Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTACTACTTCTACAAATCTTATAGCTTCTTTTTTTCCCTTCTAATTAGTTCTTTAATTAATTAGCTCATAAATTTAACCTTAGCTTAATTAGAACACTAACCACTCTAGTTTAATTTCCATTACCACTATATATCCCCTTTCTTCTTTTGTTCAAATCTAGCTAAGTTAGCTAAGCTAAGCTTATAAGCTCATCAATCATCAAACATGGTTTCTCCAGCCGTTGCTCGATTCGCCGTCGGTATTCTAGGTATTACTAATTTGTGATACTAATCAAATGATGAAGATGTTTAAATGTTTTTGAGGAACATGCAGTTCGTGGGGATTAATAACTTTGATTATTATTATTACCATGATAATTAATTAAGCATGTTCCTGAAAATTATTTCACTATGATATGATACATCAATTTTGACGTAAGGTCATTTTACTTTGATTCCAGGGAATATCATCTCTTTCTCCCTCTACTTATCTCCCATGTAAGTTTAACTTCTTAACCATCACTCCTTTTTTTTAACATACACGTACTCATTTTACTCAAACATGCTTCATGCATGCTAAGAGGCTTTTTCGGTCAATTCCCCCATGTGTGGGACCCGGAGAATTTATTCATTGCAGTTCGTTCTATCACTACGAGAATTTGTATATTTAATGACAACCTAATAGCGACGGATCAAAATTTTTGTCGTAAAAACCACCGTCGTAAATGTGTTTTACGACGGGTTAACGACGGGATTTTCCATTAATGACGGACCCCTTTTATGACGGATCCGCGACATGAAATCCCGTCGTTAATCAACGATTATTGCCTTTAACGACAGAGTTTCTCGTCGTTAATGGTACAATTTCTTGTAGTGTATTCACCTGATTTCCACTCCTTTTTACTGAACTGAACTTATTTTTCCTGTGGAAATATGGTGAACGGAACATTAATCTTCCCATAATCTATTAAGTACTTAATTAATTAACTAATGATACTTCTTTTTTCTTATTTGATGGTTAATTTTCAGGCCAACATTTATAAGGATATGCAAGAAGGGATCAGTAGAGCAATACTCAGCAACTCCATACTTGCTCACATTCTTAAACTGCATGTTATGGACTATTTACGGAATGCCATTTATCCAACCTAACAACATTTTGCTATCCACCATTTCCGCAAGTGGTTGTGTTATTGAGTCAGTTTATTTGATGCTCTTCATCATTAACACTCAGAACAAGAAGAAGAAGATCACTTTGATCCTTCTTGTCCTCGCCGAGGTGCTCGCCGTCGGTATCGCGTTGGCGTTGGTGCTCACCTTCACTCACACCACCAAACGCCGTACTCAAATTTTTGGGCTACTTGGTGATGTTAGTGGCGTTCTTATGTATGCCTCTCCGTTAGCCGTCATGGTTAGTACTCCGCCCTTTAAAATTATAATGGTTACTGTATCAGTGTGTCGGTTTAAGTGATGCATTTAAAAAAAAAAATTAAAAAAAATTGAGGGAGTTTGTAAAAATTTGAGCATTTTGATTGTATTTATATAGGGTAAGTGTCCGTACATCAGTAACATGGGTGATGTGGTGCAACTATGTACGAATAGTACACCAACTAATATAAAATTAAAAATTTACTAGACGGTTCTTTTCCATGATGAATTGACATTACTTCAAAAAATCATGATAATTTGTAAGAATATATATATAACAGATAGAATTTAATTAGTGTTGCTAGTTGATTAGTCATTTTCTTTAAGAAGAATCTAGTCTTGTAATTAAGGTTACAACAATAATTTGTCGATTGTACTAATGATATGTTTTGGGTTATAAATGTGCAGAAACAGGTGGTCAAAACTAAAAGTGTGGAATATATGCCGTTGGCTGTCTCAGTGACTTGTTTTGGAAGTGCAGTTATCTGGACTTTATATGCCATCCGCCCATTCGATCCCTATGTTGTTGTATGTACATTCTCTCTCTCTCTCTTTCTCTGACATGACCATGCATGGTGATGTATGAGCAACCTTTCCTTTCCCATATGTTAACCATGATTCCATGAATGTTGAATGGAATGATCCACCTATTCTTTTCCAACAACAATGAAGCATTTCCAATTTAGATTCTAAATGTTTTGTAGACTTGAATAAAAGAAATATACCTTGACTACATGGTTTGTACCATCTAGACCTTGGTAGTATAAAGTGACAAATTTTTACGCAGTTAAACATATAAAAGGTCGTTATTTAAACTAGATGCGTAGACATTGAATTTTTATTTATGGTAACTTTATCTTATTAGAAATAAGATTCTTCATCCTTTTAAAAGGTTAAACCGCAATATTAACATACTATCGATTTGCCTTGTTTACTTACCTTTTTACCCTACATCGGCAACTTCAAGTTTGAGAAGGGATGGCTTATAAGGGATGTGTTTGGCCATTAAATTTCCACGTACTTTTTAAATACATCCTCTATTCTTTTTTAAATGACACAATTATTTAGGCGCGTTTGCCAATGCACGATTTCAAACATTAATATCTTCCATTATGGATAAGAAAAAATTATAAAAAGTTGATATTTAAAAACTATTCATTGAGACGAATCTAACAAGACTCACACGACTATGTTTTTCTTATGTATAAATCACAAAATAAAGTCAAAGGAGCTTGTGTGAATGGTGTCAAAAACCCAATTGTGTCATGTAAACAAGAACGGAGGAAGTATGTAAATTAATATTTCCATAAATAGTAATAACACTAAACTTTTGGATTAAAGGAATAAATAATTTAGTTTGAGAAATGACACTTTTGGAATTAGTTTATATAATAAATAAAACAAAATGTTGAGATCTCATTGGTGCTACCTAGCTAGCAAGTAGCAAGTACGGAGTGTGCAAATGTCATTTTCAAACCCAAAAACTCAAAAGTAGTAGTGGTGTATTATTAATTTTTTTTATCAATTTATTTAATTTTCAAAGTTATTTAGAATTCCCACAAGTATGGGATGAGTCTCTATTATTGTACCTAACCTTAAATTTACTATGGCCCACTTCATTGTATGGGATTCTGCCCAAACGCTGACGTGGACCAAAATGACAAGAAATATTAATAAAAAATTAGAACAAACTTTGTTTCAAAAGAAAAGGTGGTACTCCGTAATAAAAAGACAAAAGTCAAGCAAAATTGTTGCTCTTATGTAATGTTCCACAATTGCATTAATTTGGAGATTATCTTCTTCTTAAAAATTGGGCTTATGATATTATTGTTGTTTGATTTTGTTATTCAGGCTCCAAATGGAATCGGGTGTTTTCTTGGGCTGGCCCAATTGATGCTTTACGCAGCTTATTACAAGTCCAGTAAGCAACAAATTGCTGATAAACAAAATGCGGAAATTGAGAAAATTGAAATGGGCCTTAAAGAAGTTATTGTGGTTACCAAGGAGCCCAGCAAGGTTAATGACTATCCTACCCTTAAGACGATGGAAAATGATTTTGCCCCTAATCTTTAATTTGTACTACGTAATTGTATTAGTAAAGCTCTTGGCTTCTCTAAATGTTTTACTTATTGTTATTGTATGTATTCAAAACTTTAGTAATCATTTGTTTGGCGGGAGTATTTTTCTTGGAAATAAATTTTTCTTTGTCGCATTTCCT CTTACTACTTCTACAAATCTTATAGCTTCTTTTTTTCCCTTCTAATTAGTTCTTTAATTAATTAGCTCATAAATTTAACCTTAGCTTAATTAGAACACTAACCACTCTAGTTTAATTTCCATTACCACTATATATCCCCTTTCTTCTTTTGTTCAAATCTAGCTAAGTTAGCTAAGCTAAGCTTATAAGCTCATCAATCATCAAACATGGTTTCTCCAGCCGTTGCTCGATTCGCCGTCGGTATTCTAGGGAATATCATCTCTTTCTCCCTCTACTTATCTCCCATGCCAACATTTATAAGGATATGCAAGAAGGGATCAGTAGAGCAATACTCAGCAACTCCATACTTGCTCACATTCTTAAACTGCATGTTATGGACTATTTACGGAATGCCATTTATCCAACCTAACAACATTTTGCTATCCACCATTTCCGCAAGTGGTTGTGTTATTGAGTCAGTTTATTTGATGCTCTTCATCATTAACACTCAGAACAAGAAGAAGAAGATCACTTTGATCCTTCTTGTCCTCGCCGAGGTGCTCGCCGTCGGTATCGCGTTGGCGTTGGTGCTCACCTTCACTCACACCACCAAACGCCGTACTCAAATTTTTGGGCTACTTGGTGATGTTAGTGGCGTTCTTATGTATGCCTCTCCGTTAGCCGTCATGAAACAGGTGGTCAAAACTAAAAGTGTGGAATATATGCCGTTGGCTGTCTCAGTGACTTGTTTTGGAAGTGCAGTTATCTGGACTTTATATGCCATCCGCCCATTCGATCCCTATGTTGTTGCTCCAAATGGAATCGGGTGTTTTCTTGGGCTGGCCCAATTGATGCTTTACGCAGCTTATTACAAGTCCAGTAAGCAACAAATTGCTGATAAACAAAATGCGGAAATTGAGAAAATTGAAATGGGCCTTAAAGAAGTTATTGTGGTTACCAAGGAGCCCAGCAAGGTTAATGACTATCCTACCCTTAAGACGATGGAAAATGATTTTGCCCCTAATCTTTAATTTGTACTACGTAATTGTATTAGTAAAGCTCTTGGCTTCTCTAAATGTTTTACTTATTGTTATTGTATGTATTCAAAACTTTAGTAATCATTTGTTTGGCGGGAGTATTTTTCTTGGAAATAAATTTTTCTTTGTCGCATTTCCT