Spo11488 (gene) | SpinachBase

Overview


Name	Spo11488
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Unknown protein
Location	chr4 : 51829054 .. 51829935 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGACTCCATCTTCAGATGCAGATAGCAACTCCACTGTTGATGCCTCTCGGCCTTTTCACTCGGTCAAAGAGGCGGTTGCCATTTTTGGGAAACGAGTTCAGTCTCCTTCTGCCTTTGGTAAGGTTAAACTATCATCTTCATCTGAGTTTACACCAAACTCAGAAAACCCTCTTGGTATTGCTATTGAAATTGGGACGCCGGATTCATACGAGTTTACACAAAGTCCTTGTATACCTCCGAGCATTAGTTCCAAACAAGTTGTAGACTCACCTGTGTATGAACCTACACCAAGTCCTGAAATTTCCAAAAATGATTCTTCTTCAAGTTTTCCTAGCACTTCTAGCAAAGAAATTGAACCAATACCAAGTCCTGAAAACCCGAAAAACACCAAGCATGGTAAAATAGTACATGGGAATGATTTAGTGATGATGTTGATGATATTAAAGAGACTAGAAAGTGAGTTGCAAGAAACAAAGATGGAAGTGAAGTTGCTCAAGGAGAGAGAATCCGAGACTGAGGTCGCCGTAGCTTCCTTGAATGCAGAGTTCCACAAGAACATGTCTAAGATATCCAAACCTGAGGCTGCTGAAGCAGGAAAAGCTACAGCCAGTTCTGCAGCATCGGTTGAGGAAGGAAATCAAGACACGGGAACGAGAGATGAAGAAGGAAGAAAATTTGAAGTGATGGTGAAAAATGTAGACTCACCAACATTAGCTCAAATATTGAACATTAGTGACTATGATTGCTATTTTGGAGACAGAAAGAAGCTGAAGAAAAAGATGAAGCCTGTAATTCCTTTGGTTACAGATATATTTGCATGGAGGAAGAGATCAACACCAACCAAAACTCTTTCTACTCGTTTATATTCTTGGAAGTGA

mRNA sequence

ATGGAGACTCCATCTTCAGATGCAGATAGCAACTCCACTGTTGATGCCTCTCGGCCTTTTCACTCGGTCAAAGAGGCGGTTGCCATTTTTGGGAAACGAGTTCAGTCTCCTTCTGCCTTTGGTAAGGTTAAACTATCATCTTCATCTGAGTTTACACCAAACTCAGAAAACCCTCTTGGTATTGCTATTGAAATTGGGACGCCGGATTCATACGAGTTTACACAAAGTCCTTGTATACCTCCGAGCATTAGTTCCAAACAAGTTGTAGACTCACCTGTGTATGAACCTACACCAAGTCCTGAAATTTCCAAAAATGATTCTTCTTCAAGTTTTCCTAGCACTTCTAGCAAAGAAATTGAACCAATACCAAGTCCTGAAAACCCGAAAAACACCAAGCATGGTAAAATAGTACATGGGAATGATTTAGTGATGATGTTGATGATATTAAAGAGACTAGAAAGTGAGTTGCAAGAAACAAAGATGGAAGTGAAGTTGCTCAAGGAGAGAGAATCCGAGACTGAGGTCGCCGTAGCTTCCTTGAATGCAGAGTTCCACAAGAACATGTCTAAGATATCCAAACCTGAGGCTGCTGAAGCAGGAAAAGCTACAGCCAGTTCTGCAGCATCGGTTGAGGAAGGAAATCAAGACACGGGAACGAGAGATGAAGAAGGAAGAAAATTTGAAGTGATGGTGAAAAATGTAGACTCACCAACATTAGCTCAAATATTGAACATTAGTGACTATGATTGCTATTTTGGAGACAGAAAGAAGCTGAAGAAAAAGATGAAGCCTGTAATTCCTTTGGTTACAGATATATTTGCATGGAGGAAGAGATCAACACCAACCAAAACTCTTTCTACTCGTTTATATTCTTGGAAGTGA

Coding sequence (CDS)

