Spo11859 (gene) | SpinachBase

Overview


Name	Spo11859
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	MADS box transcription factor
Location	chr1 : 13507401 .. 13515555 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCAAAACTACCCTTTTGCCATAAATTCCCTCTTGTTGAGGAACTATCTTTAACAAGCGTAAGGCGTAACCTTACCTTCTTCTTCTATCCATTTCCTACAAACTCATCTTCAAAAATAGAAACCCAGCCATGTTTATTTTTCTCTCTCATTCCCTCTTTTTCTCCCTCCCCCTTTGAAATCTACCTTCCATTTTTAGAAGTATAAGCTAAAAAACAAACAAGGTTTTTTTTTTAGTTTGGGGAAAAATAATCTCCATTTATATAAAAATATAAATCAGATATTCCATATTTGCATATGTACTAGTTTGTAGTGAATTTATAAGTAAATTGAGTAGAGAAATTAAGGGAAAAATAATAAAGAATCAGTGAAAATGGGGAGGGGTAAAGTGGAGCTTAAGCGAATCGAGAACAAGATTAGTAGACAGGTAACATTCTCAAAGAGAAGATCTGGGTTGTTGAAGAAGGCTCATGAGATCTCTGTGCTTTGTGATGCTGAAGTTGCTTTGATTGTTTTCTCTACTAAAGGCAAACTCTTTGAGTATGCTAGCACTGACTCCAGGTTCACTCTTTTTCCACTCTCTCATGCATCAATCTTTATTTTTCACTATTTTAATTCCAATCCATATATGTGTTAATTAATTTTAAATGTAATGTTCAAAATCATTATTACGGAATCACACGATATGATTTCCGTTATTCCATATCGGAAATTCAGTATGCGTTCTGTTTTATCGATTAGTAACAGAGTTTGAGGATGTCAAGATATACATACCTTTTCTCTTTCTAGTCAAACACGCGGGGTCATAAAGTGTGATTAATTTAACTTCTTTAGAGTTTTTTTTATATCATTGACAAACTCTATGGTGTCATGAAGCATGTCAATTTTTTGTGCAATTTGATCAGGTTATGTCCCCCTTTCTCCATACTTTACCTATTTTGGTTAAGAACTACCATTTTCAAAGTCTCCATTAAATCAATTTGATTATTGATATTAAAAAGATAATTATCATAATTAACCTAATTATATTTTGTCTTAGCTTCCTTTATAAGCTGGAGCTTCTCCTAATTGATCCATTTTTTAATTTTACTTTATTTTTGAATCAATTAAATAATAATAAAACTAATACGGAGCATTAATTATTTTTAATACTCCATGTTTAGTACCAGTACGGACTACGGACTACGGAGTATTATTATTTGAACTTGTTAAAAAACAATTACCATTTTTTTTAGTAAAAAACTCATTTCAATTGGTGCAGTATGCAGTATACTACTGTGAATACTTGTACTACTTGATCCAGTGGATATGATCATTATTTATCGGGTTTTATCCAGTTGTTTAGATTTTCCGGACATAGCTAATCCCTGATTGGTTTAGCAAAAAGTAGGAGTATTGAATTTAAAAGTCCTCTGAGGCTGTGAGTTTCACGAGTAGGGATTTAAACCCTCGTTTTATTTCTCGAATTTTTTTTTTTTTTTTTTAAATAAATAAATTATGAAGATTATGCAAAAGTGTTTAGAAAACGGTTTTTTTCCTAAGATTGTGCACAATTCAAGTGTTTAGAAAACGGTAGTCTACTGGTACGACGATTTTGTTAACATATCGGAGGAAATTATATATATATTCTCAAATGCCGTTCTTTTTTGTTTGCTCTATCTGACTTTTCGATGTCTGTGAGATGCGATTTGAAACGTAAATATTATGCGCGTAAAAATTCTAAAAAGTTGATATTATAAAAATATACATTGAACGAATTTAACAAGACTCCAAAATGACTATATTAATTCTTATAGGTTCGAATGGTCAAACTTTTTAAAGTTTGATCTAAAAAATTCAATGTATGGTACACATTTAGGGACGAACGGAGTGAGTAGAATTAGTTAAGCGGTCGATACGAAATGTGTATTTCTTTAATTAATCTAGGGGTAATGGATTGGAGCATGGTGATCTTGAGCTCCGTGTGGGTAAAACCTAGTATTTTTTTGTTACTATTGAGGTTATATTTGATGAAACTTAGGGTTAGGGTCACTCCATTATCATCATCATCATATGTTATTATATGAAAAGGAGTGCTGATCGCCATGGTTACAAGTGATTCTACCTTGGGGATTGAATATTTACATTTATCAATATACGGAGTAATTTGAAAGGAGAGCCACTCAATTTTTTTAATATAATAATTAAATCATATCCATTATATTTTTTATGTACAATTGTACATAACTTATAGAAGTAGCTAGGTTAAAATTTCCTTGCTTAATTTCGAGCTCCATTCTTCAATTGAAATAAGTTAAACATCTTCCGTACTAAGATCATTTTATATATATTTTGACTTATGATGCATTTTATTTACATGATTTTCACTTATTTTTTCTGAACTTAATTTATCTGAACTTATTAAAACTTATCAAAACTGATTTTATTTATAAATTGCATTTGACCAACTTATTTTTTCTGACCTTATTTCCGAAATATATAAGTGAAAATAGGGTGGGCGAAACAAAACCTTAATATACATCCTTAGGGATTCGATTATGTCTAAGTAAAACAATAAGTTTAACGTCTTAACTTTTTTCACATGAGATCTCGTAAACTTATTAAAATTAATCAGCTTGAAGTTGTCTTGGCTTACTTATCGGTCTTGAACTTAACTTAATTGAACTTATTCCCTCAATTAAGCAGGAAGCAGTGCCTTACTTCTTACCAAATAAGTTTCCATATTTCTTACCAACCGTTGTCTTATGTATAAAATACTACGCCTCTATTTGTACGCAATTGTATAAGATTACATACACTTAGGCTCCATTTGGTAGGGCGTAAAACATTTTCATGGAAAACGATTTTTCCTTTTTCAACCGTTTTACGTTGTTTGGTTGGGTAAGGGATGGAAAATAATTTTCCATGACTTCCTCCAAGGTGGAAAACCATTTTCCATTTGAAAGGGAGGGAAACCACTTTTCCTTCTTTCCTCCTTACCTCTTCTCCTTTTTCCCCCTCAATCTTCACCATCTTCTCCCATTTTCCTTTAAGGTACCAAACAAAGGAAAACTAGTTTGAAATTGTGTTTTTCCTTGAAAATTGTTTTCCATGGAAAATCATTTTACAATGAAAACCTTTTACGCCCTACCAAACGGAGCCTTAAAGGTACGTCCACACTCCACATCTTAATCTACCCAACACCAAACTAAGCTATGTCAGCTTCTTAGGCGAGAAACTTGTTAAAGACAGAACAAATAACAAAGTCTCAAATAGTCAAATACCTCCTCGCATATTCCTCCCAACCCCATGGTATTATTTTAGGATTGGAATAACGAAAATGATAAAGGTAGTAACTTGCGACCTTTAAGCTGTGGCAGAGAGATGACATTACATGCTTATGTGTAATGAACGTAATTGGAAACTAAAATATTTAACTTATATTTCTTATAACATATTATACATGTTATTAAAAAGGTAGAAAAATCTTAATATTTTTAATTTATTATAAATATAATATATATTTGATTTCTTCTTTGTAACGACTACCCTATTTACATATTTTTATAGTAAAAATATTTCATTGGTAGTAAAAATATTTTGATGACACATGGTCTATATGACGTCTATATGTACCATTTTAAATACGATATCTTGAGACCTTTAACATCATCATAGAACATTGGCCTTTTACAAAAATGTGTTTTGATTACGGATTACATTCATTTATTATCGCGTATCAAATACTTAGTATATTCATAATTGTTCAAAGAAATCAATTGCTTGTTGGTTCAGTGGTGATTGAGATTGAACTTGGTAGGGAGAACCCATGTTCGATCCCCCGCAACAACAATTGGAATGGGACTAGAACACTTAGAACTCGCCCCGAATCCGGATTAGCCTTAAAGGTGAACCGGGTGCTAACACACAAAAAAAAAAAAAAAAAATGTTCAAAGAACAAATTAGAAGGCGACCATCAATTTATAATCTTTATTTCATGTTTTCTTCTTTCTTGTTTGGATTCAAAAATAACTAGGAAACACCCTAACTACAAATCTATTATCTAAATGATTTTAAAGAAGCCATAACGCATGTCTTATTCTTTTAATTTTGACCTTATCTTGCAGTTTTGAAATTCAATTCAATCTATCTATTACTATATACTAAAAAGATACACCAGGAATGACACGTGTCATTTTCTGGTGCGATTTTTTACCGCCAAAATATTTTTTATTTTTTTACTTTAAAATAAATAAATTACATTACGTTTTTTTAGGAAACTAAGATACAAATATATTTTAATTACCATAGATGTATACTGCATAATATATTATTGGAGGAAAGCTAAATCAATATTATTTTTTCCTTTATGATATAATTTTATTTATGTATTATTATAACTTTTTAATCTAATAAGAAATATAAAAAATATTGATAAATGAACTTCTAATGTTAGTCTACTATTAATAATATAATACATGGTAACGGGTAAGTAAGAAAGTTAATTAAAATAATAATATATGGTAAGTAGACTAACATATAAGTTTATTTATCAAGATTTTACTCAATTCAAAATATGTTGTATTTGACTAACTCGGTTATGCTCGAGTCTTTTCGAAAATTAGTCTTGAGTCATTCGAGTTTGGTTAACATTATTAGATCGTTCTACATACACTTAGCGACTATAATTTTTAACTTTGTATAGTAATATGCAAATTTAGTTCATTTGAATATCTTTTTTACACAACTTTGAATTTATACTTTTTCATATATCCTTTTTACTTTCATGTTTTCCTAATATCATAAGTCTTTTAGTTACTATTAAAATAAAAAATTGTTTTAATAGTAGTCGTGCATTGCACGGGCCCTAAACTAGTTTAATACTATAGCTAACAGTTCTATTCTGTTGCAACAAATTGAGTTGAGATTAATTTAGTTCGAAAGAACAAGTCCTTAGTTATATAAATTGATCAACTATGAAACCAAAAGAAGTGGAGATAGTTCTGAATAGTCTGATTGATAAAAATTGTAAAGTGCAGGGTTGATAATGGGTCCCACTCCCATTAGCCATTGGTGACCAGTTAAGTGTGCTTAAGTCATCACATCAGTGACAAACAGAAATATCGGAAAATTCAGCACCAAGGGACCACATTGTACTATAATCAGACATATTAATTAGCATAAATAAATTTATTACAAAAGCTTTTTCAATGGTGGCAATAGATATTACATGGATTGAGTTGGTTGTCTATATCTTTTGCGTTATTACTACTTGTTTATACTCGGTAAGTACATATGATTCCTGTGAAGGGAGTATAGTAGTTAGTTATATAATTAAAGAAAATATGTTACTGAATTTGGCAGCAGCATGGAAAAAATCCTAGAAAGGTATGAGAGGTACTGTTATGCAGAGAGACAACTTGTTGCACCTGATTCAGAGTCCCAACAGGAGGTATATATTATACTTGATTAGTACTATCCTCTTCATCATTCATCTTAACCTTAATTATATTACATGTTTTAGACCTTAATCTTTCCAAATTACACGACTTTACAACATACTGAAGGGTTATATCTTGCTTCCATCTCATGGCCTTTCAACATATGATAAAAATATATAAATTATTATAGGCCGGCCTTTGTATTATATTACAGTACTATTTCCCCATTATTCCATTAATCCATACATTATGTGTAGGTATGTATTCAAAACTAGCACTCTAGCTTAATACTTAAACTTTAAGTGAATCCTGGGGTAGTGTAGTGGTGTTCTTGGATTGATTCTCACCACAATGCACGCAAGGAGAGATCTAGCCCGGGGTAGAAAATGTTTAACACTTTAACTTGAGCTAGATTTTACCTAAGGTAATCTAGACCTAGCTTACTGGCCATATTCTTTGTTTTATAATTGCATTGGATGTTAAGTCTACTCAAGTTGACATTAACTAACGCGCTCCATGTAATGCAAGTGCTGGTTTTGAAAACCTAAGATGAATGAATAATCCATGTTTATATCTAGAACTTCATTTTCAATTAGGTCATACTTAAACAAGCTAGGCGCACTTACTAGCTGGGTATATATATGTAATTATCATCCTTCTCTAGGTAGCTGAATGACTTTTCTACCTTCTTTTAAGATGTTTTTTTGGATGTTGTAACTTTTAAATAGGGAAGCTGGGCTATGGAGTATCCAAAACTCGTCTCCAAACTTGAGGTCTTAGAAAGGAACATGAGGTAAATACAAACTTCCCACAGGATATATATAATATAACTTGCTGTTTTTTTAAGTAGAAATATAATTTGATGCCATACAATTACATCACCTTCCACTTCACATGAATATGCCATTTTTCATCTCTTTTTTGATTCAAGAACTGATTATTCGCGTTAATAAGCCAGCCACACACACTAAGTCATCCTTCTGATCTTCATACGTCCAACACCTAACTGTGATTAGCTAGGTAAAAGTATTGGAATGTTAAACTTGTTTCATGTTTTATAGAAACGTCATAGCATCGCAAACATGTAAGAACAACCCTAACTGGCTGTTAGTCCAGGTAAAGTCTTTATATGTATCATGTATGTATATATTCATAAATAAGCCCCTTTTTCACCAAGTTGATTTATTAGAGCACATATCAGGCACTATGTAGGAGAAGATACTGATGCATTGAGCCTAAGGGAACTCCAACATCTCGAGCAACAGCTTGACGTAGCTCTTAAGCGAATAAGAAGCAAGAAGGTATACCAAGTATTTAATTATATATCATCCCTTTAATTTCTTCGGTTCTCAAGTCACATTGATTAGTGATGTTTGATCGAACTAGTAATATGACAACTAAATCCGCACATTTTTATATTATGTATAACTTTCTGCACTACATCTAAGTAAATCTCTCTCATCTATTCTTGCAGAATCAACTGATGCATGAATCCATCTCTCAGCTCAACAAAAAAGTACGCGACATCCTTCAATGTTTCCTTTTTTTTTTTTTCTAGGTTTGAGAGGATTAATAAATTGAATCAATTCACTTATTTAACTTGTGTTTTGGCAGGAAAAAGCTATGCAGGAGCAAAATAACCAATTATCCAAACTGGTATGTTTTTTCAAACCAAATTTTTCTTCCATAATTTTTTCTTGTAGGATGTAGATTATTCTATACTTTTTTTTTTATTAATGTTACATACATTGCGACATAAAATAGATGATGGAGAATGACAAGAAGGTGGTGGAACAACAAAAAGACGAGCAAAACCCTAGTCAAGTCTTCATGCTATCAGCATCAAATCCATTTCAATTTCCTTCTCTCACCATTGGGTAAGCACCTTTTCTTAATACGTTGATTTAAACATTTTTGGCAAACTATTAAAATGCGCTCTCATGTGATGAGGCAACCATTTTTGGACTATGTTTTTCCCCTCCAACCTCCTGGATTGTTATCACATTAATTGAGAATAAGAAACTCTGGCCTTGCTTAGCTAATAGCCTCTTCAACCTAATAATAAATTAATAATGATTCTATTTAGATTTTTAAATCATCCATTTTTGTGACAAAAGATACCTATAAAATAATACAATAAAATTAGTTAGTATGAGTAGAATTTAGAGTTGAACATAATAATGAATGATTATGGTTTATTTCCCCATGTATTATGCAGAGGTGCTTATCATGAGATGAGAGAATTACAGATGGAGTCAGCGAACCTGGAAGCTCAAGGACCATCAAGAACAAACACTAATATTCCGGCATGGATGTTTAGTCATCATGTTGGTGAATGATCGACAAGCTTTTTCAGCTGCTTGCTCAATCGATCAAATGCTCTATAATTTCAGTCCTCTGATATGAACGATGAGTATAAAAGCGAATTCGATCGGTATTATATTTATATATATGGAGTAATATATAATGTGTTGTTTTACTACTAATTTGTAAATCATAATATTAATAACTACAAACAGCAAATCAAATTAAGAACAAAGGGGTTTGGAATTGGATGCTACCAAACAACCGGCCTCGTGATAAATGTACGGCCTAGCTAGTAAATTTTGAGTATTTTGGTAATATATCTCAAATATTAATCGAATGTATTATGGTTTATTGAAATGTATTATGTATGCATCTCTGGTGTACAAATTAAATATTCCCTGTATGGCTGTATTATGTCTATCTTCAAG

