Spo11830 (gene)

Overview
NameSpo11830
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPentatricopeptide repeat-containing protein, putative
Locationchr2 : 45294376 .. 45296009 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACTCGGATGGAATCGGATCGGATCGGTTGACCGAAATCGACAGGCCATCTTTGAGTGTTTGCGAGTTGCGACCAGATAAACCAGTAAGTCAATAACCAATCGTCCTCCATTACTAAGAGTTTATGATTCTATGAACTCGCACTTTCACATTTCCATCCCCAGACCATCTGAATCTTCGTAAACCCTAATGACAACCCAGGATTTCCTAAAAACCCTGAAAACAGCAAAAAGAGCATTCCCATCAGCCATTTCTCAATCCCTAAACCATGAATTAACCCCCATTAAAACCCTCATCAATTCATCTTTCAACACCATTTCCTCTCCCTCAAAAACCCCATCTTCCCATTCCACCATTTCATCTTTCCTTTCTTCTCTCTCCTCCCATCAACTCCACTCTTTTCTCTCTGACCCATCTGTCAAAACCTATGATTGTTTGAGAATCTTCAACATTGTTCTCCACTATCAATCAGACCTTTCCTTTAAGCCTGATATTCATGCCCATTTCACCCTAATTTGCAGGCTTATCAAATCCAGGTTGTATTCGGATGCTGAAGTTTTGTTGCAGAAATTCATTCTTGGTGCAAATTACAGGTACCCTTTTCCTGATTTTACCAATTGGGTTGCTTTAAATTAGTTGTATTCTGATACTCAAATGTTTGTTCTTGGTGCAAATTACAGGTACCCTTTTTGTGATTTTACAAATTGGGTTGAGAATTACTGTAAGGAATCGAGAATTATTACTAAGTTGTTGAATATGTTGCTTAAACTGTATTCTGATCATCAAATGTTTGATATGGCTGTTACTGCGTTTGAGTATATGGTGGACAGAGAAATTGAGAGGGATGAGAAAACTTGTTCTGTTCATTTACATGCTTTGGTTAAGGCTAATAAGGTTGATTTGGGTTTTGAGTTTCTTCGTCGAATGGTAGATTCGGGCATGGAGGTTTCTGTGTTCTCATTGACAATTGTTGTGAGTGGGTTGTGTGGGATTGGGGAGTTGAAGATGGGTAGAGAATTGGTGGAAGAGATGGTTGGGATGGGGGTAAGACCTAATGTTATAACATTCAATACATTAGTGGATGCATGTTCAAGAAGATGGGATTTCACAGAGTTGGATTTGGTGTTGTGTTTGATGGGAAGAGAAGGAGTCCCGTTTAACGACATGACGTATAAGCTGTTGATTGAGGGGTATTCGGGTTCTGGTAAGGTTGATGAAGCAAAGAGGTTGCTTTTGGAGATGCAGGACAAAGATTTCGACGTGGAGACGTATCTGTATTATAGCATCATTAGAGGGTATTGTAGATTGGGAAATACAAGCAGTGGTTTTTCATTACTTAAAACAATGCAAGAGAAGGACATTTCCCCTTGTGATGGTACTTATTGGTGTTTGATCAGTGGCATGTGTAAGGTTGGGGATATGGGTCAGGTGAAAGAATTGGTAAATGAGTTTCTAAAAAAGGGAGGTGAGGTGAACGATTGTATGCTTAATGAGTTAGTAAATGGATATCAAAAAACTGGAATAATGGATGAACTTGATGAATTAAAGTGTTTGGTGAAAATGAGTTCACCCAAGAATCTTGTCAGAACTCCATTGATCCTGATCCCAAAGCTTAGTCAATACGGAGTATATTGA

mRNA sequence

AACTCGGATGGAATCGGATCGGATCGGTTGACCGAAATCGACAGGCCATCTTTGAGTGTTTGCGAGTTGCGACCAGATAAACCAGTAAGTCAATAACCAATCGTCCTCCATTACTAAGAGTTTATGATTCTATGAACTCGCACTTTCACATTTCCATCCCCAGACCATCTGAATCTTCGTAAACCCTAATGACAACCCAGGATTTCCTAAAAACCCTGAAAACAGCAAAAAGAGCATTCCCATCAGCCATTTCTCAATCCCTAAACCATGAATTAACCCCCATTAAAACCCTCATCAATTCATCTTTCAACACCATTTCCTCTCCCTCAAAAACCCCATCTTCCCATTCCACCATTTCATCTTTCCTTTCTTCTCTCTCCTCCCATCAACTCCACTCTTTTCTCTCTGACCCATCTGTCAAAACCTATGATTGTTTGAGAATCTTCAACATTGTTCTCCACTATCAATCAGACCTTTCCTTTAAGCCTGATATTCATGCCCATTTCACCCTAATTTGCAGGCTTATCAAATCCAGGTTGTATTCGGATGCTGAAGTTTTGTTGCAGAAATTCATTCTTGGTGCAAATTACAGGTACCCTTTTTGTGATTTTACAAATTGGGTTGAGAATTACTGTAAGGAATCGAGAATTATTACTAAGTTGTTGAATATGTTGCTTAAACTGTATTCTGATCATCAAATGTTTGATATGGCTGTTACTGCGTTTGAGTATATGGTGGACAGAGAAATTGAGAGGGATGAGAAAACTTGTTCTGTTCATTTACATGCTTTGGTTAAGGCTAATAAGGTTGATTTGGGTTTTGAGTTTCTTCGTCGAATGGTAGATTCGGGCATGGAGGTTTCTGTGTTCTCATTGACAATTGTTGTGAGTGGGTTGTGTGGGATTGGGGAGTTGAAGATGGGTAGAGAATTGGTGGAAGAGATGGTTGGGATGGGGGTAAGACCTAATGTTATAACATTCAATACATTAGTGGATGCATGTTCAAGAAGATGGGATTTCACAGAGTTGGATTTGGTGTTGTGTTTGATGGGAAGAGAAGGAGTCCCGTTTAACGACATGACGTATAAGCTGTTGATTGAGGGGTATTCGGGTTCTGGTAAGGTTGATGAAGCAAAGAGGTTGCTTTTGGAGATGCAGGACAAAGATTTCGACGTGGAGACGTATCTGTATTATAGCATCATTAGAGGGTATTGTAGATTGGGAAATACAAGCAGTGGTTTTTCATTACTTAAAACAATGCAAGAGAAGGACATTTCCCCTTGTGATGGTACTTATTGGTGTTTGATCAGTGGCATGTGTAAGGTTGGGGATATGGGTCAGGTGAAAGAATTGGTAAATGAGTTTCTAAAAAAGGGAGGTGAGGTGAACGATTGTATGCTTAATGAGTTAGTAAATGGATATCAAAAAACTGGAATAATGGATGAACTTGATGAATTAAAGTGTTTGGTGAAAATGAGTTCACCCAAGAATCTTGTCAGAACTCCATTGATCCTGATCCCAAAGCTTAGTCAATACGGAGTATATTGA

Coding sequence (CDS)

ATGACAACCCAGGATTTCCTAAAAACCCTGAAAACAGCAAAAAGAGCATTCCCATCAGCCATTTCTCAATCCCTAAACCATGAATTAACCCCCATTAAAACCCTCATCAATTCATCTTTCAACACCATTTCCTCTCCCTCAAAAACCCCATCTTCCCATTCCACCATTTCATCTTTCCTTTCTTCTCTCTCCTCCCATCAACTCCACTCTTTTCTCTCTGACCCATCTGTCAAAACCTATGATTGTTTGAGAATCTTCAACATTGTTCTCCACTATCAATCAGACCTTTCCTTTAAGCCTGATATTCATGCCCATTTCACCCTAATTTGCAGGCTTATCAAATCCAGGTTGTATTCGGATGCTGAAGTTTTGTTGCAGAAATTCATTCTTGGTGCAAATTACAGGTACCCTTTTTGTGATTTTACAAATTGGGTTGAGAATTACTGTAAGGAATCGAGAATTATTACTAAGTTGTTGAATATGTTGCTTAAACTGTATTCTGATCATCAAATGTTTGATATGGCTGTTACTGCGTTTGAGTATATGGTGGACAGAGAAATTGAGAGGGATGAGAAAACTTGTTCTGTTCATTTACATGCTTTGGTTAAGGCTAATAAGGTTGATTTGGGTTTTGAGTTTCTTCGTCGAATGGTAGATTCGGGCATGGAGGTTTCTGTGTTCTCATTGACAATTGTTGTGAGTGGGTTGTGTGGGATTGGGGAGTTGAAGATGGGTAGAGAATTGGTGGAAGAGATGGTTGGGATGGGGGTAAGACCTAATGTTATAACATTCAATACATTAGTGGATGCATGTTCAAGAAGATGGGATTTCACAGAGTTGGATTTGGTGTTGTGTTTGATGGGAAGAGAAGGAGTCCCGTTTAACGACATGACGTATAAGCTGTTGATTGAGGGGTATTCGGGTTCTGGTAAGGTTGATGAAGCAAAGAGGTTGCTTTTGGAGATGCAGGACAAAGATTTCGACGTGGAGACGTATCTGTATTATAGCATCATTAGAGGGTATTGTAGATTGGGAAATACAAGCAGTGGTTTTTCATTACTTAAAACAATGCAAGAGAAGGACATTTCCCCTTGTGATGGTACTTATTGGTGTTTGATCAGTGGCATGTGTAAGGTTGGGGATATGGGTCAGGTGAAAGAATTGGTAAATGAGTTTCTAAAAAAGGGAGGTGAGGTGAACGATTGTATGCTTAATGAGTTAGTAAATGGATATCAAAAAACTGGAATAATGGATGAACTTGATGAATTAAAGTGTTTGGTGAAAATGAGTTCACCCAAGAATCTTGTCAGAACTCCATTGATCCTGATCCCAAAGCTTAGTCAATACGGAGTATATTGA