ATGGAGACTCCATCTTCAGATGCAGATAGCAACTCCACTGTTGATGCCTCTCGGCCTTTTCACTCGGTCAAAGAGGCGGTTGCCATTTTTGGGAAACGAGTTCAGTCTCCTTCTGCCTTTGGTAAGGTTAAACTATCATCTTCATCTGAGTTTACACCAAACTCAGAAAACCCTCTTGGTATTGCTATTGAAATTGGGACGCCGGATTCATACGAGTTTACACAAAGTCCTTGTATACCTCCGAGCATTAGTTCCAAACAAGTTGTAGACTCACCTGTGTATGAACCTACACCAAGTCCTGAAATTTCCAAAAATGATTCTTCTTCAAGTTTTCCTAGCACTTCTAGCAAAGAAATTGAACCAATACCAAGTCCTGAAAACCCGAAAAACACCAAGCATGGTAAAATAGTACATGGGAATGATTTAGTGATGATGTTGATGATATTAAAGAGACTAGAAAGTGAGTTGCAAGAAACAAAGATGGAAGTGAAGTTGCTCAAGGAGAGAGAATCCGAGACTGAGGTCGCCGTAGCTTCCTTGAATGCAGAGTTCCACAAGAACATGTCTAAGATATCCAAACCTGAGGCTGCTGAAGCAGGAAAAGCTACAGCCAGTTCTGCAGCATCGGTTGAGGAAGGAAATCAAGACACGGGAACGAGAGATGAAGAAGGAAGAAAATTTGAAGTGATGGTGAAAAATGTAGACTCACCAACATTAGCTCAAATATTGAACATTAGTGACTATGATTGCTATTTTGGAGACAGAAAGAAGCTGAAGAAAAAGATGAAGCCTGTAATTCCTTTGGTTACAGATATATTTGCATGGAGGAAGAGATCAACACCAACCAAAACTCTTTCTACTCGTTTATATTCTTGGAAGTGA

Protein sequence

METPSSDADSNSTVDASRPFHSVKEAVAIFGKRVQSPSAFGKVKLSSSSEFTPNSENPLGIAIEIGTPDSYEFTQSPCIPPSISSKQVVDSPVYEPTPSPEISKNDSSSSFPSTSSKEIEPIPSPENPKNTKHGKIVHGNDLVMMLMILKRLESELQETKMEVKLLKERESETEVAVASLNAEFHKNMSKISKPEAAEAGKATASSAASVEEGNQDTGTRDEEGRKFEVMVKNVDSPTLAQILNISDYDCYFGDRKKLKKKMKPVIPLVTDIFAWRKRSTPTKTLSTRLYSWK

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo11488.1	Spo11488.1	mRNA

Homology

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BLAST of Spo11488.1 vs. NCBI nr
Match: gi|902173367|gb|KNA08253.1| (hypothetical protein SOVF_164080 [Spinacia oleracea])

HSP 1 Score: 553.9 bits (1426), Expect = 1.700e-154
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 1


		  
Query: 1   METPSSDADSNSTVDASRPFHSVKEAVAIFGKRVQSPSAFGKVKLSSSSEFTPNSENPLG 60
           METPSSDADSNSTVDASRPFHSVKEAVAIFGKRVQSPSAFGKVKLSSSSEFTPNSENPLG
Sbjct: 1   METPSSDADSNSTVDASRPFHSVKEAVAIFGKRVQSPSAFGKVKLSSSSEFTPNSENPLG 60

Query: 61  IAIEIGTPDSYEFTQSPCIPPSISSKQVVDSPVYEPTPSPEISKNDSSSSFPSTSSKEIE 120
           IAIEIGTPDSYEFTQSPCIPPSISSKQVVDSPVYEPTPSPEISKNDSSSSFPSTSSKEIE
Sbjct: 61  IAIEIGTPDSYEFTQSPCIPPSISSKQVVDSPVYEPTPSPEISKNDSSSSFPSTSSKEIE 120

Query: 121 PIPSPENPKNTKHGKIVHGNDLVMMLMILKRLESELQETKMEVKLLKERESETEVAVASL 180
           PIPSPENPKNTKHGKIVHGNDLVMMLMILKRLESELQETKMEVKLLKERESETEVAVASL
Sbjct: 121 PIPSPENPKNTKHGKIVHGNDLVMMLMILKRLESELQETKMEVKLLKERESETEVAVASL 180

Query: 181 NAEFHKNMSKISKPEAAEAGKATASSAASVEEGNQDTGTRDEEGRKFEVMVKNVDSPTLA 240
           NAEFHKNMSKISKPEAAEAGKATASSAASVEEGNQDTGTRDEEGRKFEVMVKNVDSPTLA
Sbjct: 181 NAEFHKNMSKISKPEAAEAGKATASSAASVEEGNQDTGTRDEEGRKFEVMVKNVDSPTLA 240