ATGGTTTCTCCAGCCGTTGCTCGATTCGCCGTCGGTATTCTAGGGAATATCATCTCTTTCTCCCTCTACTTATCTCCCATGCCAACATTTATAAGGATATGCAAGAAGGGATCAGTAGAGCAATACTCAGCAACTCCATACTTGCTCACATTCTTAAACTGCATGTTATGGACTATTTACGGAATGCCATTTATCCAACCTAACAACATTTTGCTATCCACCATTTCCGCAAGTGGTTGTGTTATTGAGTCAGTTTATTTGATGCTCTTCATCATTAACACTCAGAACAAGAAGAAGAAGATCACTTTGATCCTTCTTGTCCTCGCCGAGGTGCTCGCCGTCGGTATCGCGTTGGCGTTGGTGCTCACCTTCACTCACACCACCAAACGCCGTACTCAAATTTTTGGGCTACTTGGTGATGTTAGTGGCGTTCTTATGTATGCCTCTCCGTTAGCCGTCATGAAACAGGTGGTCAAAACTAAAAGTGTGGAATATATGCCGTTGGCTGTCTCAGTGACTTGTTTTGGAAGTGCAGTTATCTGGACTTTATATGCCATCCGCCCATTCGATCCCTATGTTGTTGCTCCAAATGGAATCGGGTGTTTTCTTGGGCTGGCCCAATTGATGCTTTACGCAGCTTATTACAAGTCCAGTAAGCAACAAATTGCTGATAAACAAAATGCGGAAATTGAGAAAATTGAAATGGGCCTTAAAGAAGTTATTGTGGTTACCAAGGAGCCCAGCAAGGTTAATGACTATCCTACCCTTAAGACGATGGAAAATGATTTTGCCCCTAATCTTTAA MVSPAVARFAVGILGNIISFSLYLSPMPTFIRICKKGSVEQYSATPYLLTFLNCMLWTIYGMPFIQPNNILLSTISASGCVIESVYLMLFIINTQNKKKKITLILLVLAEVLAVGIALALVLTFTHTTKRRTQIFGLLGDVSGVLMYASPLAVMKQVVKTKSVEYMPLAVSVTCFGSAVIWTLYAIRPFDPYVVAPNGIGCFLGLAQLMLYAAYYKSSKQQIADKQNAEIEKIEMGLKEVIVVTKEPSKVNDYPTLKTMENDFAPNL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo11590.1 vs. NCBI nr
Match: gi|902186568|gb|KNA10709.1| (hypothetical protein SOVF_141820 [Spinacia oleracea]) HSP 1 Score: 511.9 bits (1317), Expect = 6.600e-142 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1
BLAST of Spo11590.1 vs. NCBI nr
Match: gi|731367424|ref|XP_010695604.1| (PREDICTED: bidirectional sugar transporter SWEET7-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 429.1 bits (1102), Expect = 5.700e-117 Identity = 225/273 (82.42%), Postives = 244/273 (89.38%), Query Frame = 1
BLAST of Spo11590.1 vs. NCBI nr
Match: gi|731367422|ref|XP_010695602.1| (PREDICTED: bidirectional sugar transporter SWEET4-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 257.3 bits (656), Expect = 3.000e-65 Identity = 126/241 (52.28%), Postives = 178/241 (73.86%), Query Frame = 1
BLAST of Spo11590.1 vs. NCBI nr
Match: gi|590679477|ref|XP_007040592.1| (Nodulin MtN3 family protein isoform 1 [Theobroma cacao]) HSP 1 Score: 250.4 bits (638), Expect = 3.600e-63 Identity = 122/237 (51.48%), Postives = 171/237 (72.15%), Query Frame = 1
