Spo11208 (gene)

Overview
NameSpo11208
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionProbable calcium-binding protein CML13 (Calmodulin-like protein 13)
LocationSuper_scaffold_134 : 378719 .. 381224 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAAGTGCTAGGACGGTGAGGAAAGATAAGCCACGTGGGCGTCATCATGGTCTCACTCAACAGAAGAGGCAAGAGATAAAGGAAGCTTTTGAACTGTTTGACACTGATGGCTCAGGTTTTGAATCTGTTTTGTGTTTCGAATTTTATATGTCAAACCATTTAGTTTGTTCTCGCAATCTCGCCTGTTTGATTCAAATTGTTATTTTCAGGAACTATTGATGCTAAGGAGTTGAATGTTGCTATGAGGTATTATTCTTTGTAAATCCTAAGGTTTTGATATACCACTACACACTTAACACAGTTACCTGACCTAAAACTGCATCGTTGCAGTGCTCTGGGTTTTGAGATGACCGAAGAGGTATAAAATCTGTCATTTTGTTGGTTTTTTGTTGATTACGATTGAAATATTTCTTCTCTGAATACTTGCAAAAAGATAACCTATGTTCCTTCCACTATTCTTTTTCTTCTCTGGGTTCTAAGACACTCAGACAAGGGTGTGGCCTCCTTAACTGACACTTCAATATTTACCCAGAGTCTCATAATACCTCAACGGCTCAACCATCTCGAACCACATATTCATAGAGAAAATTAGAAAAATAAAACAAGAGAGGGGTAATGAAGAGAAAGTTGTGCATATGTATACTCACAAATGAGCTTGAAATGAGAATTCATACAAGAATTAGCAAACAAGTCAGCCTGAATTGTGTTGTGTATTTATGTATCTACAATTACAACCGGATCTGAAAAAGAAAAGGTATTTTAGAGTGAGGATATGTTTCTTATACTTGTTATGTCATGTCCCCATCCCCGTGTTTAATTTTATGACAGCGTACCTGTGTCTGAAATTTTACACCTATCTTGCCCTGGCACTTGGACATGTACACTTGTACTCGACACTCGTACCCATGTCCAAGTAACATAGATGATTATACTCTTATAAAATGTTCATGTTTTACTTGAGATTCAAATGCATCATTTAAGTTTTTAGGCCACCTCCTGAAACTATCTTGAGTGCAGTAACTGCTAGTGCCAGCCCCTTTCTCTGAGCTTATTTAATTATGTCAGCGACAAACTACAGTACATCCAGCCTCTCTCATAGTTCCCATATATCATATATGGGCCACCTGAAATTTATTTTAAGGTATCCTTTTTATAGATTATATTTACTCACCATTTTTGCTCTGGTTGCAATAAAGGAAGGGAAAGGTAATTGATTAAGGGGACTGCGGTTTGTTATAACAGCTACTGTGCTTGACTTTTTGTGTTATTTCAGCAAATCAATCAAATGATTGCGGATGTTGACAAGGATGGAAGTGGTGCCATTGATTTCGATGAATTTTGTCACATGATGACTGCTAAAATCGGAGAAAGAGACACTAAGGAAGAATTAATGAAAGCATTTCGTATAATCGACCAAGATAATAATGTAAACCTCTGTTTATTCTTGTTTTAGTGTCTTATTTCAGTCATCAGTGATTAACATATAAGAATGGTGGTTGGTTGGTGTAGGGTAAGATTTCTCCTGTAGATATTCAACGCATTGCAAAGGAATTGGGCGAAAACCTAACTGACAGGGAAATCCAAGAGATGATTGAAGAAGCAGACCGAGATCGTAAGTTCCCTCCTTTTCCTGCTATGATTGATTGATGAAGGTTAGTTAAGAACATGATGAGCCATTTTCAGGGTGAATAATCATCAACGTTCCGTGAATTTTGGTGTTAACAAGGTGTTGTTTGGTTGACATAAAAAACATAGGAAGTTGGACTTAATAGGAATTGCAAAGTATGTGAATTGTTTGGTTAACAAAGTTTTTGTGAAATGGGGGAAGTGAAACTTCCTGGGAATTTCAATATCTTACAAAATGTGGGAATTTGCTTACCTAGTCCCCCCTAGGTAAGTAGAAATTCACATAGGAAGTTACTTCCACATTATCAACCAAACAACTTTAGGAAATTCCCATGAATTTAATTAAGGAATCCACTTCCTATGATTTTGTATTTCATGGAAAATTCTACTTCCTATGTGAACCGGACGACACCTAAGTGAGCACGCAGGAAACATTCTATTTTGGTGTACGTGGTAGGTGCTTATTTTCCGACCTTATACTCACTTCTGAATCATACAGGTGACGGCGAGGTCAATGTTGAGGAGTTTCTGAGGATGATGAAGAGAACGTCGTATGCATACTGAAATTGAACCTAAGTTAGTTCTGCACCATGCGTTACTAGAAGCTGCGTCTGCTGCTGTATGTGATGTGTACATGTTGACTGTTACCACTGAGCATTGCTGAGTGGTCTAGTGAAAGGGTTGCTAATGTGTGTTTTATGGGTTAATGTTCTTGTTTGTTTATGTTTTTCGTTATTTATTTGTAGTTACTCAACAGTTATAGACCTAATATGAATTTTATCATCTTTTGGAAGAAAGTAATGTCTGATGCTGAAACTTGTGGCTTCTGTATCAAATTTCTTAAGTTCCTCACAAGTAGTCACAACAGAATGTTTACCAA

