vs. UniProtKB/TrEMBL
Match: A0A067H1I9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009565mg PE=4 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 1.300e-172
Identity = 321/510 (62.94%), Postives = 375/510 (73.53%), Query Frame = 1


		  
Query: 40  GWYIIDPTQQQIGPYTIAELKEHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHA 99
           GWYI+D  QQ +GPY I+EL EHFLNGYL E+T VW+QGR +WQPLSS+P+ ++G+    
Sbjct: 25  GWYILDENQQHVGPYAISELCEHFLNGYLLETTLVWSQGRSEWQPLSSIPQFLSGISQQV 84

Query: 100 TELSASVPAIK-------------------------------DEEFEKWQKEVKEAEAEA 159
              S +VP                                  D+EFEKWQ+EV+EAE EA
Sbjct: 85  ARGSTAVPCNDGIEEVREQIEEAAGMQSQSFSSAEQGVPSHVDDEFEKWQREVREAEIEA 144

Query: 160 EAAMLNNGSASGDVDGV----EQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQENQA 219
           E   L NGSAS  V G     + +     P+GE+EFTDDDGT YKWDR LRAWVPQE+ +
Sbjct: 145 E--RLKNGSASDSVGGYMGRDDHDGVPASPEGEDEFTDDDGTRYKWDRGLRAWVPQEDTS 204

Query: 220 DEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKE-DTTDAGAVEEK--------DTKQRAK 279
            + +GY +EEMTF+++EEVFP + V D LAN E       + EEK        + K   K
Sbjct: 205 SQNDGYGIEEMTFLKEEEVFPTVNVTDDLANDEVGKEKLNSTEEKVNSADNVVEEKHNGK 264

Query: 280 RKEPEPKTEKKEANKPPDSWFELKQNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESK 339
           RK+P+ + EKKEANKPPDSWFELK NTHVYVTGLPDDVT+EE+VEVFSKCGIIKEDPE+K
Sbjct: 265 RKQPDKQVEKKEANKPPDSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETK 324

Query: 340 KPRVKLYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKG 399
           KPR+K+Y DKETG KKGDALVTYLKEPSVALATQLLDG  FRP  KI MSVT AKFEQKG
Sbjct: 325 KPRIKIYVDKETGMKKGDALVTYLKEPSVALATQLLDGTPFRPDGKIPMSVTQAKFEQKG 384

Query: 400 ERFIPKQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDE 459
           ERFI KQ D KKK KLK+VEEKMLGWGGRDD+KL IPATVIL  MFT AEMR + +LR E
Sbjct: 385 ERFIAKQVDSKKKKKLKKVEEKMLGWGGRDDAKLTIPATVILRFMFTPAEMRADENLRSE 444

Query: 460 LEVDVREECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVE 506
           LE DV+EEC K+GPVD +KVCEN+P GVVLVR+KDR DA+KCI+LM+GRWFGGRQIHA E
Sbjct: 445 LEADVQEECVKIGPVDSVKVCENHPQGVVLVRFKDRKDAQKCIELMNGRWFGGRQIHASE 504

[Close]

BLAST of Spo12060.1 vs. UniProtKB/TrEMBL
Match: V7BDQ2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G117900g PE=4 SV=1)

HSP 1 Score: 602.4 bits (1552), Expect = 4.900e-169
Identity = 309/525 (58.86%), Postives = 386/525 (73.52%), Query Frame = 1


		  
Query: 1   MSSVENPSLQQPPQSPTHEQLLVGTAGPTSQHLPENSLVGWYIIDPTQQQIGPYTIAELK 60
           M+S       QPP  P  E++               + VGWY++   QQQ+GPY  +EL+
Sbjct: 1   MNSQNGGESHQPPPQPQGEKV---------------TEVGWYVLGEDQQQVGPYAFSELR 60

Query: 61  EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQKE 120
           EHFLNGYL+E+TFVW++GR +WQPLSSV +L T ++    + SA+V A   +EFE+W+KE
Sbjct: 61  EHFLNGYLSENTFVWSEGRSEWQPLSSVSDLWTQINRQGLDSSAAVSAHDVDEFERWEKE 120

