Spo11558 (gene)

Overview
NameSpo11558
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr4 : 27181030 .. 27183068 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGGGTGTTCTGTGTGTGAATGTCCGACGATGAGGGTTTTTGAGTTTTTGGGATTAAGTGTTTCCCCTTTGATTGTCGAAGGTAAGGCAATTGTAGTTTTTAATGGGCTTGTCCATGATGATACTACTTTTGAGGGTAGTATGTCAGGCGTGAAGATGGAGAAAGAGAGTCGTAGGGGTGACTATTGGAGTGTATGGTATTCACGGGGTTTGGTGGTTTATTTCAGGTTGTTGATGAGATGTGCTCTCATTACCTTCACAAATGTTTATCCGAAGACTGCTCCCCAAATGAAAAGGTTGGGGGTTCATAGCATGTTAACTAATCCTAGTCCTTCTTGGTCAATGAGAGGACTGTGTGTACCCGTTCTTAAGGGTGTCTTGCTTGTCCTTGAGCATTTCCCATTGCTTACAAGGTTGTTGCAACCATTTCGTGAAATTTTTATCGTTCTGTGTTCTTTCGTCCTCTTTCAGGTTTTACAAGTTCGGAGTTTTCCTTACTGTTTATTGCCCAAGCTACATCCCAAGTGAAAAAAGAAATGTGAGTGTGCAAGGTGGAGGAGACGATCAAAGGCCAACAAGCAGAGTATTAATTATATTTGTAGTTTGTAATGTTAATATGTAACTTTTCTGTATTAATAAATGTTGACAATAGCCAATGTAAAAAAAAAAAAACCTTAATGTAATACTTTTTTGCGAAAGACAACCTAAGAGAAGTTTCCGGCATTGACTAAGCTTTTTGGGCCATTGACTTGCACATGTAGCTTCATTTTCTTACATTTTCAATAAAACGCAATGTGAAAGTGATGTTTATTGGTAGTGCTCGATTTTGATATATTGTGTCGTGTTTAAGTGAACTTGTTTCGTTTCCACTAAACATGCTCGTTTTTACAAGTTAAATGTAAAATGAAGCCACACGTGCTGCAGACGTGCAAGTTAATGGCCGAGAAAACCCAGTCAATGCAGGAAACTTTCCTTTAGTTGTCTTTCGCAAAAAAAATTAAAATACGTTAAGGTGTGATTTTACAAAAAAAATTATGTAATGTTCTTTCTGGCAAAAATTGGAGTATAAAATGTCATTTTTTGCAAATTTGCCTAAATAATAAGAAAAACATCGTAACCAGCTAGTAACCGCAAAATGTGACTTTATTATTCCGAAAATATTTCAATTTTTAAGTCACTATTTGAGGAGTTTGGTGTCCACGAAAAATATTAAAACGCTATATTTTTTCATGCACTTTTCTAAAATCTAATATTATCAATTTTATTTTTTTAATGTATTACGGAGTACTTCGTATGAGTTACTATACATGCTTGAAATTCAAGCACACATTGTGTTCATTTAGATCTAATAACTATGAAGTATACATATTCTATTACAAAGTGTATGTAATGTTTGATTCATATAATTTTAACTTATTAAGCATAAATATGAAAAATATCCGATCACAAACGTAACTTTTTCAATTATATGAAATATTCGAATTTAAATTTGGCAAAACTTACAAAACGAGCAAAATAAACACCATCAAATACATGTGTCACTTTAAGCACACGGTATATCCGAGAACAAGATATATTTCGTAAGAGAGAGATGGTAAAAAACATTTACTCAAATTTAATGTTTTTATTTTCTGAAATCAGCATAATTTTTTTCATTCATAAGATTGGAGGAGGGGCTTTTCTCAATCTCGTTCTTCTATTACTTGTTGGTTCTTTCGCCGCCGGCCGCAATTTTATCTCTTTTTGTTTTTCTTTTCTTTCCATTTTAGATGTTGAGAAAAGAAATTATTTCAACCCCCAAAAATTAAAATTTCTGTCGTCCCTCCGCCGTGGTCTCCGCCTTCTTCCGCCGTCGATTTGGTGGTTGTCTGGCATTATTTTCTTCTTCTCTCTCCTCAAAATAGGGATTTCTGATTCGCTCGATGTGAATTTCTCTTCGCAATCGGTGAGGAAGTTCTCTTCTTTTCACGAAAATTTATGCATTAATGACTTCGGAATTAGGGTTCTGATCCTGTAAAATTTTTCTTCAGGTTTGA

