Spo11404 (gene) | SpinachBase

Overview


Name	Spo11404
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Protease inhibitor/seed storage/lipid transfer protein family protein
Location	chr6 : 45393175 .. 45405015 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAAAGTCTTATACTTGGCTTTTTTGGTGGCGGTGTTGGTGGTTTCAACACCAGCACTAGCACAAGATGATGGTATTCCGGTACCGGAATGTGTTACCGAGCTCCACCCCTGTGGGCCCTTTATCAACTCGACCACCGCAGAGCCGCCGTTTGAATGCTGCCAGCCTTTGGGAACTGTGATTCAGAATGATCTTTCATGTCTTTGTAGCGTTTTCAGCAACGATGAGCTGATTCAATCTTTGAGTGTTAATGTTTCTGAGGCAATTACCCTTCCAATGCGTTGTAGTATCCCATTTGATTTAGTTGCTGAATGCCAAGGTAACTTATTTCAATAATGATAGAGTATTAAACTAATATTTGGGTTTCAACCATGAGTTTAAACTTTTGATTGAGTTGGTCTCCTGATAGGGTATCAGAGCCAGCGTGACAAAAAGATCACGGGTTCAAATTTCATCCACCCCTCATTTCAAAGTGGATTATTTCGTGCTGGGTATGAGGAGACATATGTTGCATCCACACTTCAAGCCCGAAGGGCTTTCATATGAGAGGGGACGTGATAGAGTATTAAACTAATGTTAGGGATTCAACCATGAGCTTAAGCTTTTGGTTGAGTTGGTCCTCTGATAATTAATTTCCGCTCATTATAATTAATCGTTATGAATTTATCGTAAATTGGTTTACTGATATGCTTACGTCATACCTAAGACTCGGGATCGAATCTCATATGGATTACGTTTCGGGCTTCGTTTTTAATAATGAATACATAATTTATAATTTCATGCAACAACACTTATGGTGCAACTAGAAGCCCCAACAATGTCTCCGGCTGCAGCTCCAATTTCAGGTTCGAGATTCTCAAACCTTTTTTTTGTTGTTTTTCTAAGGCTTTGTTTGGTATAAAGGAATTGGAAGGAAAATAAGAGAAAGGAAAAGAAAAATATGGCTTCTTGTGTTTGATTTTACAAATCATATTTGTATGAGATTTGGTGGGAAATGAAGAAAAATGGAAGAAGAACCAACGTTAATAAATTATTTTTCTTTCTCTTCCCCTCGTTTCTTTCCATCACACCAAACAACAGAAAATAAATTAAGTTTCGTTTTCTTTTTTTCCTTTCTTGTCCCTGACTCCCTTTCCTTCCTTTACTAATATTGTAATAAACAAAGCCGTAAAGAAACAAACAAAGGAAAACTATTTTTTCGTTAAAGTTTTTCCTCTAAAAATTATTTTCTATACAAATTATTTTCCTATAATCATTTTTTTTTATATTTCTGATGAAACAAACGGAGTCTTTCATGAAATACTTTATATAGTTTGAGATAAATTTTTATTCCAATGGGTTACTTTGAAAGTGTATTTTTGTATGGTAGATTCAGGTCTAAGTTCTGGAATTGCTCTCAAAGGAAAAGGTAAGAAAAAGAATGGGGCCAGCAACATTGCATGGACTGGATCAGCTGCTTTGGGCTCATTCTTGCTTTGTGCAACTTTAATGTTATATTGAAAACCTGGTGGGCCTGGGCCTGGGCCTCCCTTTCAAATGTCTTCTTCAATTTTTAATTTATGTCCATCTCTAAAGTTGGGATTTCCGATACTTTAATTTTGGACATCCTCACAATGTACTTTATAGTGATTCATCATTCATTTGAATTTTTTTTATGGAGGGTATTCATTTATTTGATTATGTTAGTGTGATTTAAAACTAATTTAATCATACTCCGTATTAACTATTGATATCAGACTATTGTTTATTTACCCTATTTTTGTAAGGCATTCGCCTTAAGTAATATTATATCCATTTCTATATTACAAAAAAAGTCTCTGACTCAGAAAATTATACTTCTTACATAACTTAAACGTTAATAATTCGCTAGGAAAAATTCGTGTATATAATGTACGGCGGATTACAATTCGTAGGACTTAGCATAAGCTAAACAAAAAAATGTTAATATTGATGATGCTAAAATGTTAACTTTTATGACCTAATGTTTTTCTAACACTGTCTGACATAATACTTACTCATTTCTCTATTATTATACTTCGTATTGTATGTGTTATGTTACCGACTTACCCAGTTACCCATATTCACATAATATGGAAAGGTAATGGGATAAATTCAAAAAGGTGGTGTGAACAAATATGGAAATTTGAAGCATGTCGAGGGGCCATTAATTGGATTATACAAAGAAGACATGATGATACATTGATACCTTTCTACTCATCAAATAATGGTCCACACCAATACACCATGAATGAATTGATATTAATTGTTCCTACTACCCATCTCGTCTTCATTACATATGTAGATGCATGTGTTGGTAAATCAATTGTACTATCTTGTACATACTTGTTACGGAATTAGAATTAGGCTAGAATTCTAATACCAATATCTTAGTGTTAGAGTCTATTTTATATTCCTATTCCTAAGTATAAAAGGTTTTATGCGCACAAGGTGTACAATAAATTTATTGTACAAGATAACTTTTGCCTATTTTTTTATAACTTTAACCTAATTTTGATTAACTTTTATATCAGTGATAAAAAAATTGATAGATAAACATTTTAATGGGTTAAATGATTTATTTTATACATTATTAGTCATTTTGAAGAAATAAGTTTTACTAAAATTTTTAAAAAAATCACTAAAAAATAGATAACTTTTGCATATATAAGCTTAACTTTTAAGCATTTTGAGTTAACTTTTACTCCGGTGTACAATATTTATTGTACACCCCTTGTAAATAAGAATTTGTGTCCTCAGTATTAGTATTTAGGTAAGATTCTAATGCTTATATGTCCCACATAGACTCGCAATAGGTAAGCTTCTACGGTTCGTTTGGTATGAGAGGGGGATATGGATGAGGATATAAATTGGGATAGGAATAGGGAATTTATGATAGAGAATTCATTAATTTTATCTTTATCCCTTGTTTGGCAGGGTTGAGGATAAGGATATAGATTAAATAATAAATTTACTGTATTACCCTTTTAAAATGGTAGGCTAAAATCATATCAACCTCCTTTCTTTACATATTACCCCTTTTAATGAAGGGTAAAATAGTCTTTTAACATTAAAAGAAGAAATAATCCTAGTAAACAAACAAGGGATAAGGGGTGAGGATAAGGATGGGGATAAGAGTACTTCGTATAAAGGGTTAAAATATCCTTATCCTCACCCCTTATCCCTAATACCAAATGAGCCGTGAATGCTTATAGTTCTTGGAAATAGCTTACCTTCTAGGAAGGGCCTCTCTACCAACAAACAAACAAAAAAAAAAACTTACTCCCTCTTTCCCTTAATACTCGCACTGTTTTGACATTTTGTACTATTCACATAATTCACTTTGACCCTATTTTATTTCTAGTATATGAAAATAAATGTTACTTTATAATATATTGTTGGCTTCATCTTAATACATATTTTCAAAATATTAATATTTTTCTAAATTTTTATAATATGTAGTTAAAGATATTGGTGGTCAAAGATGTGTATTGGCAAGCGTGTCCAGTCGAAACGGTGCGAGTATTAAGGGACGGAGGGAGTACAAGTTACAACCAAATTAAACTACTAGTTTAAATTAAACTCATTGAACATCTATGATAATCTATATAGGAATAGAAATATAAGAACTCTAAGACTAAGATGTTGGTATTAGAATTCTAGCCTAATTCTAATTCCGTAACAAAATAACAATACCCCATAATCTTTTCGGCCGTAATCTTTTAGTTAAGTCTTTTGGGTTTTGTCTAGATCACAAATTCAAGTTAATTTGCCCGTGAGGTTTACCAACTTTTGTGATTGACAAAAATAAAATAAAAAAGATGTCGATCAAGTTTTGTAGTATTTGCGAATCAGTGTTCAGTTGTTCACACTTTTCAAATATGGAGTACGCATGAAATATGTACTTTGACAACCCCCCCCCCCCNTAATAGCTAAATGCAGCCTAAAGTCCTAAACAAACGGAACTTTAACTGATCGAGTAGATTTCGAACGGTTTATGAACAGTGTAAGTATCCGTTCTATTGAATTTATTTTGACTAAACTTATATTATAGAACTTATTTGAATTAACTGAATTTATCTGAACTTATTTTATCTGAAACAAACTTATTTTGTCTGAAATAAACTTAATTGTGTGTGAAAATGTCTGAAAAAAAAACTTATTTTTGTTAAATTTATATTATCTGATCCAATTTATCTACACTTATCTGAAGTCATCTGAACTTATTTTATCTAAAATAGTCAAATAAGTCGAACATAGCAAAGACTAATTCATTTCTACCTCCAACTTGGTCTTCCGTTTCACTTCTCTTCCTTTCTTTTCCCTTTTCTTTTCTCTCCTTTACTAACATTGAACCAAATCGAGCGTAATAATTATTGACTCGGTCTTAAACCTAATAAGATAAAGCGAAAATCCTTTTAAATAAAAGATTATAAAACCTAAAGTAAAGTAGTAACCCCCCGTAAATAACAAAGCCCGTTCAGTCGTTCACTTGCAGACTTTGCACTACACTCGTTGGAGAGAGAGAAAAAAGAAAGAATTACGGAGTAATTCATTTCAAGCCTTCTAGAATGGATAAATCAACCATGGTGGTTTTACTGGCGGCGTTAGTAGCCTGTATGGCGGCGTCAACGGCGGCACAAAGCCCAGCAGGAGTACCCACATGTGCATCGAAGCTAGCGGCGTGTTTCAGCTACTTAAACGCCACCACAACGCCACCGACTAGCTGCTGTGGTCCGCTGAAAGGGGTGGTGACAAATGAAAAACCATGCCTTTGCAGCATTTACGGCAACCCTGCTTTGATTCAGGCTTTTCATATAAATGTGACTCAAGCCCTCAATCTCATCCCCCTTTGTCATGTCGACACTGTTAAAGATCCCTCCAATTTGTGCAAAGGTATTCTCCTTTTTTTTTTTCCTAATCAATTTTTTTTATTTTCTGGGTTATTATTTCTTGATTGCATTTGATAATTCAAGTAGCAGTATGAATGTGTAAAACGAAATTCCCTTTGCAGAATTAATTTTGATTTTATAATTATCTTTTGCTAGCTGAAATGAATATTATTTCTTGATTTGCATTTGATAATTCAAGTAGTACGGAATAGTATTGTTCAATTACTTTAAAAAAAAAACTAAATTTGGACTCAATTTTGCTTTTGTTTTTTATTTTTATAAAGTATAAATTAATGTTTGATACACATAAATCTGAACTTCTATAAAATTTTACCCTGTTGTTCAGATGTAGCACAATCTCCATCTTCATCTTCATCTTCTTCAGCTTCCACTGGATCAACTCCAGCTACTCCAGGTAATAATAAAGTTTCCATTTCTGCCCCCTTTCAATTTCGAATGTTATTGTGCAACTTAACTAATTGCATAATTAAATGCTTTTTGCATTAACAGCTTAATACTATGTCCAATTTGGGGTACAAAATTAACAACTTTTTGCATTACATGGATGGTTTTTGCTGGTTGTTGTGATTTTGTGAATCGGGTTGATTGAGTTACTATCATGAATCATGATTGTACTTAATAAAGTGATTTGTTTTTGGATTTTGTTTTCCGGACTCTCCATATGGAAATATCTCGATTATAGACTTAGAGTATATTAATTGATTGATACAATCAATCAGAATAATTTAGTTTAGTATGAATTTTATTCTAATGTAATTACTACCATATATAGTTAGTTATAATCTTCTTATTTATGTTCATTTTTGACTTTGTAATATTCTGAATGTAGTATAAATACTCCTTTGTAAACAACAATATAATCAAGCTTTCTCATAACCCTATCAGAAAAAGATTTTTTTTTGAAATGGTAAAAAAATTTGATTGAAAACTAAACCTTTGTACAATTTTTCTAACCTACCATACAAACTTGTGATTTTTTTATTTCTGGCCTCTTAACTTCTATATTAAGCAACTTAGCTACTTCCATTTTAATGCGGAAATCAGCTATGCTTTTAGCATATGTGGTTGAAGATTGTTGAGCTACTTCTTCACAGTAGTATACAAGTTTGCTGTCCGTCTATCACAATGTACCTATTTATGATACTAGTTAATGTGCCGTGAAGCAAGGATAAGGATACTGAATTAGTGTTGGCTTGACTCTTAGAAGTCTTCCACTTTTTTCTTCTTCTAATCTTCCAAATCTTTGATTGGCTCGTAGCGTATGGCACTGATGATTCAGTTGACTGAGGAGACTGGGGTAGAATAATTGGTGGATATTACTTCTGCTATATTATGACTTTCAAGAGTGAACATATCTTCCCTATAGATGTCTTTCTTGGTAAAACAGCTTATTGTGATGGGACTAACAACTCGTTTGGTAGTCGGTCATAAATGGTGTCAATAGGAATGAATTTATATGTAAATTTATAAGGAAAATCAATATCTATTCCCATGGTAATGTTAGTTCACTCAAAATTATCTATTTTTCTTTATTACCATTCATTACCATTTGGGGAGTGGTATTAGGTGATACTGCAAATTTATGAAGAAAAACACCAAGTTAGAGACAAAATTTCATTACCATGGATATCGTTATGTTATTTTCTTGCTAAATAACACTTAGATTCATTCTCAGTCCCACCATTTATTACCAGCTACCAAACGGGCCGTAAGTGGACTTTGATTATACTTCTACGAGCCCAGCCCTTTCGCCCGCAAATCACCAATATTCTTTTTCGCCCACCCTTTTTCCTGCCATCCATAAACTTGGCATCAGCATTTCTAGTAGTAGAGGCCATAAATTGGGATTGACCTTATTTCCCTCGTTTACACCATGCATTCAAACTTCTTGTATGAGACAGAACACTATCAGGCTCAATAGGAATTTGCAAAGAAAGAACAACAATAGTCCGAGGAATGTCTACAAAGAACAACAATGAACAGGCCTTTTACATGTAAAATTGCTCTGAAAAATCTGTTCCAAAGAATATTATGAGCTGAAATGGTGATTTCTTTTCCAATTGGTCATGACAAACCACTACCGTTTTGTTGCAAGTTTTGTTAATAGGAAAGGTTATCGCGCTCATTGTCTTGTGTACTTTACCGAAACTATGTCATCAAATTTCCATGAAACCAATGTGATATGGATGTACTGAACTAAGCTCTATAAGTATCCGATTAATCTTTGCAGGGAACGCGTCTAGAAGCAGTCCTCCCCGCAATGCTGCTGTCAAGATTACTGGAGCTGGTTCTGCTGGAATTGTTTCCATTCTACTTATGTTTGGGGCATATACAATGTTCTACTAGATGTTGTTCTGTTCTCTTTTATATCTCAAATTAGTATATGTAATTTAAAGATTATTCTATGATGATATTAATCACCAATATATATATATATATATATATATATATATATATATATATATATTGAGGCAGACATCAGATAAGGCCATTTCAGTCGAATATTTCTTCAGAATCTAACATCTAGAATCGGTTTTGTTAATCGTATCACTAACCCTGATGAAACCTGTTGGGGTTTTGTACTTTTGTTTAGTATGTTCTTCCTCGTTGATGTTCGCTGTCTGTTATCCATGACAATCTTCTATATACAAACAGTTGAACGTTCATGATTATTGGGGATACGACTAATTTTAAGTTCACGATCCCCTTAAATTGGATTGTAAACGAATAACTATCTACAATAAAGGTAAAAGTTGAAAATCGACAATGATATGAAACCAATAGTAAACTGGTCGATTTATTGTTTTTTTCTCTTATAACTAAAGATGGTTGTGGGCCGGGTCGGTCTCAGCCCGACACTATCCAACCTGACACGAAAAAAAAAGCCAGGCCCTGCATATGCACGACAATAGCACGGCCCGACATGAAGTCGTGGGCCGGTTGTTTTTTTTGGGAAAAGGACGACAAGACACGACACGACAAAGCATGCTAAGTTTAATAAAATTAGGCTTAGGCACGACGGCCCGTGAGTCTGGGCCCTATTTTAAAAATTTCGGCCATATCCGACACGAAAATTATTTGGCTCTGCATAGGCGCGAAAAAAGCACGGCCCAACACTAAGTCGTGGGTGTTGGGCCGGACGTGGACCACTTTTTTGGGAAAGCACGATAAGACACCGCACGTAAAGTACGCGAATTTTAATAAAATTAGACTTAGGCGCGACGGCCCATGTGTCTGGAATCTATTTTAAAATTTCCGGCCCGACCCTGCCCGGATGGGCTTTGCATGGCCCGGAGCCCGGCCGTCTTTACACATAACTGGCCGACCATTAGTTGGTTGCTTTATGTGAAAAGTCGTCTAAAAAGACTAAAACATTCTTAAGTAACCGAAAACTAAGTAGGAGTGATTAAATATTTGCCGTCAAGATCAGATATTTTTTTCCTCATTTTCTCTTCTAGTCTTCCTCAAGCCCGCGTAAGAGAAAGACCACCGGGTCAAAACCGGGCCCCACTTTCACCTGCCTCTTCGATTTCCAAACCCATAAAAACGACGATCAAATTCTTCAAATCATCCCCCCAACAAATTCTAATTTCTAAATTTCTAACAAACTTTTTAAAGATGAGTAAATATCTGGCGGTTGTTTTGGCGGTGGCGGTGGCGGTGGTGATACTAGCAACGCCGTTAGCAGTGGCGCAAGAAACACCATCATGCGCGTCGAGGCTAACTGGTTGCCTGAACTACATGAACGCCACCACAACGCCGCCGAGTAGCTGTTGTAATCCACTGAAAGAAGCGGTGATGAATGAAAAAGCATGTCTTTGTAGCATATACGGAAATCCTGCTTTAATTCAAGCTTTTCATATAAATGTCACTCAAGCTCTCAATCTCCCCAAGCTTTGTCATATTGATACTGGAAAATCTCCCAACATTTGCACAGGTTATTATTTTTGTACTCGTAATTATTTCTAACAACTTCATTTTTTTTTACTTATCTATAAAAAAAATTATTAGTAAGATATTTTTGCTAAGAATTTTGTTTAATATTTTAATTCAGCGAAAAATGGGTTTTATTTCTTTTATTTTGAATCGACAATTCAATTAAGGACATAGAAAACTTGGCTAAAAGGAAAGAACTTTCCTTCATTTGCATTTTGATGATTCAATTAGTATTAAGAACTTACATATAGAAATTTCAACAAGTTGACTACCACAAAGTGGCCAAGTTCTAAATTTGGGCAATTCAATCCATTGTCGTATGACTATTCATTAATAAAGTTGTTTATTTCTCGAAAAAGGAACCTCACCTCTAAATTACTACAATGTGTTACATTTTCAAATAAACAATGAATTTTGCTTTCTGAAATACTTCCTCCGTCTTTTAATACTCGCAACGTTTGGACTTTTGCCACTATTCATATAATATACTTTGACTATTCGTAGTGTTTTTTATATAAGATAAAACATAGTCATGTGAATCTTGTTAAATTCGTCTCAATGTGTATTTTCAAAATATCAACTTTTTATAATTTTTGCATAAAGAGAATTTAAGATATAAATGATCAAAGTTGTGCATCGGCATGCGTGAAACTAACAAACATTGCGAGTATTAAAAGACGGAGGAAGTATATTTTTGGTATAATATTTTAGATCTGTATGTGTAACTAATTTTCTCTGTTTTAGGTGTGGCGACTTCCCCATCTTCAACATCAACTCCTTCAAGTAATTCCCTTCTTTGCCCTTTGGTTTTATTTCCTTCAAATTTTAAATGATTGATTTTCTATGTTAGTCTTCTGACTTTGTAAGTTGAGATGAAATTGTTAGCTTCACTGAATTTCCAAATGGGTTAATGATATTTGTTTTAGTAAAAATATGTGTATTTAATTATTTTACTTTGGATAAATTGTTTGGAACTGAGGTTAGTGTAGTTCGAGACCAGGGTGTATTTTCATTGTATTCTTTGTTCTCATATCCTTAATCCTTCTGACTTAGTCATTGAGTCATTATAATTCATCTGTAAGAATGATTAAGGTTGCTTGTTTTCGTTCCTTATCAAAACACAAATAAATGAAATATGGATGGTAGTTGTTGTGGATATGTGGAAGGATATGCTTGTGATTGTTGAGGTTTGTAGTGACTCAAGTTGCTTCTATTCCACACTTTTACCTTGGTACTTGAAATCTTTAGCCACTTCCATTTGTTCTGCTGAAAACCTGCCATGCATTTTGTAAGTATTGTTGAGCTGTTTCTTAATTCTTAGGAGTTATGGACAAGATTTTATGATGCAAATTGATGTGCCATTAGTATTAGGTTTGAATTATTGTGTGATAATCCAAATCCCAACTCTTTGGAAATAACCATCATATATTGGTATAACCAATCAATAAATTCTCATACAAGCACAACAGCAGCTTCAGAGAATGTGTTAAATTAGAGCTGATCATGGGCAGGACGGCCCGCTAAGCCCGGCCCATTTAAATAACGGGTTTGGACAACGATTTTGGAAAATATTGAAAAATTAAATTAGCCTGTAATTGTAATGTAATACTCAGTAAACTCTTAGGCAATTTGGCTCTCCCCTCCCTCGATTTATTAGAAAGGGTAGAGTTGATCAACATCATCCCGGGCCGACCCGAAAGTTAGCGGGTTTGGACAGAATATTTAGGCTATGTTTTTGGGCCCGGCCCGAATTTAAAAAAATGACGGGTTTTGGGCAACGTAAAACTACACTCTTAGTTATGAATTTGGCCCGGCCCAACATGACCTGAAATAGCGGGTTTGGGGAACACAAAATCGGCCCGGCCTGTCTTTTGATCGGGTCTAAGAAAGGGGAACGTCCAAAAGGATCAAGAACTGAAGTGATTACTCTCGCTAGCTGTCTGATATAAACTGTGACTTGGGCAAATCGCCAATATTTTGCATTTTTATGGATGTTGGACATGTTTGTTTTTCATACATTGATCCGTTGATCTGAAACACTGATCAACTTCTGCCTATATTCTTACCACAAATTTTCTTGCAATATTCTGTCTTCGAACATTCTGTTTATATTTGTCCAAATAGATGATCGAGGTTGGAACTTGGAAGTGTTTCTTCAGTTAGCTTTGCCTGATATTTCTTCCCTAATCAACAAAGACGAATTGTGTCATTTGATTTACATGAAACCAAGTTATGGTACGGAGTATAAGTTTCCATAATTTGAATGTACTAGAGCTGATCAACATGGCCCAGCCCGACCCGAAAATACCGGGTTTGGGCAGAATATTTTGTCCCGATTGTCGGGCCCGTCCCGATTTTTTTTTTAAAAGCGGGCTTTGGACAACGTAAAACAACATTTTTAGTTATAAATTTGACCCGGTCCGAAAAAACCCGCTATTTTTGTGCCAAAATAGCGGGTTTTGGGCACACAAAATTGACCCGAAGCTTGGACTGGTCCGACATAATAGGTAGTTTTATTGCGCGACCCGGCCCGGCCCGCCTTTTTTATCAGGTCTAGAATGTACTGAGTTGTGAGTTGTGTATCTTTGCAGGAAGCAGTCCTCCTGGAAATGCTGCAGGCAGGATTACAGGAGCTGGATTAGTTGCCTCCTTACTCATGATGTTTGGAGCATACTCTATGTTTTATTAGATTGTTTTACATGTAATGTTTTATGACATTATATTTAATCAGCATATGTAATGTACAAGTTATTTGATTTTGAACTATGAATTGATGATCATAAATATAGATCTAAACTTCACTTCCATGGAAGCTATTTCAGCATGTCATATCTTAAATGCTAATCTTAGATGATGTTTGGTTGACATGAAAAAACATGGCAAGTATTCGTAAAGTAGAAGATTGTAGTTGTTTGGTTGATAAAAAAAATTGGAAGTCACATTTCCTAGGTAAGTGGAACTTCTCATGTTTAACCAAACGGATGATAATAGG