Query: 241 QILNISDYDCYFGDRKKLKKKMKPVIPLVTDIFAWRKRSTPTKTLSTRLYSWK 294
           QILNISDYDCYFGDRKKLKKKMKPVIPLVTDIFAWRKRSTPTKTLSTRLYSWK
Sbjct: 241 QILNISDYDCYFGDRKKLKKKMKPVIPLVTDIFAWRKRSTPTKTLSTRLYSWK 293

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BLAST of Spo11488.1 vs. NCBI nr
Match: gi|731365768|ref|XP_010694704.1| (PREDICTED: uncharacterized protein LOC104907469 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 302.4 bits (773), Expect = 8.800e-79
Identity = 190/310 (61.29%), Postives = 221/310 (71.29%), Query Frame = 1


		  
Query: 5   SSDADSNSTVDASRPFHSVKEAVAIFGKRV---------QSPSAFGKVKLSSSSEFTPNS 64
           + DADSNS VD SRPFHSVKEAVAIFGKR+         + PS+      S SSEFTP+S
Sbjct: 9   TGDADSNSVVDVSRPFHSVKEAVAIFGKRILLREIPSRLEPPSSDIGEVTSPSSEFTPSS 68

Query: 65  ENPLGIAIEIGTPDSYEFTQSPCIPPSISSKQVVDSPVYEPTPSPEISKN-DSSSSF--- 124
           E   G A+EI    S EF ++P    SI+SK  VDS V +P PSP   +N + S SF   
Sbjct: 69  EKAPGFAVEIC---SSEFMETPDRTLSIASKGTVDSSVEQPAPSPRTPENVNHSPSFSSG 128

Query: 125 ------PSTSSKEI------EPIPSPENPKNTKHGKIVHGNDLVMMLMILKRLESELQET 184
                 P  SSK I      EP PSP+N KN  HGKIVHGNDLVMMLMILKRLESELQET
Sbjct: 129 KDIPPPPCISSKGIVSSSTNEPAPSPQNLKNDSHGKIVHGNDLVMMLMILKRLESELQET 188

Query: 185 KMEVKLLKERESETEVAVASLNAEFHKNMSKISKPEAAEAGKATASSAAS-VEEGNQDTG 244
           KME+KLLKERES+TEVA+ASLNAE HKNMSKI+K EA EA  A A+ AA+  +EG ++  
Sbjct: 189 KMELKLLKERESKTEVALASLNAELHKNMSKIAKVEATEAVNAVANPAATFTDEGTREIS 248

Query: 245 TRDEEGRKFEVMVKNVDSPTLAQILNISDYDCYFGDRKKLKK--KMKPVIPLVTDIFAWR 287
           +RDEE +KFEVM+KNVDSPTLAQIL+ISDYDCYFG  KK+KK  K KP+IPLVTDI  WR
Sbjct: 249 SRDEERKKFEVMLKNVDSPTLAQILSISDYDCYFGHNKKVKKAMKKKPIIPLVTDIIPWR 308

[Close]

BLAST of Spo11488.1 vs. NCBI nr
Match: gi|297837633|ref|XP_002886698.1| (hypothetical protein ARALYDRAFT_475417 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 146.7 bits (369), Expect = 6.200e-32
Identity = 118/283 (41.70%), Postives = 161/283 (56.89%), Query Frame = 1


		  
Query: 14  VDASRPFHSVKEAVAIFGKRVQSPSAFGKVKLSSSSEFTPNSENPLGIAIEIGTPDSYEF 73
           VD SRPF SVKEAVAIFG+R+  P    +    +S   +P +   +    +  +P   + 
Sbjct: 10  VDTSRPFSSVKEAVAIFGQRIMLPV---QTHTLNSKPVSPIANRSISQTDKPRSPGLSQT 69

Query: 74  TQ--SPCIPPSISSKQVVDSPVYEPTPSPEISKNDSSSSFPSTSSKEIEPIPSPENPKNT 133
            +  SP   P IS    + SP+     SP IS+  SSSS      + + P  SP+ PK+ 
Sbjct: 70  AKLVSPTASPKISQTAKLVSPI----ASPNISQTASSSS--PWKQRSLLP-SSPQGPKDE 129

Query: 134 KHGKIVHGNDLVMMLMILKRLESELQETKMEVKLLKERESETEVAVASLNAEFHKNMSKI 193
                        ++ +LK+LE+E+ ETK EVK+LKERESETEVA+A+LNAE HKNMSKI
Sbjct: 130 -------------IMDVLKKLEAEITETKTEVKMLKERESETEVALATLNAELHKNMSKI 189

