Spo11592 (gene)

Overview
NameSpo11592
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionHistone H4
Locationchr6 : 39928711 .. 39929022 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGGAAGAGGAAAGGGAGGAAAGGGTTTGGGAAAGGGAGGAGCTAAGAGGCACAGGAAGGTCCTCAGGGATAACATCCAGGGAATTACCAAGCCTGCCATTCGTCGTCTTGCTCGTCGTGGTGGTGTTAAGAGGATCAGTGGTTTGATCTATGAAGAGACTCGCGGTGTTCTCAAGATCTTTCTAGAGAATGTGATTAGAGATGCTGTTACCTACACTGAGCACGCTCGCCGTAAGACGGTTACCGCCATGGATGTTGTCTATGCGCTTAAGAGGCAAGGCCGTACTCTATATGGTTTCGGTGGTTAG

mRNA sequence

ATGTCAGGAAGAGGAAAGGGAGGAAAGGGTTTGGGAAAGGGAGGAGCTAAGAGGCACAGGAAGGTCCTCAGGGATAACATCCAGGGAATTACCAAGCCTGCCATTCGTCGTCTTGCTCGTCGTGGTGGTGTTAAGAGGATCAGTGGTTTGATCTATGAAGAGACTCGCGGTGTTCTCAAGATCTTTCTAGAGAATGTGATTAGAGATGCTGTTACCTACACTGAGCACGCTCGCCGTAAGACGGTTACCGCCATGGATGTTGTCTATGCGCTTAAGAGGCAAGGCCGTACTCTATATGGTTTCGGTGGTTAG

Coding sequence (CDS)

ATGTCAGGAAGAGGAAAGGGAGGAAAGGGTTTGGGAAAGGGAGGAGCTAAGAGGCACAGGAAGGTCCTCAGGGATAACATCCAGGGAATTACCAAGCCTGCCATTCGTCGTCTTGCTCGTCGTGGTGGTGTTAAGAGGATCAGTGGTTTGATCTATGAAGAGACTCGCGGTGTTCTCAAGATCTTTCTAGAGAATGTGATTAGAGATGCTGTTACCTACACTGAGCACGCTCGCCGTAAGACGGTTACCGCCATGGATGTTGTCTATGCGCTTAAGAGGCAAGGCCGTACTCTATATGGTTTCGGTGGTTAG

Protein sequence

MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo11592.1Spo11592.1mRNA


Homology
[Close]
BLAST of Spo11592.1 vs. NCBI nr
Match: gi|976922550|gb|KVI06931.1| (Histone core [Cynara cardunculus var. scolymus])

HSP 1 Score: 199.5 bits (506), Expect = 2.800e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 107 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 166

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 167 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 209
[Close]
BLAST of Spo11592.1 vs. NCBI nr
Match: gi|641854208|gb|KDO73016.1| (hypothetical protein CISIN_1g047769mg, partial [Citrus sinensis])

HSP 1 Score: 199.5 bits (506), Expect = 2.800e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 29  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 88

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 89  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 131
[Close]
BLAST of Spo11592.1 vs. NCBI nr
Match: gi|15226944|ref|NP_180441.1| (histone H4 [Arabidopsis thaliana])

HSP 1 Score: 199.5 bits (506), Expect = 2.800e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of Spo11592.1 vs. NCBI nr
Match: gi|960491942|ref|XP_014751185.1| (PREDICTED: uncharacterized protein LOC100841093 [Brachypodium distachyon])

HSP 1 Score: 199.5 bits (506), Expect = 2.800e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of Spo11592.1 vs. NCBI nr
Match: gi|670426610|ref|XP_008653962.1| (PREDICTED: uncharacterized protein LOC103634138 [Zea mays])

HSP 1 Score: 199.5 bits (506), Expect = 2.800e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of Spo11592.1 vs. UniProtKB/TrEMBL
Match: A2WWR4_ORYSI (Histone H4 OS=Oryza sativa subsp. indica GN=OsI_04340 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.000e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of Spo11592.1 vs. UniProtKB/TrEMBL
Match: A9NJR8_PICSI (Histone H4 OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.000e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of Spo11592.1 vs. UniProtKB/TrEMBL
Match: A9PA83_POPTR (Histone H4 OS=Populus trichocarpa GN=POPTR_0005s11740g PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.000e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of Spo11592.1 vs. UniProtKB/TrEMBL
Match: H9MAC8_PINRA (Histone H4 OS=Pinus radiata GN=0_18315_01 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.000e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of Spo11592.1 vs. UniProtKB/TrEMBL
Match: B9MST3_SOYBN (Histone H4 OS=Glycine max GN=GLYMA_02G224100 PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.000e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of Spo11592.1 vs. ExPASy Swiss-Prot
Match: H4_EUCGL (Histone H4 OS=Eucalyptus globulus PE=3 SV=3)