mRNA sequence

ATGAGCAAAGTCTTATACTTGGCTTTTTTGGTGGCGGTGTTGGTGGTTTCAACACCAGCACTAGCACAAGATGATGGTATTCCGGTACCGGAATGTGTTACCGAGCTCCACCCCTGTGGGCCCTTTATCAACTCGACCACCGCAGAGCCGCCGTTTGAATGCTGCCAGCCTTTGGGAACTGTGATTCAGAATGATCTTTCATGTCTTTGTAGCGTTTTCAGCAACGATGAGCTGATTCAATCTTTGAGTGTTAATGTTTCTGAGGCAATTACCCTTCCAATGCGTTGTAGTATCCCATTTGATTTAGTTGCTGAATGCCAAGGGTATCAGAGCCAGCGTGACAAAAAGATCACGGGTTCAAATTTCATCCACCCCTCATTTCAAAGTGGATTATTTCGTGCTGGACTTTGCACTACACTCGTTGGAGAGAGAGAAAAAAGAAAGAATTACGGAGTAATTCATTTCAAGCCTTCTAGAATGGATAAATCAACCATGGTGGTTTTACTGGCGGCGTTAGTAGCCTGTATGGCGGCGTCAACGGCGGCACAAAGCCCAGCAGGAGTACCCACATGTGCATCGAAGCTAGCGGCGTGTTTCAGCTACTTAAACGCCACCACAACGCCACCGACTAGCTGCTGTGGTCCGCTGAAAGGGGTGGTGACAAATGAAAAACCATGCCTTTGCAGCATTTACGGCAACCCTGCTTTGATTCAGGCTTTTCATATAAATGTGACTCAAGCCCTCAATCTCATCCCCCTTTGTCATGTCGACACTGTTAAAGATCCCTCCAATTTGTGCAAAGATGTAGCACAATCTCCATCTTCATCTTCATCTTCTTCAGCTTCCACTGGATCAACTCCAGCTACTCCAGGGAACGCGTCTAGAAGCAGTCCTCCCCGCAATGCTGCTGTCAAGATTACTGGAGCTGGTTCTGCTGGAATTGTTTCCATTCTACTTATGTTTGGGGCATATACAATATCAGATATTTTTTTCCTCATTTTCTCTTCTAGTCTTCCTCAAGCCCGCGTAAGAGAAAGACCACCGGGTCAAAACCGGGCCCCACTTTCACCTGCCTCTTCGATTTCCAAACCCATAAAAACGACGATCAAATTCTTCAAATCATCCCCCCAACAAATTCTAATTTCTAAATTTCTAACAAACTTTTTAAAGATGAGTAAATATCTGGCGGTTGTTTTGGCGGTGGCGGTGGCGGTGGTGATACTAGCAACGCCGTTAGCAGTGGCGCAAGAAACACCATCATGCGCGTCGAGGCTAACTGGTTGCCTGAACTACATGAACGCCACCACAACGCCGCCGAGTAGCTGTTGTAATCCACTGAAAGAAGCGGTGATGAATGAAAAAGCATGTCTTTGTAGCATATACGGAAATCCTGCTTTAATTCAAGCTTTTCATATAAATGTCACTCAAGCTCTCAATCTCCCCAAGCTTTGTCATATTGATACTGGAAAATCTCCCAACATTTGCACAGGTGTGGCGACTTCCCCATCTTCAACATCAACTCCTTCAAGAAGCAGTCCTCCTGGAAATGCTGCAGGCAGGATTACAGGAGCTGGATTAGTTGCCTCCTTACTCATGATGTTTGGAGCATACTCTATGTTTTATTAGATTGTTTTACATGTAATGTTTTATGACATTATATTTAATCAGCATATGTAATGTACAAGTTATTTGATTTTGAACTATGAATTGATGATCATAAATATAGATCTAAACTTCACTTCCATGGAAGCTATTTCAGCATGTCATATCTTAAATGCTAATCTTAGATGATGTTTGGTTGACATGAAAAAACATGGCAAGTATTCGTAAAGTAGAAGATTGTAGTTGTTTGGTTGATAAAAAAAATTGGAAGTCACATTTCCTAGGTAAGTGGAACTTCTCATGTTTAACCAAACGGATGATAATAGG