Query: 194 SKPEAAEAGKATASSAASVE-EGNQDTGTRDEEGRKFEVMVKNVDSPTLAQIL--NISDY 253
           +K EA  AGK+ A+   SV  +  Q+   R+++ RK  +     + P+LAQIL  N  D 
Sbjct: 190 AKAEADAAGKSAAAMEKSVRFKDTQEKENREDQRRKELMRKMQKEYPSLAQILDSNKGDK 249

Query: 254 DCYFGDRKKLKKKMKPVIPLVTDIFAWRKRSTPTKTLSTRLYS 292
           D YF   KK KKK KP+IPLV D F +RK+  P   +S  LY+
Sbjct: 250 DGYFAKTKKTKKKKKPIIPLVGDFFFFRKKG-PATEISGPLYT 268

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BLAST of Spo11488.1 vs. NCBI nr
Match: gi|15217835|ref|NP_176104.1| (uncharacterized protein [Arabidopsis thaliana])

HSP 1 Score: 144.4 bits (363), Expect = 3.100e-31
Identity = 121/291 (41.58%), Postives = 161/291 (55.33%), Query Frame = 1


		  
Query: 14  VDASRPFHSVKEAVAIFGKRVQSPSAFGKVKLSSSSEFTPNSENPLGIAIEIGTPDSYEF 73
           VD SRPF SVKEAVAIFG+R+  P     +   S+S    +         +   P S   
Sbjct: 17  VDTSRPFSSVKEAVAIFGQRIMLPVQTHTMNSKSASPIAASRS-----INQNAKPRSPGL 76

Query: 74  TQS-----PCIPPSISSKQVVDSPVYEPTPSPEISKNDSSSSFPSTSSKEIEPIPSPENP 133
           +Q+     P   PSIS    + SP+     SP IS+  SSSS P    + + P PSP+ P
Sbjct: 77  SQTVKLVIPTASPSISQTAKLVSPI----ASPSISQTASSSSSP-WKQRSLLP-PSPQGP 136

Query: 134 KNTKHGKIVHGNDLVMMLMILKRLESELQETKMEVKLLKERESETEVAVASLNAEFHKNM 193
           K               ++ +LK+LE+E+ ETK EVK+LKERESETEVA+A+LNAE HKN 
Sbjct: 137 KEE-------------IMDVLKKLEAEITETKTEVKMLKERESETEVALATLNAELHKNK 196

Query: 194 SKISKPEAAEAGKATASSAASVEEGNQDTGTRDEEGRKFEVMVK-NVDSPTLAQIL--NI 253
           SKI+K EA  AGK+ A+   SV   +       E+ R+ E+M K   + P+LAQIL  N 
Sbjct: 197 SKIAKAEADAAGKSAAAMTKSVSFKDTKEKENGEDQRRKELMRKMQKEYPSLAQILDSNK 256

Query: 254 SDYDCYFGDRKKLKKKMKPVIPLVTDIFAWRKR------STPTKTLSTRLY 291
            + D YF + KK KKK KP+IPLV D F ++K+      S P  T S+ L+
Sbjct: 257 GNRDGYFANTKKTKKKKKPIIPLVGDFFFFKKKGSSPEISGPLYTTSSTLH 283

[Close]

BLAST of Spo11488.1 vs. NCBI nr
Match: gi|565487427|ref|XP_006301353.1| (hypothetical protein CARUB_v10021763mg [Capsella rubella])

HSP 1 Score: 142.9 bits (359), Expect = 8.900e-31
Identity = 112/279 (40.14%), Postives = 164/279 (58.78%), Query Frame = 1


		  
Query: 9   DSNSTVDASRPFHSVKEAVAIFGKRVQSPSAFGKVKLSSSSEFTPNSENPLGIAIEIGTP 68
           + N+ VD SRPF SVKEAVAIFG+R+  P+   + +  +S+  +P +   + +A      
Sbjct: 8   EGNNHVDTSRPFSSVKEAVAIFGQRIVLPT---QTQTLNSNLASPIATRSISLA------ 67

Query: 69  DSYEFTQSPCIPPSISSKQVVDSPVYEPTPSPEISKNDSSSSFPSTSSKEIEPIPS-PEN 128
              +  ++P   PS S   ++ SP+     SP IS+   ++S PS+  K+   +PS P+ 
Sbjct: 68  ---DKPRTPIASPSFSQTAMLVSPI----ASPSISQ---TASLPSSPWKQRSLLPSSPQG 127