mRNA sequence

TCAAGTGCTAGGACGGTGAGGAAAGATAAGCCACGTGGGCGTCATCATGGTCTCACTCAACAGAAGAGGCAAGAGATAAAGGAAGCTTTTGAACTGTTTGACACTGATGGCTCAGGAACTATTGATGCTAAGGAGTTGAATGTTGCTATGAGTGCTCTGGGTTTTGAGATGACCGAAGAGCAAATCAATCAAATGATTGCGGATGTTGACAAGGATGGAAGTGGTGCCATTGATTTCGATGAATTTTGTCACATGATGACTGCTAAAATCGGAGAAAGAGACACTAAGGAAGAATTAATGAAAGCATTTCGTATAATCGACCAAGATAATAATGGTAAGATTTCTCCTGTAGATATTCAACGCATTGCAAAGGAATTGGGCGAAAACCTAACTGACAGGGAAATCCAAGAGATGATTGAAGAAGCAGACCGAGATCGTGACGGCGAGGTCAATGTTGAGGAGTTTCTGAGGATGATGAAGAGAACGTCGTATGCATACTGAAATTGAACCTAAGTTAGTTCTGCACCATGCGTTACTAGAAGCTGCGTCTGCTGCTGTATGTGATGTGTACATGTTGACTGTTACCACTGAGCATTGCTGAGTGGTCTAGTGAAAGGGTTGCTAATGTGTGTTTTATGGGTTAATGTTCTTGTTTGTTTATGTTTTTCGTTATTTATTTGTAGTTACTCAACAGTTATAGACCTAATATGAATTTTATCATCTTTTGGAAGAAAGTAATGTCTGATGCTGAAACTTGTGGCTTCTGTATCAAATTTCTTAAGTTCCTCACAAGTAGTCACAACAGAATGTTTACCAA

Coding sequence (CDS)

TCAAGTGCTAGGACGGTGAGGAAAGATAAGCCACGTGGGCGTCATCATGGTCTCACTCAACAGAAGAGGCAAGAGATAAAGGAAGCTTTTGAACTGTTTGACACTGATGGCTCAGGAACTATTGATGCTAAGGAGTTGAATGTTGCTATGAGTGCTCTGGGTTTTGAGATGACCGAAGAGCAAATCAATCAAATGATTGCGGATGTTGACAAGGATGGAAGTGGTGCCATTGATTTCGATGAATTTTGTCACATGATGACTGCTAAAATCGGAGAAAGAGACACTAAGGAAGAATTAATGAAAGCATTTCGTATAATCGACCAAGATAATAATGGTAAGATTTCTCCTGTAGATATTCAACGCATTGCAAAGGAATTGGGCGAAAACCTAACTGACAGGGAAATCCAAGAGATGATTGAAGAAGCAGACCGAGATCGTGACGGCGAGGTCAATGTTGAGGAGTTTCTGAGGATGATGAAGAGAACGTCGTATGCATACTGA

Protein sequence

SSARTVRKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMSALGFEMTEEQINQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPVDIQRIAKELGENLTDREIQEMIEEADRDRDGEVNVEEFLRMMKRTSYAY
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo11208.1Spo11208.1mRNA


Homology
[Close]
BLAST of Spo11208.1 vs. NCBI nr
Match: gi|731327145|ref|XP_010674374.1| (PREDICTED: caltractin isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 317.0 bits (811), Expect = 2.000e-83
Identity = 161/166 (96.99%), Postives = 163/166 (98.19%), Query Frame = 1 