HSP 1 Score: 199.5 bits (506), Expect = 1.800e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of Spo11592.1 vs. ExPASy Swiss-Prot
Match: H4_CHEMJ (Histone H4 OS=Chelidonium majus PE=3 SV=3)

HSP 1 Score: 199.5 bits (506), Expect = 1.800e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of Spo11592.1 vs. ExPASy Swiss-Prot
Match: H4_ARATH (Histone H4 OS=Arabidopsis thaliana GN=At1g07660 PE=1 SV=2)

HSP 1 Score: 199.5 bits (506), Expect = 1.800e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of Spo11592.1 vs. ExPASy Swiss-Prot
Match: H41_WHEAT (Histone H4 variant TH011 OS=Triticum aestivum PE=3 SV=2)

HSP 1 Score: 199.5 bits (506), Expect = 1.800e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of Spo11592.1 vs. ExPASy Swiss-Prot
Match: H4_PEA (Histone H4 OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 199.5 bits (506), Expect = 1.800e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of Spo11592.1 vs. TAIR (Arabidopsis)
Match: AT1G07660.1 (Histone superfamily protein)

HSP 1 Score: 199.5 bits (506), Expect = 9.900e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of Spo11592.1 vs. TAIR (Arabidopsis)
Match: AT1G07820.1 (Histone superfamily protein)

HSP 1 Score: 199.5 bits (506), Expect = 9.900e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of Spo11592.1 vs. TAIR (Arabidopsis)
Match: AT2G28740.1 (histone H4)

HSP 1 Score: 199.5 bits (506), Expect = 9.900e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of Spo11592.1 vs. TAIR (Arabidopsis)
Match: AT3G45930.1 (Histone superfamily protein)

HSP 1 Score: 199.5 bits (506), Expect = 9.900e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of Spo11592.1 vs. TAIR (Arabidopsis)
Match: AT3G53730.1 (Histone superfamily protein)

HSP 1 Score: 199.5 bits (506), Expect = 9.900e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
The following BLAST results are available for this feature:
BLAST of Spo11592.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|976922550|gb|KVI06931.1|2.8e-48100.Histone core [Cynara carduncul... [more]
gi|641854208|gb|KDO73016.1|2.8e-48100.hypothetical protein CISIN_1g0... [more]
gi|15226944|ref|NP_180441.1|2.8e-48100.histone H4 [Arabidopsis thalia... [more]
gi|960491942|ref|XP_014751185.1|2.8e-48100.PREDICTED: uncharacterized pro... [more]
gi|670426610|ref|XP_008653962.1|2.8e-48100.PREDICTED: uncharacterized pro... [more]
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BLAST of Spo11592.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A2WWR4_ORYSI2.0e-48100.Histone H4 OS=Oryza sativa sub... [more]
A9NJR8_PICSI2.0e-48100.Histone H4 OS=Picea sitchensis... [more]
A9PA83_POPTR2.0e-48100.Histone H4 OS=Populus trichoca... [more]
H9MAC8_PINRA2.0e-48100.Histone H4 OS=Pinus radiata GN... [more]
B9MST3_SOYBN2.0e-48100.Histone H4 OS=Glycine max GN=G... [more]
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BLAST of Spo11592.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
H4_EUCGL1.8e-50100.Histone H4 OS=Eucalyptus globu... [more]
H4_CHEMJ1.8e-50100.Histone H4 OS=Chelidonium maju... [more]
H4_ARATH1.8e-50100.Histone H4 OS=Arabidopsis thal... [more]
H41_WHEAT1.8e-50100.Histone H4 variant TH011 OS=Tr... [more]
H4_PEA1.8e-50100.Histone H4 OS=Pisum sativum PE... [more]
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BLAST of Spo11592.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G07660.19.9e-52100.Histone superfamily protein[more]
AT1G07820.19.9e-52100.Histone superfamily protein[more]
AT2G28740.19.9e-52100.histone H4[more]
AT3G45930.19.9e-52100.Histone superfamily protein[more]
AT3G53730.19.9e-52100.Histone superfamily protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001951Histone H4PRINTSPR00623HISTONEH4coord: 89..100
score: 2.2E-63coord: 5..16
score: 2.2E-63coord: 77..89
score: 2.2E-63coord: 20..39
score: 2.2E-63coord: 40..60
score: 2.2E-63coord: 62..76
score: 2.2
IPR001951Histone H4SMARTSM00417h44coord: 16..90
score: 2.0
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..103
score: 1.8
IPR009072Histone-foldunknownSSF47113Histone-foldcoord: 3..102
score: 4.04
IPR019809Histone H4, conserved sitePROSITEPS00047HISTONE_H4coord: 15..19
scor
NoneNo IPR availablePANTHERPTHR10484HISTONE H4coord: 1..103
score: 1.1E
NoneNo IPR availablePFAMPF15511CENP-T_Ccoord: 35..96
score: 1.