Query: 129 PKNTKHGKIVHGNDLVMMLMILKRLESELQETKMEVKLLKERESETEVAVASLNAEFHKN 188
           PK               ++ +LK+LE+E+ ETK EVK+LKERESETEVA+A+LNAE HKN
Sbjct: 128 PKEE-------------IMDVLKKLEAEITETKTEVKMLKERESETEVALATLNAELHKN 187

Query: 189 MSKISKPEAAEAGKATASSAASVE-EGNQDTGTRDEEGRKFEVMVKNVDSPTLAQIL--N 248
           MSK++K EA  AGK+ A+ A SV  +  ++  + +EE RK        + P+LAQIL  N
Sbjct: 188 MSKMAKAEADAAGKSAAAIAKSVSFKETKEKESGEEERRKELTRRIQKEYPSLAQILESN 247

Query: 249 ISDYDCYFGDRKKLKKKMKPVIPLVTDIFAWRKRSTPTK 284
             D D YF    K KKK KP+IPLV + F  +K+ + T+
Sbjct: 248 KGDRDGYFAKTTKKKKKKKPIIPLVGNFFLCKKKGSSTE 254

[Close]

BLAST of Spo11488.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNH7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_164080 PE=4 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 1.200e-154
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 1


		  
Query: 1   METPSSDADSNSTVDASRPFHSVKEAVAIFGKRVQSPSAFGKVKLSSSSEFTPNSENPLG 60
           METPSSDADSNSTVDASRPFHSVKEAVAIFGKRVQSPSAFGKVKLSSSSEFTPNSENPLG
Sbjct: 1   METPSSDADSNSTVDASRPFHSVKEAVAIFGKRVQSPSAFGKVKLSSSSEFTPNSENPLG 60

Query: 61  IAIEIGTPDSYEFTQSPCIPPSISSKQVVDSPVYEPTPSPEISKNDSSSSFPSTSSKEIE 120
           IAIEIGTPDSYEFTQSPCIPPSISSKQVVDSPVYEPTPSPEISKNDSSSSFPSTSSKEIE
Sbjct: 61  IAIEIGTPDSYEFTQSPCIPPSISSKQVVDSPVYEPTPSPEISKNDSSSSFPSTSSKEIE 120

Query: 121 PIPSPENPKNTKHGKIVHGNDLVMMLMILKRLESELQETKMEVKLLKERESETEVAVASL 180
           PIPSPENPKNTKHGKIVHGNDLVMMLMILKRLESELQETKMEVKLLKERESETEVAVASL
Sbjct: 121 PIPSPENPKNTKHGKIVHGNDLVMMLMILKRLESELQETKMEVKLLKERESETEVAVASL 180

Query: 181 NAEFHKNMSKISKPEAAEAGKATASSAASVEEGNQDTGTRDEEGRKFEVMVKNVDSPTLA 240
           NAEFHKNMSKISKPEAAEAGKATASSAASVEEGNQDTGTRDEEGRKFEVMVKNVDSPTLA
Sbjct: 181 NAEFHKNMSKISKPEAAEAGKATASSAASVEEGNQDTGTRDEEGRKFEVMVKNVDSPTLA 240

Query: 241 QILNISDYDCYFGDRKKLKKKMKPVIPLVTDIFAWRKRSTPTKTLSTRLYSWK 294
           QILNISDYDCYFGDRKKLKKKMKPVIPLVTDIFAWRKRSTPTKTLSTRLYSWK
Sbjct: 241 QILNISDYDCYFGDRKKLKKKMKPVIPLVTDIFAWRKRSTPTKTLSTRLYSWK 293

[Close]

BLAST of Spo11488.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BDZ2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g095090 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 6.100e-79
Identity = 190/310 (61.29%), Postives = 221/310 (71.29%), Query Frame = 1


		  
Query: 5   SSDADSNSTVDASRPFHSVKEAVAIFGKRV---------QSPSAFGKVKLSSSSEFTPNS 64
           + DADSNS VD SRPFHSVKEAVAIFGKR+         + PS+      S SSEFTP+S
Sbjct: 9   TGDADSNSVVDVSRPFHSVKEAVAIFGKRILLREIPSRLEPPSSDIGEVTSPSSEFTPSS 68

