Spo11276 (gene)

Overview
NameSpo11276
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_01478 : 40157 .. 44938 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTTGGTCCCCAAAGTTCGCCATCATGGTTGCTTTTTACCTCCTGGTTAGCAATTCTCCTACCCTTTTCTATTCGAAAAAATTGAAAGTGCAAGAAATTCCGTTATTTTTGTGTGTGTGAGGGGAGGGGGGGTGTTAACTGCCCATGATTTTATTCATTGCCTCTGTTTCCGTATGAATTATACTAACAACAAAGCCAGCTGTCTGTTATACTATGATTTTACATGAATGCCCATGCAGCGGTGATGCAAGTCGGACACAACTCTGAATTGTTTTTAATCTTTGCGATAAGCTTTAGCTTTGTAATCCTAACTCTCATGTTTTCCCTTCCTTTACCCATGTCAGACAGGTTTCTGTTCGGTTGCTTTGGTATATAATTTCACTTAACCATGATACATAATTCTATGTTATAACGAGCTTATCACTTTTGATGAATCTTAGCAAGTAGAAATATACTTCGCAAGCTATTTCAGTACCTCACATCATGTTCATCACTGCTGGAATGTTTTCTACTGTCGTTCTCATTTTAGCAGGTTAAATTTGCAGGACACAAGCAATCACTGTTGTTCTTCATGATCTACCAGAAACTTCTTTGGCTCATGGAAGCCTTACTGCAAGAAATTTTCCCATCCCTGAGCTCCACGGGCACCATGACAGAGATTGCAGATCTTTGCATCAGCAAGTTTGCTACTTGTGGACCTCATCCTTACACAGTGTGTCTTATTCTCAAAATTAACACGTTGTAGATGTTGGCCATTATATATTATTCAATGCAATGTAACAGGCATCTGTGCGTTCTCTTTCCCGAGAAGTTGAGACAACATCTCCCTTTGGCCTCTACATGCCCTTAGCCCCTTGCCTGCAGTTAACCAGGTAGGCAGGTAATATTAGGATTTTATCCTTCGTGAAATTTTACTAAAACATGCTTTAAGTAAATTTGATTTATGAGGTGTATGTGAACTTTTTTTCTTGCTTTTCAGACAGGGAGCTTTTAGAGGACATTTATTAAAGCTCACACCAGCTAGTTTTTTGCAGCTTAAAATAGTCATCGGGTATATGCTTTCCAATATTTAAAATCTTTCAAGTAATTTTTTTCCTCAATCATTTTGTTGCTCCTCTATAAACATAGATAAGTTGAGGAATTCAATCAACTACCTAGTGGAAATCTACCTAGATGTATAAATCAAACAAGATATTAGTTTATATACATGTTGGCAGTATGTTACCTGTGTTACTTCACTTGGGTTTATTATTTGACTTAATTAGCTTTTGTGTAGGTTTGCTATAATCTATTCTAATATTTAATAGCAGGCCAGTTGGAGAACCACGTGTCCCCCCCTTGGAATTTAAAATTTTTATTACATTTTTTTTTAAGTTAACAGCCAAAAAATCAACGAAAAAAATCAGATCTTCTACCCTCTTCTCCGACCTTCAATTCTCTCCTCCAACGGTCCAACCTTCACACCTGCAAAATCATAAACCGGAAAACCCGAATATGCATCAATTCAAGAATAAATTATCTCCAAGCTCAAAACCAATCTCAAATTATGAGTTTAATTTCAAAAAAATTGATATTTGGGAACTGTTATCTTCTTCTATTTCATGAGTTATGGCAGTCATGACCAAACAATTCAAGCTTCATATTTTGATAAAATACCCACAAGAACCACGCATGTAAACCCATAAATCATAAACCACCCATTATCTTCTACTCACTTTCTCCTACCTCATGCTAATCGTTTTACCACAGCATGGTTTCTTCGTCTTCATCGGATGAACCATGGCCAATTACTAAGTCTCTTCAACTCCTCTTGAGTTCAATTGAAATTGATAACACTGAAATTAATTGATTAATTTCAAGTTCACACTGATGAATCATTGCATGGCTTCTTGGTCTTGCTGGGAAATTGATTTTGTCTCTCGGTATCTCCACTCTTTCTCTTCCCATACTTGCTTTTCATCTCCATTCAATCTTCCATCTTTATTAATTAGATTTTTTTTTCTTTTTATTTCTGAATTCCAACAAAATGCCTTTTACTGGAAACCCAATTCAACACCATCAACCACCGCAGCAACAACCACAACGGTGTAACGATTATATACATATTCTAACAGTTTATTTTTGGGTAAGTTTGGTTTAGTTGTTTTGTTGCCCTTATTTTATTCCATGAAAATAAATCAATTGTCTCTTATAGAAAAGGTGACGATTCAATTGGATAATTATTTTTTAATTAATTAAATGGGTAACTGCTTCTCTGAACGTTCTAAAAAAATTATCCTAGGATACATTCTATAAACATAATACATAGTATGTCACTAGAAATCTGGGAAAAAAAGTCATTACTACATTGTTCATCACTTGATAATGTAAGTTACTCCATTGTTGCGTTTTTCTTATATTCCATTCTCTATATTGATTTGCTTCGATGACACGTACGTGTTTCAAGGGATATGAATTTCTATAGTATCAGCATTTCCAAATTTAACATAATCTCAATGTCTTCCTGCAGAGCAAATTAAGTGTTGTACCATTGATCAAAGTGGTCCTACTGTTTCCGATTATTAGGTAAGTATTTAGACTATATTCTTATCTTCTTCCTTGCAAAGTTGGAATTTTTTTTTTTTCCTTCTAATTCCCTCAAATGGGTGAATAAACTATTGGTTAAATTAGAATTTAGTTGAGTTTTAAAATAGAAATTTGTGTAATTGCGATGCATATAATAGTATAAGATGATTTCTTTGTGTTAAGTAATTACACAAATAATTGGTTTTTGTGATAATTGATGCATATAATTGTTATGGAAATTTCTCTCATTTAAAATGGTTTTGCAGAATGATTGATTACGTTAAAGTGGTGCAATTTCAGTATAGGGGGAAGGATATAGATGTTAGAACTGAAGTTCATAAGTGTTGCCTACTTGTGATGCCTTGATGAATTTTGAGGATATTTCCAGGAAAATGGGACCTATGATAAATTTTCATTATCCTACATTTCCTTATGTGTTTAAGATAATACATTGCGATCTCCGAATGGATGGAGATTTGATAACCATGTTCAATAGGTTGCCTACTCCATTAAACAAATTGGTGATACATTTTAGATAATAAAATTCCAATAAGACTGACTAACCTGTTCGTGAACTCCATTAGCTTTCCCTGATGTTACTTCAGCAATAGAATAACTAACACCCGGCCCTACAACAAGGCTTATGCTGTAATACCACCATTTTCCAGGATTTCCAACAATAATTTATGTTCAGAAAAGCGAGTTTAGTTTTCCTAAATTTTAATTTTTAATTTTTAGTTGAGTTTAGAAATGTAGTTCAATGTAGAATTCATCTCAAACTTTAATGAGAACAGATGATGGATTAAAGAATTCAAAGGAGTGCACATAAGAATTATCAAAACATTGCCTGTTCTCATATGGTCATCATTGGTGTTGTTTCCCCTATTTTTGAATTGGTATTTTAGCCTCAGCGTTGAAGGGATTAATGCCTTTGTTCTTTATCGAGTTTGAAATGCTGATTATATGCCCTTGTATTGTATTCAAAATCATGTTGTTGTATTTTGGGTTTATCTCCTATTTTCTTTCATTAGAAAAGTTCTACTAAAACAGTGAAGTTATAGCCTTGCGTCTAATCAACACTCATGTTTTAGCAATGTGTGGTACTCTTCTTTGGATCTTTTCCTTGCTCTTTGTGTTAATAGAATGCCATAAAGTATTCTTGGAATTTTAAGCTTTCTTAGGTGGCATGCTACTTTTGGCATGACTGCATCATCTATTTATTTTGATAGTCTTACTATGGGAGTTTGTAATTGGGGTTGAAGTTTTGGATTCTATTAATGGTCTCTTGAGTTGAAACAAATTTCTTGAACCTTGGAAAAAGGGTCAGTACTCAGTAGAGAGGGGTGATTAGTTTGTATCGTGAATGTATTTTCTCAAACTGCAGTGTTACTCTAAATCTTCACCAAAGAAATTGAAATTTCAAAGCAAGTACTAAAATCTTGACTACATTAGTCATTGACAGATTTGGTTGCCTAAATTTATTTATTTTAAAGTGCTATCATGTTATTCTTCTATACCCCTTTTACTTATGCATTACTTGTCAAGTTAACCTAAATGCAGGAGCATCCCATTCTCCACAGAAGTGAAAAATACATCACAATTTGAGGACAAGAAAGGGTAAATCTGTTGTGCAACAGAAAATTTACATGGTATAACTACTATTAAAATTTTGCAGGATTTTGGTTTGTGTAATACTCATAAGTCAAAACTAGCATGTAATTGCTACATTACTTTGCAGCATAAGCAGGATGTCCCCATGAAGGAAAATCAGCTACTTTGTACGGAGTATATGACTTCTTTTCATTAAAATTCAATTATTGGTGGTGCAACTCCAAGCACAGAATTGTTTCCTTCATGTTTTGGTCTTTGAAATCATCAGGAAACATCAATATTACATCACTTGCAGAATTTGTTCTACAGTTCAACAACCAAATATGTTAACCTAGGATTATTCTTGCGTCCACAATAATATTAGTGTGGACCGAAAATCAATAGTTTTATGTAGCACTTTTTTTACACGTTCATATAGTAACTATAATAAATTAAACACCAAAATTCTTAGACATAGTAACCATTTTTTGAAGCATAGTATCCCTATGTTTTTAAAAGCGAATTGTGACTTAAAATCACATTATTCAAGCATAACATGTATTGACGACACTAATTTGATATTTTTTTTCCATAATAATCTTAATAAAATGCCAAAATAAAT