Protein sequence

MTTQDFLKTLKTAKRAFPSAISQSLNHELTPIKTLINSSFNTISSPSKTPSSHSTISSFLSSLSSHQLHSFLSDPSVKTYDCLRIFNIVLHYQSDLSFKPDIHAHFTLICRLIKSRLYSDAEVLLQKFILGANYRYPFCDFTNWVENYCKESRIITKLLNMLLKLYSDHQMFDMAVTAFEYMVDREIERDEKTCSVHLHALVKANKVDLGFEFLRRMVDSGMEVSVFSLTIVVSGLCGIGELKMGRELVEEMVGMGVRPNVITFNTLVDACSRRWDFTELDLVLCLMGREGVPFNDMTYKLLIEGYSGSGKVDEAKRLLLEMQDKDFDVETYLYYSIIRGYCRLGNTSSGFSLLKTMQEKDISPCDGTYWCLISGMCKVGDMGQVKELVNEFLKKGGEVNDCMLNELVNGYQKTGIMDELDELKCLVKMSSPKNLVRTPLILIPKLSQYGVY
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo11830.1Spo11830.1mRNA


Homology
BLAST of Spo11830.1 vs. NCBI nr
Match: gi|731355371|ref|XP_010689107.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g28050 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 649.4 bits (1674), Expect = 4.500e-183
Identity = 321/430 (74.65%), Postives = 371/430 (86.28%), Query Frame = 1

		  

Query: 1   MTTQDFLKTLKTAKRAFPSAISQSLNHELTPIKTLINSSFNTISSPSKTPSSHSTISSFL 60
           M TQ+FLKTLKTAKRAFPS IS SLN+ELTPI TLINS+F+T+SSP      H TISSFL
Sbjct: 1   MPTQEFLKTLKTAKRAFPSTISSSLNYELTPINTLINSAFDTVSSP------HHTISSFL 60

Query: 61  SSLSSHQLHSFLSDPSVKTYDCLRIFNIVLHYQSDLSFKPDIHAHFTLICRLIKSRLYSD 120
           SSLSSHQL SFLSDP+VKTYDCLRIFNIVLH QSDLSFKPD HAHFT+ICRLIKSRL+SD
Sbjct: 61  SSLSSHQLISFLSDPNVKTYDCLRIFNIVLHNQSDLSFKPDFHAHFTVICRLIKSRLFSD 120

Query: 121 AEVLLQKFILGANYRYPFCDFTNWVENYCKESRIITKLLNMLLKLYSDHQMFDMAVTAFE 180
           AE LL+K +LG NYRYPF DFT+WVENYCKES+IITKLLNMLLK+YSDH MFDM +T FE
Sbjct: 121 AEFLLKKLLLGPNYRYPFSDFTSWVENYCKESKIITKLLNMLLKMYSDHHMFDMVITVFE 180

Query: 181 YMVDREIERDEKTCSVHLHALVKANKVDLGFEFLRRMVDSGMEVSVFSLTIVVSGLCGIG 240
           YMV++E+ERDE+TCSVHL+AL+K +KVDL FEF RRMVDSGMEVSVFSLTIVVSGLC IG
Sbjct: 181 YMVEKEVERDERTCSVHLYALIKTDKVDLAFEFFRRMVDSGMEVSVFSLTIVVSGLCDIG 240

Query: 241 ELKMGRELVEEMVGMGVRPNVITFNTLVDACSRRWDFTELDLVLCLMGREGVPFNDMTYK 300
           ELK+ RELVEEM+  GVRPNV+T NTL+DACSRRW+F ELD+VLCLM REG+ FND TYK
Sbjct: 241 ELKIARELVEEMIKKGVRPNVVTVNTLIDACSRRWEFEELDVVLCLMEREGIEFNDTTYK 300

Query: 301 LLIEGYSGSGKVDEAKRLLLEMQDKDFDVETYLYYSIIRGYCRLGNTSSGFSLLKTMQEK 360
           LLIEGYSG GKVDEA++LLLEMQDKD + E +LY  +I+GYCRLG+ SSG++LL+ MQE+
Sbjct: 301 LLIEGYSGFGKVDEARKLLLEMQDKDIEAEVHLYDMVIKGYCRLGDISSGYALLRKMQEE 360

Query: 361 DISPCDGTYWCLISGMCKVGDMGQVKELVNEFL-KKGGEVNDCMLNELVNGYQKTGIMDE 420
           DI PC   Y CLI  MCK   M QVKELV+E L  +GGE+ND +LN LV+GYQK G++DE
Sbjct: 361 DIGPCGDIYTCLIGAMCKFRVMDQVKELVDELLNNEGGELNDVVLNALVDGYQKVGMVDE 420

Query: 421 LDELKCLVKM 430
           L+E+K +VK+
Sbjct: 421 LEEVKRMVKV 424

BLAST of Spo11830.1 vs. NCBI nr
Match: gi|902132726|gb|KNA04329.1| (hypothetical protein SOVF_200640 [Spinacia oleracea])

HSP 1 Score: 573.9 bits (1478), Expect = 2.400e-160
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 1

		  

Query: 171 MFDMAVTAFEYMVDREIERDEKTCSVHLHALVKANKVDLGFEFLRRMVDSGMEVSVFSLT 230
           MFDMAVTAFEYMVDREIERDEKTCSVHLHALVKANKVDLGFEFLRRMVDSGMEVSVFSLT
Sbjct: 1   MFDMAVTAFEYMVDREIERDEKTCSVHLHALVKANKVDLGFEFLRRMVDSGMEVSVFSLT 60

Query: 231 IVVSGLCGIGELKMGRELVEEMVGMGVRPNVITFNTLVDACSRRWDFTELDLVLCLMGRE 290
           IVVSGLCGIGELKMGRELVEEMVGMGVRPNVITFNTLVDACSRRWDFTELDLVLCLMGRE
Sbjct: 61  IVVSGLCGIGELKMGRELVEEMVGMGVRPNVITFNTLVDACSRRWDFTELDLVLCLMGRE 120

Query: 291 GVPFNDMTYKLLIEGYSGSGKVDEAKRLLLEMQDKDFDVETYLYYSIIRGYCRLGNTSSG 350
           GVPFNDMTYKLLIEGYSGSGKVDEAKRLLLEMQDKDFDVETYLYYSIIRGYCRLGNTSSG
Sbjct: 121 GVPFNDMTYKLLIEGYSGSGKVDEAKRLLLEMQDKDFDVETYLYYSIIRGYCRLGNTSSG 180

Query: 351 FSLLKTMQEKDISPCDGTYWCLISGMCKVGDMGQVKELVNEFLKKGGEVNDCMLNELVNG 410
           FSLLKTMQEKDISPCDGTYWCLISGMCKVGDMGQVKELVNEFLKKGGEVNDCMLNELVNG
Sbjct: 181 FSLLKTMQEKDISPCDGTYWCLISGMCKVGDMGQVKELVNEFLKKGGEVNDCMLNELVNG 240

Query: 411 YQKTGIMDELDELKCLVKMSSPKNLVRTPLILIPKLSQYGVY 453
           YQKTGIMDELDELKCLVKMSSPKNLVRTPLILIPKLSQYGVY
Sbjct: 241 YQKTGIMDELDELKCLVKMSSPKNLVRTPLILIPKLSQYGVY 282

BLAST of Spo11830.1 vs. NCBI nr
Match: gi|590590760|ref|XP_007016826.1| (Pentatricopeptide repeat-containing protein, putative [Theobroma cacao])

HSP 1 Score: 368.6 bits (945), Expect = 1.500e-98
Identity = 193/424 (45.52%), Postives = 274/424 (64.62%), Query Frame = 1

		  

Query: 1   MTTQDFLKTLKTAKRAFPSAISQSLNHELTPIKTLINSSFNTISSPSKTPSSHSTISSFL 60
           MT Q+FLKTLKT K+++PS +S        P+   I S F T S P          +S +
Sbjct: 95  MTLQNFLKTLKTVKKSYPSGLSSK---PYQPLPDFI-SQFLTTSKPLD--------ASTI 154

Query: 61  SSLSSHQLHSFLSDPSVKTYDCLRIFNIVLHYQSDLSFKPDIHAHFTLICRLIKSRLYSD 120
           S L+    H  L++P +K   C R FN+V+  QS +SFKPD+ AH TL CRL+K+RL+SD
Sbjct: 155 SDLNPTTFHDILTNPDLKASKCFRFFNLVIKNQSLVSFKPDLQAHLTLTCRLLKARLFSD 214