mRNA sequence

TTCCCAAAACTACCCTTTTGCCATAAATTCCCTCTTGTTGAGGAACTATCTTTAACAAGCGTAAGGCGTAACCTTACCTTCTTCTTCTATCCATTTCCTACAAACTCATCTTCAAAAATAGAAACCCAGCCATGTTTATTTTTCTCTCTCATTCCCTCTTTTTCTCCCTCCCCCTTTGAAATCTACCTTCCATTTTTAGAAGTATAAGCTAAAAAACAAACAAGGTTTTTTTTTTAGTTTGGGGAAAAATAATCTCCATTTATATAAAAATATAAATCAGATATTCCATATTTGCATATGTACTAGTTTGTAGTGAATTTATAAGTAAATTGAGTAGAGAAATTAAGGGAAAAATAATAAAGAATCAGTGAAAATGGGGAGGGGTAAAGTGGAGCTTAAGCGAATCGAGAACAAGATTAGTAGACAGGTAACATTCTCAAAGAGAAGATCTGGGTTGTTGAAGAAGGCTCATGAGATCTCTGTGCTTTGTGATGCTGAAGTTGCTTTGATTGTTTTCTCTACTAAAGGCAAACTCTTTGAGTATGCTAGCACTGACTCCAGCAGCATGGAAAAAATCCTAGAAAGGTATGAGAGGTACTGTTATGCAGAGAGACAACTTGTTGCACCTGATTCAGAGTCCCAACAGGAGGGAAGCTGGGCTATGGAGTATCCAAAACTCGTCTCCAAACTTGAGGTCTTAGAAAGGAACATGAGAGCACATATCAGGCACTATGTAGGAGAAGATACTGATGCATTGAGCCTAAGGGAACTCCAACATCTCGAGCAACAGCTTGACGTAGCTCTTAAGCGAATAAGAAGCAAGAAGAATCAACTGATGCATGAATCCATCTCTCAGCTCAACAAAAAAGAAAAAGCTATGCAGGAGCAAAATAACCAATTATCCAAACTGATGATGGAGAATGACAAGAAGGTGGTGGAACAACAAAAAGACGAGCAAAACCCTAGTCAAGTCTTCATGCTATCAGCATCAAATCCATTTCAATTTCCTTCTCTCACCATTGGAGGTGCTTATCATGAGATGAGAGAATTACAGATGGAGTCAGCGAACCTGGAAGCTCAAGGACCATCAAGAACAAACACTAATATTCCGGCATGGATGTTTAGTCATCATGTTGGTGAATGATCGACAAGCTTTTTCAGCTGCTTGCTCAATCGATCAAATGCTCTATAATTTCAGTCCTCTGATATGAACGATGAGTATAAAAGCGAATTCGATCGGTATTATATTTATATATATGGAGTAATATATAATGTGTTGTTTTACTACTAATTTGTAAATCATAATATTAATAACTACAAACAGCAAATCAAATTAAGAACAAAGGGGTTTGGAATTGGATGCTACCAAACAACCGGCCTCGTGATAAATGTACGGCCTAGCTAGTAAATTTTGAGTATTTTGGTAATATATCTCAAATATTAATCGAATGTATTATGGTTTATTGAAATGTATTATGTATGCATCTCTGGTGTACAAATTAAATATTCCCTGTATGGCTGTATTATGTCTATCTTCAAG

Coding sequence (CDS)

ATGGGGAGGGGTAAAGTGGAGCTTAAGCGAATCGAGAACAAGATTAGTAGACAGGTAACATTCTCAAAGAGAAGATCTGGGTTGTTGAAGAAGGCTCATGAGATCTCTGTGCTTTGTGATGCTGAAGTTGCTTTGATTGTTTTCTCTACTAAAGGCAAACTCTTTGAGTATGCTAGCACTGACTCCAGCAGCATGGAAAAAATCCTAGAAAGGTATGAGAGGTACTGTTATGCAGAGAGACAACTTGTTGCACCTGATTCAGAGTCCCAACAGGAGGGAAGCTGGGCTATGGAGTATCCAAAACTCGTCTCCAAACTTGAGGTCTTAGAAAGGAACATGAGAGCACATATCAGGCACTATGTAGGAGAAGATACTGATGCATTGAGCCTAAGGGAACTCCAACATCTCGAGCAACAGCTTGACGTAGCTCTTAAGCGAATAAGAAGCAAGAAGAATCAACTGATGCATGAATCCATCTCTCAGCTCAACAAAAAAGAAAAAGCTATGCAGGAGCAAAATAACCAATTATCCAAACTGATGATGGAGAATGACAAGAAGGTGGTGGAACAACAAAAAGACGAGCAAAACCCTAGTCAAGTCTTCATGCTATCAGCATCAAATCCATTTCAATTTCCTTCTCTCACCATTGGAGGTGCTTATCATGAGATGAGAGAATTACAGATGGAGTCAGCGAACCTGGAAGCTCAAGGACCATCAAGAACAAACACTAATATTCCGGCATGGATGTTTAGTCATCATGTTGGTGAATGA