mRNA sequence

ATGGAAGTTGGTCCCCAAAGTTCGCCATCATGGTTGCTTTTTACCTCCTGGACACAAGCAATCACTGTTGTTCTTCATGATCTACCAGAAACTTCTTTGGCTCATGGAAGCCTTACTGCAAGAAATTTTCCCATCCCTGAGCTCCACGGGCACCATGACAGAGATTGCAGATCTTTGCATCAGCAAGTTTGCTACTTGTGGACCTCATCCTTACACAGCATCTTTAACCAGGTAGGCAGACAGGGAGCTTTTAGAGGACATTTATTAAAGCTCACACCAGCTAGTTTTTTGCAGCTTAAAATAGTCATCGGAGCAAATTAAGTGTTGTACCATTGATCAAAGTGGTCCTACTGTTTCCGATTATTAGGAGCATCCCATTCTCCACAGAAGTGAAAAATACATCACAATTTGAGGACAAGAAAGGGTAAATCTGTTGTGCAACAGAAAATTTACATGCATAAGCAGGATGTCCCCATGAAGGAAAATCAGCTACTTTGTACGGAGTATATGACTTCTTTTCATTAAAATTCAATTATTGGTGGTGCAACTCCAAGCACAGAATTGTTTCCTTCATGTTTTGGTCTTTGAAATCATCAGGAAACATCAATATTACATCACTTGCAGAATTTGTTCTACAGTTCAACAACCAAATATGTTAACCTAGGATTATTCTTGCGTCCACAATAATATTAGTGTGGACCGAAAATCAATAGTTTTATGTAGCACTTTTTTTACACGTTCATATAGTAACTATAATAAATTAAACACCAAAATTCTTAGACATAGTAACCATTTTTTGAAGCATAGTATCCCTATGTTTTTAAAAGCGAATTGTGACTTAAAATCACATTATTCAAGCATAACATGTATTGACGACACTAATTTGATATTTTTTTTCCATAATAATCTTAATAAAATGCCAAAATAAAT

Coding sequence (CDS)