Query: 121 AEVLLQKFILGANYRYPFCDFTNWVENYCKESRIITKLLNMLLKLYSDHQMFDMAVTAFE 180
           AE +L+   +  + RYPF    + VEN C ES++ITK  N++LK+YSD+  F   +  F+
Sbjct: 215 AEAMLKSVSVDESLRYPFLVIASAVENCCFESKVITKFYNLMLKVYSDNGKFGEVLKTFD 274

Query: 181 YMVDREIERDEKTCSVHLHALVKANKVDLGFEFLRRMVDSGMEVSVFSLTIVVSGLCGIG 240
           YM +  I+ DE+TC+VHL AL  A+++ L   F   MV++G+E+SV+SLT VV GLC  G
Sbjct: 275 YMKNNGIKIDERTCTVHLIALKGADELGLALHFFYLMVETGIEISVYSLTAVVDGLCRNG 334

Query: 241 ELKMGRELVEEMVGMGVRPNVITFNTLVDACSRRWDFTELDLVLCLMGREGVPFNDMTYK 300
           ++K GRE+VEEM   G++ NVIT+N ++DAC++RWDF ELDLVL LM + GV FN  T+K
Sbjct: 335 DVKKGREIVEEMADRGIKANVITYNIMIDACAKRWDFEELDLVLGLMEKAGVEFNVETFK 394

Query: 301 LLIEGYSGSGKVDEAKRLLLEMQDKDFDVETYLYYSIIRGYCRLGNTSSGFSLLKTMQEK 360
            LI+GY+  GK++EA RL+ EM DK   V+TYLY  +I GYC+LG+  +   L   M  +
Sbjct: 395 FLIDGYTSYGKINEAGRLIGEMHDKGLKVDTYLYNLMINGYCKLGSIENVLLLFDRMSNR 454

Query: 361 DISPCDGTYWCLISGMCKVGDMGQVKELVNEFLKKGGEVNDCMLNELVNGYQKTGIMDEL 420
            + P   TYW LI+G  KVG+M    + VNE  KKG E++  M + L++ + + G++DE 
Sbjct: 455 GVKPNADTYWPLINGYSKVGEMEMAMKYVNEMQKKGFELDKVMYDMLIDRFCQNGMVDEA 506

Query: 421 DELK 425
            EL+
Sbjct: 515 FELR 506

BLAST of Spo11830.1 vs. NCBI nr
Match: gi|1009115988|ref|XP_015874534.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g28050 [Ziziphus jujuba])

HSP 1 Score: 366.3 bits (939), Expect = 7.600e-98
Identity = 200/423 (47.28%), Postives = 276/423 (65.25%), Query Frame = 1

		  

Query: 1   MTTQDFLKTLKTAKRAFPSAISQSLNHELTPIKTLINSSFNT-ISSPSKTPSSHSTISSF 60
           M+  +F++TLK AKR +             P + L+N    T +SSP+K   S ST  S 
Sbjct: 1   MSANNFVRTLKNAKRIYAPK----------PYQDLVNLLSKTPLSSPTKLLDSTST--SL 60

Query: 61  LSSLSSHQLHSFLSDPSVKTYDCLRIFNIVLHYQSDLSFKPDIHAHFTLICRLIKSRLYS 120
           L+ LS   L   LSDP++ +  CLR F+ +L  QS +SF+PDIHAH TLIC+L+K+R + 
Sbjct: 61  LAKLSPTTLRLILSDPNLTSSKCLRFFSFLLINQSSISFEPDIHAHITLICKLLKARNFP 120

Query: 121 DAEVLLQKFILGANYRYPFCDFTNWVENYCKESRIITKLLNMLLKLYSDHQMFDMAVTAF 180
           +AE L +   LG N  YPF  F++  E  C + RI  KLLN++LK+YSD   FD     F
Sbjct: 121 EAENLFRSASLGENSSYPFPVFSSASEICCYDPRIKAKLLNLMLKVYSDTGNFDEVSQTF 180

Query: 181 EYMVDREIERDEKTCSVHLHALVKANKVDLGFEFLRRMVDSGMEVSVFSLTIVVSGLCGI 240
           +YM    I+ DE+TC+ HL AL +A+KV +  +FL +MV +G+EVSV+SLT+VV GLC  
Sbjct: 181 DYMRSNGIKIDERTCTRHLLALKRADKVGVSLDFLYKMVKAGLEVSVYSLTVVVEGLCYN 240

Query: 241 GELKMGRELVEEMVGMGVRPNVITFNTLVDACSRRWDFTELDLVLCLMGREGVPFNDMTY 300
           GE++  RELVE+MVG G RPN+ITFN +VD+C++RW+F ELDLVL LM +EGV FN  TY
Sbjct: 241 GEIRRSRELVEDMVGRGTRPNIITFNKMVDSCAKRWNFDELDLVLLLMRKEGVEFNVKTY 300

Query: 301 KLLIEGYSGSGKVDEAKRLLLEMQDKDFDVETYLYYSIIRGYCRLGNTSSGFSLLKTMQE 360
            +LI+G+   GKV EA+ L+ +M D  F V+ +L+  +IRGY RLG   S FSLL  M E
Sbjct: 301 GILIDGFVSYGKVKEAQMLIHDMHDIGFKVDVHLFNLMIRGYSRLGFMDSAFSLLGEMAE 360

Query: 361 KDISPCDGTYWCLISGMCKVGDMGQVKELVNEFLKKGGEVNDCMLNELVNGYQKTGIMDE 420
           +++     TYW LISG+CK+G MGQ    ++E   KG E++D M N L+NG+   G++D+
Sbjct: 361 RNMFQNGDTYWGLISGLCKIGKMGQAMFYIDEMQNKGIELDDVMFNTLINGFCNKGMIDK 411

Query: 421 LDE 423
             E
Sbjct: 421 AFE 411

BLAST of Spo11830.1 vs. NCBI nr
Match: gi|645217510|ref|XP_008226176.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g28050 [Prunus mume])

HSP 1 Score: 352.1 bits (902), Expect = 1.500e-93
Identity = 189/427 (44.26%), Postives = 274/427 (64.17%), Query Frame = 1

		  

Query: 1   MTTQDFLKTLKTAKRAFPSAISQSLNHELTPIKTLINSSFNTISSPSKTPSSHSTISSFL 60
           M+ Q+ L+TL T KR       + +         LI+ + NT++S    P + +TIS  L
Sbjct: 1   MSFQNVLRTLNTVKRTPARPYQEFIE--------LISKTPNTVTSK---PLNTTTIS-LL 60

Query: 61  SSLSSHQLHSFLSDPSVKTYDCLRIFNIVLHYQSDLSFKPDIHAHFTLICRLIKSRLYSD 120
           S L  + L+  LSDP  K    L  FN +L  QS +SFK D+HAH TLICRL+++R +++
Sbjct: 61  SKLKPNSLNLILSDPKFKCSKSLLFFNFLLKNQSFISFKIDLHAHLTLICRLLRARKFTE 120

Query: 121 AEVLLQKFILGANYRYPFCDFTNWVENYCKESRIITKLLNMLLKLYSDHQMFDMAVTAFE 180
           AE + +   +  N RYPF    +  E  C E R+  KL N+++K+YSD + F+  +   +
Sbjct: 121 AEEIFKCISVDENSRYPFSVIASAAEICCLEPRVKAKLFNLMIKVYSDSESFNQVLETLD 180

Query: 181 YMVDREIERDEKTCSVHLHALVKANKVDLGFEFLRRMVDSGMEVSVFSLTIVVSGLCGIG 240
           +M    I+ DE+TC+VHL AL + ++V    +F  R+++SG +VSV+SLT+VV GLCG G
Sbjct: 181 FMKSNGIQIDERTCTVHLLALNRRDEVQKCLDFFYRLLESGTKVSVYSLTVVVDGLCGSG 240

Query: 241 ELKMGRELVEEMVGMGVRPNVITFNTLVDACSRRWDFTELDLVLCLMGREGVPFNDMTYK 300
           E++  RELVEEMV +G +PN+ITFNT+VDAC++RW+F ELDL+L +M +EGV F+  TY+
Sbjct: 241 EIRRSRELVEEMVRIGPKPNIITFNTIVDACAKRWNFPELDLILLVMEKEGVAFDIKTYQ 300

Query: 301 LLIEGYSGSGKVDEAKRLLLEMQDKDFDVETYLYYSIIRGYCRLGNTSSGFSLLKTMQEK 360
            LI+G++ SGKV+EA+RL+ EM DK   V T+ Y  II GYCRLG+  S  SL + M E+
Sbjct: 301 FLIDGFTSSGKVEEAERLVGEMHDKGLKVNTHSYNLIINGYCRLGSMESAHSLFRKMAER 360

Query: 361 DISPCDGTYWCLISGMCKVGDMGQVKELVNEFLKKGGEVNDCMLNELVNGYQKTGIMDEL 420
                  TYW LI+G CKVG MG   E +NE  KKG E+++ +LN L++G    G+ DE 
Sbjct: 361 STFQNADTYWALINGFCKVGAMGLAMEYLNEMQKKGIELDNVILNILIDGLCNKGMADEA 415

Query: 421 DELKCLV 428
            +L+ L+
Sbjct: 421 FQLQALM 415

BLAST of Spo11830.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BLN6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g205400 PE=4 SV=1)

HSP 1 Score: 649.4 bits (1674), Expect = 3.100e-183
Identity = 321/430 (74.65%), Postives = 371/430 (86.28%), Query Frame = 1