Protein sequence

MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYASTDSSSMEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLEVLERNMRAHIRHYVGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLMMENDKKVVEQQKDEQNPSQVFMLSASNPFQFPSLTIGGAYHEMRELQMESANLEAQGPSRTNTNIPAWMFSHHVGE

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo11859.1	Spo11859.1	mRNA

Homology

[Close]

BLAST of Spo11859.1 vs. NCBI nr
Match: gi|902169680|gb|KNA07693.1| (hypothetical protein SOVF_169520 isoform A [Spinacia oleracea])

HSP 1 Score: 474.6 bits (1220), Expect = 1.100e-130
Identity = 251/256 (98.05%), Postives = 251/256 (98.05%), Query Frame = 1


		  
Query: 1   MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST 60
           MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST
Sbjct: 1   MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST 60

Query: 61  DSSSMEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLEVLERNMRAHIRHY 120
           DSSSMEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLE LERNMR    HY
Sbjct: 61  DSSSMEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLEALERNMR----HY 120

Query: 121 VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM 180
           VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM
Sbjct: 121 VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM 180

Query: 181 MENDKKVVEQQKDEQNPSQVFMLSASNPFQFPSLTIGGAYHEMRELQMESANLEAQGPSR 240
           MENDKKVVEQQKDEQNPSQVFMLSASNPFQFPSLTIGGAYHEMRELQMESANLEAQGPSR
Sbjct: 181 MENDKKVVEQQKDEQNPSQVFMLSASNPFQFPSLTIGGAYHEMRELQMESANLEAQGPSR 240

Query: 241 TNTNIPAWMFSHHVGE 257
           TNTNIPAWMFSHHVGE
Sbjct: 241 TNTNIPAWMFSHHVGE 252

[Close]

BLAST of Spo11859.1 vs. NCBI nr
Match: gi|902169681|gb|KNA07694.1| (hypothetical protein SOVF_169520 isoform B [Spinacia oleracea])

HSP 1 Score: 468.4 bits (1204), Expect = 8.100e-129
Identity = 250/256 (97.66%), Postives = 250/256 (97.66%), Query Frame = 1


		  
Query: 1   MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST 60
           MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST
Sbjct: 1   MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST 60

Query: 61  DSSSMEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLEVLERNMRAHIRHY 120
           DSS MEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLE LERNMR    HY
Sbjct: 61  DSS-MEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLEALERNMR----HY 120

Query: 121 VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM 180
           VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM
Sbjct: 121 VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM 180

Query: 181 MENDKKVVEQQKDEQNPSQVFMLSASNPFQFPSLTIGGAYHEMRELQMESANLEAQGPSR 240
           MENDKKVVEQQKDEQNPSQVFMLSASNPFQFPSLTIGGAYHEMRELQMESANLEAQGPSR
Sbjct: 181 MENDKKVVEQQKDEQNPSQVFMLSASNPFQFPSLTIGGAYHEMRELQMESANLEAQGPSR 240

Query: 241 TNTNIPAWMFSHHVGE 257
           TNTNIPAWMFSHHVGE
Sbjct: 241 TNTNIPAWMFSHHVGE 251

[Close]

BLAST of Spo11859.1 vs. NCBI nr
Match: gi|731316954|ref|XP_010666772.1| (PREDICTED: truncated transcription factor CAULIFLOWER A-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 349.0 bits (894), Expect = 7.100e-93
Identity = 197/257 (76.65%), Postives = 217/257 (84.44%), Query Frame = 1


		  
Query: 1   MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST 60
           MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST
Sbjct: 1   MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST 60

Query: 61  DSSSMEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLEVLERNMRAHIRHY 120
           DSS ME+ILERYERYCYAERQLVA DSE QQE     E  +  S +   + ++  H   Y
Sbjct: 61  DSS-MERILERYERYCYAERQLVATDSEGQQE-----ELEETGSDVGQCKLSLALH---Y 120

Query: 121 VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM 180
           VGED D +SLRELQHLEQQLD+ALKRIR KKNQLMHESISQL+KKEK MQEQNNQL+KLM
Sbjct: 121 VGEDVDTMSLRELQHLEQQLDIALKRIRGKKNQLMHESISQLHKKEKTMQEQNNQLTKLM 180

Query: 181 MENDKKVVEQQKDEQNPSQVFMLSASNPFQFPSLTIGGAYHEMRELQMESAN-LEAQGPS 240
            ENDKKV EQQ ++QNPSQ F+L  S+PF FPSL+IGGAYHEMR LQ+E  N  +A+GPS
Sbjct: 181 KENDKKVREQQIEQQNPSQGFLLPESHPFAFPSLSIGGAYHEMRALQIEETNHHQAEGPS 240

Query: 241 RTNTNIPAWMFSHHVGE 257
            TNTNIPAWMF+ +VGE
Sbjct: 241 STNTNIPAWMFT-NVGE 247

[Close]

BLAST of Spo11859.1 vs. NCBI nr
Match: gi|32478049|gb|AAP83386.1| (FRUITFULL-like MADS-box [Phytolacca americana])

HSP 1 Score: 270.4 bits (690), Expect = 3.200e-69
Identity = 148/220 (67.27%), Postives = 174/220 (79.09%), Query Frame = 1


		  
Query: 36  SVLCDAEVALIVFSTKGKLFEYASTDSSSMEKILERYERYCYAERQLVAPDSESQQEGSW 95
           SVLCDAEVALIVFSTKGKLFEY++   SSME ILERYERY YAE+QLVA DSESQQ+GSW
Sbjct: 1   SVLCDAEVALIVFSTKGKLFEYST--ESSMEAILERYERYSYAEKQLVATDSESQQQGSW 60

Query: 96  AMEYPKLVSKLEVLERNMRAHIRHYVGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLM 155
           AMEYP+L+SKLEVL+RNMR    HYVG+D D+L+LRELQHLEQQ+D ALKRIR++KNQ+M
Sbjct: 61  AMEYPRLISKLEVLQRNMR----HYVGQDIDSLALRELQHLEQQIDTALKRIRNRKNQVM 120

Query: 156 HESISQLNKKEKAMQEQNNQLSKLMMENDKKVVEQQKDEQNPSQVFMLSASNPFQFPSLT 215
           HESISQ  KKEKAMQEQNN L KL+ E  K    Q  +E+NPSQ  MLS+SNP  FPSL+
Sbjct: 121 HESISQFQKKEKAMQEQNNLLVKLVKEKGK---TQVIEEENPSQALMLSSSNPLSFPSLS 180

Query: 216 IGGAYHEMRELQMESANLEAQG---PSRTNTNIPAWMFSH 253
           IGG+Y E  E+ +E  + + QG   P  +NT +P WM  H
Sbjct: 181 IGGSYQERTEMGVEQVHYQGQGQVVPPNSNTTMPPWMLRH 211

[Close]

BLAST of Spo11859.1 vs. NCBI nr
Match: gi|548580073|gb|AGX01541.1| (FRUITFULL-like protein, partial [Eomecon chionantha])