mRNA sequence

ATGGTTGGGTGTTCTGTGTGTGAATGTCCGACGATGAGGGTTTTTGAGTTTTTGGGATTAAGTGTTTCCCCTTTGATTGTCGAAGATGTTGAGAAAAGAAATTATTTCAACCCCCAAAAATTAAAATTTCTGTCGTCCCTCCGCCGTGGTCTCCGCCTTCTTCCGCCGTCGATTTGGTGGTTGTCTGGCATTATTTTCTTCTTCTCTCTCCTCAAAATAGGGATTTCTGATTCGCTCGATGTGAATTTCTCTTCGCAATCGGTTTGA

Coding sequence (CDS)

ATGGTTGGGTGTTCTGTGTGTGAATGTCCGACGATGAGGGTTTTTGAGTTTTTGGGATTAAGTGTTTCCCCTTTGATTGTCGAAGATGTTGAGAAAAGAAATTATTTCAACCCCCAAAAATTAAAATTTCTGTCGTCCCTCCGCCGTGGTCTCCGCCTTCTTCCGCCGTCGATTTGGTGGTTGTCTGGCATTATTTTCTTCTTCTCTCTCCTCAAAATAGGGATTTCTGATTCGCTCGATGTGAATTTCTCTTCGCAATCGGTTTGA

