Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCAATTTCTCTTGAGTTTCGCGCCTTATGTCTACGACCCTTCTTCTCTCTGGCAAATTGGCAATGGCAACAAAAAGCAATGGGGAAACATGACAAACGGCTAGATGGGGTCCATTTCCCAATTCTCTCTCCTCAATCACCCAATATCATGTCCTCCACTTGCCCATTTCAAACAAATATTTTCCGCTAATTCTTCCAATTTCAGCTATCAGTGTGCAATGTCTGAACCCTTTTTCCAATTTTAGGTTTTTGGTACACTTGGGAGTGAACAACTAATTAGGGTTTTCTTTTAAATTTACTTCCTCTGTTTAAAGAAAACCCATTTCAGCATTTTAGACTAAATAAATGATGTTTAAAGTGTTTTTCTCCTTCAAATTGATATTTTTCTGTGGATTACTGCTTGTTGCTGAAGTTTGCTCCAAGAAACCTCATGGTAACTATACTCTTCTTACTTAATCTTTCAATTTGTACTCTTTTGAATTATTCTTCTTTCTGGGTGGTTTTTTTATATTCTAATTGTAATTTTATTCATCAAAATTGGAACTTGGGTTATATAGTTTGTTAAATTGATTACGGACATGAACCTTAAGTTAACTAAAATGTTCAGCTCTGTTGTGCTAATAATTATGTCTACAATTTCTAATCTCTTTGTGAGTTTCAATTAGCACTTTGTAACTCGAAGGCTATCCTGTTTCGTGCAATATCTGTGCTCTACTTTTGTTGGGGCCACTAACAAGTGAGGTATGTGGAGGATTTCTAAACCTCAAGTGGCTTGTGTCGGACACAAGTGAGTACCAATATAGAAAATTTATTACCAATACTAAGATTTTAGTACCAATAACACAAAATTGCTTAGAAGTATCAATACAAGTCATTTTGTGTTATTGGTACTAAAATACGATAGTATTGGAACTAAATTTTGTGTATTGGTACTCACTTGTGTTCATATGACCAAGACTTCCTCGAGGTCTGTGTGACTCGGATTGGGGTCTTGCTTGCCTCAAGTGCTAAAATGAGCTTTCTTTGTTTTGAGGAAATTTTGTTAAGTAAGCTCATGGAACTAAAAATTCCCTTCAGCCTAATCTGGTCTATGGGCATTGAGTCATTCACCAATCTATCTGTTGACATCGCATATCCTCTAATTGAAGGGTACGGAGTACATATAAGCCTATTAGCCCTTTTAAGAACATAATTTATAAATTCAGTTTGAAGTTCCAAACTTGATGTATCAGCTTTCTTGCAGAAACTTGAATTGTCAACTTGGAAGTTGGGACTTTGCTTATGCGCCAATAGAAATAAGTGGACATTGGTATGGAGTATATACTATATAGTGTGAGTAGCTGACAGAGTAATAAGTATGTTCTGCATAGGAATTAGAAACAAAGCAGAGAAATTGAAACCTATGATAAGAAATGTGAATTAGAAGACTTGTTTTGGCTGCTTTTTGCAATGTGAAGGACAGTCACCTGTGATAATGTAAATCCATCACTAGTTAAACGTGTATTGTAATGCAAGACCTTATTGCAATCGTGTCTTCAGAACTTATACGAGGTAGTTTGTCGTCCCATAAAAGCTATCGTGTTTGATATCCATCCACCCTTTTGTTTTTATGTCTGGAAATGTTGGTGACAGGTAATCCAGCAAAAGAAATAGTTGACATGATCAACAAAAACCGTACTGCCATAAAACTCCCTCCACTGTATGATAGTGGTGGGCTGGGGTGCATGGCCTTGCAGTACGCGGAGGAGTGTAAGGGAAACTGTACGAGCAGCAATACTGTGAGCTGTCGACCCTTGGAAGACGAATTCACACAAGTCTATGCTCCTGATTGTGGCGTGGAACTCTCTACTTTTGGCATTTTATCCGGTAAACTTGTGGGATGCTGGTCCAACTACCTTCCAGCATCAGAAGCCTTCTCACAGGTTCTTGTTCGGGACAAAAAGTCGTTATCTTTCCTCACTAACAGAACACACACCGAGGTGGGAGTAGGCGTGGCTTCAACTCATAAGGGCCATTTATTCTGGTGTGTATTATTCAGTAGTGGGCAGACTAATTCAAGTTTCATTCTTGATAACTTTGGACAAGGAATTAAACAAAAGCAAGGGTGCTTTAGTGGAACCAATACAACTTGCAATCAAGCAACTAGTATCAAAGGTGGCATCTTTTTTAGCAATTTGTCTGCTATTTTCACCTCAATATTCCTGCATTTCATCTCTACAAATCTTGATACTTTGTTTCATCTTTGAGGATCAGATCTACCCCAATTAACGAAACAGTTTCTTGTACTTGAAAGCAATTTATATTTTTTGGAAAATTGTTCATGAAAGGATTGAATTTTCTTTTATAAGGTAGATCCAAATGGGACTTGGAGTCTTGGACTAAGACGCAAAATCGCAAATGTGCAAGGATATTTAGCTTTTGGTTACGGAGGATGGTGGTATAGCAGGCAGCAATCCACCTTTCATAGTTCGGGACAATAAAAAGCCAGTCACCGAGGGTGGCTACTTGCTTTCGTGCTCTATGCATGGACCATAAATCACGGGCCGGGCTTCGGGCCTAGACCAATGCTCATGCAAAGCCCATTCTGCATCGTGACAGGTCTGGCCTTCGTGCCTTAGCCTAATTTTACTAACGTGTTTTGTCGTGTAGGGCCGAGTAGTGTCGTGCCTTGTCGTGCTTTTTCCAAAAGAAAATGCGGCCTATAGCCTACGATTTCATGCTCGTGTCGGGCCGTGCCTTTTTCGTGCACAGGCCGGGTCGGGTTTGTTTCTCTTATCTAACAAATTTTGTTTTAGAAAAGTAAAGTAACATTTACTAACTTTATCTATCTTGATCAGATAAATAAATAAATGATTGAGGCTAGTACTTTTTTTGTTTTTGGTGTAGAAAGAGGCACAAATTGTTAGGCAATAACTGGTGTAGGTGGGATTCGATCTCATATCTTGGATACCACACCCTCAAGACTAGAAAGGCTCCCGTAAGAACACTTTTTCTTCGTAAAATATTTCTCTCAGTAAGAACACTCTTTGAATCGTTGGATTCTAATCTAATCGCTCATATTTAACGACTACTAATGGCATTTTGGGTGTTGGAGATAAACCCCTCTTCTTCTTATCTCCCATCATTTACTTTCTCTCTCTAAATTTTTTTCGCTGCTTTTCTCTTTCTCTCTTCTCCTTCTTCTCGCGCAATCATCGCAATTTTTATTCACAATCATCACAATCGTCCACATTCATCGCAATTTTTATTCAATTTTTCATCAAATTTGGTCGATTTTTCTACGTTTACTTTGATTATCGAATTGCGATTTCAATTTATTCGAGTTTTCTCAATTCATTAACTATCTTCATCAAAAAAAATTCCAAAATTTTCAGCAGTTTTCGAAGGTATGTGATGCAAAATTTGAATTTTATCTATTATTTTCCTTGTTTTAATTCTTCTATTTAGCTGAATTCTTAGTTTGATTTTTTTATTCGAATCATAATTTGTTGATTTTTATATTGATTATGGACTTTTAATAATTTGATTTTCATTCGATTTTTTTTTTGCTTTTTAATGATTTTAGATTGATTCTATTTGATTTTCTGTTTGTTGTTTGTCATTGTTTTAAATTTAATCTATTATAATTGTTAATTCTTATGTTTCAGGTTAATTCTACTCTGTTTTAATTGATTATGGCTGCTGAAGTTGATCATGGTCAGAGTTTATTCAGTAGTTACTGAATCAGGCAATTGTTTTTTAATTATTTCACGCCCCTGTACTTGATGATGTTCTAAAGTTTTAATTCTCAAGTTCCTATGTTTTGCACATGTTATGCACTTGTCTGTACTTTTATTTTATGTTCTGATGTTTTTATTCTCATGTTCTAAATATGTGTTCCTATGTTCTACACATTTTATGCACTTATCTGAACTTTTATTCACGTTCTTAAATTTTTATTTTCATGTTTTAAATATTTGTTACTACGTTCTGCATATTTTATGTACTTGTCTAAACTTTTATTCCATGCTCTGTTGCAGTTGGAATTGTGAATAATGAACCATCTAGTTCTTCTTCTGTTGGTACTCCTGGAGTTGGAGTTGCATTCAGTCCTGGTGGTACTAGAGAATGGATTCCTTCTTGTTCCAAGGAGCTAAAACCTATTGTTGGAATGAAATTTAAAGATCATGGGGGAAGGTGTATCATTTTATATAGCTTATTCAACTGCTTCTGGTTTCACTGCTAGAAAACCTACTACTACACTAAGGAAGAAGACTGGAGTAGTTGCGTTTCAGTATTTTGTATGCAATAAAGAAGGTTTTAGTGCCGTCTCGTAAGCCTATTGTGGAAGTAGTTGAAGAAAAGTAAGATAATTTCTAGCTAATTGCAGCAACCTCAAAAGGTGAAGGTTGAGAATATGCTGAATTGCAACAATCAATAAGGGCGGAAGTTACAATTAATTCGCTTAATTGCAACTTGTACTGTATGTGCGCCCTGCGAACTCCTATTTTTAAAAAATTAGCTTTTTCACAACGCTTGTTCAATAAAATCGCTGCGAGTAGATCATTTAAATATTGACCCGCCTTGACCAAACCCCTGTTGCAGCGCGTATGATTTGCATGAGTTACAATTGATGAGTTCCAAAATATTTTTAAAACTTGTGTCAAAGTAAAAAGTCACATAAATATTTTTATAAATATAGTATAAAAATACATATTTTTTCAAAACATCCCACCCAAAACCCAGTAATACTAATATTTTACCCCATGTTCTCTTCCTTGTCCTTCTATTTTGCATCCCCAACTCTTGCTACTTTATCCTTAACCTTCTGTTTCGAAGGTGCTGCATGTTCTGAATTCTCTTTTTGACTTTCCATCAATGTAGTTTTCTTTTGTAAAGTGCAATTAATATATGAATAGTTTGTTTGTTTGTTTTGTTTAATCTTTCAATAATAAGAAACATAAAATATGTATAAAAAACAAAGGGAAATTTTCTATGGTAGCATTATACTTTTGCAAA