HSP 1 Score: 269.2 bits (687), Expect = 7.200e-69
Identity = 161/255 (63.14%), Postives = 197/255 (77.25%), Query Frame = 1


		  
Query: 1   MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST 60
           MGRG+V+LKRIENKI+RQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY ST
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-ST 60

Query: 61  DSSSMEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLEVLERNMRAHIRHY 120
           DS  M++ILERYER  YAER+LVA + +   +G+W++EY KL +K+E+L++N R    HY
Sbjct: 61  DSG-MDRILERYERCSYAERELVANELD---QGNWSLEYSKLKAKIEILQKNQR----HY 120

Query: 121 VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM 180
           +GED D++SL+ELQ+LEQQLD ALK+IRS+KNQLM+ESIS+L KKEKA+QEQNNQL K +
Sbjct: 121 MGEDLDSMSLKELQNLEQQLDTALKQIRSRKNQLMYESISELQKKEKALQEQNNQLGKKL 180

Query: 181 MENDKKVVEQQK--DEQNPSQ---VFMLSASNPFQFPSLTIGGAYHEMRELQMESANLEA 240
            E +K+V +QQ   D+QN  Q    F+LS S     PSL IGG+Y E R    E      
Sbjct: 181 KEKEKEVAQQQAQWDQQNQGQSSPTFLLSQS----LPSLNIGGSYQEQRGNGGEEERTRP 240

Query: 241 QGPSRTNTNI-PAWM 250
           Q  +RTNT + P WM
Sbjct: 241 Q-TTRTNTTLMPPWM 241

[Close]

BLAST of Spo11859.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QLY8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_169520 PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 7.900e-131
Identity = 251/256 (98.05%), Postives = 251/256 (98.05%), Query Frame = 1


		  
Query: 1   MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST 60
           MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST
Sbjct: 1   MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST 60

Query: 61  DSSSMEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLEVLERNMRAHIRHY 120
           DSSSMEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLE LERNMR    HY
Sbjct: 61  DSSSMEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLEALERNMR----HY 120

Query: 121 VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM 180
           VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM
Sbjct: 121 VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM 180

Query: 181 MENDKKVVEQQKDEQNPSQVFMLSASNPFQFPSLTIGGAYHEMRELQMESANLEAQGPSR 240
           MENDKKVVEQQKDEQNPSQVFMLSASNPFQFPSLTIGGAYHEMRELQMESANLEAQGPSR
Sbjct: 181 MENDKKVVEQQKDEQNPSQVFMLSASNPFQFPSLTIGGAYHEMRELQMESANLEAQGPSR 240

Query: 241 TNTNIPAWMFSHHVGE 257
           TNTNIPAWMFSHHVGE
Sbjct: 241 TNTNIPAWMFSHHVGE 252

[Close]

BLAST of Spo11859.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QKC7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_169520 PE=4 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 5.600e-129
Identity = 250/256 (97.66%), Postives = 250/256 (97.66%), Query Frame = 1


		  
Query: 1   MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST 60
           MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST
Sbjct: 1   MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST 60

Query: 61  DSSSMEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLEVLERNMRAHIRHY 120
           DSS MEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLE LERNMR    HY
Sbjct: 61  DSS-MEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLEALERNMR----HY 120

Query: 121 VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM 180
           VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM
Sbjct: 121 VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM 180

Query: 181 MENDKKVVEQQKDEQNPSQVFMLSASNPFQFPSLTIGGAYHEMRELQMESANLEAQGPSR 240
           MENDKKVVEQQKDEQNPSQVFMLSASNPFQFPSLTIGGAYHEMRELQMESANLEAQGPSR
Sbjct: 181 MENDKKVVEQQKDEQNPSQVFMLSASNPFQFPSLTIGGAYHEMRELQMESANLEAQGPSR 240

Query: 241 TNTNIPAWMFSHHVGE 257
           TNTNIPAWMFSHHVGE
Sbjct: 241 TNTNIPAWMFSHHVGE 251

[Close]

BLAST of Spo11859.1 vs. UniProtKB/TrEMBL
Match: Q7XBL4_PHYAM (FRUITFULL-like MADS-box (Fragment) OS=Phytolacca americana GN=PaFL2 PE=2 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.300e-69
Identity = 148/220 (67.27%), Postives = 174/220 (79.09%), Query Frame = 1


		  
Query: 36  SVLCDAEVALIVFSTKGKLFEYASTDSSSMEKILERYERYCYAERQLVAPDSESQQEGSW 95
           SVLCDAEVALIVFSTKGKLFEY++   SSME ILERYERY YAE+QLVA DSESQQ+GSW
Sbjct: 1   SVLCDAEVALIVFSTKGKLFEYST--ESSMEAILERYERYSYAEKQLVATDSESQQQGSW 60

Query: 96  AMEYPKLVSKLEVLERNMRAHIRHYVGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLM 155
           AMEYP+L+SKLEVL+RNMR    HYVG+D D+L+LRELQHLEQQ+D ALKRIR++KNQ+M
Sbjct: 61  AMEYPRLISKLEVLQRNMR----HYVGQDIDSLALRELQHLEQQIDTALKRIRNRKNQVM 120

Query: 156 HESISQLNKKEKAMQEQNNQLSKLMMENDKKVVEQQKDEQNPSQVFMLSASNPFQFPSLT 215
           HESISQ  KKEKAMQEQNN L KL+ E  K    Q  +E+NPSQ  MLS+SNP  FPSL+
Sbjct: 121 HESISQFQKKEKAMQEQNNLLVKLVKEKGK---TQVIEEENPSQALMLSSSNPLSFPSLS 180

Query: 216 IGGAYHEMRELQMESANLEAQG---PSRTNTNIPAWMFSH 253
           IGG+Y E  E+ +E  + + QG   P  +NT +P WM  H
Sbjct: 181 IGGSYQERTEMGVEQVHYQGQGQVVPPNSNTTMPPWMLRH 211

[Close]

BLAST of Spo11859.1 vs. UniProtKB/TrEMBL
Match: U3RE74_9MAGN (FRUITFULL-like protein (Fragment) OS=Eomecon chionantha GN=FL1 PE=2 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 5.000e-69
Identity = 161/255 (63.14%), Postives = 197/255 (77.25%), Query Frame = 1


		  
Query: 1   MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST 60
           MGRG+V+LKRIENKI+RQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY ST
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-ST 60

Query: 61  DSSSMEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLEVLERNMRAHIRHY 120
           DS  M++ILERYER  YAER+LVA + +   +G+W++EY KL +K+E+L++N R    HY
Sbjct: 61  DSG-MDRILERYERCSYAERELVANELD---QGNWSLEYSKLKAKIEILQKNQR----HY 120

Query: 121 VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM 180
           +GED D++SL+ELQ+LEQQLD ALK+IRS+KNQLM+ESIS+L KKEKA+QEQNNQL K +
Sbjct: 121 MGEDLDSMSLKELQNLEQQLDTALKQIRSRKNQLMYESISELQKKEKALQEQNNQLGKKL 180

Query: 181 MENDKKVVEQQK--DEQNPSQ---VFMLSASNPFQFPSLTIGGAYHEMRELQMESANLEA 240
            E +K+V +QQ   D+QN  Q    F+LS S     PSL IGG+Y E R    E      
Sbjct: 181 KEKEKEVAQQQAQWDQQNQGQSSPTFLLSQS----LPSLNIGGSYQEQRGNGGEEERTRP 240