		  

Query: 1   SSARTVRKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMSALGFEMTEE 60
           SSARTVRKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAM ALGFEMTEE
Sbjct: 2   SSARTVRKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 61

Query: 61  QINQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPVDIQ 120
           QINQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISP DIQ
Sbjct: 62  QINQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPADIQ 121

Query: 121 RIAKELGENLTDREIQEMIEEADRDRDGEVNVEEFLRMMKRTSYAY 167
           RIAK+LGEN TDR+IQEMIEEADRDRDGEVNVEEFLRMMKRTSYAY
Sbjct: 122 RIAKDLGENFTDRDIQEMIEEADRDRDGEVNVEEFLRMMKRTSYAY 167
[Close]
BLAST of Spo11208.1 vs. NCBI nr
Match: gi|731327143|ref|XP_010674373.1| (PREDICTED: caltractin isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 317.0 bits (811), Expect = 2.000e-83
Identity = 161/166 (96.99%), Postives = 163/166 (98.19%), Query Frame = 1 

		  

Query: 1   SSARTVRKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMSALGFEMTEE 60
           SSARTVRKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAM ALGFEMTEE
Sbjct: 3   SSARTVRKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 62

Query: 61  QINQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPVDIQ 120
           QINQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISP DIQ
Sbjct: 63  QINQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPADIQ 122

Query: 121 RIAKELGENLTDREIQEMIEEADRDRDGEVNVEEFLRMMKRTSYAY 167
           RIAK+LGEN TDR+IQEMIEEADRDRDGEVNVEEFLRMMKRTSYAY
Sbjct: 123 RIAKDLGENFTDRDIQEMIEEADRDRDGEVNVEEFLRMMKRTSYAY 168
[Close]
BLAST of Spo11208.1 vs. NCBI nr
Match: gi|729051|sp|P41210.1|CATR_ATRNU (RecName: Full=Caltractin; AltName: Full=Centrin)

HSP 1 Score: 311.6 bits (797), Expect = 8.200e-82
Identity = 159/166 (95.78%), Postives = 162/166 (97.59%), Query Frame = 1 

		  

Query: 1   SSARTVRKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMSALGFEMTEE 60
           SSARTVRKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAM ALGFEMTEE
Sbjct: 2   SSARTVRKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 61

Query: 61  QINQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPVDIQ 120
           QINQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISP DIQ
Sbjct: 62  QINQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPEDIQ 121

Query: 121 RIAKELGENLTDREIQEMIEEADRDRDGEVNVEEFLRMMKRTSYAY 167
           RIAKELGEN T ++IQ+MIEEADRDRDGEVNVEEFLRMMKRTSYAY
Sbjct: 122 RIAKELGENFTVKDIQDMIEEADRDRDGEVNVEEFLRMMKRTSYAY 167
[Close]
BLAST of Spo11208.1 vs. NCBI nr
Match: gi|694401292|ref|XP_009375705.1| (PREDICTED: probable calcium-binding protein CML20 [Pyrus x bretschneideri])

HSP 1 Score: 284.3 bits (726), Expect = 1.400e-73
Identity = 143/160 (89.38%), Postives = 150/160 (93.75%), Query Frame = 1 

		  

Query: 7   RKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMSALGFEMTEEQINQMI 66
           RK+KPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAM ALGFEMTEEQINQMI
Sbjct: 10  RKEKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMI 69

Query: 67  ADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPVDIQRIAKEL 126
           ADVDKDGSGAIDFDEF HMMTAKIGERDTKEELMKAF++ID D NGKIS  DI+ IAK+L
Sbjct: 70  ADVDKDGSGAIDFDEFAHMMTAKIGERDTKEELMKAFQLIDLDRNGKISAADIKNIAKDL 129

Query: 127 GENLTDREIQEMIEEADRDRDGEVNVEEFLRMMKRTSYAY 167
           GEN TDREIQEMIEEADRDRDGEVN EEF+RMMKRT+Y Y
Sbjct: 130 GENFTDREIQEMIEEADRDRDGEVNAEEFIRMMKRTAYGY 169
[Close]
BLAST of Spo11208.1 vs. NCBI nr
Match: gi|590704747|ref|XP_007047245.1| (Centrin2 isoform 1 [Theobroma cacao])

HSP 1 Score: 282.0 bits (720), Expect = 7.000e-73
Identity = 140/160 (87.50%), Postives = 153/160 (95.62%), Query Frame = 1 

		  

Query: 7   RKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMSALGFEMTEEQINQMI 66
           RKDKPRGRHHGL+QQKRQEIKEAFELFDTDGSGTIDAKELNVAM ALGFEMTEEQINQMI
Sbjct: 10  RKDKPRGRHHGLSQQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMI 69

Query: 67  ADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPVDIQRIAKEL 126
           ADVDKDGSGAIDFDEF HMMTAKIGERDTKEELMKAF+IIDQDNNGKISP DI+ IAKEL
Sbjct: 70  ADVDKDGSGAIDFDEFVHMMTAKIGERDTKEELMKAFQIIDQDNNGKISPQDIKHIAKEL 129

Query: 127 GENLTDREIQEMIEEADRDRDGEVNVEEFLRMMKRTSYAY 167
           GE+ +++EIQ+MIEEADRD DGEV+++EF+RMMKRT+Y Y
Sbjct: 130 GEHFSEKEIQDMIEEADRDHDGEVSIDEFMRMMKRTTYGY 169
[Close]
BLAST of Spo11208.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CK10_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g078340 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.400e-83
Identity = 161/166 (96.99%), Postives = 163/166 (98.19%), Query Frame = 1 

		  

Query: 1   SSARTVRKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMSALGFEMTEE 60
           SSARTVRKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAM ALGFEMTEE
Sbjct: 2   SSARTVRKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 61

Query: 61  QINQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPVDIQ 120
           QINQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISP DIQ
Sbjct: 62  QINQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPADIQ 121

Query: 121 RIAKELGENLTDREIQEMIEEADRDRDGEVNVEEFLRMMKRTSYAY 167
           RIAK+LGEN TDR+IQEMIEEADRDRDGEVNVEEFLRMMKRTSYAY
Sbjct: 122 RIAKDLGENFTDRDIQEMIEEADRDRDGEVNVEEFLRMMKRTSYAY 167
[Close]
BLAST of Spo11208.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CPS5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g078340 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.400e-83
Identity = 161/166 (96.99%), Postives = 163/166 (98.19%), Query Frame = 1 

		  

Query: 1   SSARTVRKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMSALGFEMTEE 60
           SSARTVRKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAM ALGFEMTEE
Sbjct: 3   SSARTVRKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 62

Query: 61  QINQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPVDIQ 120
           QINQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISP DIQ
Sbjct: 63  QINQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPADIQ 122

Query: 121 RIAKELGENLTDREIQEMIEEADRDRDGEVNVEEFLRMMKRTSYAY 167
           RIAK+LGEN TDR+IQEMIEEADRDRDGEVNVEEFLRMMKRTSYAY
Sbjct: 123 RIAKDLGENFTDRDIQEMIEEADRDRDGEVNVEEFLRMMKRTSYAY 168
[Close]
BLAST of Spo11208.1 vs. UniProtKB/TrEMBL
Match: A0A061DGX6_THECC (Centrin2 isoform 1 OS=Theobroma cacao GN=TCM_000608 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 4.800e-73
Identity = 140/160 (87.50%), Postives = 153/160 (95.62%), Query Frame = 1 

		  

Query: 7   RKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMSALGFEMTEEQINQMI 66
           RKDKPRGRHHGL+QQKRQEIKEAFELFDTDGSGTIDAKELNVAM ALGFEMTEEQINQMI
Sbjct: 10  RKDKPRGRHHGLSQQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMI 69

Query: 67  ADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPVDIQRIAKEL 126
           ADVDKDGSGAIDFDEF HMMTAKIGERDTKEELMKAF+IIDQDNNGKISP DI+ IAKEL
Sbjct: 70  ADVDKDGSGAIDFDEFVHMMTAKIGERDTKEELMKAFQIIDQDNNGKISPQDIKHIAKEL 129

Query: 127 GENLTDREIQEMIEEADRDRDGEVNVEEFLRMMKRTSYAY 167
           GE+ +++EIQ+MIEEADRD DGEV+++EF+RMMKRT+Y Y
Sbjct: 130 GEHFSEKEIQDMIEEADRDHDGEVSIDEFMRMMKRTTYGY 169
[Close]
BLAST of Spo11208.1 vs. UniProtKB/TrEMBL
Match: M5VRD0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012454mg PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.400e-72
Identity = 141/160 (88.12%), Postives = 149/160 (93.12%), Query Frame = 1 

		  