Coding sequence (CDS)

ATGAGCAAAGTCTTATACTTGGCTTTTTTGGTGGCGGTGTTGGTGGTTTCAACACCAGCACTAGCACAAGATGATGGTATTCCGGTACCGGAATGTGTTACCGAGCTCCACCCCTGTGGGCCCTTTATCAACTCGACCACCGCAGAGCCGCCGTTTGAATGCTGCCAGCCTTTGGGAACTGTGATTCAGAATGATCTTTCATGTCTTTGTAGCGTTTTCAGCAACGATGAGCTGATTCAATCTTTGAGTGTTAATGTTTCTGAGGCAATTACCCTTCCAATGCGTTGTAGTATCCCATTTGATTTAGTTGCTGAATGCCAAGGGTATCAGAGCCAGCGTGACAAAAAGATCACGGGTTCAAATTTCATCCACCCCTCATTTCAAAGTGGATTATTTCGTGCTGGACTTTGCACTACACTCGTTGGAGAGAGAGAAAAAAGAAAGAATTACGGAGTAATTCATTTCAAGCCTTCTAGAATGGATAAATCAACCATGGTGGTTTTACTGGCGGCGTTAGTAGCCTGTATGGCGGCGTCAACGGCGGCACAAAGCCCAGCAGGAGTACCCACATGTGCATCGAAGCTAGCGGCGTGTTTCAGCTACTTAAACGCCACCACAACGCCACCGACTAGCTGCTGTGGTCCGCTGAAAGGGGTGGTGACAAATGAAAAACCATGCCTTTGCAGCATTTACGGCAACCCTGCTTTGATTCAGGCTTTTCATATAAATGTGACTCAAGCCCTCAATCTCATCCCCCTTTGTCATGTCGACACTGTTAAAGATCCCTCCAATTTGTGCAAAGATGTAGCACAATCTCCATCTTCATCTTCATCTTCTTCAGCTTCCACTGGATCAACTCCAGCTACTCCAGGGAACGCGTCTAGAAGCAGTCCTCCCCGCAATGCTGCTGTCAAGATTACTGGAGCTGGTTCTGCTGGAATTGTTTCCATTCTACTTATGTTTGGGGCATATACAATATCAGATATTTTTTTCCTCATTTTCTCTTCTAGTCTTCCTCAAGCCCGCGTAAGAGAAAGACCACCGGGTCAAAACCGGGCCCCACTTTCACCTGCCTCTTCGATTTCCAAACCCATAAAAACGACGATCAAATTCTTCAAATCATCCCCCCAACAAATTCTAATTTCTAAATTTCTAACAAACTTTTTAAAGATGAGTAAATATCTGGCGGTTGTTTTGGCGGTGGCGGTGGCGGTGGTGATACTAGCAACGCCGTTAGCAGTGGCGCAAGAAACACCATCATGCGCGTCGAGGCTAACTGGTTGCCTGAACTACATGAACGCCACCACAACGCCGCCGAGTAGCTGTTGTAATCCACTGAAAGAAGCGGTGATGAATGAAAAAGCATGTCTTTGTAGCATATACGGAAATCCTGCTTTAATTCAAGCTTTTCATATAAATGTCACTCAAGCTCTCAATCTCCCCAAGCTTTGTCATATTGATACTGGAAAATCTCCCAACATTTGCACAGGTGTGGCGACTTCCCCATCTTCAACATCAACTCCTTCAAGAAGCAGTCCTCCTGGAAATGCTGCAGGCAGGATTACAGGAGCTGGATTAGTTGCCTCCTTACTCATGATGTTTGGAGCATACTCTATGTTTTATTAG

Protein sequence

MSKVLYLAFLVAVLVVSTPALAQDDGIPVPECVTELHPCGPFINSTTAEPPFECCQPLGTVIQNDLSCLCSVFSNDELIQSLSVNVSEAITLPMRCSIPFDLVAECQGYQSQRDKKITGSNFIHPSFQSGLFRAGLCTTLVGEREKRKNYGVIHFKPSRMDKSTMVVLLAALVACMAASTAAQSPAGVPTCASKLAACFSYLNATTTPPTSCCGPLKGVVTNEKPCLCSIYGNPALIQAFHINVTQALNLIPLCHVDTVKDPSNLCKDVAQSPSSSSSSSASTGSTPATPGNASRSSPPRNAAVKITGAGSAGIVSILLMFGAYTISDIFFLIFSSSLPQARVRERPPGQNRAPLSPASSISKPIKTTIKFFKSSPQQILISKFLTNFLKMSKYLAVVLAVAVAVVILATPLAVAQETPSCASRLTGCLNYMNATTTPPSSCCNPLKEAVMNEKACLCSIYGNPALIQAFHINVTQALNLPKLCHIDTGKSPNICTGVATSPSSTSTPSRSSPPGNAAGRITGAGLVASLLMMFGAYSMFY

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo11404.1	Spo11404.1	mRNA

Homology

[Close]

BLAST of Spo11404.1 vs. NCBI nr
Match: gi|902207475|gb|KNA15713.1| (hypothetical protein SOVF_095630 [Spinacia oleracea])

HSP 1 Score: 290.0 bits (741), Expect = 8.300e-75
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1


		  
Query: 391 MSKYLAVVLAVAVAVVILATPLAVAQETPSCASRLTGCLNYMNATTTPPSSCCNPLKEAV 450
           MSKYLAVVLAVAVAVVILATPLAVAQETPSCASRLTGCLNYMNATTTPPSSCCNPLKEAV
Sbjct: 1   MSKYLAVVLAVAVAVVILATPLAVAQETPSCASRLTGCLNYMNATTTPPSSCCNPLKEAV 60

Query: 451 MNEKACLCSIYGNPALIQAFHINVTQALNLPKLCHIDTGKSPNICTGVATSPSSTSTPSR 510
           MNEKACLCSIYGNPALIQAFHINVTQALNLPKLCHIDTGKSPNICTGVATSPSSTSTPSR
Sbjct: 61  MNEKACLCSIYGNPALIQAFHINVTQALNLPKLCHIDTGKSPNICTGVATSPSSTSTPSR 120

Query: 511 SSPPGNAAGRITGAGLVASLLMMFGAYSMFY 542
           SSPPGNAAGRITGAGLVASLLMMFGAYSMFY
Sbjct: 121 SSPPGNAAGRITGAGLVASLLMMFGAYSMFY 151

[Close]

BLAST of Spo11404.1 vs. NCBI nr
Match: gi|902220152|gb|KNA18503.1| (hypothetical protein SOVF_070150 [Spinacia oleracea])

HSP 1 Score: 250.8 bits (639), Expect = 5.600e-63
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 1