Query: 121 VKEAEAEAEAAMLNN--GSASGDVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWV 180
           ++EAEA+ E +   +  G+  G   G + ERPSTPP+GEEEFTDDDGT YKWDR+LRAWV
Sbjct: 121 IQEAEAQVEGSDFGSFAGNVGGTAAGEDSERPSTPPEGEEEFTDDDGTVYKWDRNLRAWV 180

Query: 181 PQENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQRA---- 240
           PQE      E YR+E+MTF+++EEVFP +T  D     ED++  G V +   K+      
Sbjct: 181 PQEYPTGSTEPYRVEDMTFLQEEEVFPTITNSDASEKFEDSSKLG-VSDPSLKEEVNNAN 240

Query: 241 --------------KRKEPEPKTEKKEANKPPDSWFELKQNTHVYVTGLPDDVTIEEVVE 300
                         KRK  + +T+KKEANKPPDSWFELK NTHVYV GLP+DVT +E+VE
Sbjct: 241 KTNEANDISVVAGGKRKLSDQQTDKKEANKPPDSWFELKINTHVYVNGLPEDVTTDEIVE 300

Query: 301 VFSKCGIIKEDPESKKPRVKLYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGE 360
           VFSKCGIIKEDPE+K+PRVKLY DKETG+ KGDALVTYLKEPSVALA Q+LDGA FRPG 
Sbjct: 301 VFSKCGIIKEDPETKRPRVKLYVDKETGKNKGDALVTYLKEPSVALAIQILDGAPFRPGG 360

Query: 361 KITMSVTPAKFEQKGERFIPKQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNM 420
           KI MSV+ AKF+QKG+RF+ KQ D KKK KLKRVEEKMLGWGGRDD+K+ IPAT+IL  M
Sbjct: 361 KIPMSVSQAKFQQKGDRFVSKQVDNKKKKKLKRVEEKMLGWGGRDDAKVSIPATMILRFM 420

Query: 421 FTTAEMREELSLRDELEVDVREECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDL 480
           F+ AEMR + +LR ELE DV+EEC KLGPVD +K+CEN+P GVVLV++KDR DA+KCI+L
Sbjct: 421 FSPAEMRADENLRLELEEDVKEECTKLGPVDSVKICENHPQGVVLVKFKDRKDAQKCIEL 480

Query: 481 MDGRWFGGRQIHAVEDDGSVNHAALRDYDDEGERLKKFAAELEAE 506
           M+GRWFGGRQ+HA EDDGSVNHA +RD  ++  RL++F AELE +
Sbjct: 481 MNGRWFGGRQVHASEDDGSVNHALVRDLQEDAIRLEQFGAELEGD 509

[Close]

BLAST of Spo12060.1 vs. UniProtKB/TrEMBL
Match: A0A0S3SPZ8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G153700 PE=4 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 4.200e-168
Identity = 312/524 (59.54%), Postives = 388/524 (74.05%), Query Frame = 1


		  
Query: 1   MSSVENPSLQQPPQSPTHEQLLVGTAGPTSQHLPENSLVGWYIIDPTQQQIGPYTIAELK 60
           M+S       QPP  P  E++               + VGWY++   QQQ+GPY  +EL+
Sbjct: 1   MNSQNGGESHQPPPLPQGEKV---------------TEVGWYVLGEDQQQVGPYAFSELR 60

Query: 61  EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQKE 120
           EHFLNGYL+E+TFVW++GR +WQPLSSV +L T ++   ++ S +V A   +EFE+W+KE
Sbjct: 61  EHFLNGYLSENTFVWSEGRSEWQPLSSVSDLWTQINQQGSDFSTAVSAHDVDEFERWEKE 120

Query: 121 VKEAEAEAEAAMLNNGSASGDVD----GVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRA 180
           +KEAEA+ E +  + GS SG+V     G + ERPSTPP+GEEEFTDDDGT YKWDR+LRA
Sbjct: 121 IKEAEAQVEGS--DFGSFSGNVGSTAAGEDSERPSTPPEGEEEFTDDDGTVYKWDRNLRA 180

Query: 181 WVPQENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQR--- 240
           WVPQE      E Y +E+MTF+++EEVFP +T  D     ED+++   V +   K+    
Sbjct: 181 WVPQEYPTGSTEPYGVEDMTFLQEEEVFPTITNSDASEKIEDSSEL-VVSDPSLKEEPNE 240