		  

Query: 1   MTTQDFLKTLKTAKRAFPSAISQSLNHELTPIKTLINSSFNTISSPSKTPSSHSTISSFL 60
           M TQ+FLKTLKTAKRAFPS IS SLN+ELTPI TLINS+F+T+SSP      H TISSFL
Sbjct: 1   MPTQEFLKTLKTAKRAFPSTISSSLNYELTPINTLINSAFDTVSSP------HHTISSFL 60

Query: 61  SSLSSHQLHSFLSDPSVKTYDCLRIFNIVLHYQSDLSFKPDIHAHFTLICRLIKSRLYSD 120
           SSLSSHQL SFLSDP+VKTYDCLRIFNIVLH QSDLSFKPD HAHFT+ICRLIKSRL+SD
Sbjct: 61  SSLSSHQLISFLSDPNVKTYDCLRIFNIVLHNQSDLSFKPDFHAHFTVICRLIKSRLFSD 120

Query: 121 AEVLLQKFILGANYRYPFCDFTNWVENYCKESRIITKLLNMLLKLYSDHQMFDMAVTAFE 180
           AE LL+K +LG NYRYPF DFT+WVENYCKES+IITKLLNMLLK+YSDH MFDM +T FE
Sbjct: 121 AEFLLKKLLLGPNYRYPFSDFTSWVENYCKESKIITKLLNMLLKMYSDHHMFDMVITVFE 180

Query: 181 YMVDREIERDEKTCSVHLHALVKANKVDLGFEFLRRMVDSGMEVSVFSLTIVVSGLCGIG 240
           YMV++E+ERDE+TCSVHL+AL+K +KVDL FEF RRMVDSGMEVSVFSLTIVVSGLC IG
Sbjct: 181 YMVEKEVERDERTCSVHLYALIKTDKVDLAFEFFRRMVDSGMEVSVFSLTIVVSGLCDIG 240

Query: 241 ELKMGRELVEEMVGMGVRPNVITFNTLVDACSRRWDFTELDLVLCLMGREGVPFNDMTYK 300
           ELK+ RELVEEM+  GVRPNV+T NTL+DACSRRW+F ELD+VLCLM REG+ FND TYK
Sbjct: 241 ELKIARELVEEMIKKGVRPNVVTVNTLIDACSRRWEFEELDVVLCLMEREGIEFNDTTYK 300

Query: 301 LLIEGYSGSGKVDEAKRLLLEMQDKDFDVETYLYYSIIRGYCRLGNTSSGFSLLKTMQEK 360
           LLIEGYSG GKVDEA++LLLEMQDKD + E +LY  +I+GYCRLG+ SSG++LL+ MQE+
Sbjct: 301 LLIEGYSGFGKVDEARKLLLEMQDKDIEAEVHLYDMVIKGYCRLGDISSGYALLRKMQEE 360

Query: 361 DISPCDGTYWCLISGMCKVGDMGQVKELVNEFL-KKGGEVNDCMLNELVNGYQKTGIMDE 420
           DI PC   Y CLI  MCK   M QVKELV+E L  +GGE+ND +LN LV+GYQK G++DE
Sbjct: 361 DIGPCGDIYTCLIGAMCKFRVMDQVKELVDELLNNEGGELNDVVLNALVDGYQKVGMVDE 420

Query: 421 LDELKCLVKM 430
           L+E+K +VK+
Sbjct: 421 LEEVKRMVKV 424

BLAST of Spo11830.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QAN9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_200640 PE=4 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 1.700e-160
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 1

		  

Query: 171 MFDMAVTAFEYMVDREIERDEKTCSVHLHALVKANKVDLGFEFLRRMVDSGMEVSVFSLT 230
           MFDMAVTAFEYMVDREIERDEKTCSVHLHALVKANKVDLGFEFLRRMVDSGMEVSVFSLT
Sbjct: 1   MFDMAVTAFEYMVDREIERDEKTCSVHLHALVKANKVDLGFEFLRRMVDSGMEVSVFSLT 60

Query: 231 IVVSGLCGIGELKMGRELVEEMVGMGVRPNVITFNTLVDACSRRWDFTELDLVLCLMGRE 290
           IVVSGLCGIGELKMGRELVEEMVGMGVRPNVITFNTLVDACSRRWDFTELDLVLCLMGRE
Sbjct: 61  IVVSGLCGIGELKMGRELVEEMVGMGVRPNVITFNTLVDACSRRWDFTELDLVLCLMGRE 120

Query: 291 GVPFNDMTYKLLIEGYSGSGKVDEAKRLLLEMQDKDFDVETYLYYSIIRGYCRLGNTSSG 350
           GVPFNDMTYKLLIEGYSGSGKVDEAKRLLLEMQDKDFDVETYLYYSIIRGYCRLGNTSSG
Sbjct: 121 GVPFNDMTYKLLIEGYSGSGKVDEAKRLLLEMQDKDFDVETYLYYSIIRGYCRLGNTSSG 180

Query: 351 FSLLKTMQEKDISPCDGTYWCLISGMCKVGDMGQVKELVNEFLKKGGEVNDCMLNELVNG 410
           FSLLKTMQEKDISPCDGTYWCLISGMCKVGDMGQVKELVNEFLKKGGEVNDCMLNELVNG
Sbjct: 181 FSLLKTMQEKDISPCDGTYWCLISGMCKVGDMGQVKELVNEFLKKGGEVNDCMLNELVNG 240

Query: 411 YQKTGIMDELDELKCLVKMSSPKNLVRTPLILIPKLSQYGVY 453
           YQKTGIMDELDELKCLVKMSSPKNLVRTPLILIPKLSQYGVY
Sbjct: 241 YQKTGIMDELDELKCLVKMSSPKNLVRTPLILIPKLSQYGVY 282

BLAST of Spo11830.1 vs. UniProtKB/TrEMBL
Match: A0A061GX52_THECC (Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_042124 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.100e-98
Identity = 193/424 (45.52%), Postives = 274/424 (64.62%), Query Frame = 1

		  

Query: 1   MTTQDFLKTLKTAKRAFPSAISQSLNHELTPIKTLINSSFNTISSPSKTPSSHSTISSFL 60
           MT Q+FLKTLKT K+++PS +S        P+   I S F T S P          +S +
Sbjct: 95  MTLQNFLKTLKTVKKSYPSGLSSK---PYQPLPDFI-SQFLTTSKPLD--------ASTI 154

Query: 61  SSLSSHQLHSFLSDPSVKTYDCLRIFNIVLHYQSDLSFKPDIHAHFTLICRLIKSRLYSD 120
           S L+    H  L++P +K   C R FN+V+  QS +SFKPD+ AH TL CRL+K+RL+SD
Sbjct: 155 SDLNPTTFHDILTNPDLKASKCFRFFNLVIKNQSLVSFKPDLQAHLTLTCRLLKARLFSD 214

Query: 121 AEVLLQKFILGANYRYPFCDFTNWVENYCKESRIITKLLNMLLKLYSDHQMFDMAVTAFE 180
           AE +L+   +  + RYPF    + VEN C ES++ITK  N++LK+YSD+  F   +  F+
Sbjct: 215 AEAMLKSVSVDESLRYPFLVIASAVENCCFESKVITKFYNLMLKVYSDNGKFGEVLKTFD 274

Query: 181 YMVDREIERDEKTCSVHLHALVKANKVDLGFEFLRRMVDSGMEVSVFSLTIVVSGLCGIG 240
           YM +  I+ DE+TC+VHL AL  A+++ L   F   MV++G+E+SV+SLT VV GLC  G
Sbjct: 275 YMKNNGIKIDERTCTVHLIALKGADELGLALHFFYLMVETGIEISVYSLTAVVDGLCRNG 334

Query: 241 ELKMGRELVEEMVGMGVRPNVITFNTLVDACSRRWDFTELDLVLCLMGREGVPFNDMTYK 300
           ++K GRE+VEEM   G++ NVIT+N ++DAC++RWDF ELDLVL LM + GV FN  T+K
Sbjct: 335 DVKKGREIVEEMADRGIKANVITYNIMIDACAKRWDFEELDLVLGLMEKAGVEFNVETFK 394

Query: 301 LLIEGYSGSGKVDEAKRLLLEMQDKDFDVETYLYYSIIRGYCRLGNTSSGFSLLKTMQEK 360
            LI+GY+  GK++EA RL+ EM DK   V+TYLY  +I GYC+LG+  +   L   M  +
Sbjct: 395 FLIDGYTSYGKINEAGRLIGEMHDKGLKVDTYLYNLMINGYCKLGSIENVLLLFDRMSNR 454

Query: 361 DISPCDGTYWCLISGMCKVGDMGQVKELVNEFLKKGGEVNDCMLNELVNGYQKTGIMDEL 420
            + P   TYW LI+G  KVG+M    + VNE  KKG E++  M + L++ + + G++DE 
Sbjct: 455 GVKPNADTYWPLINGYSKVGEMEMAMKYVNEMQKKGFELDKVMYDMLIDRFCQNGMVDEA 506

Query: 421 DELK 425
            EL+
Sbjct: 515 FELR 506

BLAST of Spo11830.1 vs. UniProtKB/TrEMBL
Match: M5W147_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015514mg PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 3.000e-93
Identity = 175/375 (46.67%), Postives = 250/375 (66.67%), Query Frame = 1