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006334 nucleosome assembly
biological_process GO:0034968 histone lysine methylation
biological_process GO:0009640 photomorphogenesis
biological_process GO:0008283 cell proliferation
biological_process GO:0000186 activation of MAPKK activity
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0048608 reproductive structure development
biological_process GO:0022414 reproductive process
biological_process GO:0009791 post-embryonic development
biological_process GO:0031047 gene silencing by RNA
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0032776 DNA methylation on cytosine
biological_process GO:0006261 DNA-dependent DNA replication
biological_process GO:0006342 chromatin silencing
biological_process GO:0007049 cell cycle
biological_process GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0042176 regulation of protein catabolic process
biological_process GO:0007010 cytoskeleton organization
biological_process GO:0009202 deoxyribonucleoside triphosphate biosynthetic process
biological_process GO:0000338 protein deneddylation
biological_process GO:0009987 cellular process
biological_process GO:0006384 transcription initiation from RNA polymerase III promoter
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0006782 protoporphyrinogen IX biosynthetic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0030154 cell differentiation
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0001731 formation of translation preinitiation complex
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0016570 histone modification
biological_process GO:0006310 DNA recombination
biological_process GO:0009414 response to water deprivation
biological_process GO:0001510 RNA methylation
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0042545 cell wall modification
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0000741 karyogamy
biological_process GO:0009263 deoxyribonucleotide biosynthetic process
biological_process GO:0009186 deoxyribonucleoside diphosphate metabolic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006412 translation
biological_process GO:0051788 response to misfolded protein
biological_process GO:0051301 cell division
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0009853 photorespiration
biological_process GO:0006096 glycolytic process
biological_process GO:0009060 aerobic respiration
biological_process GO:0006270 DNA replication initiation
biological_process GO:0006268 DNA unwinding involved in DNA replication
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006306 DNA methylation
biological_process GO:0006275 regulation of DNA replication
biological_process GO:0009909 regulation of flower development
biological_process GO:0010389 regulation of G2/M transition of mitotic cell cycle
biological_process GO:0016572 histone phosphorylation
biological_process GO:0045490 pectin catabolic process
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0046686 response to cadmium ion
biological_process GO:0008152 metabolic process
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006414 translational elongation
biological_process GO:0010498 proteasomal protein catabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:2001295 malonyl-CoA biosynthetic process
biological_process GO:0009416 response to light stimulus
biological_process GO:0051567 histone H3-K9 methylation
biological_process GO:0006526 arginine biosynthetic process
biological_process GO:0044205 'de novo' UMP biosynthetic process
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0006457 protein folding
cellular_component GO:0033290 eukaryotic 48S preinitiation complex
cellular_component GO:0016020 membrane
cellular_component GO:0005576 extracellular region
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005951 carbamoyl-phosphate synthase complex
cellular_component GO:0000502 proteasome complex
cellular_component GO:0042555 MCM complex
cellular_component GO:0005657 replication fork
cellular_component GO:0046809 replication compartment
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
cellular_component GO:0016282 eukaryotic 43S preinitiation complex
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005971 ribonucleoside-diphosphate reductase complex
cellular_component GO:0005618 cell wall
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009579 thylakoid
cellular_component GO:0000126 transcription factor TFIIIB complex
cellular_component GO:0048046 apoplast
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0005840 ribosome
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0005886 plasma membrane
cellular_component GO:0000786 nucleosome
cellular_component GO:0005730 nucleolus
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005829 cytosol
cellular_component GO:0009507 chloroplast
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0009343 biotin carboxylase complex
cellular_component GO:0016607 nuclear speck
cellular_component GO:0043229 intracellular organelle