Query: 241 ------------AKRKEPEPKTEKKEANKPPDSWFELKQNTHVYVTGLPDDVTIEEVVEV 300
                        KRK  + +T+KKEANKPPDSWFELK NTHVYV GLP+DVT +E+VEV
Sbjct: 241 TNETNNASVVAGGKRKLSDQQTDKKEANKPPDSWFELKINTHVYVNGLPEDVTTDEIVEV 300

Query: 301 FSKCGIIKEDPESKKPRVKLYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEK 360
           FSKCGIIKEDPE+K+PRVKLY DKETGRKKGDALVTYLKEPSVALA Q+LDGA FRPG K
Sbjct: 301 FSKCGIIKEDPETKRPRVKLYVDKETGRKKGDALVTYLKEPSVALAIQILDGAPFRPGGK 360

Query: 361 ITMSVTPAKFEQKGERFIPKQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMF 420
           I MSV+ AKFEQKG++F+ +Q D KKK KLKRVEEKMLGWGGRDD+K+ IPATVIL  MF
Sbjct: 361 IPMSVSQAKFEQKGDKFVSRQVDNKKKKKLKRVEEKMLGWGGRDDAKVSIPATVILRFMF 420

Query: 421 TTAEMREELSLRDELEVDVREECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLM 480
           + AEMR + +LR ELE DV+EEC KLGPVD +K+CEN+P GVVLV++KDR DA+KCI+LM
Sbjct: 421 SPAEMRADENLRLELEEDVKEECTKLGPVDSVKICENHPQGVVLVKFKDRKDAQKCIELM 480

Query: 481 DGRWFGGRQIHAVEDDGSVNHAALRDYDDEGERLKKFAAELEAE 506
           +GRWFGGR IHA EDDGSVNHA +RD  ++  RL++F AELE +
Sbjct: 481 NGRWFGGRLIHASEDDGSVNHALVRDLQEDAIRLEQFGAELEGD 506

[Close]

BLAST of Spo12060.1 vs. ExPASy Swiss-Prot
Match: HTSF1_MOUSE (HIV Tat-specific factor 1 homolog OS=Mus musculus GN=Htatsf1 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 9.000e-39
Identity = 124/368 (33.70%), Postives = 193/368 (52.45%), Query Frame = 1


		  
Query: 143 DGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQENQADEEEGYRLEEMTFVEQEE 202
           +G  Q  PS       +  DD  T Y+WD   +AW P+  +         + +   +   
Sbjct: 28  EGDTQNEPSGEAHSLGQPPDD--TPYEWDLDKKAWFPKITE---------DFIATYQANY 87

Query: 203 VFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPEPKTEKKEANKPPDSWFELKQ-- 262
            F       + AN +D  +  AVEE   K+  +  + + K EK++A      WF +++  
Sbjct: 88  GFSSDGASSSTANVQDA-NTKAVEEPPQKEVPETPDSKRKGEKRKAES---GWFHVEEDR 147

Query: 263 NTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKKPRVKLYFDKETGRKKGDALVTYLK 322
           NT+VYV+GLP D+T++E +++ SK GII  DP++++ +VKLY D + G  KGD L  YLK
Sbjct: 148 NTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKD-DQGNLKGDGLCCYLK 207

Query: 323 EPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIPKQTDKKKKNKLK-RVEEKML 382
           + SV LA +LLD    R G K+ + V  AKF+ KGE    K+  K K  K K  +++K L
Sbjct: 208 KESVELALKLLDEDEIR-GYKLHVEV--AKFQLKGEYDASKKKKKCKDYKKKLSLQQKQL 267

Query: 383 GWGGR---DDSKLMIPATVILSNMFTTAEMREELSLRDELEVDVREECGKLGPVDFIKVC 442
            W        ++L     VIL NMF   +  ++  + +E+  D+R EC K G +  + + 
Sbjct: 268 DWRPERRAGPNRLRHERVVILKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLF 327

Query: 443 ENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSVNHAALRDYDDEGERLK 502
           + +P GV  V +++  +A  CI  +DGRWFGGRQI A   DG+ ++       +  ERL+
Sbjct: 328 DRHPDGVASVSFREPEEADHCIQTLDGRWFGGRQITAQAWDGTTDYQVEETSREREERLR 376

Query: 503 KFAAELEA 505
            + A L A
Sbjct: 388 GWEAFLNA 376

[Close]

