Spo11485 (gene)

Overview
NameSpo11485
Typegene
OrganismSpinacia oleracea (Spinach)
Description(Aspartyl aminopeptidase) (Aspartyl aminopeptidase-like protein) (Zn-dependent exopeptidases superfamily protein)
Locationchr4 : 51805313 .. 51807261 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACCGGAAATAATGCCGAACACGGCCTAAGGGATGATAATCCTCTAAAACTTGTAGACAAAAAAAAAATGGCGACCTTTGCAAGACTTCCACTCCTTCAACTACAACCACACCCTAAACTCCTCAAATCTTACTTTCACTCTTCTCGCATCAAATTCAAACTCCCCAATCTCTATTTATCTACCCCTTCTCAAAGCGTCTCGCCATTTCGTTGTTTCTCTTCCAATGTCGATCAAATTCATCAGGTTTTTTTCTTAAATTTTCTCCTCAAATTATTTATCTCATTTTATACAATTATAGTTTAATCAGTTTATTAATTACTTCAATTAACTTGTAGAATTCTTTCCACAACGAATCAGTTGGGTCCATTGTTGGGGATTTGCTGAATTATCTCAATGAATCTTGGACCCAATTTCATGCTACTGGTATGTATCAAGGATATAATTTTCGACATTTGCCATATTTTTTTCCGCTTAATTTCTCCTGTAAATATTGAAATGTTTTAGCTTGTTTTCAAAATATGTTTTTTCTTATGGAAACATGAGGATTATGGTTGTAAACCATGCCTTTGAAACTGGACTTCTATTTGCTAGCATTGGTTATTGATAAGTGTTTTTCGTCGTCGTTGAACGAACGCCACTTCATCAAACTAAATTTGTAGAACACCTGACTAACACACTATATTGGTTATAGGGTTAACTGGTAAGCTTCGGGATCGTCCCAAGAGAGTGGTTCTTCTTTTGATTTATCAACTAGTTGAGCTACAAACTAATTATTTCGGTTTTCAACATTTCATGCACCAAATTCTCAATCTCATCTTTCTGGCTTTGTGGATACCTATATGGTATCACTGGATCAGTACCTTCCTAAGCAAAATCAAAGAAATTAACACACTGAAATCAAAGAAATTTGGTTGTGTGGTGTCCCTAAGCTCCTCTTCCTCATCTTCTTCCTTGAAGTTAACACACTCAACTCTCTATTCTTACATTTATGCCCAATTGTCCACTTTTCATCACATCTAAAACAAAGCCCCTTCTCTTTTTTTGCTCTGCATGCTCTATCACTGAATCTCCTTATCTCTCCAAAAGGTCGATTAGTGTGTTGATTTTGGTTAGGTGTTGAGTTAACTTGGTTAGAGCTGTAAGTGGGATAAGTGTTTTGGCTACAAGTGTTTGGTTTGCAGTTGGGTTGATAATTACCACCTCCTGTTTGAAAAATTAGATCCCAATTTCAACCATTCATGTACTGACCCATTGAAACCTCCTCAGGAACCACCTTTAATTGTGCTGGCAACTCAATAAACCGACGCCTATACAGTATACACCAACACCGTACCCTATCCACCTATCGGTTTTCCAATTCATTCCTCATGTAGAGTACCAGAGGAGCTTCAACTCCTCATAACATCACCTTCAACTCCTCATAAAAGATCATCTTCATATTGCAACCACGACAACTCGTCACCTTCAAGCACCACCACCGCCGCCTCCAAGTTGTCTTCTTCACTTAGTTTGTGAAAACGAAAATAACGTTGTGCTCGAAGGATCCACCCATTGGGTTTGACCCATCAAAAGTTGGAAGATCCCGCTCCTTATACCACCCGGAGTTGTTATTTGAATAGTTCGAACCAGTTACCCACAAAAACCCACGGGATCTCCATTTCCACCTTCTCCTTGACCCGCATTTCCAGCCCACCATTACTCGCACTACCAATTGATCTATTATTAACATCATCATTTTGCAAATTAAATCCAACTCTACCTTTCCTCCTGGATTCATGCTGGTTTCCGGATTTTCAAAAGGAGTGTTTTGCGCTGCCTAAAGTTGCGAAATGGTGGTTAGCATCTTCAATTGAAACTTGCTATGTTCTTTTCTCAGTATCACCATTGTCGCCTCGTGATTCTCCCGGCTACGGTCAATTCTACCTTCCAACTAGGTGGATAACATAG

mRNA sequence

AAACCGGAAATAATGCCGAACACGGCCTAAGGGATGATAATCCTCTAAAACTTGTAGACAAAAAAAAAATGGCGACCTTTGCAAGACTTCCACTCCTTCAACTACAACCACACCCTAAACTCCTCAAATCTTACTTTCACTCTTCTCGCATCAAATTCAAACTCCCCAATCTCTATTTATCTACCCCTTCTCAAAGCGTCTCGCCATTTCGTTGTTTCTCTTCCAATGTCGATCAAATTCATCAGAATTCTTTCCACAACGAATCAGTTGGGTCCATTGTTGGGGATTTGCTGAATTATCTCAATGAATCTTGGACCCAATTTCATGCTACTGTATCACCATTGTCGCCTCGTGATTCTCCCGGCTACGGTCAATTCTACCTTCCAACTAGGTGGATAACATAG