		  

Query: 53  HSTISSFLSSLSSHQLHSFLSDPSVKTYDCLRIFNIVLHYQSDLSFKPDIHAHFTLICRL 112
           ++TI S LS L  + L+  LSDP  K   CL  FN +L  QS +SFK D+HAH TLICRL
Sbjct: 8   NTTIISLLSKLKPNFLNLILSDPKFKCSRCLLFFNFLLKNQSFISFKIDLHAHLTLICRL 67

Query: 113 IKSRLYSDAEVLLQKFILGANYRYPFCDFTNWVENYCKESRIITKLLNMLLKLYSDHQMF 172
           +K+R +++AE + +   +  N RYPF    +  E  C E R+  KL N+++K+YSD + F
Sbjct: 68  LKARKFTEAEEIFKCISVDENSRYPFSVIASAAEICCLEPRVKAKLFNLMIKVYSDSENF 127

Query: 173 DMAVTAFEYMVDREIERDEKTCSVHLHALVKANKVDLGFEFLRRMVDSGMEVSVFSLTIV 232
                  ++M    I+ DE+TC+VHL AL + ++V  G +F  R+++SG +VSV+SLT++
Sbjct: 128 KQVFETLDFMKSNGIQIDERTCTVHLLALNRRDEVQKGLDFFYRLLESGTKVSVYSLTVM 187

Query: 233 VSGLCGIGELKMGRELVEEMVGMGVRPNVITFNTLVDACSRRWDFTELDLVLCLMGREGV 292
           V GLC  GE+K  RELVEEMV +G +PN+ITFNT+VDAC++RW+F ELDL+L +M +EG+
Sbjct: 188 VDGLCRSGEIKRSRELVEEMVSIGTKPNIITFNTIVDACAKRWNFPELDLILLVMEKEGM 247

Query: 293 PFNDMTYKLLIEGYSGSGKVDEAKRLLLEMQDKDFDVETYLYYSIIRGYCRLGNTSSGFS 352
            F+  TY+ LI+G++ SGKV+EA+RL+ EM DK   V T+ Y  II GYCRLG+  S  S
Sbjct: 248 AFDIKTYQFLIDGFASSGKVEEAERLVGEMHDKGLKVNTHSYNLIINGYCRLGSMESAHS 307

Query: 353 LLKTMQEKDISPCDGTYWCLISGMCKVGDMGQVKELVNEFLKKGGEVNDCMLNELVNGYQ 412
           L + M E+       TYW LI+G CKVG +G   E +NE  KKG E+++ +LN L++G  
Sbjct: 308 LFRKMAERSTFQNADTYWALINGFCKVGALGLAMEYLNEMQKKGIELDNVILNILIDGLC 367

Query: 413 KTGIMDELDELKCLV 428
             G+ DE  +L+ L+
Sbjct: 368 NKGMADEAFQLQALM 382

BLAST of Spo11830.1 vs. UniProtKB/TrEMBL
Match: A0A0D2QDH4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G110100 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 1.400e-90
Identity = 187/432 (43.29%), Postives = 265/432 (61.34%), Query Frame = 1

		  

Query: 1   MTTQDFLKTLKTAKRAFPSAISQS--------LNHELTPIKTLINSSFNTISSPSKTPSS 60
           MT Q+FL TLKT K++  S +S          ++H L P   L  S+      PS TP++
Sbjct: 1   MTLQNFLNTLKTVKKSSASTLSPKHFQHLPDFISHFLKPATPLDASAL-----PSLTPTT 60

Query: 61  HSTISSFLSSLSSHQLHSFLSDPSVKTYDCLRIFNIVLHYQSDLSFKPDIHAHFTLICRL 120
              I               LS+P +K   C R FN V + QS LSFKP +  H  LICRL
Sbjct: 61  FRDI---------------LSNPDLKASKCFRFFNFVANNQSLLSFKPHLQDHLILICRL 120

Query: 121 IKSRLYSDAEVLLQKFILGANYRYPFCDFTNWVENYCKESRIITKLLNMLLKLYSDHQMF 180
           +K+RL++DAE +L+   +  N RYPF    + VEN C ES++ TKL N +LK+YSD+  F
Sbjct: 121 LKARLFADAEAMLKTLSVDENLRYPFLVIASAVENCCFESKVTTKLFNFMLKVYSDNGNF 180

Query: 181 DMAVTAFEYMVDREIERDEKTCSVHLHALVKANKVDLGFEFLRRMVDSGMEVSVFSLTIV 240
             A   F+YM D  I+ +E+TC+VHL+ L KA+++ L  +F  +MV SG+E+SV+SLT V
Sbjct: 181 SEASKTFDYMKDNGIKINERTCTVHLNTLKKADELGLVLDFFGQMVQSGLEISVYSLTCV 240

Query: 241 VSGLCGIGELKMGRELVEEMVGMGVRPNVITFNTLVDACSRRWDFTELDLVLCLMGREGV 300
           + G+C  G++K  RE++EEM G G++PNVITFN L+D+C +RWDF ELDLVL LM + GV
Sbjct: 241 IDGMCRNGDIKKAREIMEEMSGRGIKPNVITFNILIDSCVKRWDFEELDLVLGLMRKGGV 300

Query: 301 PFNDMTYKLLIEGYSGSGKVDEAKRLLLEMQDKDFDVETYLYYSIIRGYCRLGNTSSGFS 360
            FN  TYK LI+GYS   K++ A+RL++EM DK   V+TYLY  +I GYC+LG   S   
Sbjct: 301 GFNVETYKFLIDGYSSYWKIEAAERLVMEMHDKGLRVDTYLYNLMINGYCKLGAIESVLL 360

Query: 361 LLKTMQEKDISPCDGTYWCLISGMCKVGDMGQVKELVNEFLKKGGEVNDCMLNELVNGYQ 420
           LL  M+++ + P   T+  +I+   KVG M    + V E  K G E++  M + L++ + 
Sbjct: 361 LLGRMRDRGVKPNADTFCPIINWYSKVGGMEVAMKYVEEMQKMGFELDKVMYDMLIDRFC 412

Query: 421 KTGIMDELDELK 425
           + G+ DE  EL+
Sbjct: 421 QNGMADEAFELR 412

BLAST of Spo11830.1 vs. ExPASy Swiss-Prot
Match: PP174_ARATH (Pentatricopeptide repeat-containing protein At2g28050 OS=Arabidopsis thaliana GN=At2g28050 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.400e-75
Identity = 163/424 (38.44%), Postives = 252/424 (59.43%), Query Frame = 1

		  

Query: 1   MTTQDFLKTLKTAKRAFPSAISQSLNHELTPIKTLINSSF--NTISSPSKTPSSHSTISS 60
           MT Q FLKTLKTAK+ +  +I           K L+NSS    T++SP +TP        
Sbjct: 1   MTPQCFLKTLKTAKQTYTFSI----------YKLLLNSSSINQTLASP-ETP-------- 60

Query: 61  FLSSLSSHQLHSFLSDPSVKTYDCLRIFNIVLHYQSDLSFKPDIHAHFTLICRLIKSRLY 120
            LS L+   L   LSDP +K++ C+ +FN +L   S  SF+PD+  H +L  R++  R +
Sbjct: 61  -LSDLNLSTLRRILSDPDIKSWKCISLFNFILENPSLFSFQPDLRTHLSLTFRVLSERRF 120

Query: 121 SDAEVLLQKFILGANYRYPFCDFTNWVENYCK-ESRIITKLLNMLLKLYSDHQMFDMAVT 180
           S A+ LL+   +    RYPF    + V + C  E +++ +  N ++ +YSD+  F   V 
Sbjct: 121 SYAKELLKPVAIDDILRYPFNVIVSSVIDECGCEKKVVGRFFNSMIMVYSDNGKFSEVVE 180

Query: 181 AFEYMVDREIERDEKTCSVHLHALVKANKVDLGFEFLRRMVDSGMEV-SVFSLTIVVSGL 240
            FEYM + E++ DEKTC++HL  L + ++++L  +F   MV+SG++V +V+SLT+VV+ L
Sbjct: 181 VFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMVESGIDVVTVYSLTVVVTVL 240

Query: 241 CGIGELKMGRELVEEM-VGMGVRPNVITFNTLVDACSRRWDFTELDLVLCLMGREGVPFN 300
           C  GE+   RELVEEM +  GV+ N++TF +++  C +RWDF ELDLVL LM +E V  +
Sbjct: 241 CCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLD 300

Query: 301 DMTYKLLIEGYSGSGKVDEAKRLLLEMQDKDFDVETYLYYSIIRGYCRLGNTSSGFSLLK 360
             +YK+LI+G++  GKV+EA+RL+L M DK   VE+YLY  I+ GY R G       L  
Sbjct: 301 LDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYS 360

Query: 361 TMQEKDISPCDGTYWCLISGMCKVGDMGQVKELVNEFLKKGGEVNDCMLNELVNGYQKTG 420
            M  + ++P   TYW L++G+CK G + +    +NE      E+++ M + L     + G
Sbjct: 361 EMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVG 404

BLAST of Spo11830.1 vs. ExPASy Swiss-Prot
Match: PP180_ARATH (Pentatricopeptide repeat-containing protein At2g32630 OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 6.100e-63
Identity = 128/371 (34.50%), Postives = 219/371 (59.03%), Query Frame = 1