		  
Query: 160 MDKSTMVVLLAALVACMAASTAAQSPAGVPTCASKLAACFSYLNATTTPPTSCCGPLKGV 219
           MDKSTMVVLLAALVACMAASTAAQSPAGVPTCASKLAACFSYLNATTTPPTSCCGPLKGV
Sbjct: 1   MDKSTMVVLLAALVACMAASTAAQSPAGVPTCASKLAACFSYLNATTTPPTSCCGPLKGV 60

Query: 220 VTNEKPCLCSIYGNPALIQAFHINVTQALNLIPLCHVDTVKDPSNLCKDVAQSPSSSSSS 279
           VTNEKPCLCSIYGNPALIQAFHINVTQALNLIPLCHVDTVKDPSNLCKDVAQSPSSSSSS
Sbjct: 61  VTNEKPCLCSIYGNPALIQAFHINVTQALNLIPLCHVDTVKDPSNLCKDVAQSPSSSSSS 120

Query: 280 SASTGSTPATP 291
           SASTGSTPATP
Sbjct: 121 SASTGSTPATP 131

[Close]

BLAST of Spo11404.1 vs. NCBI nr
Match: gi|731330573|ref|XP_010676204.1| (PREDICTED: protein YLS3-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 186.4 bits (472), Expect = 1.300e-43
Identity = 109/167 (65.27%), Postives = 122/167 (73.05%), Query Frame = 1


		  
Query: 160 MDKSTMVVLLAALVACMAASTAAQSPAGVPTCASKLAACFSYLNATTTPPTSCCGPLKGV 219
           MDKS + VL+ A   C+ A   AQS  G+P CA+KLA CFSYLN T  P   CC PLK V
Sbjct: 1   MDKSAVGVLMTA---CILACAWAQSQEGIPNCATKLAPCFSYLNGTIKPSIDCCNPLKEV 60

Query: 220 VTNEKPCLCSIYGNPALIQAFHINVTQALNLIPLCHVDTVKDPSNLCKDVAQSPSSSSSS 279
           V  E+PCLCSIY NPALIQ FHINVTQALNLI LCHVD +KDP N+CK  A SP   SSS
Sbjct: 61  VKTERPCLCSIYNNPALIQTFHINVTQALNLITLCHVDGIKDP-NICKATALSP---SSS 120

Query: 280 SASTGSTPATPGNASRSSPPRNAAVKITGAGSAGIVSILLMFGAYTI 327
           SASTGST A  G +S SS P NAA KIT AGSAG+ SIL++FGAYT+
Sbjct: 121 SASTGSTSAPSGTSSGSSTPGNAATKITWAGSAGLASILIVFGAYTM 160

[Close]

BLAST of Spo11404.1 vs. NCBI nr
Match: gi|731330575|ref|XP_010676205.1| (PREDICTED: lipid transfer-like protein VAS [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 167.5 bits (423), Expect = 6.200e-38
Identity = 93/157 (59.24%), Postives = 115/157 (73.25%), Query Frame = 1


		  
Query: 391 MSKYLAVVLAVAVAVVILATPLAVAQ---ETPSCASRLTGCLNYMNATTTPPSSCCNPLK 450
           M   +A +  + V +V L   LA AQ   E PSCAS+LT CL+YMNATTTPPSSCC+PL+
Sbjct: 1   MGSKIAWMKMLTVVLVTLTAALAAAQSSSEPPSCASKLTACLDYMNATTTPPSSCCDPLR 60

Query: 451 EAVMNEKACLCSIYGNPALIQAFHINVTQALNLPKLCHIDTGKSPNICTGVATSPSSTST 510
           EAV NE+ CLCSIY N  LIQAF IN+TQALNLPK+CHI+TG SP+IC G ATSP S+ST
Sbjct: 61  EAVTNERTCLCSIYNNTDLIQAFRINITQALNLPKICHINTGNSPDICKGGATSPPSSST 120

Query: 511 PSRSSPPGN-AAGRITGAGLVASL--LMMFGAYSMFY 542
           PS     G+ A+ +ITGA L   +  L++FG Y++FY
Sbjct: 121 PSGGGTSGSGASAKITGAALAGLVYTLLVFGTYAIFY 157

[Close]

BLAST of Spo11404.1 vs. NCBI nr
Match: gi|731330569|ref|XP_010676202.1| (PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 130.2 bits (326), Expect = 1.100e-26
Identity = 64/107 (59.81%), Postives = 80/107 (74.77%), Query Frame = 1


		  
Query: 1   MSKVLYLAFLVAVLVVSTPALAQDDGIPVPECVTELHPCGPFINSTTAEPPFECCQPLGT 60
           MSKVL LA L+ VL VS+   AQ   + +P+CV+EL PCGPF NSTT  PP +CCQPL  
Sbjct: 1   MSKVLCLAALMVVLAVSS---AQAQNVEMPQCVSELGPCGPFTNSTTVAPPTQCCQPLQN 60

Query: 61  VIQNDLSCLCSVFSNDELIQSLSVNVSEAITLPMRCSIPFDLVAECQ 108
           +IQNDLSCLC+VF+N EL  +L +NV+EA TLP RC++  DL+A CQ
Sbjct: 61  LIQNDLSCLCTVFANVELATTLMINVTEAATLPQRCNLQIDLLARCQ 104

[Close]

BLAST of Spo11404.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R849_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_095630 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 5.800e-75
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1


		  
Query: 391 MSKYLAVVLAVAVAVVILATPLAVAQETPSCASRLTGCLNYMNATTTPPSSCCNPLKEAV 450
           MSKYLAVVLAVAVAVVILATPLAVAQETPSCASRLTGCLNYMNATTTPPSSCCNPLKEAV
Sbjct: 1   MSKYLAVVLAVAVAVVILATPLAVAQETPSCASRLTGCLNYMNATTTPPSSCCNPLKEAV 60

Query: 451 MNEKACLCSIYGNPALIQAFHINVTQALNLPKLCHIDTGKSPNICTGVATSPSSTSTPSR 510
           MNEKACLCSIYGNPALIQAFHINVTQALNLPKLCHIDTGKSPNICTGVATSPSSTSTPSR
Sbjct: 61  MNEKACLCSIYGNPALIQAFHINVTQALNLPKLCHIDTGKSPNICTGVATSPSSTSTPSR 120

Query: 511 SSPPGNAAGRITGAGLVASLLMMFGAYSMFY 542
           SSPPGNAAGRITGAGLVASLLMMFGAYSMFY
Sbjct: 121 SSPPGNAAGRITGAGLVASLLMMFGAYSMFY 151

[Close]

BLAST of Spo11404.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RG87_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_070150 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.900e-63
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 1


		  
Query: 160 MDKSTMVVLLAALVACMAASTAAQSPAGVPTCASKLAACFSYLNATTTPPTSCCGPLKGV 219
           MDKSTMVVLLAALVACMAASTAAQSPAGVPTCASKLAACFSYLNATTTPPTSCCGPLKGV
Sbjct: 1   MDKSTMVVLLAALVACMAASTAAQSPAGVPTCASKLAACFSYLNATTTPPTSCCGPLKGV 60

Query: 220 VTNEKPCLCSIYGNPALIQAFHINVTQALNLIPLCHVDTVKDPSNLCKDVAQSPSSSSSS 279
           VTNEKPCLCSIYGNPALIQAFHINVTQALNLIPLCHVDTVKDPSNLCKDVAQSPSSSSSS
Sbjct: 61  VTNEKPCLCSIYGNPALIQAFHINVTQALNLIPLCHVDTVKDPSNLCKDVAQSPSSSSSS 120

