Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTGAAATGAGTATATTGCTGGTAAATTTTCAATCACGGTTTATACTATTATTAAGATATTAGCAAGTCTTGGATTACCGAGAATGTGATTCTTCTCATTCAACTGTGCGTGTTGCTAACATAATTGATTAGAACTAAGCTCGGGGAAGATTAGGAGGTCTTTATTATAGGCCACGTTGAAGTGTTCAGCTTCAAACATTGTTACAAGGGTACTTTGGGGTGAATGAAGTTTCTGAGTAACATAGTTTGCTGGAAGCCAAAACCTAATAAGTTTCCCTTGTAATCTTTGCTCTTACATGGCGGTTGTTTGAACTTTTGTTAAAATATGCTTGTTGTTACGGAAGACGTGCTCTCTGCCTGTGATCCGGTTCACAACTTTAAGATTGGCCTAATTTATTTCTTTTTTATGTCATACGTCGTTACCAGTATTTTTCAAGGCAGTATTTACCAGTACCACGACAAATGTAGTTAAAAGACAATGACTCTTTTAAGTGAAATTGCCAAGGCAGTAATAATTATAGCCTTAGAATAGTCTTCATCCTTTTACTAGTTCTCTTCATTCTATTTGCTAATCTGCATGCTTGATACCCTTCACAGGTAGATGACATTGAGCGACTCATAGAAATCGTGAGACAAGCTGCAAAAGAAGATGCTATGCTTGTCTATACTATTGCTGAACCTTCAATGGCTGGTGCTGCAAGAAAAGCCTGCCAATTATGGGGCGTACCATGCACGGATGTCCTTGGCCCAATAACCGAGGCAATTGCTTCTCATCTTGGAGTTTCGCCTTCAGGGCTTCCCCGTGGAGCAGGAGGTAGAAATTTCTTGAGTGAAGATTACTTCCAAAGGATCGAAGCCATTGAATTTACTATAAAACAAGACGATGGGGCTCTACCTCAGAACTTACGTAAAGCTGATATTGTACTCACTGGTGTTTCTCGTACTGGAAAAACTCCTCTGTCGATTTACCTTGCACAAAAAGGATACAAAGTAGCAAACGTTCCTATCGTAATGGGTGTGGAATTACCCAAAACTTTGTTTGAGATAGATCCGGATAAAGTTTTTGCTTTGACTATTGATCCGGTTGTCTTGCAATCGATTAGAAAATCACGGGCCAAGACTCTAGGCATAGCTGAACATGAAATGCACAACTACTCACAGATGGGGTATGTGAAAAAGGATTTGGAACGTGCGAGTAAAATTTTTACTCAAAATCCCAGCTGGCCTGTAATTGGTAAGTACTCCTTCTGTCCCTAAAAGATTGTCCATACTAACTTTTTCACTTTATTAAGATAGAATGCAAAATGAAAGCATGTGGGTTAGTAGTTGTCTTTTTGCTAATTTAAATAATAGAATGTGAGAGGAAACATGTGATAACCACATACTATAAACGGTACGGGCCAAACTCGAAGGGACATACCGAAAAGGAAATTGGGGCGATCTTTTAGGGACGGAGGGGGTACTTAAGTAGGAGGTAGGCCTATTGTCCATGTGTGAATTTGCATATATCTATTTGGTGGAGTAAAATATTTGCATTGTGTTTTCTTATACATCCCACAACCAAAAGAATAAATGAGCCAAAGATTCATTTGTTCTTTTGGTTGTGGATGTAATGGACTAAATCAAAATGGCTCTTAAAACCTCTTCGCTTCCTTTCCATGAAGTAGAAGATGGTCTTCCCGTTATCGCTTTTGGGCAATTGGAAACAACTTCTCTGCAATCGCAGGGTAAGGTTGCGTACACCCGACCCCCCTTTACCCCGCTTCTTGCGGGAGCCTCTCTGAGGCAATGGGGTAATGATAATGATGATGAATGATGTGTTTTCTTATACAATAGTTGTTTCAGCATTGGTTTTTCTTTTTTTTCTTCTGACAACTCGTTTGGTGTTTGACAGAGGTGACTAGCAAAGCTATTGAAGAAACTGCAGCAATTATCTTAAGGATATACCATGACAGAAAACAGAAGCGATCATTGCCCAGTATTTCAAAGCGCTACTAGAGATGATGAATGCGCGACAGTCTGAAGTTTCTGATGACGAATACTCCGTACATCAGTAAGTTATTGAAGCTTGTACTCTTTTTGTATATATGGTTCTTAATATTGGTGTTCTTTCATTATCATACTCGTTTTCCGGTGAGTACCCTTACATGTATATGGTTGTTAAATGTTAATATCAATTTCCTGGATCACAGGACTTGGTTGTTATCGTTTCTGTATAGTCACATAACCATAAACCATCAGTGGATGTTAATATGTCTTTACTATCATTTGTGGTAATAAAGGTTTTTGGTAGGATTACAAGATTACATGAAATGTGTTATGTGTTGCTCCATATTACATTTCAATTTCTAGTTGCTCTAACCTAACTTGTAAGAAGATCTAACAATTGGCAGATGCCGAGGAAACCCCTCCGAGGTTGAAGTAATTTCAAAATTTACAATTTAATAGAGGATACTAAGGGTACATTCGTAATTGTACTACTACAATTACAAATATACCCTTAGTATCCTCTATTACAATGGAAGAGTAACAAGTAGAGAGTGTTGTGCTTGAGAGCTATCAGCTTCCGTGGTTGAAGTAATTTGAAATTTTACAATTTAATAGAGGATACTAAGTGTATAGTCGTAATTTCACTACTACAATTACGAGTATACCCTTAGTATCTTCTATTACAATTTATAGCAAGAGTAACAAGTAGAGAGTGTTGTGCTTGAGAGCTATCACCTGCTTACCTCTGAGACATAGATGATCCCCAAATCATTGTGGGGTTGCTGTAGATTTCAAATGGGCCAGTGGGGCTTTAGGACAACAATTGTCATGTATATTGGACCCCTAACTCATGGGCCAAGTAGTGGATCCGAATATGGGCAATTATTTAGGGTCTTAGGGTTGGCGAGAGAATTTTAGAGCCCAAAGGAACATCAATTTGATTATGTTAGCAGGATAACTGGAGTCCATTTCCGATTTAGCTAAAGATTCATTTGTTATTTTGGTTGTGGATGTAATGGACTAAATTGAAATGGCTCTTAAAACCTCTTCGTTTTCTTTCCATGAAGTAGAAGATGGTCGTCCCGTTATCTCTTTTAGGTCAATTGAAAACAATTTCTCTACAATTGCAGGGGTAAGGTTGCGTACACCCGACGAGACAACGGGGTAATGATAATGATGATGATGATATGCTTATTCGGAAGTTTCAAATGAACAAATAAGCAAAACATATAGCCTTTTAGATGCGGAGTGTCTTATAAGGTATAACCGGTTGTACATATTAAAATTATCCTTTTAGCCCTAGACCAAAGACGAGGGGAATCGAATAATAGTAAGACATAAAAATGTGGCTCCCTGTTTCTCTATTGTCTCTTCTTTTCTTCCCAAACTACCATCACTATGTCTATCATTAATTGACTACCAACTCAATCATTGTAACAACTATCTCTACCATACGACTATCCTTGTACCTTTGATGGGCAACTACCAAACCCACAAGGCCACAAGCAATCAATTAACCACCATTTTCACTTCAAACCCCCT ATGCCTGAAATGAGTATATTGCTGGTAGATGACATTGAGCGACTCATAGAAATCGTGAGACAAGCTGCAAAAGAAGATGCTATGCTTGTCTATACTATTGCTGAACCTTCAATGGCTGGTGCTGCAAGAAAAGCCTGCCAATTATGGGGCGTACCATGCACGGATGTCCTTGGCCCAATAACCGAGGCAATTGCTTCTCATCTTGGAGTTTCGCCTTCAGGGCTTCCCCGTGGAGCAGGAGGTAGAAATTTCTTGAGTGAAGATTACTTCCAAAGGATCGAAGCCATTGAATTTACTATAAAACAAGACGATGGGGCTCTACCTCAGAACTTACGTAAAGCTGATATTGTACTCACTGGTGTTTCTCGTACTGGAAAAACTCCTCTGTCGATTTACCTTGCACAAAAAGGATACAAAGTAGCAAACGTTCCTATCGTAATGGGTGTGGAATTACCCAAAACTTTGTTTGAGATAGATCCGGATAAAGTTTTTGCTTTGACTATTGATCCGGTTGTCTTGCAATCGATTAGAAAATCACGGGCCAAGACTCTAGGCATAGCTGAACATGAAATGCACAACTACTCACAGATGGGGTATGTGAAAAAGGATTTGGAACGTGCGAGTAAAATTTTTACTCAAAATCCCAGCTGGCCTGTAATTGAGGTGACTAGCAAAGCTATTGAAGAAACTGCAGCAATTATCTTAAGGATATACCATGACAGAAAACAGAAGCGATCATTGCCCAGTATTTCAAAGCGCTACTAGAGATGATGAATGCGCGACAGTCTGAAGTTTCTGATGACGAATACTCCGTACATCAGGGTAAGGTTGCGTACACCCGACGAGACAACGGGGTAATGATAATGATGATGATGATATGCTTATTCGGAAGTTTCAAATGAACAAATAAGCAAAACATATAGCCTTTTAGATGCGGAGTGTCTTATAAGGTATAACCGGTTGTACATATTAAAATTATCCTTTTAGCCCTAGACCAAAGACGAGGGGAATCGAATAATAGTAAGACATAAAAATGTGGCTCCCTGTTTCTCTATTGTCTCTTCTTTTCTTCCCAAACTACCATCACTATGTCTATCATTAATTGACTACCAACTCAATCATTGTAACAACTATCTCTACCATACGACTATCCTTGTACCTTTGATGGGCAACTACCAAACCCACAAGGCCACAAGCAATCAATTAACCACCATTTTCACTTCAAACCCCCT ATGCCTGAAATGAGTATATTGCTGGTAGATGACATTGAGCGACTCATAGAAATCGTGAGACAAGCTGCAAAAGAAGATGCTATGCTTGTCTATACTATTGCTGAACCTTCAATGGCTGGTGCTGCAAGAAAAGCCTGCCAATTATGGGGCGTACCATGCACGGATGTCCTTGGCCCAATAACCGAGGCAATTGCTTCTCATCTTGGAGTTTCGCCTTCAGGGCTTCCCCGTGGAGCAGGAGGTAGAAATTTCTTGAGTGAAGATTACTTCCAAAGGATCGAAGCCATTGAATTTACTATAAAACAAGACGATGGGGCTCTACCTCAGAACTTACGTAAAGCTGATATTGTACTCACTGGTGTTTCTCGTACTGGAAAAACTCCTCTGTCGATTTACCTTGCACAAAAAGGATACAAAGTAGCAAACGTTCCTATCGTAATGGGTGTGGAATTACCCAAAACTTTGTTTGAGATAGATCCGGATAAAGTTTTTGCTTTGACTATTGATCCGGTTGTCTTGCAATCGATTAGAAAATCACGGGCCAAGACTCTAGGCATAGCTGAACATGAAATGCACAACTACTCACAGATGGGGTATGTGAAAAAGGATTTGGAACGTGCGAGTAAAATTTTTACTCAAAATCCCAGCTGGCCTGTAATTGAGGTGACTAGCAAAGCTATTGAAGAAACTGCAGCAATTATCTTAAGGATATACCATGACAGAAAACAGAAGCGATCATTGCCCAGTATTTCAAAGCGCTACTAG MPEMSILLVDDIERLIEIVRQAAKEDAMLVYTIAEPSMAGAARKACQLWGVPCTDVLGPITEAIASHLGVSPSGLPRGAGGRNFLSEDYFQRIEAIEFTIKQDDGALPQNLRKADIVLTGVSRTGKTPLSIYLAQKGYKVANVPIVMGVELPKTLFEIDPDKVFALTIDPVVLQSIRKSRAKTLGIAEHEMHNYSQMGYVKKDLERASKIFTQNPSWPVIEVTSKAIEETAAIILRIYHDRKQKRSLPSISKRY Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo11901.1 vs. NCBI nr