GCAATTTCTCTTGAGTTTCGCGCCTTATGTCTACGACCCTTCTTCTCTCTGGCAAATTGGCAATGGCAACAAAAAGCAATGGGGAAACATGACAAACGGCTAGATGGGGTCCATTTCCCAATTCTCTCTCCTCAATCACCCAATATCATGTCCTCCACTTGCCCATTTCAAACAAATATTTTCCGCTAATTCTTCCAATTTCAGCTATCAGTGTGCAATGTCTGAACCCTTTTTCCAATTTTAGGTTTTTGGTACACTTGGGAGTGAACAACTAATTAGGGTTTTCTTTTAAATTTACTTCCTCTGTTTAAAGAAAACCCATTTCAGCATTTTAGACTAAATAAATGATGTTTAAAGTGTTTTTCTCCTTCAAATTGATATTTTTCTGTGGATTACTGCTTGTTGCTGAAGTTTGCTCCAAGAAACCTCATGGTAATCCAGCAAAAGAAATAGTTGACATGATCAACAAAAACCGTACTGCCATAAAACTCCCTCCACTGTATGATAGTGGTGGGCTGGGGTGCATGGCCTTGCAGTACGCGGAGGAGTGTAAGGGAAACTGTACGAGCAGCAATACTGTGAGCTGTCGACCCTTGGAAGACGAATTCACACAAGTCTATGCTCCTGATTGTGGCGTGGAACTCTCTACTTTTGGCATTTTATCCGGTAAACTTGTGGGATGCTGGTCCAACTACCTTCCAGCATCAGAAGCCTTCTCACAGGTTCTTGTTCGGGACAAAAAGTCGTTATCTTTCCTCACTAACAGAACACACACCGAGGTGGGAGTAGGCGTGGCTTCAACTCATAAGGGCCATTTATTCTGGTGTGTATTATTCAGTAGTGGGCAGACTAATTCAAGTTTCATTCTTGATAACTTTGGACAAGGAATTAAACAAAAGCAAGGGTGCTTTAGTGGAACCAATACAACTTGCAATCAAGCAACTAGTATCAAAGGTGGCATCTTTTTTAGCAATTTGTCTGCTATTTTCACCTCAATATTCCTGCATTTCATCTCTACAAATCTTGATACTTTGTTTCATCTTTGAGGATCAGATCTACCCCAATTAACGAAACAGTTTCTTGTACTTGAAAGCAATTTATATTTTTTGGAAAATTGTTCATGAAAGGATTGAATTTTCTTTTATAAGGTAGATCCAAATGGGACTTGGAGTCTTGGACTAAGACGCAAAATCGCAAATGTGCAAGGATATTTAGCTTTTGGTTACGGAGGATGGTGGTATAGCAGGCAGCAATCCACCTTTCATAGTTCGGGACAATAAAAAGCCAGTCACCGAGGGTGGCTACTTGCTTTCGTGCTCTATGCATGGACCATAAATCACGGGCCGGGCTTCGGGCCTAGACCAATGCTCATGCAAAGCCCATTCTGCATCGTGACAGAAAGAGGCACAAATTGTTAGGCAATAACTGGTGTAGGTGGGATTCGATCTCATATCTTGGATACCACACCCTCAAGACTAGAAAGGCTCCCGTAAGAACACTTTTTCTTCGTAAAATATTTCTCTCAGTAAGAACACTCTTTGAATCGTTGGATTCTAATCTAATCGCTCATATTTAACGACTACTAATGGCATTTTGGGTGTTGGAGATAAACCCCTCTTCTTCTTATCTCCCATCATTTACTTTCTCTCTCTAAATTTTTTTCGCTGCTTTTCTCTTTCTCTCTTCTCCTTCTTCTCGCGCAATCATCGCAATTTTTATTCACAATCATCACAATCGTCCACATTCATCGCAATTTTTATTCAATTTTTCATCAAATTTGGTCGATTTTTCTACGTTTACTTTGATTATCGAATTGCGATTTCAATTTATTCGAGTTTTCTCAATTCATTAACTATCTTCATCAAAAAAAATTCCAAAATTTTCAGCAGTTTTCGAAGGTTAATTCTACTCTGTTTTAATTGATTATGGCTGCTGAAGTTGATCATGGTCAGAGTTTATTCAGTAGTTACTGAATCAGTTGGAATTGTGAATAATGAACCATCTAGTTCTTCTTCTGTTGGTACTCCTGGAGTTGGAGTTGCATTCAGTCCTGGTGGTACTAGAGAATGGATTCCTTCTTGTTCCAAGGAGCTAAAACCTATTGTTGGAATGAAATTTAAAGATCATGGGGGAAGGTGTATCATTTTATATAGCTTATTCAACTGCTTCTGGTTTCACTGCTAGAAAACCTACTACTACACTAAGGAAGAAGACTGGAGTAGTTGCGTTTCAGTATTTTGTATGCAATAAAGAAGGTTTTAGTGCCGTCTCGTAAGCCTATTGTGGAAGTAGTTGAAGAAAAGTAAGATAATTTCTAGCTAATTGCAGCAACCTCAAAAGGTGAAGGTTGAGAATATGCTGAATTGCAACAATCAATAAGGGCGGAAGTTACAATTAATTCGCTTAATTGCAACTTGTACTGTATGTGCGCCCTGCGAACTCCTATTTTTAAAAAATTAGCTTTTTCACAACGCTTGTTCAATAAAATCGCTGCGAGTAGATCATTTAAATATTGACCCGCCTTGACCAAACCCCTGTTGCAGCGCGTATGATTTGCATGAGTTACAATTGATGAGTTCCAAAATATTTTTAAAACTTGTGTCAAAGTAAAAAGTCACATAAATATTTTTATAAATATAGTATAAAAATACATATTTTTTCAAAACATCCCACCCAAAACCCAGTAATACTAATATTTTACCCCATGTTCTCTTCCTTGTCCTTCTATTTTGCATCCCCAACTCTTGCTACTTTATCCTTAACCTTCTGTTTCGAAGGTGCTGCATGTTCTGAATTCTCTTTTTGACTTTCCATCAATGTAGTTTTCTTTTGTAAAGTGCAATTAATATATGAATAGTTTGTTTGTTTGTTTTGTTTAATCTTTCAATAATAAGAAACATAAAATATGTATAAAAAACAAAGGGAAATTTTCTATGGTAGCATTATACTTTTGCAAA ATGATGTTTAAAGTGTTTTTCTCCTTCAAATTGATATTTTTCTGTGGATTACTGCTTGTTGCTGAAGTTTGCTCCAAGAAACCTCATGGTAATCCAGCAAAAGAAATAGTTGACATGATCAACAAAAACCGTACTGCCATAAAACTCCCTCCACTGTATGATAGTGGTGGGCTGGGGTGCATGGCCTTGCAGTACGCGGAGGAGTGTAAGGGAAACTGTACGAGCAGCAATACTGTGAGCTGTCGACCCTTGGAAGACGAATTCACACAAGTCTATGCTCCTGATTGTGGCGTGGAACTCTCTACTTTTGGCATTTTATCCGGTAAACTTGTGGGATGCTGGTCCAACTACCTTCCAGCATCAGAAGCCTTCTCACAGGTTCTTGTTCGGGACAAAAAGTCGTTATCTTTCCTCACTAACAGAACACACACCGAGGTGGGAGTAGGCGTGGCTTCAACTCATAAGGGCCATTTATTCTGGTGTGTATTATTCAGTAGTGGGCAGACTAATTCAAGTTTCATTCTTGATAACTTTGGACAAGGAATTAAACAAAAGCAAGGGTGCTTTAGTGGAACCAATACAACTTGCAATCAAGCAACTAGTATCAAAGGTGGCATCTTTTTTAGCAATTTGTCTGCTATTTTCACCTCAATATTCCTGCATTTCATCTCTACAAATCTTGATACTTTGTTTCATCTTTGA MMFKVFFSFKLIFFCGLLLVAEVCSKKPHGNPAKEIVDMINKNRTAIKLPPLYDSGGLGCMALQYAEECKGNCTSSNTVSCRPLEDEFTQVYAPDCGVELSTFGILSGKLVGCWSNYLPASEAFSQVLVRDKKSLSFLTNRTHTEVGVGVASTHKGHLFWCVLFSSGQTNSSFILDNFGQGIKQKQGCFSGTNTTCNQATSIKGGIFFSNLSAIFTSIFLHFISTNLDTLFHL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo11435.1 vs. NCBI nr
Match: gi|902235775|gb|KNA24078.1| (hypothetical protein SOVF_018340 [Spinacia oleracea]) HSP 1 Score: 477.6 bits (1228), Expect = 1.200e-131 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 1
BLAST of Spo11435.1 vs. NCBI nr
Match: gi|731360745|ref|XP_010691985.1| (PREDICTED: uncharacterized protein LOC104905223 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 339.7 bits (870), Expect = 3.900e-90 Identity = 169/233 (72.53%), Postives = 190/233 (81.55%), Query Frame = 1
BLAST of Spo11435.1 vs. NCBI nr
Match: gi|731420573|ref|XP_010661428.1| (PREDICTED: uncharacterized protein LOC100263389 [Vitis vinifera]) HSP 1 Score: 271.2 bits (692), Expect = 1.700e-69 Identity = 132/220 (60.00%), Postives = 168/220 (76.36%), Query Frame = 1