ATGGAAGTTGGTCCCCAAAGTTCGCCATCATGGTTGCTTTTTACCTCCTGGACACAAGCAATCACTGTTGTTCTTCATGATCTACCAGAAACTTCTTTGGCTCATGGAAGCCTTACTGCAAGAAATTTTCCCATCCCTGAGCTCCACGGGCACCATGACAGAGATTGCAGATCTTTGCATCAGCAAGTTTGCTACTTGTGGACCTCATCCTTACACAGCATCTTTAACCAGGTAGGCAGACAGGGAGCTTTTAGAGGACATTTATTAAAGCTCACACCAGCTAGTTTTTTGCAGCTTAAAATAGTCATCGGAGCAAATTAA

Protein sequence

MEVGPQSSPSWLLFTSWTQAITVVLHDLPETSLAHGSLTARNFPIPELHGHHDRDCRSLHQQVCYLWTSSLHSIFNQVGRQGAFRGHLLKLTPASFLQLKIVIGAN
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo11276.1Spo11276.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo11276.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo11276.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo11276.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo11276.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009409 response to cold
biological_process GO:0006508 proteolysis
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0006574 valine catabolic process
biological_process GO:0000226 microtubule cytoskeleton organization
biological_process GO:0009651 response to salt stress
biological_process GO:0007165 signal transduction
biological_process GO:0042908 xenobiotic transport
biological_process GO:0016123 xanthophyll biosynthetic process
biological_process GO:0030007 cellular potassium ion homeostasis
biological_process GO:0019482 beta-alanine metabolic process
biological_process GO:0016119 carotene metabolic process
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0006550 isoleucine catabolic process
biological_process GO:0006552 leucine catabolic process
biological_process GO:0009733 response to auxin
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0043090 amino acid import
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0009863 salicylic acid mediated signaling pathway
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0051090 regulation of DNA-binding transcription factor activity
biological_process GO:0008152 metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0030968 endoplasmic reticulum unfolded protein response
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005634 nucleus
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005777 peroxisome
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0000325 plant-type vacuole
cellular_component GO:0016020 membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0010291 carotene beta-ring hydroxylase activity
molecular_function GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0008559 xenobiotic transmembrane transporting ATPase activity
molecular_function GO:0008281 sulfonylurea receptor activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016746 transferase activity, transferring acyl groups
molecular_function GO:0046982 protein heterodimerization activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo226940.76Barchart | Table
Spo144520.74Barchart | Table
Spo142400.73Barchart | Table
Spo165760.73Barchart | Table
Spo155240.73Barchart | Table
Spo218230.71Barchart | Table
Spo237450.71Barchart | Table
Spo194970.71Barchart | Table
Spo261910.71Barchart | Table
Spo220860.70Barchart | Table
Spo018870.70Barchart | Table
Spo031100.70Barchart | Table
Spo046590.70Barchart | Table
Spo112850.70Barchart | Table
Spo131610.70Barchart | Table
Spo244300.70Barchart | Table
Spo259870.70Barchart | Table
Spo137870.69Barchart | Table
Spo113520.69Barchart | Table
Spo084070.69Barchart | Table
Spo231250.69Barchart | Table
Spo231280.69Barchart | Table
Spo233320.69Barchart | Table
Spo123320.69Barchart | Table
Spo090080.69Barchart | Table
Spo159950.68Barchart | Table
Spo077410.67Barchart | Table
Spo152220.67Barchart | Table
Spo065740.67Barchart | Table
Spo011550.67Barchart | Table
Spo226650.67Barchart | Table
Spo047780.67Barchart | Table
Spo092200.67Barchart | Table
Spo181700.67Barchart | Table
Spo013440.67Barchart | Table
Spo179800.67Barchart | Table
Spo094270.66Barchart | Table
Spo107560.66Barchart | Table
Spo269900.66Barchart | Table
Spo082600.66Barchart | Table
Spo171860.66Barchart | Table
Spo176850.66Barchart | Table
Spo182850.66Barchart | Table
Spo036650.66Barchart | Table
Spo026650.66Barchart | Table
Spo011590.66Barchart | Table
Spo255730.66Barchart | Table
Spo016280.65Barchart | Table
Spo260730.65Barchart | Table
Spo119640.65Barchart | Table
Spo105550.65Barchart | Table