		  

Query: 58  SFLSSLSSHQLHSFLSDPSVKTYDCLRIFNIVLHYQSDLSFKPDIHAHFTLICRLIKSRL 117
           S L +L+S+     LS+P++ T  C+  F ++  ++S+L  KPD+ A  TL  RL  +R 
Sbjct: 55  SLLFNLNSNVTRLVLSEPTLPTQSCIDFFKLLREFESNL--KPDLTAVVTLSHRLYSNRR 114

Query: 118 YSDAEVLLQKFILGANYRYPF---------CDFTNWVENYCKESRIITKLLNMLLKLYSD 177
           +++   LL   +    Y+ P          CD +       ++     K  +++ ++Y D
Sbjct: 115 FNEMRSLLNSVVNDGFYKRPVEELGSAMVDCDISE------EKFEFFEKFFDLVFRVYVD 174

Query: 178 HQMFDMAVTAFEYMVDREIERDEKTCSVHLHALVKANKVDLGFEFLRRMVDSGMEVSVFS 237
           + MF+  +  F+YMV + +  DE++C V L A  K  ++DL  E  RRMVDSG++++V+S
Sbjct: 175 NGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYS 234

Query: 238 LTIVVSGLCGIGELKMGRELVEEMVGMGVRPNVITFNTLVDACSRRWDFTELDLVLCLMG 297
           LTIVV GLC  GE++  ++L++E    G++P   T+NT+++A  ++ DF+ ++ VL +M 
Sbjct: 235 LTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMK 294

Query: 298 REGVPFNDMTYKLLIEGYSGSGKVDEAKRLLLEMQDKDFDVETYLYYSIIRGYCRLGNTS 357
           ++GV +N +TY LL+E    +GK+ +A++L  EM+++  + + ++Y S+I   CR GN  
Sbjct: 295 KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMK 354

Query: 358 SGFSLLKTMQEKDISPCDGTYWCLISGMCKVGDMGQVKELVNEFLKKGGEVNDCMLNELV 417
             F L   + EK +SP   TY  LI G+CKVG+MG  + L+NE   KG  +   + N L+
Sbjct: 355 RAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLI 414

Query: 418 NGYQKTGIMDE 420
           +GY + G++DE
Sbjct: 415 DGYCRKGMVDE 417

BLAST of Spo11830.1 vs. ExPASy Swiss-Prot
Match: PP404_ARATH (Pentatricopeptide repeat-containing protein At5g38730 OS=Arabidopsis thaliana GN=At5g38730 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 7.000e-27
Identity = 88/334 (26.35%), Postives = 156/334 (46.71%), Query Frame = 1

		  

Query: 97  SFKPDIHAHFTLICRLIKSRLYSDAEVLLQKFILGANYRYPFCDFTNWVENYCKESRIIT 156
           S K  + + + +I  L K + +  A  LL K         P     + V    ++   ++
Sbjct: 75  SSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLV-LRSLVGGVSEDPEDVS 134

Query: 157 KLLNMLLKLYSDHQMFDMAVTAFEYMVDREIERDEKTCSVHLHALVKANKVDLGFEFLRR 216
            + + L+  Y+   M + ++  FE +    ++   + C+V L++LVK    D  ++  ++
Sbjct: 135 HVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKK 194

Query: 217 MVDSGMEVSVFSLTIVVSGLCGIGELKMGRELVEEMVGMGVRPNVITFNTLVDA-CSRRW 276
           MV  G+  ++    ++V      G+ +   +L+ EM   GV P++ T+NTL+   C +  
Sbjct: 195 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 254

Query: 277 DFTELDLVLCLMGREGVPFNDMTYKLLIEGYSGSGKVDEAKRLLLEMQDKDFDVETYLYY 336
            F  L  V   M R GV  N +TY   I G+S  G++ EA RL  E++D D       Y 
Sbjct: 255 HFEALS-VQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYT 314

Query: 337 SIIRGYCRLGNTSSGFSLLKTMQEKDISPCDGTYWCLISGMCKVGDMGQVKELVNEFLKK 396
           ++I GYCR+ +      L + M+ +  SP   TY  ++  +C+ G + +   L+ E   K
Sbjct: 315 TLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGK 374

Query: 397 GGEVNDCMLNELVNGYQKTGIMDELDELKCLVKM 430
             E ++   N L+N Y K  I D +  +K   KM
Sbjct: 375 KIEPDNITCNTLINAYCK--IEDMVSAVKVKKKM 403

BLAST of Spo11830.1 vs. ExPASy Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 7.000e-27
Identity = 102/405 (25.19%), Postives = 187/405 (46.17%), Query Frame = 1

		  

Query: 33  KTLINSSFNTISSPSKTPSSHSTISSFLSSLSSH--QLHSFLSDPSVKTYDCLRIFNIVL 92
           KTLI  S +T +S   +PS        L+ L  H  QLH   ++ + +        N++L
Sbjct: 5   KTLIRRSLSTFAS---SPSDSLLADKALTFLKRHPYQLHHLSANFTPEAAS-----NLLL 64

Query: 93  HYQSD----LSFK--PDIHAHFTLICRLI------KSRLYSDAEVLLQKFILGA-NYRYP 152
             Q+D    L F    + H  FTL C+ I      K +LY  A++L +       +  Y 
Sbjct: 65  KSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYA 124

Query: 153 FCDFTNWVENY--CKESRIITKLLNMLLKLYSDHQMFDMAVTAFEYMVDREIERDEKTCS 212
              F +  E Y  C  +   + + ++++K YS   + D A++               + +
Sbjct: 125 SLVFKSLQETYDLCYST---SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYN 184

Query: 213 VHLHALVKANK-VDLGFEFLRRMVDSGMEVSVFSLTIVVSGLCGIGELKMGRELVEEMVG 272
             L A +++ + +       + M++S +  +VF+  I++ G C  G + +   L ++M  
Sbjct: 185 AVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMET 244

Query: 273 MGVRPNVITFNTLVDACSRRWDFTELDLVLCLMGREGVPFNDMTYKLLIEGYSGSGKVDE 332
            G  PNV+T+NTL+D   +     +   +L  M  +G+  N ++Y ++I G    G++ E
Sbjct: 245 KGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE 304

Query: 333 AKRLLLEMQDKDFDVETYLYYSIIRGYCRLGNTSSGFSLLKTMQEKDISPCDGTYWCLIS 392
              +L EM  + + ++   Y ++I+GYC+ GN      +   M    ++P   TY  LI 
Sbjct: 305 VSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIH 364

Query: 393 GMCKVGDMGQVKELVNEFLKKGGEVNDCMLNELVNGYQKTGIMDE 420
            MCK G+M +  E +++   +G   N+     LV+G+ + G M+E
Sbjct: 365 SMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398

BLAST of Spo11830.1 vs. ExPASy Swiss-Prot
Match: PPR91_ARATH (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 1.600e-26
Identity = 89/338 (26.33%), Postives = 148/338 (43.79%), Query Frame = 1

		  

Query: 99  KPDIHAHFTLICRLIKSRLYSDAEVLLQKFILGANYRYPFCDFTNWVENYCKESRIIT-- 158
           +P++  + +LI  L     +SDA  LL   I           F+  ++ + KE +++   
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMI-ERKINPDVFTFSALIDAFVKEGKLVEAE 347

Query: 159 KLLNMLLKLYSD---------------HQMFDMAVTAFEYMVDREIERDEKTCSVHLHAL 218
           KL + ++K   D               H   D A   FE+MV +    D  T +  +   
Sbjct: 348 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 407

Query: 219 VKANKVDLGFEFLRRMVDSGMEVSVFSLTIVVSGLCGIGELKMGRELVEEMVGMGVRPNV 278
            K  +V+ G E  R M   G+  +  +  I++ GL   G+  M +E+ +EMV  GV PN+
Sbjct: 408 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 467

Query: 279 ITFNTLVDACSRRWDFTELDLVLCLMGREGVPFNDMTYKLLIEGYSGSGKVDEAKRLLLE 338
           +T+NTL+D   +     +  +V   + R  +     TY ++IEG   +GKV++   L   
Sbjct: 468 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 527

Query: 339 MQDKDFDVETYLYYSIIRGYCRLGNTSSGFSLLKTMQEKDISPCDGTYWCLISGMCKVGD 398
           +  K    +   Y ++I G+CR G+     +L K M+E    P  G Y  LI    + GD
Sbjct: 528 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 587

Query: 399 MGQVKELVNEFLKKGGEVNDCMLNELVNGYQKTGIMDE 420
                EL+ E ++  G   D     LV      G +D+
Sbjct: 588 REASAELIKE-MRSCGFAGDASTIGLVTNMLHDGRLDK 623

BLAST of Spo11830.1 vs. TAIR (Arabidopsis)
Match: AT2G28050.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 284.3 bits (726), Expect = 1.300e-76
Identity = 163/424 (38.44%), Postives = 252/424 (59.43%), Query Frame = 1

		  

Query: 1   MTTQDFLKTLKTAKRAFPSAISQSLNHELTPIKTLINSSF--NTISSPSKTPSSHSTISS 60
           MT Q FLKTLKTAK+ +  +I           K L+NSS    T++SP +TP        
Sbjct: 1   MTPQCFLKTLKTAKQTYTFSI----------YKLLLNSSSINQTLASP-ETP-------- 60