BLAST of Spo11435.1 vs. NCBI nr
Match: gi|297734664|emb|CBI16715.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 269.6 bits (688), Expect = 5.000e-69 Identity = 131/219 (59.82%), Postives = 167/219 (76.26%), Query Frame = 1
BLAST of Spo11435.1 vs. NCBI nr
Match: gi|870847525|gb|KMS99872.1| (hypothetical protein BVRB_1g017240 isoform A [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 261.2 bits (666), Expect = 1.800e-66 Identity = 125/171 (73.10%), Postives = 143/171 (83.63%), Query Frame = 1
BLAST of Spo11435.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RX87_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_018340 PE=4 SV=1) HSP 1 Score: 477.6 bits (1228), Expect = 8.400e-132 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 1
BLAST of Spo11435.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BIN7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g017240 PE=4 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 2.700e-90 Identity = 169/233 (72.53%), Postives = 190/233 (81.55%), Query Frame = 1
BLAST of Spo11435.1 vs. UniProtKB/TrEMBL
Match: D7SM37_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g00880 PE=4 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 3.500e-69 Identity = 131/219 (59.82%), Postives = 167/219 (76.26%), Query Frame = 1
BLAST of Spo11435.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BIG1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g017240 PE=4 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 1.200e-66 Identity = 125/171 (73.10%), Postives = 143/171 (83.63%), Query Frame = 1
BLAST of Spo11435.1 vs. UniProtKB/TrEMBL
Match: W9QRH9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008029 PE=4 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 1.100e-65 Identity = 118/186 (63.44%), Postives = 150/186 (80.65%), Query Frame = 1
BLAST of Spo11435.1 vs. TAIR (Arabidopsis)
Match: AT1G02180.1 (ferredoxin-related) HSP 1 Score: 218.4 bits (555), Expect = 4.700e-57 Identity = 109/205 (53.17%), Postives = 142/205 (69.27%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo11435.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo11435.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo11435.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo11435.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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