BLAST of Spo11590.1 vs. NCBI nr
Match: gi|728849565|gb|KHG29008.1| (Bidirectional sugar transporter SWEET7 -like protein [Gossypium arboreum]) HSP 1 Score: 249.6 bits (636), Expect = 6.200e-63 Identity = 131/258 (50.78%), Postives = 179/258 (69.38%), Query Frame = 1
BLAST of Spo11590.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QTW4_SPIOL (Bidirectional sugar transporter SWEET OS=Spinacia oleracea GN=SOVF_141820 PE=3 SV=1) HSP 1 Score: 511.9 bits (1317), Expect = 4.600e-142 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1
BLAST of Spo11590.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BC97_BETVU (Bidirectional sugar transporter SWEET OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g125960 PE=3 SV=1) HSP 1 Score: 429.1 bits (1102), Expect = 3.900e-117 Identity = 225/273 (82.42%), Postives = 244/273 (89.38%), Query Frame = 1
BLAST of Spo11590.1 vs. UniProtKB/TrEMBL
Match: A0A061G6Q7_THECC (Bidirectional sugar transporter SWEET OS=Theobroma cacao GN=TCM_016513 PE=3 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 2.500e-63 Identity = 122/237 (51.48%), Postives = 171/237 (72.15%), Query Frame = 1
BLAST of Spo11590.1 vs. UniProtKB/TrEMBL
Match: A0A0B0PRA3_GOSAR (Bidirectional sugar transporter SWEET OS=Gossypium arboreum GN=F383_10164 PE=3 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 4.300e-63 Identity = 131/258 (50.78%), Postives = 179/258 (69.38%), Query Frame = 1
BLAST of Spo11590.1 vs. UniProtKB/TrEMBL
Match: A0A0B0PWH9_GOSAR (Bidirectional sugar transporter SWEET OS=Gossypium arboreum GN=F383_05525 PE=3 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 1.200e-62 Identity = 122/235 (51.91%), Postives = 169/235 (71.91%), Query Frame = 1
BLAST of Spo11590.1 vs. ExPASy Swiss-Prot
Match: SWET7_ARATH (Bidirectional sugar transporter SWEET7 OS=Arabidopsis thaliana GN=SWEET7 PE=1 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 5.400e-59 Identity = 110/220 (50.00%), Postives = 160/220 (72.73%), Query Frame = 1
BLAST of Spo11590.1 vs. ExPASy Swiss-Prot
Match: SWT6B_ORYSJ (Bidirectional sugar transporter SWEET6b OS=Oryza sativa subsp. japonica GN=SWEET6B PE=2 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 1.200e-55 Identity = 110/236 (46.61%), Postives = 157/236 (66.53%), Query Frame = 1