Query: 280 SASTGSTPATP 291
           SASTGSTPATP
Sbjct: 121 SASTGSTPATP 131

[Close]

BLAST of Spo11404.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CFP5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g098190 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 9.000e-44
Identity = 109/167 (65.27%), Postives = 122/167 (73.05%), Query Frame = 1


		  
Query: 160 MDKSTMVVLLAALVACMAASTAAQSPAGVPTCASKLAACFSYLNATTTPPTSCCGPLKGV 219
           MDKS + VL+ A   C+ A   AQS  G+P CA+KLA CFSYLN T  P   CC PLK V
Sbjct: 1   MDKSAVGVLMTA---CILACAWAQSQEGIPNCATKLAPCFSYLNGTIKPSIDCCNPLKEV 60

Query: 220 VTNEKPCLCSIYGNPALIQAFHINVTQALNLIPLCHVDTVKDPSNLCKDVAQSPSSSSSS 279
           V  E+PCLCSIY NPALIQ FHINVTQALNLI LCHVD +KDP N+CK  A SP   SSS
Sbjct: 61  VKTERPCLCSIYNNPALIQTFHINVTQALNLITLCHVDGIKDP-NICKATALSP---SSS 120

Query: 280 SASTGSTPATPGNASRSSPPRNAAVKITGAGSAGIVSILLMFGAYTI 327
           SASTGST A  G +S SS P NAA KIT AGSAG+ SIL++FGAYT+
Sbjct: 121 SASTGSTSAPSGTSSGSSTPGNAATKITWAGSAGLASILIVFGAYTM 160

[Close]

BLAST of Spo11404.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F9N3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g098200 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 4.300e-38
Identity = 93/157 (59.24%), Postives = 115/157 (73.25%), Query Frame = 1


		  
Query: 391 MSKYLAVVLAVAVAVVILATPLAVAQ---ETPSCASRLTGCLNYMNATTTPPSSCCNPLK 450
           M   +A +  + V +V L   LA AQ   E PSCAS+LT CL+YMNATTTPPSSCC+PL+
Sbjct: 1   MGSKIAWMKMLTVVLVTLTAALAAAQSSSEPPSCASKLTACLDYMNATTTPPSSCCDPLR 60

Query: 451 EAVMNEKACLCSIYGNPALIQAFHINVTQALNLPKLCHIDTGKSPNICTGVATSPSSTST 510
           EAV NE+ CLCSIY N  LIQAF IN+TQALNLPK+CHI+TG SP+IC G ATSP S+ST
Sbjct: 61  EAVTNERTCLCSIYNNTDLIQAFRINITQALNLPKICHINTGNSPDICKGGATSPPSSST 120

Query: 511 PSRSSPPGN-AAGRITGAGLVASL--LMMFGAYSMFY 542
           PS     G+ A+ +ITGA L   +  L++FG Y++FY
Sbjct: 121 PSGGGTSGSGASAKITGAALAGLVYTLLVFGTYAIFY 157

[Close]

BLAST of Spo11404.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CKG3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g098180 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 7.700e-27
Identity = 64/107 (59.81%), Postives = 80/107 (74.77%), Query Frame = 1


		  
Query: 1   MSKVLYLAFLVAVLVVSTPALAQDDGIPVPECVTELHPCGPFINSTTAEPPFECCQPLGT 60
           MSKVL LA L+ VL VS+   AQ   + +P+CV+EL PCGPF NSTT  PP +CCQPL  
Sbjct: 1   MSKVLCLAALMVVLAVSS---AQAQNVEMPQCVSELGPCGPFTNSTTVAPPTQCCQPLQN 60

Query: 61  VIQNDLSCLCSVFSNDELIQSLSVNVSEAITLPMRCSIPFDLVAECQ 108
           +IQNDLSCLC+VF+N EL  +L +NV+EA TLP RC++  DL+A CQ
Sbjct: 61  LIQNDLSCLCTVFANVELATTLMINVTEAATLPQRCNLQIDLLARCQ 104

[Close]

BLAST of Spo11404.1 vs. ExPASy Swiss-Prot
Match: VAS_ARATH (Lipid transfer-like protein VAS OS=Arabidopsis thaliana GN=VAS PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 9.700e-7
Identity = 38/132 (28.79%), Postives = 66/132 (50.00%), Query Frame = 1


		  
Query: 1   MSKVLYLAFLVAVLVVSTPALAQDDGIPVPECVTELHPCGPFINSTTAEPPFECCQPLGT 60
           M  + + +F V +L+V+  +  + +G  V  C+ +L PC  ++N T  E P  CC PL +
Sbjct: 2   MMGMKFFSFYVVLLLVAASSGMRINGQSV-SCLNQLAPCLNYLNGTK-EVPQVCCNPLKS 61

Query: 61  VIQNDLSCLCSVFSN--DELIQSLSVNVSEAITLPMRCS---IPFDLVAECQGYQSQRDK 120
           VI+N+  CLC + SN      +   ++V++A  LP RC     P   +   +G  +  D+
Sbjct: 62  VIRNNPECLCRMISNRWSSQAERAGIDVNDAQMLPARCGEHVNPIACLTRSRGGSTNSDR 121

Query: 121 KITGSNFIHPSF 128
             +  N    S+
Sbjct: 122 SSSIGNTFSQSY 131

[Close]

BLAST of Spo11404.1 vs. TAIR (Arabidopsis)
Match: AT1G62790.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 74.7 bits (182), Expect = 1.900e-13
Identity = 50/152 (32.89%), Postives = 77/152 (50.66%), Query Frame = 1


		  
Query: 391 MSKYLAVVLAVAVAVVILATPLAVAQETPSCASRLTGCLNYMNATTTPPSSCCNPLKEAV 450
           M+K + +  A    + +L  P   AQ    C S+L  C N +N TTTP   CC+ +KEAV
Sbjct: 1   MTKTMMIFAAAMTVMALLLVPTIEAQT--ECVSKLVPCFNDLNTTTTPVKECCDSIKEAV 60

Query: 451 MNEKACLCSIYGNPALIQAFHINVTQALNLPKLCHIDTGKSPNICTGVATSPSSTSTPSR 510
             E  CLC+IY +P L+  F++   +AL L + C++ T  S     G A SP ++  P  
Sbjct: 61  EKELTCLCTIYTSPGLLAQFNVTTEKALGLSRRCNVTTDLSACTAKG-APSPKASLPP-- 120

Query: 511 SSPPGN------AAGRITGAGLVASLLMMFGA 537
            +P GN      A  ++ G G+   +L +  +
Sbjct: 121 PAPAGNTKKDAGAGNKLAGYGVTTVILSLISS 147

[Close]

BLAST of Spo11404.1 vs. TAIR (Arabidopsis)
Match: AT1G73560.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 72.4 bits (176), Expect = 9.600e-13
Identity = 35/98 (35.71%), Postives = 58/98 (59.18%), Query Frame = 1