Match: gi|902216793|gb|KNA17527.1| (hypothetical protein SOVF_078970 [Spinacia oleracea]) HSP 1 Score: 483.0 bits (1242), Expect = 3.100e-133 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 1
BLAST of Spo11901.1 vs. NCBI nr
Match: gi|731351309|ref|XP_010686968.1| (PREDICTED: probable pyruvate, phosphate dikinase regulatory protein, chloroplastic isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 449.9 bits (1156), Expect = 3.000e-123 Identity = 221/246 (89.84%), Postives = 237/246 (96.34%), Query Frame = 1
BLAST of Spo11901.1 vs. NCBI nr
Match: gi|731351311|ref|XP_010686969.1| (PREDICTED: probable pyruvate, phosphate dikinase regulatory protein, chloroplastic isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 416.4 bits (1069), Expect = 3.600e-113 Identity = 210/246 (85.37%), Postives = 226/246 (91.87%), Query Frame = 1
BLAST of Spo11901.1 vs. NCBI nr
Match: gi|823236971|ref|XP_012451143.1| (PREDICTED: pyruvate, phosphate dikinase regulatory protein 1, chloroplastic isoform X2 [Gossypium raimondii]) HSP 1 Score: 387.1 bits (993), Expect = 2.300e-104 Identity = 188/247 (76.11%), Postives = 224/247 (90.69%), Query Frame = 1
BLAST of Spo11901.1 vs. NCBI nr
Match: gi|823236969|ref|XP_012451142.1| (PREDICTED: pyruvate, phosphate dikinase regulatory protein 1, chloroplastic isoform X1 [Gossypium raimondii]) HSP 1 Score: 387.1 bits (993), Expect = 2.300e-104 Identity = 188/247 (76.11%), Postives = 224/247 (90.69%), Query Frame = 1
BLAST of Spo11901.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RF69_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_078970 PE=3 SV=1) HSP 1 Score: 483.0 bits (1242), Expect = 2.200e-133 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 1
BLAST of Spo11901.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EM25_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g187290 PE=3 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 2.100e-123 Identity = 221/246 (89.84%), Postives = 237/246 (96.34%), Query Frame = 1
BLAST of Spo11901.1 vs. UniProtKB/TrEMBL
Match: A0A0D2VBR1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G176900 PE=3 SV=1) HSP 1 Score: 387.1 bits (993), Expect = 1.600e-104 Identity = 188/247 (76.11%), Postives = 224/247 (90.69%), Query Frame = 1
BLAST of Spo11901.1 vs. UniProtKB/TrEMBL