Query: 65  ENPLGIAIEIGTPDSYEFTQSPCIPPSISSKQVVDSPVYEPTPSPEISKN-DSSSSF--- 124
           E   G A+EI    S EF ++P    SI+SK  VDS V +P PSP   +N + S SF   
Sbjct: 69  EKAPGFAVEIC---SSEFMETPDRTLSIASKGTVDSSVEQPAPSPRTPENVNHSPSFSSG 128

Query: 125 ------PSTSSKEI------EPIPSPENPKNTKHGKIVHGNDLVMMLMILKRLESELQET 184
                 P  SSK I      EP PSP+N KN  HGKIVHGNDLVMMLMILKRLESELQET
Sbjct: 129 KDIPPPPCISSKGIVSSSTNEPAPSPQNLKNDSHGKIVHGNDLVMMLMILKRLESELQET 188

Query: 185 KMEVKLLKERESETEVAVASLNAEFHKNMSKISKPEAAEAGKATASSAAS-VEEGNQDTG 244
           KME+KLLKERES+TEVA+ASLNAE HKNMSKI+K EA EA  A A+ AA+  +EG ++  
Sbjct: 189 KMELKLLKERESKTEVALASLNAELHKNMSKIAKVEATEAVNAVANPAATFTDEGTREIS 248

Query: 245 TRDEEGRKFEVMVKNVDSPTLAQILNISDYDCYFGDRKKLKK--KMKPVIPLVTDIFAWR 287
           +RDEE +KFEVM+KNVDSPTLAQIL+ISDYDCYFG  KK+KK  K KP+IPLVTDI  WR
Sbjct: 249 SRDEERKKFEVMLKNVDSPTLAQILSISDYDCYFGHNKKVKKAMKKKPIIPLVTDIIPWR 308

[Close]

BLAST of Spo11488.1 vs. UniProtKB/TrEMBL
Match: D7KY76_ARALL (Putative uncharacterized protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_475417 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.300e-32
Identity = 118/283 (41.70%), Postives = 161/283 (56.89%), Query Frame = 1


		  
Query: 14  VDASRPFHSVKEAVAIFGKRVQSPSAFGKVKLSSSSEFTPNSENPLGIAIEIGTPDSYEF 73
           VD SRPF SVKEAVAIFG+R+  P    +    +S   +P +   +    +  +P   + 
Sbjct: 10  VDTSRPFSSVKEAVAIFGQRIMLPV---QTHTLNSKPVSPIANRSISQTDKPRSPGLSQT 69

Query: 74  TQ--SPCIPPSISSKQVVDSPVYEPTPSPEISKNDSSSSFPSTSSKEIEPIPSPENPKNT 133
            +  SP   P IS    + SP+     SP IS+  SSSS      + + P  SP+ PK+ 
Sbjct: 70  AKLVSPTASPKISQTAKLVSPI----ASPNISQTASSSS--PWKQRSLLP-SSPQGPKDE 129

Query: 134 KHGKIVHGNDLVMMLMILKRLESELQETKMEVKLLKERESETEVAVASLNAEFHKNMSKI 193
                        ++ +LK+LE+E+ ETK EVK+LKERESETEVA+A+LNAE HKNMSKI
Sbjct: 130 -------------IMDVLKKLEAEITETKTEVKMLKERESETEVALATLNAELHKNMSKI 189

Query: 194 SKPEAAEAGKATASSAASVE-EGNQDTGTRDEEGRKFEVMVKNVDSPTLAQIL--NISDY 253
           +K EA  AGK+ A+   SV  +  Q+   R+++ RK  +     + P+LAQIL  N  D 
Sbjct: 190 AKAEADAAGKSAAAMEKSVRFKDTQEKENREDQRRKELMRKMQKEYPSLAQILDSNKGDK 249

Query: 254 DCYFGDRKKLKKKMKPVIPLVTDIFAWRKRSTPTKTLSTRLYS 292
           D YF   KK KKK KP+IPLV D F +RK+  P   +S  LY+
Sbjct: 250 DGYFAKTKKTKKKKKPIIPLVGDFFFFRKKG-PATEISGPLYT 268

[Close]

BLAST of Spo11488.1 vs. UniProtKB/TrEMBL
Match: Q9C6F8_ARATH (At1g58070 OS=Arabidopsis thaliana GN=T15M6.8 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.100e-31
Identity = 121/291 (41.58%), Postives = 161/291 (55.33%), Query Frame = 1