		  
Query: 6   YLAFLVAVLVV-STPALAQDDGIPVPECVTELHPCGPFINSTTAEPPFECCQPLGTVIQN 65
           +LA +VAV+V+ S  A AQ     +  C+ +L PC P+I+S    PP  CC P+  +++ 
Sbjct: 6   FLAVVVAVVVLYSVEATAQGGNPQLTACLQKLLPCQPYIHSLNPPPPPSCCGPMKEIVEK 65

Query: 66  DLSCLCSVFSNDELIQSLSVNVSEAITLPMRCSIPFDL 103
           D  CLC  F+N E++++L++    A+ LP  C +  D+
Sbjct: 66  DAPCLCIAFNNPEVLKALNLTKENALLLPKACGVNPDV 103

[Close]

BLAST of Spo11404.1 vs. TAIR (Arabidopsis)
Match: AT1G70250.1 (receptor serine/threonine kinase, putative)

HSP 1 Score: 68.9 bits (167), Expect = 1.100e-11
Identity = 42/130 (32.31%), Postives = 64/130 (49.23%), Query Frame = 1


		  
Query: 407 ILATPLAVAQETPSCASRLTGCLNYMNATTTPPSSCCNPLKEAVMNEKACLCSIYGNPAL 466
           +L T + V  +T  C S++  C  ++N TT P + CCN +KEA+  + +CLC+IY  P L
Sbjct: 10  VLVTVVEVEAQT-ECVSKIVPCFRFLNTTTKPSTDCCNSIKEAMEKDFSCLCTIYNTPGL 69

Query: 467 IQAFHINVTQALNLPKLCHIDTGKSPNICTGVAT----------------SPSSTSTPSR 521
           +  F+I   QAL L   C ++T  S   C+G                    P   S+P+ 
Sbjct: 70  LAQFNITTDQALGLNLRCGVNTDLS--ACSGSGAPPPPPDLFPPPSAQMLPPPPASSPAP 129

[Close]

BLAST of Spo11404.1 vs. TAIR (Arabidopsis)
Match: AT1G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 65.5 bits (158), Expect = 1.200e-10
Identity = 26/71 (36.62%), Postives = 44/71 (61.97%), Query Frame = 1


		  
Query: 32  CVTELHPCGPFINSTTAEPPFECCQPLGTVIQNDLSCLCSVFSNDELIQSLSVNVSEAIT 91
           C+ +L PC P+++  T  PP  CC PL  ++  D +CLC+VF+N ++++SL++    A+ 
Sbjct: 41  CIQKLMPCQPYLHLATP-PPATCCMPLNEIVAKDATCLCAVFNNVDMLKSLNLTKENALD 100

Query: 92  LPMRCSIPFDL 103
           LP  C    D+
Sbjct: 101 LPKACGAKADV 110

[Close]

BLAST of Spo11404.1 vs. TAIR (Arabidopsis)
Match: AT1G73550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 58.2 bits (139), Expect = 1.900e-8
Identity = 25/70 (35.71%), Postives = 41/70 (58.57%), Query Frame = 1


		  
Query: 32  CVTELHPCGPFINSTTAEPPFECCQPLGTVIQNDLSCLCSVFSNDELIQSLSVNVSEAIT 91
           CV +L PC P+I+ +   PP  CC P+  + + D+SCLC+ F + +L++ L++    AI 
Sbjct: 35  CVAKLMPCQPYIHLSIPPPPL-CCNPMKQIAEKDVSCLCTAFKHPDLLRFLALTKENAIK 94

Query: 92  LPMRCSIPFD 102
           +   C I  D
Sbjct: 95  ILDSCGINHD 103

The following BLAST results are available for this feature:

BLAST of Spo11404.1 vs. NCBI nr
BLAST of Spo11404.1 vs. UniProtKB/TrEMBL
BLAST of Spo11404.1 vs. ExPASy Swiss-Prot
BLAST of Spo11404.1 vs. TAIR (Arabidopsis)

BLAST of Spo11404.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902207475\|gb\|KNA15713.1\|	8.3e-75	100.	hypothetical protein SOVF_0956...	[more]
gi\|902220152\|gb\|KNA18503.1\|	5.6e-63	100.	hypothetical protein SOVF_0701...	[more]
gi\|731330573\|ref\|XP_010676204.1\|	1.3e-43	65.2	PREDICTED: protein YLS3-like [...	[more]
gi\|731330575\|ref\|XP_010676205.1\|	6.2e-38	59.2	PREDICTED: lipid transfer-like...	[more]
gi\|731330569\|ref\|XP_010676202.1\|	1.1e-26	59.8	PREDICTED: non-specific lipid-...	[more]

BLAST of Spo11404.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R849_SPIOL	5.8e-75	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9RG87_SPIOL	3.9e-63	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CFP5_BETVU	9.0e-44	65.2	Uncharacterized protein OS=Bet...	[more]
A0A0J8F9N3_BETVU	4.3e-38	59.2	Uncharacterized protein OS=Bet...	[more]
A0A0J8CKG3_BETVU	7.7e-27	59.8	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo11404.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
VAS_ARATH	9.7e-7	28.7	Lipid transfer-like protein VA...	[more]

BLAST of Spo11404.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G62790.1	1.9e-13	32.8	Bifunctional inhibitor/lipid-t...	[more]
AT1G73560.1	9.6e-13	35.7	Bifunctional inhibitor/lipid-t...	[more]
AT1G70250.1	1.1e-11	32.3	receptor serine/threonine kina...	[more]
AT1G18280.1	1.2e-10	36.6	Bifunctional inhibitor/lipid-t...	[more]
AT1G73550.1	1.9e-8	35.7	Bifunctional inhibitor/lipid-t...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 402..488 score: 8.9E-15coord: 172..258 score: 1.7E-13coord: 14..102 score: 1.4
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 39..106 score: 4.2coord: 421..495 score: 6.0coord: 191..266 score:
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 189..258 score: 4.08E-12coord: 419..489 score: 5.1E-12coord: 31..106 score: 1.51
None	No IPR available	GENE3D	1.10.110.10		coord: 193..257 score: 2.3E-7coord: 33..106 score: 2.2E-9coord: 422..489 score: 1.
None	No IPR available	PANTHER	PTHR33044	FAMILY NOT NAMED	coord: 387..522 score: 7.9
None	No IPR available	PANTHER	PTHR33044:SF37	SUBFAMILY NOT NAMED	coord: 387..522 score: 7.9

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042744	hydrogen peroxide catabolic process
biological_process	GO:0009651	response to salt stress
biological_process	GO:0032259	methylation
biological_process	GO:0019447	D-cysteine catabolic process
biological_process	GO:0009693	ethylene biosynthetic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006508	proteolysis
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0032880	regulation of protein localization
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005829	cytosol
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0009840	chloroplastic endopeptidase Clp complex
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0009941	chloroplast envelope
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008660	1-aminocyclopropane-1-carboxylate deaminase activity
molecular_function	GO:0050897	cobalt ion binding
molecular_function	GO:0019148	D-cysteine desulfhydrase activity
molecular_function	GO:0008168	methyltransferase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo11336	0.70	Barchart \| Table
Spo04789	0.70	Barchart \| Table
Spo24203	0.68	Barchart \| Table
Spo26368	0.68	Barchart \| Table
Spo00538	0.67	Barchart \| Table
Spo04986	0.66	Barchart \| Table
Spo11682	0.66	Barchart \| Table