Query: 7   RKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMSALGFEMTEEQINQMI 66
           RK+KPRGRHHGL  QK+QEIKEAFELFDTDGSGTIDAKELNVAM ALGFEMTEEQI QMI
Sbjct: 10  RKEKPRGRHHGLPTQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQITQMI 69

Query: 67  ADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPVDIQRIAKEL 126
           ADVDKDGSGAIDFDEF HMMTAKIGERDTKEELMKAF +IDQDNNGKIS  DI+ IAK+L
Sbjct: 70  ADVDKDGSGAIDFDEFVHMMTAKIGERDTKEELMKAFHLIDQDNNGKISAADIKNIAKDL 129

Query: 127 GENLTDREIQEMIEEADRDRDGEVNVEEFLRMMKRTSYAY 167
           GENL+DREIQEMIEEADRDRDGEVN EEF+RMMKRT+Y Y
Sbjct: 130 GENLSDREIQEMIEEADRDRDGEVNAEEFIRMMKRTAYGY 169
[Close]
BLAST of Spo11208.1 vs. UniProtKB/TrEMBL
Match: B9SC54_RICCO (Caltractin, putative OS=Ricinus communis GN=RCOM_1407570 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.200e-71
Identity = 142/161 (88.20%), Postives = 150/161 (93.17%), Query Frame = 1 

		  

Query: 7   RKD-KPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMSALGFEMTEEQINQM 66
           RKD KPRGRHHGL+QQK+QEIKEAFELFDTDGSGTIDAKELNVAM ALGFEMTEEQI QM
Sbjct: 10  RKDIKPRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQITQM 69

Query: 67  IADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPVDIQRIAKE 126
           IADVDKDGSGAIDFDEF HMMTAKIGERDTKEELMKAFRIIDQDNNGKIS  DI+RI K+
Sbjct: 70  IADVDKDGSGAIDFDEFVHMMTAKIGERDTKEELMKAFRIIDQDNNGKISVDDIKRIVKD 129

Query: 127 LGENLTDREIQEMIEEADRDRDGEVNVEEFLRMMKRTSYAY 167
           LGEN TDREI+EM+EEADRD DGEV VEEF+RMMKRT+Y Y
Sbjct: 130 LGENFTDREIREMVEEADRDHDGEVGVEEFMRMMKRTTYGY 170
[Close]
BLAST of Spo11208.1 vs. ExPASy Swiss-Prot
Match: CATR_ATRNU (Caltractin OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 5.100e-84
Identity = 159/166 (95.78%), Postives = 162/166 (97.59%), Query Frame = 1 

		  

Query: 1   SSARTVRKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMSALGFEMTEE 60
           SSARTVRKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAM ALGFEMTEE
Sbjct: 2   SSARTVRKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEE 61

Query: 61  QINQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPVDIQ 120
           QINQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISP DIQ
Sbjct: 62  QINQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPEDIQ 121

Query: 121 RIAKELGENLTDREIQEMIEEADRDRDGEVNVEEFLRMMKRTSYAY 167
           RIAKELGEN T ++IQ+MIEEADRDRDGEVNVEEFLRMMKRTSYAY
Sbjct: 122 RIAKELGENFTVKDIQDMIEEADRDRDGEVNVEEFLRMMKRTSYAY 167
[Close]
BLAST of Spo11208.1 vs. ExPASy Swiss-Prot
Match: CML20_ARATH (Probable calcium-binding protein CML20 OS=Arabidopsis thaliana GN=CML20 PE=1 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 7.200e-70
Identity = 137/162 (84.57%), Postives = 151/162 (93.21%), Query Frame = 1 

		  

Query: 4   RTV-RKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMSALGFEMTEEQI 63
           RTV RK+KPR RHHGLT QK+QEIKEAFELFDTDGSGTIDAKELNVAM ALGFEMTEEQI
Sbjct: 6   RTVSRKEKPR-RHHGLTTQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQI 65

Query: 64  NQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPVDIQRI 123
           N+MIADVDKDGSGAIDFDEF HMMTAKIGERDTKEEL KAF+IID D NGKISP DI+R+
Sbjct: 66  NKMIADVDKDGSGAIDFDEFVHMMTAKIGERDTKEELTKAFQIIDLDKNGKISPDDIKRM 125

Query: 124 AKELGENLTDREIQEMIEEADRDRDGEVNVEEFLRMMKRTSY 165
           AK+LGEN TD EI+EM+EEADRDRDGEVN++EF+RMM+RT+Y
Sbjct: 126 AKDLGENFTDAEIREMVEEADRDRDGEVNMDEFMRMMRRTAY 166
[Close]
BLAST of Spo11208.1 vs. ExPASy Swiss-Prot
Match: CML13_ORYSJ (Probable calcium-binding protein CML13 OS=Oryza sativa subsp. japonica GN=CML13 PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 6.300e-66
Identity = 128/161 (79.50%), Postives = 146/161 (90.68%), Query Frame = 1 