Query: 61  FLSSLSSHQLHSFLSDPSVKTYDCLRIFNIVLHYQSDLSFKPDIHAHFTLICRLIKSRLY 120
            LS L+   L   LSDP +K++ C+ +FN +L   S  SF+PD+  H +L  R++  R +
Sbjct: 61  -LSDLNLSTLRRILSDPDIKSWKCISLFNFILENPSLFSFQPDLRTHLSLTFRVLSERRF 120

Query: 121 SDAEVLLQKFILGANYRYPFCDFTNWVENYCK-ESRIITKLLNMLLKLYSDHQMFDMAVT 180
           S A+ LL+   +    RYPF    + V + C  E +++ +  N ++ +YSD+  F   V 
Sbjct: 121 SYAKELLKPVAIDDILRYPFNVIVSSVIDECGCEKKVVGRFFNSMIMVYSDNGKFSEVVE 180

Query: 181 AFEYMVDREIERDEKTCSVHLHALVKANKVDLGFEFLRRMVDSGMEV-SVFSLTIVVSGL 240
            FEYM + E++ DEKTC++HL  L + ++++L  +F   MV+SG++V +V+SLT+VV+ L
Sbjct: 181 VFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMVESGIDVVTVYSLTVVVTVL 240

Query: 241 CGIGELKMGRELVEEM-VGMGVRPNVITFNTLVDACSRRWDFTELDLVLCLMGREGVPFN 300
           C  GE+   RELVEEM +  GV+ N++TF +++  C +RWDF ELDLVL LM +E V  +
Sbjct: 241 CCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLD 300

Query: 301 DMTYKLLIEGYSGSGKVDEAKRLLLEMQDKDFDVETYLYYSIIRGYCRLGNTSSGFSLLK 360
             +YK+LI+G++  GKV+EA+RL+L M DK   VE+YLY  I+ GY R G       L  
Sbjct: 301 LDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYS 360

Query: 361 TMQEKDISPCDGTYWCLISGMCKVGDMGQVKELVNEFLKKGGEVNDCMLNELVNGYQKTG 420
            M  + ++P   TYW L++G+CK G + +    +NE      E+++ M + L     + G
Sbjct: 361 EMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVG 404

BLAST of Spo11830.1 vs. TAIR (Arabidopsis)
Match: AT2G32630.1 (Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 243.0 bits (619), Expect = 3.400e-64
Identity = 128/371 (34.50%), Postives = 219/371 (59.03%), Query Frame = 1

		  

Query: 58  SFLSSLSSHQLHSFLSDPSVKTYDCLRIFNIVLHYQSDLSFKPDIHAHFTLICRLIKSRL 117
           S L +L+S+     LS+P++ T  C+  F ++  ++S+L  KPD+ A  TL  RL  +R 
Sbjct: 55  SLLFNLNSNVTRLVLSEPTLPTQSCIDFFKLLREFESNL--KPDLTAVVTLSHRLYSNRR 114

Query: 118 YSDAEVLLQKFILGANYRYPF---------CDFTNWVENYCKESRIITKLLNMLLKLYSD 177
           +++   LL   +    Y+ P          CD +       ++     K  +++ ++Y D
Sbjct: 115 FNEMRSLLNSVVNDGFYKRPVEELGSAMVDCDISE------EKFEFFEKFFDLVFRVYVD 174

Query: 178 HQMFDMAVTAFEYMVDREIERDEKTCSVHLHALVKANKVDLGFEFLRRMVDSGMEVSVFS 237
           + MF+  +  F+YMV + +  DE++C V L A  K  ++DL  E  RRMVDSG++++V+S
Sbjct: 175 NGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYS 234

Query: 238 LTIVVSGLCGIGELKMGRELVEEMVGMGVRPNVITFNTLVDACSRRWDFTELDLVLCLMG 297
           LTIVV GLC  GE++  ++L++E    G++P   T+NT+++A  ++ DF+ ++ VL +M 
Sbjct: 235 LTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMK 294

Query: 298 REGVPFNDMTYKLLIEGYSGSGKVDEAKRLLLEMQDKDFDVETYLYYSIIRGYCRLGNTS 357
           ++GV +N +TY LL+E    +GK+ +A++L  EM+++  + + ++Y S+I   CR GN  
Sbjct: 295 KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMK 354

Query: 358 SGFSLLKTMQEKDISPCDGTYWCLISGMCKVGDMGQVKELVNEFLKKGGEVNDCMLNELV 417
             F L   + EK +SP   TY  LI G+CKVG+MG  + L+NE   KG  +   + N L+
Sbjct: 355 RAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLI 414

Query: 418 NGYQKTGIMDE 420
           +GY + G++DE
Sbjct: 415 DGYCRKGMVDE 417

BLAST of Spo11830.1 vs. TAIR (Arabidopsis)
Match: AT5G38730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 123.2 bits (308), Expect = 4.000e-28
Identity = 88/334 (26.35%), Postives = 156/334 (46.71%), Query Frame = 1

		  

Query: 97  SFKPDIHAHFTLICRLIKSRLYSDAEVLLQKFILGANYRYPFCDFTNWVENYCKESRIIT 156
           S K  + + + +I  L K + +  A  LL K         P     + V    ++   ++
Sbjct: 75  SSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLV-LRSLVGGVSEDPEDVS 134

Query: 157 KLLNMLLKLYSDHQMFDMAVTAFEYMVDREIERDEKTCSVHLHALVKANKVDLGFEFLRR 216
            + + L+  Y+   M + ++  FE +    ++   + C+V L++LVK    D  ++  ++
Sbjct: 135 HVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKK 194

Query: 217 MVDSGMEVSVFSLTIVVSGLCGIGELKMGRELVEEMVGMGVRPNVITFNTLVDA-CSRRW 276
           MV  G+  ++    ++V      G+ +   +L+ EM   GV P++ T+NTL+   C +  
Sbjct: 195 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 254

Query: 277 DFTELDLVLCLMGREGVPFNDMTYKLLIEGYSGSGKVDEAKRLLLEMQDKDFDVETYLYY 336
            F  L  V   M R GV  N +TY   I G+S  G++ EA RL  E++D D       Y 
Sbjct: 255 HFEALS-VQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYT 314

Query: 337 SIIRGYCRLGNTSSGFSLLKTMQEKDISPCDGTYWCLISGMCKVGDMGQVKELVNEFLKK 396
           ++I GYCR+ +      L + M+ +  SP   TY  ++  +C+ G + +   L+ E   K
Sbjct: 315 TLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGK 374

Query: 397 GGEVNDCMLNELVNGYQKTGIMDELDELKCLVKM 430
             E ++   N L+N Y K  I D +  +K   KM
Sbjct: 375 KIEPDNITCNTLINAYCK--IEDMVSAVKVKKKM 403

BLAST of Spo11830.1 vs. TAIR (Arabidopsis)
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 123.2 bits (308), Expect = 4.000e-28
Identity = 102/405 (25.19%), Postives = 187/405 (46.17%), Query Frame = 1

		  

Query: 33  KTLINSSFNTISSPSKTPSSHSTISSFLSSLSSH--QLHSFLSDPSVKTYDCLRIFNIVL 92
           KTLI  S +T +S   +PS        L+ L  H  QLH   ++ + +        N++L
Sbjct: 5   KTLIRRSLSTFAS---SPSDSLLADKALTFLKRHPYQLHHLSANFTPEAAS-----NLLL 64

Query: 93  HYQSD----LSFK--PDIHAHFTLICRLI------KSRLYSDAEVLLQKFILGA-NYRYP 152
             Q+D    L F    + H  FTL C+ I      K +LY  A++L +       +  Y 
Sbjct: 65  KSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYA 124

Query: 153 FCDFTNWVENY--CKESRIITKLLNMLLKLYSDHQMFDMAVTAFEYMVDREIERDEKTCS 212
              F +  E Y  C  +   + + ++++K YS   + D A++               + +
Sbjct: 125 SLVFKSLQETYDLCYST---SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYN 184

Query: 213 VHLHALVKANK-VDLGFEFLRRMVDSGMEVSVFSLTIVVSGLCGIGELKMGRELVEEMVG 272
             L A +++ + +       + M++S +  +VF+  I++ G C  G + +   L ++M  
Sbjct: 185 AVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMET 244

Query: 273 MGVRPNVITFNTLVDACSRRWDFTELDLVLCLMGREGVPFNDMTYKLLIEGYSGSGKVDE 332
            G  PNV+T+NTL+D   +     +   +L  M  +G+  N ++Y ++I G    G++ E
Sbjct: 245 KGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE 304

Query: 333 AKRLLLEMQDKDFDVETYLYYSIIRGYCRLGNTSSGFSLLKTMQEKDISPCDGTYWCLIS 392
              +L EM  + + ++   Y ++I+GYC+ GN      +   M    ++P   TY  LI 
Sbjct: 305 VSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIH 364

Query: 393 GMCKVGDMGQVKELVNEFLKKGGEVNDCMLNELVNGYQKTGIMDE 420
            MCK G+M +  E +++   +G   N+     LV+G+ + G M+E
Sbjct: 365 SMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398

BLAST of Spo11830.1 vs. TAIR (Arabidopsis)
Match: AT1G62670.1 (rna processing factor 2)