BLAST of Spo12060.1 vs. ExPASy Swiss-Prot
Match: HTSF1_PONAB (HIV Tat-specific factor 1 homolog OS=Pongo abelii GN=HTATSF1 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.200e-38
Identity = 124/370 (33.51%), Postives = 188/370 (50.81%), Query Frame = 1


		  
Query: 143 DGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQENQADEEEGYRLEEMTFVEQEE 202
           DG  Q      PD   +   D  T Y+WD   +AW P+  +         + +   +   
Sbjct: 27  DGDTQTDAGGEPDSLGQQPTD--TPYEWDLDKKAWFPKITE---------DFIATYQANY 86

Query: 203 VFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPEPKTEKK--EANKPPDSWFELKQ 262
            F       + AN ED      V  +  ++  + K PEP   +K  E  K    WF +++
Sbjct: 87  GFSNDGASSSTANVED------VHARTAEEPPQEKAPEPTDPRKKGEKRKAESGWFHVEE 146

Query: 263 --NTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKKPRVKLYFDKETGRKKGDALVTY 322
             NT+VYV+GLP D+T++E +++ SK GII  DP++++ +VKLY D + G  KGD L  Y
Sbjct: 147 DRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQ-GNLKGDGLCCY 206

Query: 323 LKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIPKQTDKKKKNKLK-RVEEK 382
           LK  SV LA +LLD    R G K+ + V  AKF+ KGE    K+  K K  K K  +++K
Sbjct: 207 LKRESVELALKLLDEDEIR-GYKLHVEV--AKFQLKGEYDASKKKKKCKDYKKKLSMQQK 266

Query: 383 MLGWGGR---DDSKLMIPATVILSNMFTTAEMREELSLRDELEVDVREECGKLGPVDFIK 442
            L W        S++     VI+ NMF   +  ++  + +E+  D+R EC K G +  + 
Sbjct: 267 QLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLL 326

Query: 443 VCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSVNHAALRDYDDEGER 502
           + + +P GV  V ++D  +A  CI  +DGRWFGGRQI A   DG+ ++       +  ER
Sbjct: 327 LFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEETSREREER 375

Query: 503 LKKFAAELEA 505
           L+ + A L A
Sbjct: 387 LRGWEAFLNA 375

[Close]

BLAST of Spo12060.1 vs. ExPASy Swiss-Prot
Match: HTSF1_HUMAN (HIV Tat-specific factor 1 OS=Homo sapiens GN=HTATSF1 PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.200e-38
Identity = 124/370 (33.51%), Postives = 188/370 (50.81%), Query Frame = 1


		  
Query: 143 DGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQENQADEEEGYRLEEMTFVEQEE 202
           DG  Q      PD   +   D  T Y+WD   +AW P+  +         + +   +   
Sbjct: 27  DGDTQTDAGGEPDSLGQQPTD--TPYEWDLDKKAWFPKITE---------DFIATYQANY 86

Query: 203 VFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPEPKTEKK--EANKPPDSWFELKQ 262
            F       + AN ED      V  +  ++  + K PEP   +K  E  K    WF +++
Sbjct: 87  GFSNDGASSSTANVED------VHARTAEEPPQEKAPEPTDARKKGEKRKAESGWFHVEE 146

Query: 263 --NTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKKPRVKLYFDKETGRKKGDALVTY 322
             NT+VYV+GLP D+T++E +++ SK GII  DP++++ +VKLY D + G  KGD L  Y
Sbjct: 147 DRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQ-GNLKGDGLCCY 206

Query: 323 LKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIPKQTDKKKKNKLK-RVEEK 382
           LK  SV LA +LLD    R G K+ + V  AKF+ KGE    K+  K K  K K  +++K
Sbjct: 207 LKRESVELALKLLDEDEIR-GYKLHVEV--AKFQLKGEYDASKKKKKCKDYKKKLSMQQK 266

Query: 383 MLGWGGR---DDSKLMIPATVILSNMFTTAEMREELSLRDELEVDVREECGKLGPVDFIK 442
            L W        S++     VI+ NMF   +  ++  + +E+  D+R EC K G +  + 
Sbjct: 267 QLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLL 326

Query: 443 VCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSVNHAALRDYDDEGER 502
           + + +P GV  V ++D  +A  CI  +DGRWFGGRQI A   DG+ ++       +  ER
Sbjct: 327 LFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEETSREREER 375