		  

Query: 7   RKDKPRG-RHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMSALGFEMTEEQINQM 66
           R+++PRG R HGLT+QKRQEIKEAF+LFDTD SGTIDAKELNVAM ALGFEMTEEQINQM
Sbjct: 9   RRERPRGARPHGLTKQKRQEIKEAFDLFDTDNSGTIDAKELNVAMRALGFEMTEEQINQM 68

Query: 67  IADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPVDIQRIAKE 126
           IADVDKDGSG+ID++EF HMMTAKIGERD+KEEL KAF IIDQD NGKIS VDIQRIAKE
Sbjct: 69  IADVDKDGSGSIDYEEFEHMMTAKIGERDSKEELTKAFSIIDQDKNGKISDVDIQRIAKE 128

Query: 127 LGENLTDREIQEMIEEADRDRDGEVNVEEFLRMMKRTSYAY 167
           LGEN T +EIQEM++EADR+ DGE++ +EF+RMM+RT Y Y
Sbjct: 129 LGENFTYQEIQEMVQEADRNGDGEIDFDEFIRMMRRTGYGY 169
[Close]
BLAST of Spo11208.1 vs. ExPASy Swiss-Prot
Match: CML19_ARATH (Calcium-binding protein CML19 OS=Arabidopsis thaliana GN=CML19 PE=1 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 3.300e-59
Identity = 114/163 (69.94%), Postives = 140/163 (85.89%), Query Frame = 1 

		  

Query: 2   SARTVRKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMSALGFEMTEEQ 61
           +A+  R  KP+G+ +GLT QKR+EI+E F+LFD DGSG+IDA ELNVAM +LGFEM  +Q
Sbjct: 4   AAQLRRGLKPKGKTYGLTNQKRREIREIFDLFDIDGSGSIDASELNVAMRSLGFEMNNQQ 63

Query: 62  INQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPVDIQR 121
           IN+++A+VDK+ SGAIDFDEF HMMT K GERD+ +EL KAF+IID DNNGKISP DI+ 
Sbjct: 64  INELMAEVDKNQSGAIDFDEFVHMMTTKFGERDSIDELSKAFKIIDHDNNGKISPRDIKM 123

Query: 122 IAKELGENLTDREIQEMIEEADRDRDGEVNVEEFLRMMKRTSY 165
           IAKELGEN TD +I+EMIEEADRD+DGEVN+EEF++MMKRTSY
Sbjct: 124 IAKELGENFTDNDIEEMIEEADRDKDGEVNLEEFMKMMKRTSY 166
[Close]
BLAST of Spo11208.1 vs. ExPASy Swiss-Prot
Match: CATR_SCHDU (Caltractin OS=Scherffelia dubia PE=1 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.200e-56
Identity = 109/161 (67.70%), Postives = 137/161 (85.09%), Query Frame = 1 

		  

Query: 3   ARTVRKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMSALGFEMTEEQI 62
           A + R+DK + R  GLT++++QEI+EAF+LFDTDGSGTIDAKEL VAM ALGFE  +E+I
Sbjct: 6   AASARRDKAKTRSAGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEI 65

Query: 63  NQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPVDIQRI 122
            +MIAD+DKDGSG IDF+EF  MMTAK+GERD++EE+MKAFR+ D D  GKIS  +++R+
Sbjct: 66  KKMIADIDKDGSGTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRV 125

Query: 123 AKELGENLTDREIQEMIEEADRDRDGEVNVEEFLRMMKRTS 164
           AKELGEN+TD E+QEMI+EADRD DGEVN EEF R+MK+TS
Sbjct: 126 AKELGENMTDEELQEMIDEADRDGDGEVNEEEFFRIMKKTS 166
[Close]
BLAST of Spo11208.1 vs. TAIR (Arabidopsis)
Match: AT3G50360.1 (centrin2)

HSP 1 Score: 264.6 bits (675), Expect = 4.100e-71
Identity = 137/162 (84.57%), Postives = 151/162 (93.21%), Query Frame = 1 

		  

Query: 4   RTV-RKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMSALGFEMTEEQI 63
           RTV RK+KPR RHHGLT QK+QEIKEAFELFDTDGSGTIDAKELNVAM ALGFEMTEEQI
Sbjct: 6   RTVSRKEKPR-RHHGLTTQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQI 65