Coding sequence (CDS)

ATGGCGACCTTTGCAAGACTTCCACTCCTTCAACTACAACCACACCCTAAACTCCTCAAATCTTACTTTCACTCTTCTCGCATCAAATTCAAACTCCCCAATCTCTATTTATCTACCCCTTCTCAAAGCGTCTCGCCATTTCGTTGTTTCTCTTCCAATGTCGATCAAATTCATCAGAATTCTTTCCACAACGAATCAGTTGGGTCCATTGTTGGGGATTTGCTGAATTATCTCAATGAATCTTGGACCCAATTTCATGCTACTGTATCACCATTGTCGCCTCGTGATTCTCCCGGCTACGGTCAATTCTACCTTCCAACTAGGTGGATAACATAG

Protein sequence

MATFARLPLLQLQPHPKLLKSYFHSSRIKFKLPNLYLSTPSQSVSPFRCFSSNVDQIHQNSFHNESVGSIVGDLLNYLNESWTQFHATVSPLSPRDSPGYGQFYLPTRWIT
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo11485.1Spo11485.1mRNA


Homology
[Close]
BLAST of Spo11485.1 vs. NCBI nr
Match: gi|902173368|gb|KNA08254.1| (hypothetical protein SOVF_164090 isoform A [Spinacia oleracea])

HSP 1 Score: 181.8 bits (460), Expect = 6.500e-43
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1 

		  

Query: 1  MATFARLPLLQLQPHPKLLKSYFHSSRIKFKLPNLYLSTPSQSVSPFRCFSSNVDQIHQN 60
          MATFARLPLLQLQPHPKLLKSYFHSSRIKFKLPNLYLSTPSQSVSPFRCFSSNVDQIHQN
Sbjct: 1  MATFARLPLLQLQPHPKLLKSYFHSSRIKFKLPNLYLSTPSQSVSPFRCFSSNVDQIHQN 60

Query: 61 SFHNESVGSIVGDLLNYLNESWTQFHAT 89
          SFHNESVGSIVGDLLNYLNESWTQFHAT
Sbjct: 61 SFHNESVGSIVGDLLNYLNESWTQFHAT 88
[Close]
BLAST of Spo11485.1 vs. NCBI nr
Match: gi|731365764|ref|XP_010694702.1| (PREDICTED: probable aspartyl aminopeptidase isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 99.0 bits (245), Expect = 5.600e-18
Identity = 57/88 (64.77%), Postives = 60/88 (68.18%), Query Frame = 1 

		  

Query: 1  MATFARLPLLQLQPHPKLLKSYFHSSRIKFKLPNLYLSTPSQSVSPFRCFSSNVDQIHQN 60
          M T ARL LLQLQPHPKL K  F S  IKF  P L  +T S   S F   SSN DQIH+ 
Sbjct: 1  MGTVARLQLLQLQPHPKLPKPCFLSPSIKF--PYLSSATRSCRFSVFPSLSSNADQIHET 60

Query: 61 SFHNESVGSIVGDLLNYLNESWTQFHAT 89
          S + ES GSIVGD LNYLNESWTQFHAT
Sbjct: 61 SSNAESSGSIVGDFLNYLNESWTQFHAT 86
[Close]
BLAST of Spo11485.1 vs. NCBI nr
Match: gi|731365762|ref|XP_010694701.1| (PREDICTED: probable aspartyl aminopeptidase isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 99.0 bits (245), Expect = 5.600e-18
Identity = 57/88 (64.77%), Postives = 60/88 (68.18%), Query Frame = 1 

		  

Query: 1  MATFARLPLLQLQPHPKLLKSYFHSSRIKFKLPNLYLSTPSQSVSPFRCFSSNVDQIHQN 60
          M T ARL LLQLQPHPKL K  F S  IKF  P L  +T S   S F   SSN DQIH+ 
Sbjct: 1  MGTVARLQLLQLQPHPKLPKPCFLSPSIKF--PYLSSATRSCRFSVFPSLSSNADQIHET 60