		  
Query: 14  VDASRPFHSVKEAVAIFGKRVQSPSAFGKVKLSSSSEFTPNSENPLGIAIEIGTPDSYEF 73
           VD SRPF SVKEAVAIFG+R+  P     +   S+S    +         +   P S   
Sbjct: 17  VDTSRPFSSVKEAVAIFGQRIMLPVQTHTMNSKSASPIAASRS-----INQNAKPRSPGL 76

Query: 74  TQS-----PCIPPSISSKQVVDSPVYEPTPSPEISKNDSSSSFPSTSSKEIEPIPSPENP 133
           +Q+     P   PSIS    + SP+     SP IS+  SSSS P    + + P PSP+ P
Sbjct: 77  SQTVKLVIPTASPSISQTAKLVSPI----ASPSISQTASSSSSP-WKQRSLLP-PSPQGP 136

Query: 134 KNTKHGKIVHGNDLVMMLMILKRLESELQETKMEVKLLKERESETEVAVASLNAEFHKNM 193
           K               ++ +LK+LE+E+ ETK EVK+LKERESETEVA+A+LNAE HKN 
Sbjct: 137 KEE-------------IMDVLKKLEAEITETKTEVKMLKERESETEVALATLNAELHKNK 196

Query: 194 SKISKPEAAEAGKATASSAASVEEGNQDTGTRDEEGRKFEVMVK-NVDSPTLAQIL--NI 253
           SKI+K EA  AGK+ A+   SV   +       E+ R+ E+M K   + P+LAQIL  N 
Sbjct: 197 SKIAKAEADAAGKSAAAMTKSVSFKDTKEKENGEDQRRKELMRKMQKEYPSLAQILDSNK 256

Query: 254 SDYDCYFGDRKKLKKKMKPVIPLVTDIFAWRKR------STPTKTLSTRLY 291
            + D YF + KK KKK KP+IPLV D F ++K+      S P  T S+ L+
Sbjct: 257 GNRDGYFANTKKTKKKKKPIIPLVGDFFFFKKKGSSPEISGPLYTTSSTLH 283

[Close]

BLAST of Spo11488.1 vs. UniProtKB/TrEMBL
Match: R0GF14_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10021763mg PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 6.200e-31
Identity = 112/279 (40.14%), Postives = 164/279 (58.78%), Query Frame = 1


		  
Query: 9   DSNSTVDASRPFHSVKEAVAIFGKRVQSPSAFGKVKLSSSSEFTPNSENPLGIAIEIGTP 68
           + N+ VD SRPF SVKEAVAIFG+R+  P+   + +  +S+  +P +   + +A      
Sbjct: 8   EGNNHVDTSRPFSSVKEAVAIFGQRIVLPT---QTQTLNSNLASPIATRSISLA------ 67

Query: 69  DSYEFTQSPCIPPSISSKQVVDSPVYEPTPSPEISKNDSSSSFPSTSSKEIEPIPS-PEN 128
              +  ++P   PS S   ++ SP+     SP IS+   ++S PS+  K+   +PS P+ 
Sbjct: 68  ---DKPRTPIASPSFSQTAMLVSPI----ASPSISQ---TASLPSSPWKQRSLLPSSPQG 127

Query: 129 PKNTKHGKIVHGNDLVMMLMILKRLESELQETKMEVKLLKERESETEVAVASLNAEFHKN 188
           PK               ++ +LK+LE+E+ ETK EVK+LKERESETEVA+A+LNAE HKN
Sbjct: 128 PKEE-------------IMDVLKKLEAEITETKTEVKMLKERESETEVALATLNAELHKN 187

Query: 189 MSKISKPEAAEAGKATASSAASVE-EGNQDTGTRDEEGRKFEVMVKNVDSPTLAQIL--N 248
           MSK++K EA  AGK+ A+ A SV  +  ++  + +EE RK        + P+LAQIL  N
Sbjct: 188 MSKMAKAEADAAGKSAAAIAKSVSFKETKEKESGEEERRKELTRRIQKEYPSLAQILESN 247

Query: 249 ISDYDCYFGDRKKLKKKMKPVIPLVTDIFAWRKRSTPTK 284
             D D YF    K KKK KP+IPLV + F  +K+ + T+
Sbjct: 248 KGDRDGYFAKTTKKKKKKKPIIPLVGNFFLCKKKGSSTE 254

[Close]

BLAST of Spo11488.1 vs. TAIR (Arabidopsis)
Match: AT1G58070.1 (unknown protein)