Match: A0A059CE74_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D00815 PE=3 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 2.100e-104 Identity = 188/247 (76.11%), Postives = 226/247 (91.50%), Query Frame = 1
BLAST of Spo11901.1 vs. UniProtKB/TrEMBL
Match: A0A0B0N648_GOSAR (Pyruvate, phosphate dikinase regulatory 1, chloroplastic-like protein OS=Gossypium arboreum GN=F383_13342 PE=3 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 2.100e-104 Identity = 188/247 (76.11%), Postives = 224/247 (90.69%), Query Frame = 1
BLAST of Spo11901.1 vs. ExPASy Swiss-Prot
Match: PDRP1_MAIZE (Pyruvate, phosphate dikinase regulatory protein, chloroplastic OS=Zea mays GN=PDRP1 PE=1 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 9.900e-95 Identity = 174/248 (70.16%), Postives = 208/248 (83.87%), Query Frame = 1
BLAST of Spo11901.1 vs. ExPASy Swiss-Prot
Match: PDRP1_ORYSI (Probable pyruvate, phosphate dikinase regulatory protein, chloroplastic OS=Oryza sativa subsp. indica GN=PDRP1 PE=3 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 4.200e-93 Identity = 170/246 (69.11%), Postives = 211/246 (85.77%), Query Frame = 1
BLAST of Spo11901.1 vs. ExPASy Swiss-Prot
Match: PDRP1_ORYSJ (Probable pyruvate, phosphate dikinase regulatory protein, chloroplastic OS=Oryza sativa subsp. japonica GN=PDRP1 PE=2 SV=2) HSP 1 Score: 342.4 bits (877), Expect = 4.200e-93 Identity = 170/246 (69.11%), Postives = 211/246 (85.77%), Query Frame = 1
BLAST of Spo11901.1 vs. ExPASy Swiss-Prot
Match: PDRP1_ARATH (Pyruvate, phosphate dikinase regulatory protein 1, chloroplastic OS=Arabidopsis thaliana GN=RP1 PE=1 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 2.100e-89 Identity = 161/246 (65.45%), Postives = 204/246 (82.93%), Query Frame = 1
BLAST of Spo11901.1 vs. ExPASy Swiss-Prot
Match: PDRP2_ARATH (Pyruvate, phosphate dikinase regulatory protein 2 OS=Arabidopsis thaliana GN=RP2 PE=1 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 1.600e-84 Identity = 163/248 (65.73%), Postives = 198/248 (79.84%), Query Frame = 1
BLAST of Spo11901.1 vs. TAIR (Arabidopsis)
Match: AT4G21210.1 (PPDK regulatory protein) HSP 1 Score: 330.1 bits (845), Expect = 1.200e-90 Identity = 161/246 (65.45%), Postives = 204/246 (82.93%), Query Frame = 1
BLAST of Spo11901.1 vs. TAIR (Arabidopsis)
Match: AT3G01200.1 (PPDK regulatory protein 2) HSP 1 Score: 313.9 bits (803), Expect = 8.900e-86 Identity = 163/248 (65.73%), Postives = 198/248 (79.84%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo11901.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo11901.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo11901.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo11901.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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