Query: 61 SFHNESVGSIVGDLLNYLNESWTQFHAT 89
          S + ES GSIVGD LNYLNESWTQFHAT
Sbjct: 61 SSNAESSGSIVGDFLNYLNESWTQFHAT 86
[Close]
BLAST of Spo11485.1 vs. NCBI nr
Match: gi|731365766|ref|XP_010694703.1| (PREDICTED: probable aspartyl aminopeptidase isoform X3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 99.0 bits (245), Expect = 5.600e-18
Identity = 57/88 (64.77%), Postives = 60/88 (68.18%), Query Frame = 1 

		  

Query: 1  MATFARLPLLQLQPHPKLLKSYFHSSRIKFKLPNLYLSTPSQSVSPFRCFSSNVDQIHQN 60
          M T ARL LLQLQPHPKL K  F S  IKF  P L  +T S   S F   SSN DQIH+ 
Sbjct: 1  MGTVARLQLLQLQPHPKLPKPCFLSPSIKF--PYLSSATRSCRFSVFPSLSSNADQIHET 60

Query: 61 SFHNESVGSIVGDLLNYLNESWTQFHAT 89
          S + ES GSIVGD LNYLNESWTQFHAT
Sbjct: 61 SSNAESSGSIVGDFLNYLNESWTQFHAT 86
[Close]
BLAST of Spo11485.1 vs. NCBI nr
Match: gi|297810563|ref|XP_002873165.1| (hypothetical protein ARALYDRAFT_487250 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 67.4 bits (163), Expect = 1.800e-8
Identity = 44/88 (50.00%), Postives = 51/88 (57.95%), Query Frame = 1 

		  

Query: 1  MATFARLPLLQLQPHPKLLKSYFHSSRIKFKLPNLYLSTPSQSVSPFRCFSSNVDQIHQN 60
          MA  ARLPL    P  K   S F S  I F  P   L +P +S SP  C SS++      
Sbjct: 1  MAAIARLPLTHSLPS-KFNPSLFLSQSISF--PTYLLRSPFRSFSPILCSSSSLGD--SR 60

Query: 61 SFHNESVGSIVGDLLNYLNESWTQFHAT 89
          S  ++S  SIVGDLL+YLNESWTQFHAT
Sbjct: 61 SLGSDSNASIVGDLLDYLNESWTQFHAT 83
[Close]
BLAST of Spo11485.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QLX2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_164090 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.600e-43
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1 

		  

Query: 1  MATFARLPLLQLQPHPKLLKSYFHSSRIKFKLPNLYLSTPSQSVSPFRCFSSNVDQIHQN 60
          MATFARLPLLQLQPHPKLLKSYFHSSRIKFKLPNLYLSTPSQSVSPFRCFSSNVDQIHQN
Sbjct: 1  MATFARLPLLQLQPHPKLLKSYFHSSRIKFKLPNLYLSTPSQSVSPFRCFSSNVDQIHQN 60

Query: 61 SFHNESVGSIVGDLLNYLNESWTQFHAT 89
          SFHNESVGSIVGDLLNYLNESWTQFHAT
Sbjct: 61 SFHNESVGSIVGDLLNYLNESWTQFHAT 88
[Close]
BLAST of Spo11485.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E4V4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g095070 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.900e-18
Identity = 57/88 (64.77%), Postives = 60/88 (68.18%), Query Frame = 1 

		  

Query: 1  MATFARLPLLQLQPHPKLLKSYFHSSRIKFKLPNLYLSTPSQSVSPFRCFSSNVDQIHQN 60
          M T ARL LLQLQPHPKL K  F S  IKF  P L  +T S   S F   SSN DQIH+ 
Sbjct: 1  MGTVARLQLLQLQPHPKLPKPCFLSPSIKF--PYLSSATRSCRFSVFPSLSSNADQIHET 60

Query: 61 SFHNESVGSIVGDLLNYLNESWTQFHAT 89
          S + ES GSIVGD LNYLNESWTQFHAT
Sbjct: 61 SSNAESSGSIVGDFLNYLNESWTQFHAT 86
[Close]
BLAST of Spo11485.1 vs. UniProtKB/TrEMBL
Match: D7LXM0_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_487250 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.300e-8
Identity = 44/88 (50.00%), Postives = 51/88 (57.95%), Query Frame = 1 

		  

Query: 1  MATFARLPLLQLQPHPKLLKSYFHSSRIKFKLPNLYLSTPSQSVSPFRCFSSNVDQIHQN 60
          MA  ARLPL    P  K   S F S  I F  P   L +P +S SP  C SS++      
Sbjct: 1  MAAIARLPLTHSLPS-KFNPSLFLSQSISF--PTYLLRSPFRSFSPILCSSSSLGD--SR 60