HSP 1 Score: 122.1 bits (305), Expect = 8.800e-28
Identity = 89/338 (26.33%), Postives = 148/338 (43.79%), Query Frame = 1

		  

Query: 99  KPDIHAHFTLICRLIKSRLYSDAEVLLQKFILGANYRYPFCDFTNWVENYCKESRIIT-- 158
           +P++  + +LI  L     +SDA  LL   I           F+  ++ + KE +++   
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMI-ERKINPDVFTFSALIDAFVKEGKLVEAE 347

Query: 159 KLLNMLLKLYSD---------------HQMFDMAVTAFEYMVDREIERDEKTCSVHLHAL 218
           KL + ++K   D               H   D A   FE+MV +    D  T +  +   
Sbjct: 348 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 407

Query: 219 VKANKVDLGFEFLRRMVDSGMEVSVFSLTIVVSGLCGIGELKMGRELVEEMVGMGVRPNV 278
            K  +V+ G E  R M   G+  +  +  I++ GL   G+  M +E+ +EMV  GV PN+
Sbjct: 408 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 467

Query: 279 ITFNTLVDACSRRWDFTELDLVLCLMGREGVPFNDMTYKLLIEGYSGSGKVDEAKRLLLE 338
           +T+NTL+D   +     +  +V   + R  +     TY ++IEG   +GKV++   L   
Sbjct: 468 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 527

Query: 339 MQDKDFDVETYLYYSIIRGYCRLGNTSSGFSLLKTMQEKDISPCDGTYWCLISGMCKVGD 398
           +  K    +   Y ++I G+CR G+     +L K M+E    P  G Y  LI    + GD
Sbjct: 528 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 587

Query: 399 MGQVKELVNEFLKKGGEVNDCMLNELVNGYQKTGIMDE 420
                EL+ E ++  G   D     LV      G +D+
Sbjct: 588 REASAELIKE-MRSCGFAGDASTIGLVTNMLHDGRLDK 623

The following BLAST results are available for this feature:
BLAST of Spo11830.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|731355371|ref|XP_010689107.1|4.5e-18374.6PREDICTED: pentatricopeptide r... [more]
gi|902132726|gb|KNA04329.1|2.4e-160100.hypothetical protein SOVF_2006... [more]
gi|590590760|ref|XP_007016826.1|1.5e-9845.5Pentatricopeptide repeat-conta... [more]
gi|1009115988|ref|XP_015874534.1|7.6e-9847.2PREDICTED: pentatricopeptide r... [more]
gi|645217510|ref|XP_008226176.1|1.5e-9344.2PREDICTED: pentatricopeptide r... [more]
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BLAST of Spo11830.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0J8BLN6_BETVU3.1e-18374.6Uncharacterized protein OS=Bet... [more]
A0A0K9QAN9_SPIOL1.7e-160100.Uncharacterized protein OS=Spi... [more]
A0A061GX52_THECC1.1e-9845.5Pentatricopeptide repeat-conta... [more]
M5W147_PRUPE3.0e-9346.6Uncharacterized protein (Fragm... [more]
A0A0D2QDH4_GOSRA1.4e-9043.2Uncharacterized protein OS=Gos... [more]
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BLAST of Spo11830.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PP174_ARATH2.4e-7538.4Pentatricopeptide repeat-conta... [more]
PP180_ARATH6.1e-6334.5Pentatricopeptide repeat-conta... [more]
PP404_ARATH7.0e-2726.3Pentatricopeptide repeat-conta... [more]
PP407_ARATH7.0e-2725.1Pentatricopeptide repeat-conta... [more]
PPR91_ARATH1.6e-2626.3Pentatricopeptide repeat-conta... [more]
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BLAST of Spo11830.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT2G28050.11.3e-7638.4Pentatricopeptide repeat (PPR)... [more]
AT2G32630.13.4e-6434.5Pentatricopeptide repeat (PPR-... [more]
AT5G38730.14.0e-2826.3Tetratricopeptide repeat (TPR)... [more]
AT5G39710.14.0e-2825.1Tetratricopeptide repeat (TPR)... [more]
AT1G62670.18.8e-2826.3rna processing factor 2[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 298..326
score: 3.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 332..378
score: 3.
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 214..272
score: 5.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 298..327
score: 8.7E-5coord: 333..364
score: 2.7E-6coord: 228..261
score: 4.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 330..364
score: 10.6coord: 155..189
score: 6.675coord: 260..294
score: 8.298coord: 365..399
score: 7.826coord: 295..329
score: 10.567coord: 225..259
score: 9.953coord: 190..224
score: 9
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 17..423
score: 6.0

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090617 mitochondrial mRNA 5'-end processing
biological_process GO:0015994 chlorophyll metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0034051 negative regulation of plant-type hypersensitive response
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0009658 chloroplast organization
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0008152 metabolic process
biological_process GO:0010024 phytochromobilin biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006788 heme oxidation
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0010239 chloroplast mRNA processing
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0032984 protein-containing complex disassembly
biological_process GO:0035265 organ growth
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0009611 response to wounding
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0006399 tRNA metabolic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009805 coumarin biosynthetic process
biological_process GO:0009156 ribonucleoside monophosphate biosynthetic process
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0015031 protein transport
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0006457 protein folding
biological_process GO:0034660 ncRNA metabolic process
biological_process GO:0000023 maltose metabolic process
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0006486 protein glycosylation
biological_process GO:0044249 cellular biosynthetic process
biological_process GO:0016310 phosphorylation
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009165 nucleotide biosynthetic process
biological_process GO:0006783 heme biosynthetic process
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0006886 intracellular protein transport
biological_process GO:0008610 lipid biosynthetic process
biological_process GO:0044255 cellular lipid metabolic process
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0006531 aspartate metabolic process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0006412 translation
biological_process GO:0044208 'de novo' AMP biosynthetic process
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006364 rRNA processing
biological_process GO:0044237 cellular metabolic process
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0010207 photosystem II assembly
biological_process GO:0030154 cell differentiation
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0015979 photosynthesis
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006522 alanine metabolic process
biological_process GO:0042793 plastid transcription
biological_process GO:0006189 'de novo' IMP biosynthetic process
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0006508 proteolysis
biological_process GO:0042742 defense response to bacterium
biological_process GO:0009902 chloroplast relocation
biological_process GO:0016556 mRNA modification
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0006144 purine nucleobase metabolic process
cellular_component GO:0032040 small-subunit processome
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009501 amyloplast
cellular_component GO:0005829 cytosol
cellular_component GO:0009513 etioplast
cellular_component GO:0009537 proplastid
cellular_component GO:0005886 plasma membrane
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0009509 chromoplast
cellular_component GO:0009295 nucleoid
cellular_component GO:0019898 extrinsic component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0009654 photosystem II oxygen evolving complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009523 photosystem II
cellular_component GO:0009543 chloroplast thylakoid lumen
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0005634 nucleus
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005773 vacuole
cellular_component GO:0009579 thylakoid
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009536 plastid
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0004749 ribose phosphate diphosphokinase activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0004046 aminoacylase activity
molecular_function GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004392 heme oxygenase (decyclizing) activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0047134 protein-disulfide reductase activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0070626 (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity
molecular_function GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0020037 heme binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo253950.82Barchart | Table
Spo112210.79Barchart | Table
Spo157930.79Barchart | Table
Spo149990.78Barchart | Table
Spo049950.75Barchart | Table
Spo171730.75Barchart | Table
Spo266730.75Barchart | Table
Spo144830.74Barchart | Table
Spo182610.74Barchart | Table
Spo250270.73Barchart | Table
Spo068850.73Barchart | Table
Spo029640.73Barchart | Table
Spo272530.72Barchart | Table
Spo112690.72Barchart | Table
Spo023960.72Barchart | Table
Spo240160.72Barchart | Table
Spo002140.72Barchart | Table
Spo210740.72Barchart | Table
Spo067750.71Barchart | Table
Spo033430.71Barchart | Table
Spo132400.71Barchart | Table
Spo063980.70Barchart | Table
Spo043770.70Barchart | Table
Spo093860.70Barchart | Table
Spo172610.70Barchart | Table
Spo181040.70Barchart | Table
Spo239330.70Barchart | Table
Spo257730.70Barchart | Table
Spo014960.69Barchart | Table
Spo100090.69Barchart | Table
Spo184780.69Barchart | Table
Spo072290.69Barchart | Table
Spo199580.69Barchart | Table
Spo240540.68Barchart | Table
Spo181840.68Barchart | Table
Spo050780.68Barchart | Table
Spo101060.68Barchart | Table
Spo047090.67Barchart | Table
Spo128220.67Barchart | Table
Spo235040.67Barchart | Table
Spo019830.67Barchart | Table
Spo037850.67Barchart | Table
Spo142320.67Barchart | Table
Spo101970.67Barchart | Table
Spo229990.67Barchart | Table
Spo266710.67Barchart | Table
Spo101330.67Barchart | Table
Spo097770.66Barchart | Table
Spo077370.66Barchart | Table
Spo072300.66Barchart | Table
Spo150250.66Barchart | Table
Spo000270.66Barchart | Table
Spo034760.66Barchart | Table
Spo026480.65Barchart | Table
Spo217570.65Barchart | Table
Spo186950.65Barchart | Table
Spo066460.65Barchart | Table
Spo153900.65Barchart | Table