Query: 503 LKKFAAELEA 505
           L+ + A L A
Sbjct: 387 LRGWEAFLNA 375

[Close]

BLAST of Spo12060.1 vs. ExPASy Swiss-Prot
Match: UAP2_SCHPO (Splicing factor U2AF-associated protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=uap2 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.800e-31
Identity = 111/365 (30.41%), Postives = 173/365 (47.40%), Query Frame = 1


		  
Query: 170 WDRSLRAWVPQENQA------DEEEGYRLEEMTFVEQEEVFPV-LTVDDTLANKEDTTDA 229
           WD  +  W    ++       DEE+ ++  +   ++  +       V D  A   +  ++
Sbjct: 7   WDERIHRWRCLGSEGNELIYIDEEQTWKDYDPNSLKMNKAGSTGAEVSDVTAEATEGKES 66

Query: 230 GAVEEKDTKQRAKRKEPE----------PKTEKKEANKPPDSWFELKQNTHVYVTGLPDD 289
              E++ TK+  +    E           K+E  EA+  P        N  VY+ GLP D
Sbjct: 67  SNGEDRHTKRLYESTSAEGYPSGSRNKKSKSENSEASPAPVI------NKAVYIQGLPLD 126

Query: 290 VTIEEVVEVFSKCGIIKEDPESKKPRVKLYFDKETGRKKGDALVTYLKEPSVALATQLLD 349
           VT++E+ EVF KCG+I ++ ++  PR+K+Y   E G  KGDAL+ + +  SV LA QL D
Sbjct: 127 VTVDEIEEVFKKCGVIAKNIDNGTPRIKIY-RTEDGTPKGDALIVFFRSESVELAEQLFD 186

Query: 350 GASFRPGEKITMSVTPAKFEQKGERFIPKQTDKKKKNKLKRVEEKML----GWGGRDDS- 409
              FR G    M V  A  + K E+ + K      K K  R+ ++ +     W   D+  
Sbjct: 187 DTEFRYGSGQKMRVQKANIDYKKEKTVNKDVGGALKKKALRLRQQQMQQISSWDDVDEEV 246

Query: 410 ----KLMIPATVILSNMFTTAEMREELSLRDELEVDVREECGKLGPVDFIKVCENNPHGV 469
               K      V+L ++FT  E+ +   L  +L+ D+ EE  K G V  + + +  P GV
Sbjct: 247 DDKRKKRFNKIVVLKHIFTLEELDKTPELLIDLKDDITEEAEKCGRVTNVVLYDKEPDGV 306

Query: 470 VLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSVNHA-----ALRDYDDEGERLKKF 504
           V VR+ +  +A+ C+ LM GR+F GR + A   DG V         L D +DE +RL+KF
Sbjct: 307 VTVRFSNNEEAEACVRLMQGRYFDGRVVEASIYDGKVRFQKSGKHTLDDEEDEEKRLEKF 364

[Close]

BLAST of Spo12060.1 vs. ExPASy Swiss-Prot
Match: CUS2_YEAST (Cold sensitive U2 snRNA suppressor 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CUS2 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 5.100e-18
Identity = 91/287 (31.71%), Postives = 153/287 (53.31%), Query Frame = 1


		  
Query: 221 DAGAVEEKDTKQRAKRKEPEPKTEKKEAN--KPPDSWFELKQNTHVYVTGLPDDVTIEE- 280
           DA  +E K   ++ K++E   + + KE+N  K    +    +NT +Y++GLP D T +E 
Sbjct: 2   DADELELKGHLKKLKKEELLRRKQLKESNLQKRELEYNNASKNTSIYISGLPTDKTTKEG 61

Query: 281 VVEVFSKCGIIKEDPESKKPRVKLYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFR 340
           + E F K G+I+ + + + P  KLY + + G  KGDAL+TY KE SV LA ++++ + F 
Sbjct: 62  LTEQFCKYGMIRTNRDGE-PLCKLYVN-DKGAFKGDALITYSKEESVTLAIEMMNESIFL 121