Query: 61 SFHNESVGSIVGDLLNYLNESWTQFHAT 89
          S  ++S  SIVGDLL+YLNESWTQFHAT
Sbjct: 61 SLGSDSNASIVGDLLDYLNESWTQFHAT 83
[Close]
BLAST of Spo11485.1 vs. UniProtKB/TrEMBL
Match: V4L9N0_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10013255mg PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.000e-7
Identity = 45/89 (50.56%), Postives = 50/89 (56.18%), Query Frame = 1 

		  

Query: 1  MATFARLPLLQLQPHPKLLKSYFHSSRIKFKLPNLYLSTPSQ-SVSPFRCFSSNVDQIHQ 60
          MA  ARLPL    P P +L S          LP   LS PS    SPFR FSS    +  
Sbjct: 1  MAAIARLPLTY--PLPTILNSSLF-------LPQS-LSFPSYLHRSPFRSFSSVSPILCS 60

Query: 61 NSFHNESVGSIVGDLLNYLNESWTQFHAT 89
          +  H +S  SIVGDLL+YLNESWTQFHAT
Sbjct: 61 SHSHGDSNASIVGDLLDYLNESWTQFHAT 79
[Close]
BLAST of Spo11485.1 vs. UniProtKB/TrEMBL
Match: A0A087G4W1_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G041200 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.600e-6
Identity = 44/91 (48.35%), Postives = 51/91 (56.04%), Query Frame = 1 

		  

Query: 1  MATFARLPLLQLQPH---PKLLKSYFHSSRIKFKLPNLYLSTPSQSVSPFRCFSSNVDQI 60
          MAT ARLPL    P    PK L   F S R +F+           +VSP  C SS+  Q 
Sbjct: 1  MATLARLPLTHSFPTFFLPKALS--FPSYRSRFR--------SFSTVSPILCSSSS--QG 60

Query: 61 HQNSFHNESVGSIVGDLLNYLNESWTQFHAT 89
             S  ++S  SIVGDLL+YLNESWTQFHAT
Sbjct: 61 DSKSLGSDSNASIVGDLLDYLNESWTQFHAT 79
[Close]
BLAST of Spo11485.1 vs. TAIR (Arabidopsis)
Match: AT5G04710.1 (Zn-dependent exopeptidases superfamily protein)

HSP 1 Score: 51.6 bits (122), Expect = 3.600e-7
Identity = 39/91 (42.86%), Postives = 45/91 (49.45%), Query Frame = 1 

		  

Query: 1  MATFARLPLLQLQPHPKLLKSYFHSSRIKFKLPNLYLSTPSQS---VSPFRCFSSNVDQI 60
          MA  ARLPL    P      S+   S      P     +P +S   VSP  C S      
Sbjct: 1  MAAIARLPLTHSLPSIFNPSSFLSQS---LSFPTYLHRSPFRSFSSVSPILCTSHR---- 60

Query: 61 HQNSFHNESVGSIVGDLLNYLNESWTQFHAT 89
             S  ++S  SIVGDLL+YLNESWTQFHAT
Sbjct: 61 DSRSPGSDSNASIVGDLLDYLNESWTQFHAT 84
The following BLAST results are available for this feature:
BLAST of Spo11485.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902173368|gb|KNA08254.1|6.5e-43100.hypothetical protein SOVF_1640... [more]
gi|731365764|ref|XP_010694702.1|5.6e-1864.7PREDICTED: probable aspartyl a... [more]
gi|731365762|ref|XP_010694701.1|5.6e-1864.7PREDICTED: probable aspartyl a... [more]
gi|731365766|ref|XP_010694703.1|5.6e-1864.7PREDICTED: probable aspartyl a... [more]
gi|297810563|ref|XP_002873165.1|1.8e-850.0hypothetical protein ARALYDRAF... [more]
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BLAST of Spo11485.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QLX2_SPIOL4.6e-43100.Uncharacterized protein OS=Spi... [more]
A0A0J8E4V4_BETVU3.9e-1864.7Uncharacterized protein OS=Bet... [more]
D7LXM0_ARALL1.3e-850.0Putative uncharacterized prote... [more]
V4L9N0_EUTSA9.0e-750.5Uncharacterized protein OS=Eut... [more]
A0A087G4W1_ARAAL2.6e-648.3Uncharacterized protein OS=Ara... [more]
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BLAST of Spo11485.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo11485.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G04710.13.6e-742.8Zn-dependent exopeptidases sup... [more]
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0015994 chlorophyll metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0016126 sterol biosynthetic process
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0010007 magnesium chelatase complex
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016851 magnesium chelatase activity
molecular_function GO:0046422 violaxanthin de-epoxidase activity
RNA-Seq Expression