BLAST of Spo11590.1 vs. ExPASy Swiss-Prot
Match: SWET4_ORYSJ (Bidirectional sugar transporter SWEET4 OS=Oryza sativa subsp. japonica GN=SWEET4 PE=2 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 6.200e-55 Identity = 113/235 (48.09%), Postives = 159/235 (67.66%), Query Frame = 1
BLAST of Spo11590.1 vs. ExPASy Swiss-Prot
Match: SWET4_ORYSI (Bidirectional sugar transporter SWEET4 OS=Oryza sativa subsp. indica GN=SWEET4 PE=2 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 6.200e-55 Identity = 113/235 (48.09%), Postives = 159/235 (67.66%), Query Frame = 1
BLAST of Spo11590.1 vs. ExPASy Swiss-Prot
Match: SWT6B_ORYSI (Bidirectional sugar transporter SWEET6b OS=Oryza sativa subsp. indica GN=SWEET6B PE=3 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 4.000e-54 Identity = 109/236 (46.19%), Postives = 154/236 (65.25%), Query Frame = 1
BLAST of Spo11590.1 vs. TAIR (Arabidopsis)
Match: AT4G10850.1 (Nodulin MtN3 family protein) HSP 1 Score: 229.2 bits (583), Expect = 3.000e-60 Identity = 110/220 (50.00%), Postives = 160/220 (72.73%), Query Frame = 1
BLAST of Spo11590.1 vs. TAIR (Arabidopsis)
Match: AT1G66770.1 (Nodulin MtN3 family protein) HSP 1 Score: 209.9 bits (533), Expect = 1.900e-54 Identity = 113/243 (46.50%), Postives = 156/243 (64.20%), Query Frame = 1
BLAST of Spo11590.1 vs. TAIR (Arabidopsis)
Match: AT5G62850.1 (Nodulin MtN3 family protein) HSP 1 Score: 203.8 bits (517), Expect = 1.400e-52 Identity = 97/219 (44.29%), Postives = 152/219 (69.41%), Query Frame = 1
BLAST of Spo11590.1 vs. TAIR (Arabidopsis)
Match: AT3G28007.1 (Nodulin MtN3 family protein) HSP 1 Score: 189.5 bits (480), Expect = 2.700e-48 Identity = 98/229 (42.79%), Postives = 147/229 (64.19%), Query Frame = 1
BLAST of Spo11590.1 vs. TAIR (Arabidopsis)
Match: AT5G40260.1 (Nodulin MtN3 family protein) HSP 1 Score: 172.6 bits (436), Expect = 3.400e-43 Identity = 102/237 (43.04%), Postives = 146/237 (61.60%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo11590.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo11590.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo11590.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo11590.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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