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0000785 chromatin
cellular_component GO:0022625 cytosolic large ribosomal subunit
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0008422 beta-glucosidase activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0008097 5S rRNA binding
molecular_function GO:0003678 DNA helicase activity
molecular_function GO:0003688 DNA replication origin binding
molecular_function GO:0032440 2-alkenal reductase [NAD(P)] activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0042393 histone binding
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0045330 aspartyl esterase activity
molecular_function GO:0030599 pectinesterase activity
molecular_function GO:0042286 glutamate-1-semialdehyde 2,1-aminomutase activity
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0036459 thiol-dependent ubiquitinyl hydrolase activity
molecular_function GO:0008483 transaminase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0004075 biotin carboxylase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0005488 binding
molecular_function GO:0030234 enzyme regulator activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0017025 TBP-class protein binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003989 acetyl-CoA carboxylase activity
molecular_function GO:0004709 MAP kinase kinase kinase activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0016829 lyase activity
molecular_function GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
molecular_function GO:0003746 translation elongation factor activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo115930.89Barchart | Table
Spo115940.83Barchart | Table
Spo281520.80Barchart | Table
Spo063310.78Barchart | Table
Spo000710.78Barchart | Table
Spo010860.78Barchart | Table
Spo055890.76Barchart | Table
Spo256350.75Barchart | Table
Spo005250.75Barchart | Table
Spo282890.75Barchart | Table
Spo023800.75Barchart | Table
Spo042080.75Barchart | Table
Spo124580.75Barchart | Table
Spo148750.74Barchart | Table
Spo006890.74Barchart | Table
Spo259540.74Barchart | Table
Spo032410.74Barchart | Table
Spo056600.74Barchart | Table
Spo166270.74Barchart | Table
Spo081600.74Barchart | Table
Spo156660.74Barchart | Table
Spo000820.74Barchart | Table
Spo134120.74Barchart | Table
Spo212880.73Barchart | Table
Spo034730.73Barchart | Table
Spo171180.73Barchart | Table
Spo163660.73Barchart | Table
Spo141650.73Barchart | Table
Spo009000.73Barchart | Table
Spo028380.73Barchart | Table
Spo223940.72Barchart | Table
Spo074020.72Barchart | Table
Spo272230.72Barchart | Table
Spo237070.72Barchart | Table
Spo058490.72Barchart | Table
Spo032000.72Barchart | Table
Spo046670.72Barchart | Table
Spo119430.72Barchart | Table
Spo212060.72Barchart | Table
Spo252890.72Barchart | Table
Spo157510.71Barchart | Table
Spo223100.71Barchart | Table
Spo095840.71Barchart | Table
Spo156040.71Barchart | Table
Spo132790.70Barchart | Table
Spo088160.70Barchart | Table
Spo089610.70Barchart | Table
Spo120480.70Barchart | Table
Spo217620.70Barchart | Table
Spo251810.70Barchart | Table
Spo272450.70Barchart | Table
Spo179760.69Barchart | Table
Spo170170.69Barchart | Table
Spo059800.69Barchart | Table
Spo159390.69Barchart | Table
Spo084410.69Barchart | Table
Spo123040.69Barchart | Table
Spo120620.69Barchart | Table
Spo256690.69Barchart | Table
Spo247030.69Barchart | Table
Spo122550.69Barchart | Table
Spo121910.69Barchart | Table
Spo186470.69Barchart | Table
Spo180490.69Barchart | Table
Spo236810.68Barchart | Table
Spo123110.68Barchart | Table
Spo115160.68Barchart | Table
Spo129940.68Barchart | Table
Spo137230.68Barchart | Table
Spo079200.68Barchart | Table
Spo165140.68Barchart | Table
Spo057830.68Barchart | Table
Spo180940.68Barchart | Table
Spo188310.68Barchart | Table
Spo054550.68Barchart | Table
Spo043110.68Barchart | Table
Spo230380.68Barchart | Table
Spo232410.68Barchart | Table
Spo234970.68Barchart | Table
Spo007240.68Barchart | Table
Spo022750.68Barchart | Table
Spo267190.68Barchart | Table
Spo263180.67Barchart | Table
Spo160970.67Barchart | Table
Spo125930.67Barchart | Table
Spo084510.67Barchart | Table
Spo117360.67Barchart | Table
Spo209970.67Barchart | Table
Spo029120.67Barchart | Table
Spo095630.67Barchart | Table
Spo168710.67Barchart | Table
Spo105990.67Barchart | Table
Spo222700.67Barchart | Table
Spo138560.67Barchart | Table
Spo184490.66Barchart | Table
Spo138460.66Barchart | Table
Spo258620.66Barchart | Table
Spo220690.66Barchart | Table
Spo048120.66Barchart | Table
Spo042820.66Barchart | Table
Spo103270.66Barchart | Table
Spo022180.66Barchart | Table
Spo042190.66Barchart | Table
Spo060860.66Barchart | Table
Spo256160.66Barchart | Table
Spo151320.66Barchart | Table
Spo102910.66Barchart | Table
Spo054610.65Barchart | Table
Spo136090.65Barchart | Table
Spo192070.65Barchart | Table
Spo198870.65Barchart | Table
Spo004680.65Barchart | Table
Spo272090.65Barchart | Table
Spo131300.65Barchart | Table
Spo155830.65Barchart | Table
Spo225200.65Barchart | Table