Query: 341 PGEKITMSVTPAKFEQK-GERFIPKQTDKKKKN----KLKRVEE-KMLGWG-----GRDD 400
            G++I   V  A+F+ K G+    K+ D K+ N     +KR+++ K  G G       D+
Sbjct: 122 -GKQI--RVERAQFQNKEGDNMHGKENDLKEFNGPEPPIKRLKKAKSEGEGEVIDYNDDE 181

Query: 401 SKLMIPATVILSNMFTTAEMREELSLRDELEVDVREECGKLGPVDFIKVCENNPHGVVLV 460
           S      TVI +N+F   +      + D ++ D+ E C ++G VD I V  N   G   V
Sbjct: 182 SLAKADRTVIFANVFNIYKSYTNDDIND-IQEDLLEGCEEIGQVDSISVSPNK--GEATV 241

Query: 461 RYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSVNHAALRDYDDEGE 494
            +K+   A +C  +M GR+F G+++ A    G  N ++  D +++ E
Sbjct: 242 VFKNNKVALQCCKIMTGRYFDGQKLLAF-ISGDENTSSTSDKNEDSE 279

[Close]

BLAST of Spo12060.1 vs. TAIR (Arabidopsis)
Match: AT5G16260.1 (RNA binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 539.7 bits (1389), Expect = 2.000e-153
Identity = 287/500 (57.40%), Postives = 358/500 (71.60%), Query Frame = 1


		  
Query: 39  VGWYIIDPTQQQIGPYTIAELKEHFLNGYLTESTFVWAQGRPDWQPLSSVPELMT----- 98
           VGWYI+   QQ +GPYT +EL  HF NGYL E+T VWA GR +WQPLS++P+LM+     
Sbjct: 23  VGWYILGENQQNLGPYTFSELCNHFRNGYLLETTLVWADGRSEWQPLSAIPDLMSRISGA 82

Query: 99  ------------------GVHCHATELSASVPAIKDEEFEKWQKEVKEAEAEAEAAMLNN 158
                             G      + +AS  A  ++EFEKWQ+E+K+AEAEAE   L N
Sbjct: 83  EIAYPAVGSSGLINGSNAGTRQEKQDYTAS--ASTEDEFEKWQREIKDAEAEAE--RLKN 142

Query: 159 GSASG-DVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQEN-QADEEEGYRLE 218
           GS SG ++   + ER S+PP+GE+EFTDDDGT YKWDR+ R WVPQ++      + Y LE
Sbjct: 143 GSVSGTELVEDDHERASSPPEGEDEFTDDDGTKYKWDRARRVWVPQDDPPLGSVDPYGLE 202

Query: 219 EMTFVEQEEVFPVLTVDDTLANKEDTT---------DAGAVEEKDTKQRAKRKEPEPKTE 278
           EMTF +++EVFP + + DT  +K+D +         + G+ E  +     KRK PEP+TE
Sbjct: 203 EMTFAKEDEVFPTINILDTSVDKKDASKDDVAGKKEEDGSDETAEINSNGKRKLPEPETE 262

Query: 279 KKEANKPPDSWFELKQNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKKPRVKLYFD 338
           KKE NKPPDSWFELK N H+YV GLPDDVTIEEV EVFSKCGIIKED ++ KPR+KLY D
Sbjct: 263 KKEPNKPPDSWFELKVNPHIYVNGLPDDVTIEEVAEVFSKCGIIKED-DTGKPRIKLYSD 322

Query: 339 KETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIPKQTD 398
           K TG+ KGDAL++Y+KEPSV LA ++LDGA  RP +K+ MSV+ AKFEQKGERFI KQTD
Sbjct: 323 KATGKLKGDALISYMKEPSVDLAIKILDGAPLRPADKLLMSVSRAKFEQKGERFITKQTD 382

Query: 399 KKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDELEVDVREEC 458
            KKK KLK+VE+K+LGWGG DDSK+ IPATV+L  MF+ AE+  +  L  ELE DV+EE 
Sbjct: 383 NKKKKKLKKVEQKLLGWGGTDDSKVSIPATVVLRYMFSPAELMADEDLVAELEEDVKEES 442

Query: 459 GKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSVNHAA 505
            K GP D +KVCE++P GVVLVR+KDR DA+KCI+ M+GRW+  RQIHA  DDGSVNHA 
Sbjct: 443 LKHGPFDSVKVCEHHPQGVVLVRFKDRRDAQKCIEAMNGRWYAKRQIHASLDDGSVNHAT 502

[Close]