Protein sequence

MVGCSVCECPTMRVFEFLGLSVSPLIVEDVEKRNYFNPQKLKFLSSLRRGLRLLPPSIWWLSGIIFFFSLLKIGISDSLDVNFSSQSV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo11558.1Spo11558.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo11558.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo11558.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo11558.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo11558.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0009790 embryo development
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0017001 antibiotic catabolic process
biological_process GO:0010286 heat acclimation
biological_process GO:0048653 anther development
biological_process GO:0015031 protein transport
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0008152 metabolic process
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0006464 cellular protein modification process
biological_process GO:0006768 biotin metabolic process
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0006508 proteolysis
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0019497 hexachlorocyclohexane metabolic process
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0010207 photosystem II assembly
biological_process GO:0010206 photosystem II repair
biological_process GO:0009657 plastid organization
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0009637 response to blue light
biological_process GO:0010218 response to far red light
biological_process GO:0010114 response to red light
biological_process GO:0006771 riboflavin metabolic process
biological_process GO:0006364 rRNA processing
biological_process GO:0006750 glutathione biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0046168 glycerol-3-phosphate catabolic process
biological_process GO:0009963 positive regulation of flavonoid biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0046520 sphingoid biosynthetic process
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0042761 very long-chain fatty acid biosynthetic process
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0009755 hormone-mediated signaling pathway
biological_process GO:0043407 negative regulation of MAP kinase activity
biological_process GO:0035335 peptidyl-tyrosine dephosphorylation
biological_process GO:0009737 response to abscisic acid
biological_process GO:0009733 response to auxin
biological_process GO:0006570 tyrosine metabolic process
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0006164 purine nucleotide biosynthetic process
biological_process GO:0045017 glycerolipid biosynthetic process
biological_process GO:0006650 glycerophospholipid metabolic process
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0042318 penicillin biosynthetic process
biological_process GO:0006560 proline metabolic process
biological_process GO:0048481 plant ovule development
biological_process GO:0006591 ornithine metabolic process
biological_process GO:0006526 arginine biosynthetic process
biological_process GO:0008654 phospholipid biosynthetic process
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
cellular_component GO:0031977 thylakoid lumen
cellular_component GO:0009331 glycerol-3-phosphate dehydrogenase complex
cellular_component GO:0016020 membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009348 ornithine carbamoyltransferase complex
cellular_component GO:0005829 cytosol
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009579 thylakoid
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane
cellular_component GO:0032580 Golgi cisterna membrane
cellular_component GO:0005789 endoplasmic reticulum membrane
molecular_function GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity
molecular_function GO:0004416 hydroxyacylglutathione hydrolase activity
molecular_function GO:0018454 acetoacetyl-CoA reductase activity
molecular_function GO:0051287 NAD binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0045703 ketoreductase activity
molecular_function GO:0004725 protein tyrosine phosphatase activity
molecular_function GO:0008800 beta-lactamase activity
molecular_function GO:0004585 ornithine carbamoyltransferase activity
molecular_function GO:0008138 protein tyrosine/serine/threonine phosphatase activity
molecular_function GO:0016597 amino acid binding
molecular_function GO:0003993 acid phosphatase activity
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004721 phosphoprotein phosphatase activity
molecular_function GO:0008375 acetylglucosaminyltransferase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo087130.79Barchart | Table
Spo154610.77Barchart | Table
Spo270810.73Barchart | Table
Spo053070.73Barchart | Table
Spo235490.73Barchart | Table
Spo251070.72Barchart | Table
Spo175780.72Barchart | Table
Spo266100.72Barchart | Table
Spo003440.72Barchart | Table
Spo095540.71Barchart | Table
Spo096710.71Barchart | Table
Spo102350.71Barchart | Table
Spo131610.71Barchart | Table
Spo108980.71Barchart | Table
Spo233320.71Barchart | Table
Spo010570.71Barchart | Table
Spo212150.71Barchart | Table
Spo209300.71Barchart | Table
Spo142250.71Barchart | Table
Spo089350.70Barchart | Table
Spo247360.70Barchart | Table
Spo062930.70Barchart | Table
Spo061640.70Barchart | Table
Spo161860.70Barchart | Table
Spo216600.70Barchart | Table
Spo088500.70Barchart | Table
Spo096050.69Barchart | Table
Spo033620.69Barchart | Table
Spo152220.69Barchart | Table
Spo021060.69Barchart | Table
Spo028900.68Barchart | Table
Spo051250.68Barchart | Table
Spo053410.68Barchart | Table
Spo065050.68Barchart | Table
Spo089970.68Barchart | Table
Spo104910.68Barchart | Table
Spo165250.68Barchart | Table
Spo167970.68Barchart | Table
Spo228110.68Barchart | Table
Spo238570.68Barchart | Table
Spo243250.68Barchart | Table
Spo250080.68Barchart | Table
Spo255730.68Barchart | Table
Spo258760.68Barchart | Table
Spo209120.67Barchart | Table
Spo063620.67Barchart | Table
Spo010680.67Barchart | Table
Spo264300.67Barchart | Table
Spo162400.67Barchart | Table
Spo268580.67Barchart | Table
Spo169960.67Barchart | Table
Spo015110.67Barchart | Table
Spo182850.67Barchart | Table
Spo193410.67Barchart | Table
Spo084070.66Barchart | Table
Spo162930.66Barchart | Table
Spo273640.66Barchart | Table
Spo066960.66Barchart | Table
Spo054020.66Barchart | Table
Spo217310.66Barchart | Table
Spo225830.66Barchart | Table
Spo016280.66Barchart | Table
Spo250430.66Barchart | Table
Spo108350.66Barchart | Table
Spo125050.66Barchart | Table
Spo108150.66Barchart | Table
Spo093870.66Barchart | Table
Spo149140.66Barchart | Table
Spo086200.66Barchart | Table
Spo116880.65Barchart | Table
Spo222760.65Barchart | Table
Spo069530.65Barchart | Table
Spo059420.65Barchart | Table
Spo027920.65Barchart | Table
Spo019250.65Barchart | Table
Spo211550.65Barchart | Table
Spo282650.65Barchart | Table
Spo158430.65Barchart | Table
Spo010540.65Barchart | Table