HSP 1 Score: 144.4 bits (363), Expect = 1.100e-34
Identity = 121/291 (41.58%), Postives = 161/291 (55.33%), Query Frame = 1


		  
Query: 14  VDASRPFHSVKEAVAIFGKRVQSPSAFGKVKLSSSSEFTPNSENPLGIAIEIGTPDSYEF 73
           VD SRPF SVKEAVAIFG+R+  P     +   S+S    +         +   P S   
Sbjct: 17  VDTSRPFSSVKEAVAIFGQRIMLPVQTHTMNSKSASPIAASRS-----INQNAKPRSPGL 76

Query: 74  TQS-----PCIPPSISSKQVVDSPVYEPTPSPEISKNDSSSSFPSTSSKEIEPIPSPENP 133
           +Q+     P   PSIS    + SP+     SP IS+  SSSS P    + + P PSP+ P
Sbjct: 77  SQTVKLVIPTASPSISQTAKLVSPI----ASPSISQTASSSSSP-WKQRSLLP-PSPQGP 136

Query: 134 KNTKHGKIVHGNDLVMMLMILKRLESELQETKMEVKLLKERESETEVAVASLNAEFHKNM 193
           K               ++ +LK+LE+E+ ETK EVK+LKERESETEVA+A+LNAE HKN 
Sbjct: 137 KEE-------------IMDVLKKLEAEITETKTEVKMLKERESETEVALATLNAELHKNK 196

Query: 194 SKISKPEAAEAGKATASSAASVEEGNQDTGTRDEEGRKFEVMVK-NVDSPTLAQIL--NI 253
           SKI+K EA  AGK+ A+   SV   +       E+ R+ E+M K   + P+LAQIL  N 
Sbjct: 197 SKIAKAEADAAGKSAAAMTKSVSFKDTKEKENGEDQRRKELMRKMQKEYPSLAQILDSNK 256

Query: 254 SDYDCYFGDRKKLKKKMKPVIPLVTDIFAWRKR------STPTKTLSTRLY 291
            + D YF + KK KKK KP+IPLV D F ++K+      S P  T S+ L+
Sbjct: 257 GNRDGYFANTKKTKKKKKPIIPLVGDFFFFKKKGSSPEISGPLYTTSSTLH 283

The following BLAST results are available for this feature:

BLAST of Spo11488.1 vs. NCBI nr
BLAST of Spo11488.1 vs. UniProtKB/TrEMBL
BLAST of Spo11488.1 vs. ExPASy Swiss-Prot
BLAST of Spo11488.1 vs. TAIR (Arabidopsis)

BLAST of Spo11488.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902173367\|gb\|KNA08253.1\|	1.7e-154	100.	hypothetical protein SOVF_1640...	[more]
gi\|731365768\|ref\|XP_010694704.1\|	8.8e-79	61.2	PREDICTED: uncharacterized pro...	[more]
gi\|297837633\|ref\|XP_002886698.1\|	6.2e-32	41.7	hypothetical protein ARALYDRAF...	[more]
gi\|15217835\|ref\|NP_176104.1\|	3.1e-31	41.5	uncharacterized protein [Arabi...	[more]
gi\|565487427\|ref\|XP_006301353.1\|	8.9e-31	40.1	hypothetical protein CARUB_v10...	[more]

BLAST of Spo11488.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QNH7_SPIOL	1.2e-154	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BDZ2_BETVU	6.1e-79	61.2	Uncharacterized protein OS=Bet...	[more]
D7KY76_ARALL	4.3e-32	41.7	Putative uncharacterized prote...	[more]
Q9C6F8_ARATH	2.1e-31	41.5	At1g58070 OS=Arabidopsis thali...	[more]
R0GF14_9BRAS	6.2e-31	40.1	Uncharacterized protein OS=Cap...	[more]

BLAST of Spo11488.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo11488.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G58070.1	1.1e-34	41.5	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 149..169 scor
None	No IPR available	PANTHER	PTHR32054	FAMILY NOT NAMED	coord: 117..291 score: 8.1E-44coord: 8..48 score: 8.1
None	No IPR available	PANTHER	PTHR32054:SF11	SUBFAMILY NOT NAMED	coord: 8..48 score: 8.1E-44coord: 117..291 score: 8.1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071555	cell wall organization
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0006629	lipid metabolic process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0004650	polygalacturonase activity
molecular_function	GO:0016788	hydrolase activity, acting on ester bonds

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo09535	0.66	Barchart \| Table
Spo10762	0.66	Barchart \| Table