Query: 241 QGPSRTNTNI-PAWM 250
           Q  +RTNT + P WM
Sbjct: 241 Q-TTRTNTTLMPPWM 241

[Close]

BLAST of Spo11859.1 vs. UniProtKB/TrEMBL
Match: K4BC73_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 8.600e-69
Identity = 156/255 (61.18%), Postives = 193/255 (75.69%), Query Frame = 1


		  
Query: 1   MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST 60
           MGRG+VELKRIENKISRQVTFSKRRSGLLKKA+EISVLCDA+VALIVFSTKGKLFEY+S 
Sbjct: 1   MGRGRVELKRIENKISRQVTFSKRRSGLLKKANEISVLCDADVALIVFSTKGKLFEYSSN 60

Query: 61  DSSSMEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLEVLERNMRAHIRHY 120
           D SSME ILERYER  YAERQ+ A DS+ ++  +W++EYPKL+S++E+L+RN    IRHY
Sbjct: 61  D-SSMESILERYERCSYAERQMNANDSDPKE--NWSVEYPKLMSRIELLQRN----IRHY 120

Query: 121 VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM 180
           +G+D D LSLRELQ +EQQ+D +LKRIRS+KNQLMHESIS+L KKEKA+QEQNN ++K +
Sbjct: 121 MGQDLDPLSLRELQSIEQQIDTSLKRIRSRKNQLMHESISELQKKEKALQEQNNLITKKL 180

Query: 181 MENDKKVVEQQKDEQNPSQVFMLSASNPFQFPSLTIGGAYHEMRELQMESANLEAQGPSR 240
            EN+K   +     QN + V +  + +  Q P+LTIGGA+  M       A+    G + 
Sbjct: 181 KENEK--TQPNSSGQNSATVHVFPSHSHHQLPNLTIGGAFGGMNRDGSGQAH-HYPGSNN 240

Query: 241 TNTN---IPAWMFSH 253
            N N   IP WM  H
Sbjct: 241 NNNNSSLIPPWMLRH 245

[Close]

BLAST of Spo11859.1 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 5.200e-67
Identity = 147/255 (57.65%), Postives = 186/255 (72.94%), Query Frame = 1


		  
Query: 1   MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST 60
           MGRG+V+LKRIENKI+RQVTFSKRRSGLLKKAHEISVLCDAEV LIVFSTKGKLFEYA  
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYA-- 60

Query: 61  DSSSMEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLEVLERNMRAHIRHY 120
           + S ME++LERYERY +AERQLV  D  S   GSW +E+ KL ++LEVL+RN     +HY
Sbjct: 61  NDSCMERLLERYERYSFAERQLVPTDHTS--PGSWTLEHAKLKARLEVLQRNQ----KHY 120

Query: 121 VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM 180
           VGED ++L+++ELQ+LE QLD ALK IRS+KNQLMHESIS L K+++A+QEQNNQLSK +
Sbjct: 121 VGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKV 180

Query: 181 MENDKKVVEQQKDEQNPSQVFMLSASNPFQFPSLTIGGAYHEMREL---QMESANLEAQG 240
            E +K+V +Q + +Q   ++   +   P Q  S  +G AY     +   ++E  N   Q 
Sbjct: 181 KEREKEVAQQNQWDQQNHEINSSTFVLPQQLDSPHLGEAYQNTNVVDNGEVEGGNSSQQQ 240

Query: 241 PSRTNTNIPAWMFSH 253
            +  NT +P WM  H
Sbjct: 241 GAANNTVMPQWMLRH 247

[Close]

BLAST of Spo11859.1 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 9.100e-64
Identity = 150/260 (57.69%), Postives = 189/260 (72.69%), Query Frame = 1


		  
Query: 1   MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST 60
           MGRG+V+LKRIENKI+RQVTFSKRR+GLLKKAHEISVLCDAEVAL+VFS KGKLFEY ST
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEY-ST 60

Query: 61  DSSSMEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLEVLERNMRAHIRHY 120
           DS  MEKILERYERY YAERQL+AP+S+     +W+MEY +L +K+E+LERN R    HY
Sbjct: 61  DSC-MEKILERYERYSYAERQLIAPESDVNT--NWSMEYNRLKAKIELLERNQR----HY 120

Query: 121 VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM 180
           +GED  A+S +ELQ+LEQQLD ALK IRS+KNQLMH+SI++L +KEKA+QEQN+ LSK +
Sbjct: 121 LGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQI 180

Query: 181 MENDK--KVVEQQKDEQN----------PSQV---FMLSASNPFQFPSLTIGGAYHEMRE 240
            E +K  +  ++Q D+QN          P Q+   +MLS       P L +GG Y E   
Sbjct: 181 KEREKILRAQQEQWDQQNHGHNMPPPPPPQQIQHPYMLSHQ---PSPFLNMGGLYQEEDP 240

Query: 241 LQMESANLEAQGPSRTNTNI 246
           ++M   +L+       N N+
Sbjct: 241 MEMRRNDLDLSLEPVYNCNL 249

[Close]

BLAST of Spo11859.1 vs. ExPASy Swiss-Prot
Match: 2AP1_BRAOT (Floral homeotic protein APETALA 1-2 OS=Brassica oleracea var. italica GN=2AP1 PE=2 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.000e-62
Identity = 146/259 (56.37%), Postives = 186/259 (71.81%), Query Frame = 1


		  
Query: 1   MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST 60
           MGRG+V+LKRIENKI+RQVTFSKRR+GL+KKAHEISVLCDAEVAL+VFS KGKLFEY ST
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEY-ST 60

Query: 61  DSSSMEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLEVLERNMRAHIRHY 120
           D S MEKILERYERY YAERQL+AP+S+S    +W+MEY +L +K+E+LERN     RHY
Sbjct: 61  D-SCMEKILERYERYSYAERQLIAPESDSNT--NWSMEYNRLKAKIELLERNQ----RHY 120

Query: 121 VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM 180
           +GED  A+S +ELQ+LEQQLD ALK IRS+KNQLM++SI++L +KEKA+QEQN+ LSK +
Sbjct: 121 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSINELQRKEKAIQEQNSMLSKQI 180

Query: 181 MENDK--KVVEQQKDEQN-------PSQVFMLSASNPFQF-----PSLTIGGAYHEMREL 240
            E +   +  ++Q DEQN       P         +P+       P L +GG Y E  ++
Sbjct: 181 KERENVLRAQQEQWDEQNHGHNMPPPPPPQQHQIQHPYMLSHQPSPFLNMGGLYQEEDQM 240

Query: 241 QMESANLEAQGPSRTNTNI 246
            M   +L+       N N+
Sbjct: 241 AMRRNDLDLSLEPVYNCNL 251

[Close]

BLAST of Spo11859.1 vs. ExPASy Swiss-Prot
Match: AP1A_BRAOA (Floral homeotic protein APETALA 1 A OS=Brassica oleracea var. alboglabra GN=AP1A PE=3 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.000e-62
Identity = 146/259 (56.37%), Postives = 186/259 (71.81%), Query Frame = 1