BLAST of Spo12060.1 vs. TAIR (Arabidopsis)
Match: AT1G50300.1 (TBP-associated factor 15)

HSP 1 Score: 52.0 bits (123), Expect = 1.300e-6
Identity = 29/67 (43.28%), Postives = 38/67 (56.72%), Query Frame = 1


		  
Query: 261 NTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKKPRVKLYFDKETGRKKGDALVTYLK 320
           N  VYV+ LP       + + F   G++K D  +  P+V LY DKET   KGDA VTY +
Sbjct: 7   NGSVYVSNLPLGTDENMLADYFGTIGLLKRDKRTGTPKVWLYRDKETDEPKGDATVTY-E 66

Query: 321 EPSVALA 328
           +P  ALA
Sbjct: 67  DPHAALA 72

The following BLAST results are available for this feature:

BLAST of Spo12060.1 vs. NCBI nr
BLAST of Spo12060.1 vs. UniProtKB/TrEMBL
BLAST of Spo12060.1 vs. ExPASy Swiss-Prot
BLAST of Spo12060.1 vs. TAIR (Arabidopsis)

BLAST of Spo12060.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902208543\|gb\|KNA15975.1\|	4.0e-289	99.6	hypothetical protein SOVF_0934...	[more]
gi\|731326133\|ref\|XP_010673865.1\|	2.2e-226	80.4	PREDICTED: splicing factor U2A...	[more]
gi\|731326135\|ref\|XP_010673866.1\|	1.8e-209	83.8	PREDICTED: splicing factor U2A...	[more]
gi\|731326137\|ref\|XP_010673867.1\|	1.4e-188	82.8	PREDICTED: splicing factor U2A...	[more]
gi\|568836436\|ref\|XP_006472250.1\|	1.1e-172	63.1	PREDICTED: splicing factor U2A...	[more]

BLAST of Spo12060.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R906_SPIOL	2.8e-289	99.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8CRU7_BETVU	1.5e-226	80.4	Uncharacterized protein OS=Bet...	[more]
A0A067H1I9_CITSI	1.3e-172	62.9	Uncharacterized protein OS=Cit...	[more]
V7BDQ2_PHAVU	4.9e-169	58.8	Uncharacterized protein OS=Pha...	[more]
A0A0S3SPZ8_PHAAN	4.2e-168	59.5	Uncharacterized protein OS=Vig...	[more]

BLAST of Spo12060.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
HTSF1_MOUSE	9.0e-39	33.7	HIV Tat-specific factor 1 homo...	[more]
HTSF1_PONAB	1.2e-38	33.5	HIV Tat-specific factor 1 homo...	[more]
HTSF1_HUMAN	1.2e-38	33.5	HIV Tat-specific factor 1 OS=H...	[more]
UAP2_SCHPO	1.8e-31	30.4	Splicing factor U2AF-associate...	[more]
CUS2_YEAST	5.1e-18	31.7	Cold sensitive U2 snRNA suppre...	[more]

BLAST of Spo12060.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT5G16260.1	2.0e-153	57.4	RNA binding (RRM/RBD/RNP motif...	[more]
AT1G50300.1	1.3e-6	43.2	TBP-associated factor 15	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 419..472 score: 3.1E-7coord: 264..336 score: 6.
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 263..345 score: 2.8E-8coord: 394..474 score: 4.
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 393..471 score: 8.808coord: 262..349 score: 11
IPR003169	GYF domain	GENE3D	3.30.1490.40		coord: 41..88 score: 3.
IPR003169	GYF domain	unknown	SSF55277	GYF domain	coord: 29..90 score: 3.6
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	3.30.70.330		coord: 394..473 score: 2.6E-18coord: 232..342 score: 4.7
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 254..353 score: 1.48E-15coord: 413..473 score: 3.36
IPR025640	Domain of unknown function DUF4339	PFAM	PF14237	DUF4339	coord: 41..85 score: 6.5
None	No IPR available	unknown	Coil	Coil	coord: 485..505 score: -coord: 114..134 scor
None	No IPR available	PANTHER	PTHR15608	SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2	coord: 31..505 score: 1.5E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035265	organ growth
biological_process	GO:0032984	protein-containing complex disassembly
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005525	GTP binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo02396	0.67	Barchart \| Table
Spo01928	0.66	Barchart \| Table