Query: 64  NQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPVDIQRI 123
           N+MIADVDKDGSGAIDFDEF HMMTAKIGERDTKEEL KAF+IID D NGKISP DI+R+
Sbjct: 66  NKMIADVDKDGSGAIDFDEFVHMMTAKIGERDTKEELTKAFQIIDLDKNGKISPDDIKRM 125

Query: 124 AKELGENLTDREIQEMIEEADRDRDGEVNVEEFLRMMKRTSY 165
           AK+LGEN TD EI+EM+EEADRDRDGEVN++EF+RMM+RT+Y
Sbjct: 126 AKDLGENFTDAEIREMVEEADRDRDGEVNMDEFMRMMRRTAY 166
[Close]
BLAST of Spo11208.1 vs. TAIR (Arabidopsis)
Match: AT4G37010.2 (centrin 2)

HSP 1 Score: 229.2 bits (583), Expect = 1.900e-60
Identity = 114/163 (69.94%), Postives = 140/163 (85.89%), Query Frame = 1 

		  

Query: 2   SARTVRKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMSALGFEMTEEQ 61
           +A+  R  KP+G+ +GLT QKR+EI+E F+LFD DGSG+IDA ELNVAM +LGFEM  +Q
Sbjct: 8   AAQLRRGLKPKGKTYGLTNQKRREIREIFDLFDIDGSGSIDASELNVAMRSLGFEMNNQQ 67

Query: 62  INQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPVDIQR 121
           IN+++A+VDK+ SGAIDFDEF HMMT K GERD+ +EL KAF+IID DNNGKISP DI+ 
Sbjct: 68  INELMAEVDKNQSGAIDFDEFVHMMTTKFGERDSIDELSKAFKIIDHDNNGKISPRDIKM 127

Query: 122 IAKELGENLTDREIQEMIEEADRDRDGEVNVEEFLRMMKRTSY 165
           IAKELGEN TD +I+EMIEEADRD+DGEVN+EEF++MMKRTSY
Sbjct: 128 IAKELGENFTDNDIEEMIEEADRDKDGEVNLEEFMKMMKRTSY 170
[Close]
BLAST of Spo11208.1 vs. TAIR (Arabidopsis)
Match: AT2G27030.3 (calmodulin 5)

HSP 1 Score: 142.5 bits (358), Expect = 2.300e-34
Identity = 70/142 (49.30%), Postives = 96/142 (67.61%), Query Frame = 1 

		  

Query: 18  LTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMSALGFEMTEEQINQMIADVDKDGSGAI 77
           LT  +  E KEAF LFD DG G I  KEL   M +LG   TE ++  MI +VD DG+G I
Sbjct: 5   LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64

Query: 78  DFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPVDIQRIAKELGENLTDREIQE 137
           DF EF ++M  K+ + D++EEL +AFR+ D+D NG IS  +++ +   LGE LTD E+ E
Sbjct: 65  DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124

Query: 138 MIEEADRDRDGEVNVEEFLRMM 160
           MI+EAD D DG++N EEF+++M
Sbjct: 125 MIKEADVDGDGQINYEEFVKVM 146
[Close]
BLAST of Spo11208.1 vs. TAIR (Arabidopsis)
Match: AT3G56800.1 (calmodulin 3)

HSP 1 Score: 142.5 bits (358), Expect = 2.300e-34
Identity = 70/142 (49.30%), Postives = 96/142 (67.61%), Query Frame = 1 

		  

Query: 18  LTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMSALGFEMTEEQINQMIADVDKDGSGAI 77
           LT  +  E KEAF LFD DG G I  KEL   M +LG   TE ++  MI +VD DG+G I
Sbjct: 5   LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64

Query: 78  DFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPVDIQRIAKELGENLTDREIQE 137
           DF EF ++M  K+ + D++EEL +AFR+ D+D NG IS  +++ +   LGE LTD E+ E
Sbjct: 65  DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124

Query: 138 MIEEADRDRDGEVNVEEFLRMM 160
           MI+EAD D DG++N EEF+++M
Sbjct: 125 MIKEADVDGDGQINYEEFVKVM 146
[Close]
BLAST of Spo11208.1 vs. TAIR (Arabidopsis)
Match: AT3G43810.1 (calmodulin 7)

HSP 1 Score: 142.1 bits (357), Expect = 3.000e-34
Identity = 70/142 (49.30%), Postives = 95/142 (66.90%), Query Frame = 1 