		  
Query: 1   MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST 60
           MGRG+V+LKRIENKI+RQVTFSKRR+GL+KKAHEISVLCDAEVAL+VFS KGKLFEY ST
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEY-ST 60

Query: 61  DSSSMEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLEVLERNMRAHIRHY 120
           D S MEKILERYERY YAERQL+AP+S+S    +W+MEY +L +K+E+LERN     RHY
Sbjct: 61  D-SCMEKILERYERYSYAERQLIAPESDSNT--NWSMEYNRLKAKIELLERNQ----RHY 120

Query: 121 VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM 180
           +GED  A+S +ELQ+LEQQLD ALK IRS+KNQLM++SI++L +KEKA+QEQN+ LSK +
Sbjct: 121 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSINELQRKEKAIQEQNSMLSKQI 180

Query: 181 MENDK--KVVEQQKDEQN-------PSQVFMLSASNPFQF-----PSLTIGGAYHEMREL 240
            E +   +  ++Q DEQN       P         +P+       P L +GG Y E  ++
Sbjct: 181 KERENVLRAQQEQWDEQNHGHNMPPPPPPQQHQIQHPYMLSHQPSPFLNMGGLYQEEDQM 240

Query: 241 QMESANLEAQGPSRTNTNI 246
            M   +L+       N N+
Sbjct: 241 AMRRNDLDLSLEPVYNCNL 251

[Close]

BLAST of Spo11859.1 vs. ExPASy Swiss-Prot
Match: AP1A_BRAOB (Floral homeotic protein APETALA 1 A OS=Brassica oleracea var. botrytis GN=AP1A PE=2 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.000e-62
Identity = 146/259 (56.37%), Postives = 186/259 (71.81%), Query Frame = 1


		  
Query: 1   MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST 60
           MGRG+V+LKRIENKI+RQVTFSKRR+GL+KKAHEISVLCDAEVAL+VFS KGKLFEY ST
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEY-ST 60

Query: 61  DSSSMEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLEVLERNMRAHIRHY 120
           D S MEKILERYERY YAERQL+AP+S+S    +W+MEY +L +K+E+LERN     RHY
Sbjct: 61  D-SCMEKILERYERYSYAERQLIAPESDSNT--NWSMEYNRLKAKIELLERNQ----RHY 120

Query: 121 VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM 180
           +GED  A+S +ELQ+LEQQLD ALK IRS+KNQLM++SI++L +KEKA+QEQN+ LSK +
Sbjct: 121 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSINELQRKEKAIQEQNSMLSKQI 180

Query: 181 MENDK--KVVEQQKDEQN-------PSQVFMLSASNPFQF-----PSLTIGGAYHEMREL 240
            E +   +  ++Q DEQN       P         +P+       P L +GG Y E  ++
Sbjct: 181 KERENVLRAQQEQWDEQNHGHNMPPPPPPQQHQIQHPYMLSHQPSPFLNMGGLYQEEDQM 240

Query: 241 QMESANLEAQGPSRTNTNI 246
            M   +L+       N N+
Sbjct: 241 AMRRNDLDLSLEPVYNCNL 251

[Close]

BLAST of Spo11859.1 vs. TAIR (Arabidopsis)
Match: AT1G69120.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 240.7 bits (613), Expect = 9.700e-64
Identity = 147/248 (59.27%), Postives = 181/248 (72.98%), Query Frame = 1


		  
Query: 1   MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST 60
           MGRG+V+LKRIENKI+RQVTFSKRR+GLLKKAHEISVLCDAEVAL+VFS KGKLFEY ST
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEY-ST 60

Query: 61  DSSSMEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLEVLERNMRAHIRHY 120
           D S MEKILERYERY YAERQL+AP  ES    +W+MEY +L +K+E+LERN     RHY
Sbjct: 61  D-SCMEKILERYERYSYAERQLIAP--ESDVNTNWSMEYNRLKAKIELLERNQ----RHY 120

Query: 121 VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM 180
           +GED  A+S +ELQ+LEQQLD ALK IR++KNQLM+ESI++L KKEKA+QEQN+ LSK +
Sbjct: 121 LGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQI 180

Query: 181 MENDK--KVVEQQKDEQN-------PSQVFMLSASNPFQF-----PSLTIGGAYHEMREL 235
            E +K  +  ++Q D+QN       P         +P+       P L +GG Y E   +
Sbjct: 181 KEREKILRAQQEQWDQQNQGHNMPPPLPPQQHQIQHPYMLSHQPSPFLNMGGLYQEDDPM 240

[Close]

BLAST of Spo11859.1 vs. TAIR (Arabidopsis)
Match: AT1G26310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 235.0 bits (598), Expect = 5.300e-62
Identity = 137/246 (55.69%), Postives = 177/246 (71.95%), Query Frame = 1


		  
Query: 1   MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST 60
           MGRG+VELKRIENKI+RQVTFSKRR+GLLKKA EISVLCDAEV+LIVFS KGKLFEY+S 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSS- 60

Query: 61  DSSSMEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLEVLERNMRAHIRHY 120
             S MEK+LERYERY YAERQL+APDS    + +W+MEY +L +K+E+LERN R    HY
Sbjct: 61  -ESCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQR----HY 120

Query: 121 VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM 180
           +GE+ + +SL++LQ+LEQQL+ ALK IRS+KNQLM+ES++ L +KEK +QE+N+ L+K +
Sbjct: 121 LGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQI 180

Query: 181 MENDKKV-VEQQKDEQNPSQVFMLSASNPFQFPS-----------LTIGGAYHEMRELQM 235
            E +  +  +Q + EQ    V  +    PFQ P            L +GG Y E  +  M
Sbjct: 181 KERENILRTKQTQCEQLNRSVDDVPQPQPFQHPHLYMIAHQTSPFLNMGGLYQEEDQTAM 240

[Close]

BLAST of Spo11859.1 vs. TAIR (Arabidopsis)
Match: AT5G60910.1 (AGAMOUS-like 8)

HSP 1 Score: 222.2 bits (565), Expect = 3.600e-58
Identity = 136/249 (54.62%), Postives = 175/249 (70.28%), Query Frame = 1


		  
Query: 1   MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST 60
           MGRG+V+LKRIENKI+RQVTFSKRRSGLLKKAHEISVLCDAEVALIVFS+KGKLFEY ST
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEY-ST 60

Query: 61  DSSSMEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLEVLERNMRAHIRHY 120
           D S ME+ILERY+RY Y+++QLV  D    Q  +W +E+ KL +++EVLE+N     R++
Sbjct: 61  D-SCMERILERYDRYLYSDKQLVGRD--VSQSENWVLEHAKLKARVEVLEKNK----RNF 120

Query: 121 VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM 180
           +GED D+LSL+ELQ LE QLD A+K IRS+KNQ M ESIS L KK+KA+Q+ NN L K +
Sbjct: 121 MGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKI 180

Query: 181 MENDKKVVEQQKDEQNPSQVFMLSASNPFQFPSLTIGGAYHEMRELQMESANLEAQGPSR 240
            E +KK  +Q+       Q+   S S+    P   +  +     E ++   N  A   + 
Sbjct: 181 KEREKKTGQQE------GQLVQCSNSSSVLLPQYCVTSSRDGFVE-RVGGENGGASSLTE 234

Query: 241 TNTNIPAWM 250
            N+ +PAWM
Sbjct: 241 PNSLLPAWM 234

[Close]

BLAST of Spo11859.1 vs. TAIR (Arabidopsis)
Match: AT3G30260.1 (AGAMOUS-like 79)

HSP 1 Score: 190.3 bits (482), Expect = 1.500e-48
Identity = 128/265 (48.30%), Postives = 164/265 (61.89%), Query Frame = 1


		  
Query: 1   MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST 60
           MGRG+V+L+RIENKI RQVTFSKRR+GL+KKA EISVLCDAEVALIVFS KGKLFEY++ 
Sbjct: 1   MGRGRVQLRRIENKIRRQVTFSKRRTGLVKKAQEISVLCDAEVALIVFSPKGKLFEYSA- 60

Query: 61  DSSSMEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLEVLERNMRAHIRHY 120
             SSME+IL+RYER  YA + +  P+ +SQ  G  + E  KL+  ++VL+R+    +RH 
Sbjct: 61  -GSSMERILDRYERSAYAGQDIPTPNLDSQ--GECSTECSKLLRMIDVLQRS----LRHL 120

Query: 121 VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM 180
            GE+ D LS+R+LQ +E QLD ALK+ RS+KNQLM ESI+QL KKEK ++E   QL+K  
Sbjct: 121 RGEEVDGLSIRDLQGVEMQLDTALKKTRSRKNQLMVESIAQLQKKEKELKELKKQLTK-- 180

Query: 181 MENDKKVVEQQKDEQNPSQVFMLSASNPFQFPSLTIGGAYHEMREL-------------- 240
               K    +    QN S      A+ PF+ P        HE+R                
Sbjct: 181 ----KAGEREDFQTQNLSHDLASLATPPFESP--------HELRRTISPPPPPLSSGDTS 240

Query: 241 QMESANLEAQGP--SRTNTNIPAWM 250
           Q +     A G    RTN  +P WM
Sbjct: 241 QRDGVGEVAAGTLIRRTNATLPHWM 243

[Close]

BLAST of Spo11859.1 vs. TAIR (Arabidopsis)
Match: AT2G03710.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 154.1 bits (388), Expect = 1.200e-37
Identity = 103/269 (38.29%), Postives = 156/269 (57.99%), Query Frame = 1


		  
Query: 1   MGRGKVELKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYAST 60
           MGRGKVELKRIENKI+RQVTF+KRR+GLLKKA+E+SVLCDAE+AL++FS +GKL+E+ S+
Sbjct: 1   MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60

Query: 61  DSSSMEKILERYERYCYAERQLVAPDSESQQEGSWAMEYPKLVSKLEVLERNMRAHIRHY 120
             S M + +++Y ++ YA    + P+  ++       +Y KL S++E+L+ +     RH 
Sbjct: 61  -PSGMARTVDKYRKHSYA---TMDPNQSAKDLQDKYQDYLKLKSRVEILQHSQ----RHL 120

Query: 121 VGEDTDALSLRELQHLEQQLDVALKRIRSKKNQLMHESISQLNKKEKAMQEQNNQLSKLM 180
           +GE+   + + EL+HLE+Q+D +L++IRS K + M + +S L  KE+ + E N  L + +
Sbjct: 121 LGEELSEMDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLRRKL 180

Query: 181 MEND---------KKVVEQQKDEQNPSQVFMLSASNPFQFPSLTIGGAYHEMR---ELQM 240
            ++D             EQQ+  Q   Q      SN    P +   G +  ++    LQM
Sbjct: 181 EDSDAALTQSFWGSSAAEQQQQHQQQQQGMSSYQSN----PPIQEAGFFKPLQGNVALQM 240

Query: 241 ES------ANLEAQGPSRTNTN--IPAWM 250
            S      AN      +  N N   P WM
Sbjct: 241 SSHYNHNPANATNSATTSQNVNGFFPGWM 257

The following BLAST results are available for this feature:

BLAST of Spo11859.1 vs. NCBI nr
BLAST of Spo11859.1 vs. UniProtKB/TrEMBL
BLAST of Spo11859.1 vs. ExPASy Swiss-Prot
BLAST of Spo11859.1 vs. TAIR (Arabidopsis)

BLAST of Spo11859.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902169680\|gb\|KNA07693.1\|	1.1e-130	98.0	hypothetical protein SOVF_1695...	[more]
gi\|902169681\|gb\|KNA07694.1\|	8.1e-129	97.6	hypothetical protein SOVF_1695...	[more]
gi\|731316954\|ref\|XP_010666772.1\|	7.1e-93	76.6	PREDICTED: truncated transcrip...	[more]
gi\|32478049\|gb\|AAP83386.1\|	3.2e-69	67.2	FRUITFULL-like MADS-box [Phyto...	[more]
gi\|548580073\|gb\|AGX01541.1\|	7.2e-69	63.1	FRUITFULL-like protein, partia...	[more]

BLAST of Spo11859.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QLY8_SPIOL	7.9e-131	98.0	Uncharacterized protein OS=Spi...	[more]
A0A0K9QKC7_SPIOL	5.6e-129	97.6	Uncharacterized protein OS=Spi...	[more]
Q7XBL4_PHYAM	2.3e-69	67.2	FRUITFULL-like MADS-box (Fragm...	[more]
U3RE74_9MAGN	5.0e-69	63.1	FRUITFULL-like protein (Fragme...	[more]
K4BC73_SOLLC	8.6e-69	61.1	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo11859.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
AGL8_SOLTU	5.2e-67	57.6	Agamous-like MADS-box protein ...	[more]
AP1_SINAL	9.1e-64	57.6	Floral homeotic protein APETAL...	[more]
2AP1_BRAOT	1.0e-62	56.3	Floral homeotic protein APETAL...	[more]
AP1A_BRAOA	1.0e-62	56.3	Floral homeotic protein APETAL...	[more]
AP1A_BRAOB	1.0e-62	56.3	Floral homeotic protein APETAL...	[more]

BLAST of Spo11859.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G69120.1	9.7e-64	59.2	K-box region and MADS-box tran...	[more]
AT1G26310.1	5.3e-62	55.6	K-box region and MADS-box tran...	[more]
AT5G60910.1	3.6e-58	54.6	AGAMOUS-like 8	[more]
AT3G30260.1	1.5e-48	48.3	AGAMOUS-like 79	[more]
AT2G03710.1	1.2e-37	38.2	K-box region and MADS-box tran...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 23..38 score: 1.9E-31coord: 3..23 score: 1.9E-31coord: 38..59 score: 1.9
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 score: 4.7
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 score: 1.3
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57 scor
IPR002100	Transcription factor, MADS-box	PROFILE	PS50066	MADS_BOX_2	coord: 1..61 score: 32
IPR002100	Transcription factor, MADS-box	unknown	SSF55455	SRF-like	coord: 2..90 score: 1.57
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 87..178 score: 2.0
IPR002487	Transcription factor, K-box	PROFILE	PS51297	K_BOX	coord: 96..193 score: 13
None	No IPR available	unknown	Coil	Coil	coord: 133..153 score: -coord: 155..182 scor
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 2..250 score: 6.5E
None	No IPR available	PANTHER	PTHR11945:SF155	AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATED	coord: 2..250 score: 6.5E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo15323	0.68	Barchart \| Table