		  

Query: 18  LTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMSALGFEMTEEQINQMIADVDKDGSGAI 77
           LT  +  E KEAF LFD DG G I  KEL   M +LG   TE ++  MI +VD DG+G I
Sbjct: 5   LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64

Query: 78  DFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPVDIQRIAKELGENLTDREIQE 137
           DF EF ++M  K+ + D++EEL +AFR+ D+D NG IS  +++ +   LGE LTD E+ E
Sbjct: 65  DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124

Query: 138 MIEEADRDRDGEVNVEEFLRMM 160
           MI EAD D DG++N EEF+++M
Sbjct: 125 MIREADVDGDGQINYEEFVKVM 146
The following BLAST results are available for this feature:
BLAST of Spo11208.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|731327145|ref|XP_010674374.1|2.0e-8396.9PREDICTED: caltractin isoform ... [more]
gi|731327143|ref|XP_010674373.1|2.0e-8396.9PREDICTED: caltractin isoform ... [more]
gi|729051|sp|P41210.1|CATR_ATRNU8.2e-8295.7RecName: Full=Caltractin; AltN... [more]
gi|694401292|ref|XP_009375705.1|1.4e-7389.3PREDICTED: probable calcium-bi... [more]
gi|590704747|ref|XP_007047245.1|7.0e-7387.5Centrin2 isoform 1 [Theobroma ... [more]
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BLAST of Spo11208.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0J8CK10_BETVU1.4e-8396.9Uncharacterized protein OS=Bet... [more]
A0A0J8CPS5_BETVU1.4e-8396.9Uncharacterized protein OS=Bet... [more]
A0A061DGX6_THECC4.8e-7387.5Centrin2 isoform 1 OS=Theobrom... [more]
M5VRD0_PRUPE1.4e-7288.1Uncharacterized protein OS=Pru... [more]
B9SC54_RICCO1.2e-7188.2Caltractin, putative OS=Ricinu... [more]
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BLAST of Spo11208.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CATR_ATRNU5.1e-8495.7Caltractin OS=Atriplex nummula... [more]
CML20_ARATH7.2e-7084.5Probable calcium-binding prote... [more]
CML13_ORYSJ6.3e-6679.5Probable calcium-binding prote... [more]
CML19_ARATH3.3e-5969.9Calcium-binding protein CML19 ... [more]
CATR_SCHDU1.2e-5667.7Caltractin OS=Scherffelia dubi... [more]
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BLAST of Spo11208.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT3G50360.14.1e-7184.5centrin2[more]
AT4G37010.21.9e-6069.9centrin 2[more]
AT2G27030.32.3e-3449.3calmodulin 5[more]
AT3G56800.12.3e-3449.3calmodulin 3[more]
AT3G43810.13.0e-3449.3calmodulin 7[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 97..160
score: 2.2E-14coord: 24..86
score: 5.2
IPR002048EF-hand domainSMARTSM00054efh_1coord: 25..53
score: 4.6E-8coord: 98..126
score: 0.0012coord: 61..89
score: 2.6E-8coord: 134..162
score: 4.
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 130..165
score: 13.649coord: 94..129
score: 13.704coord: 57..92
score: 14.681coord: 21..56
score: 16
IPR011992EF-hand domain pairGENE3D1.10.238.10coord: 13..161
score: 1.4
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 15..161
score: 3.59
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 143..155
score: -coord: 70..82
score: -coord: 34..46
score: -coord: 107..119
scor
NoneNo IPR availablePANTHERPTHR23050CALCIUM BINDING PROTEINcoord: 1..164
score: 2.8

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051301 cell division
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0009987 cellular process
biological_process GO:0032259 methylation
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0000023 maltose metabolic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0019760 glucosinolate metabolic process
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0006508 proteolysis
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0042631 cellular response to water deprivation
biological_process GO:0006749 glutathione metabolic process
biological_process GO:0009407 toxin catabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0098655 cation transmembrane transport
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0048767 root hair elongation
cellular_component GO:0005576 extracellular region
cellular_component GO:0009507 chloroplast
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005768 endosome
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0005815 microtubule organizing center
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016020 membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004185 serine-type carboxypeptidase activity
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003935 GTP cyclohydrolase II activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
molecular_function GO:0008324 cation transmembrane transporter activity
molecular_function GO:0005515 protein binding
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0032440 2-alkenal reductase [NAD(P)] activity
molecular_function GO:0004602 glutathione peroxidase activity
RNA-Seq Expression