Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGGGTGGTGCCGTGGTGGTAGTGACTAGCTTACGAGTCACGATCCCTCCCCCCACTCTCCTCATCACTTCTCTCTCTACTTTCTCTCTCCTCACTTTCAGAAAAACAAAAAAAGCGCTGAAAAAGAAATCAATCAATCATTCAATGTTACAATTCCACTCGTCAATAAATTTATTCAATCCCTACATTTAATTATTCCTCTTCAAATTCTTCTCGATTTTTTCATCAGATTCAAAATAGTTAGTATGATTTCTCATAATTGATTCAATTAAACCCTAATTTTCAACCATTGTTGAATTTTCCCAAGCTCAATTTTCAGTCAAAAATGGCGCAAACAGAAGTATACGCGCCGAAATCAGGTCAGCTATGGAAGACGGTGATGAACTGGTTAGCGTTCTTGTTCCAGATCTTTGTTCAGATCATTCGAGGTACTCCTTCCATGTCGCAAGTCTTCAATAACATAGGTTTCAGCCATGGCGGACAGACTTCTTTTCTCTCTCCTCCAACTTCTAATTCTTCTACTACCGGTTTTAAGCCTCTCCCTGTTGTTGAGATTCCTCTTCACGCTTCCGCTGCTACTGCCGTCGATATCAATGCTGCTGATGGTGGTGAGGCTGGTGATGCTCCCAGTGTTCGTCTTTCGGGCAAGCTCACTGTATGTGTTGTCATTGTTATTCTAATTTTAGTGGGATTTTAGTGTTTTGAAATGATTTGAAAATTCGTGGATTGAAGTAAGTTTGTTGTAGGTGTGTGAATTCTTTGTAATTATAGCATCCGTTCTATGCTTAGAGTAAAACGTTTTAGAATTTTTTTAGGGGGAGGGATGGGAGACCAGGAGCCACCAGGGAGATGATGTAGCCGAGATTTGATCTGGGATTCCGGGATTATGGGTACGACAACCACCTCCACACGAACTCTACTAACTAAGCTAGCGGATGTACACCCGTTCTATATGATTGGTAAAAGTGAGCTCATTGGGTGATGATTATTGATGAGATTTTAGAATGTCCGAATTGGTTGAGTGTAGTTTGATGATTAGATGTAGAGAGAGTGGGTTGATGAATAGATGAAAAGAATTAACCCTTTTTTCCGTATGGTGGGTCCGGGGATATTTTTCGTTTTTTTACCTCATTGATTGAGGAGCAGGTTTTTGGATGATGTTAAATTTGGTGTTGGAACATGATTATGCTTGATGCAATAATTTTGAAGTCCTGTGAATGGTGCTGGTTTGTTGGTTTCGAGGCTTGGATTAGTTTCAATTAGATTGTGGGAAAGTAGAGAAAAAGGTAATGTCAAGATTTAGGCTTTGAGATAGAATTTGACTTTGATTCTCGTTGTAGTTTGATGAGTTTCGTACTTGTGAGCTGAATTCAGAGGAGAGGTGTTTTGGTATTGAACATTTTGTGATAGTTTTTGCAGACTCTTCAGGTTGAGTGAGGGGGTCGCATTTTTTTTTTTTAATTGTTACGCTTTAAAAACAAACGAGCTTTGCTGTTTCTAGTGGCACATTTTTACTAACTAGTTGCAATGTTATAGTTGTACGTTGTGGGTTTCATGTTGAATTTGTTGGAATGTTTGTGGGGGATATTATGGTCCTAGAGTTTTAGCTGGATAATGTGGGTTTCCTTTTATTTTTTATTTTTTATGAAGGTGTCGAGTTAGCTTCTAGCATCAGAGTCTGTTATTGTGGAGAATCAAATATAATGATGTCAGACTTACAATGCGTTAGTGTTTGAGATTGATGAAGTTGCATTTATTATATTCCATATTGGAGGAGACTTGTTGATTTTCTCATTCTTGAGCATTTGAAATTGGGTTTTATTGGCATGAAAATGATATTGGAGTGGTTCTTGTGATGAGCACCAGACGATGGGATCCTATAGTTGGATACTGTATCAAGTTCAGAATTTTTTAGATTTAGAGGGGCTTTTTCTTGATCCAAGCAGGATATCTTTTTAAATTTGAAATTTTGGGAAATTGGCTGAGAAGTCCAAAGTACAACAGTTTCTAACTTTTCCGCAAGATTCCTTAGTGCCTAGTGCATATTGATTATGATTTGTGTGAAATTGGATGATGTTGATGGCTTTCAGTGATCGAGTGTTTCTCCATAAGCCAACCATTGTACCGTCATCTTTTTGTCATTGGTATTTTTTTTTGGAAATCAAGGTCTGGTTCTAAATACTTTGATCTGCAAACTTTAGGTCAAATTAATGAACTGAAAATTTGGATAATTGAGGATTTAGTTTAGGGATATAGTCAAGTTTCCTGCCTAGCAGTGATTGCTCTGATCACTGGTTTCTTAACTGGTTAACTCCAATGATACTGTGATATGGACAAATTTGAATACCAGAGGAACTTTTTTTTAATAATGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGTTAGTTTGGGATATGGACAAGTTTCCAGTTTCCCAGTGGTATGGACAAATTTGAATAAGTGAGGATTTATTTTGGGATACGGACAAGTTTCCGAATTTGAATAATTGATGATCTACTCCGTAGTTTAAGAGTATAGGTTCAATCTTCCTGTATAATTTGATGTAAGGTATTGAATGGCCTTCTCTGTTTATTGCACCAGACATGCACATTTTTGCAATTTTTTACTTTATTTTCATCATGAAGTTTCTACTTAATGACCTCCTCGTAACAGTGGATCTTTGTTATAACCTTGCAGGTTGTACTTGATCTGGATGAAACACTAGTATGTGCATATGAGACCTCTAGTTTACCACCAACACTTTGTACACAGGCGACAGAAGCAGGTCTGGATTGGTTTGAGCTGGAATGTGTATCGTCAGATAAGGTATCAAGTTTTCCCAATTTCATCAATTATCGCGTGCTTTCCGAATGAAACATGATTTGTATATCTCAAATTGAAGGAATGCGAAGGGAAGCCCAAAATCAGTTATGTGACAGTGTTTGAACGTCCTGGGTTAAATGAATTCTTGGAGCAACTTAGTGAATTTGCAGATTTGATTCTTTTCACGGCTGGTCTAGAAGGTTCACATTTTTCTTCGGATCTTTTCATACTTTACAGCATCATGCTCAAATTTATTTTGCTTGTTTATGTTGTTTTTTGCACAAGTGTTTAAGAAACTTTTAAAGGAAAAAGCTAGAGAAGTTTCTCTAAATCATACATGTGAGTATGTTATTGTGTTTTGCACTTTTGCTATAATGCTACTATAACAGTTGCTGTATTTATTTTTTGAACAGGTTATGCTAGACCTCTTGTTGACAGAATTGATGTCGACAATCGGTTCAGTCGTCGCCTGTATCGGCCATCGACTACTAGCACGTTAGTATTCTAAAACTTAGGACTTTCTCTTTTCTCCTGTTAGCATACATTAATGTTTAGATTGTGAGCATTGTTTTTTTACAATTCAAGTTTAGGTCCCATAATTGACTGTCTGAATAGAACATAGTGTTATAATACATTGATAGTTGCATGTTGAACTCTTGTTTTGGGTAGTTACCACTGATTTTGTTTTGCAAAAATGTCCTAAAAGTATCCAAAATTCACCTAGGTGCTCAAACATGCATGTTGACTTGGTCTGTTTCATGCACAGGTGAAAGATGACAAGTGACTACTATTTTAGCCTCAGTACCTGAATGTGCTTTCCGTTTTATTTTATTTTTTTGTTGTGTAGTAGCCTAGTTGCACTTTTAGAACAATATCAAAGGGATGGATTTGTGTAACCACTGATACAAATTAAGATGGCATCTTACGAATCGTGCTCAATATCTTACAGAATAGATAAAGCATACCAATCAAAACCAATAAGTTAGGCCATCATTACCAATCCAAAGAAACCATTCCAAAAGGTGGAGAAATTGAGTAAACAAAGAGAAGTTTGAGCTTTATAATTGCATCGCTGGAAGTTTGAGTAAACAAAGAGAAGTTTGAGCTTTATAATTGCATCGCTGGAAGTTGACTGACTGACTGTGATAACTCAAATATGGAGAGTCATTTATCAATAATTTTGCCAGTTGGTCATCTGTCATTTGTTTGCAATTTACATAAATTACTTCATGTGATCTTCCTAATATATCTTCACAAAACATTTATGTTTTTTCGTCAATGTAAATTGCCAGTAATACCCAATAGGACCAATATCCACATTTCCCAAGGATCAAGGCCGGCAGCAAAAATTAGTGAAAAAAAGAAAACAATGATATGCTATTGGCGATGTGTTATCTTGGACATTTGCATTGGACATTTCATGGAAAATCATACACACCAATACATTCTCTTAGTTAATTACCTTGCATCTAAATTGGAGATGTATCATATGATGAGCAAATTAGTGGTATATCGCTCGAATTGGAGGTTCTCTATGTCCCTTGCTTCTTTTTAGGGTACAAGTTACAGAGAGAAATAGTAAAGACTTGGTTTAATTTACTTGTTGCATGCTTATGATATGATATAGGAAATTTACGCCACCACTTACCCAAAATTATGGTACGTGAACAAAACAGACAAGATTGCCCACATTCATGTGTAGTCAGGTAGATACTTGTGATGTATATGTTTAAAGGGAATAACTGGAGTTTTTATAAGTAATTGACTAATTCTCATCTGCTTCTTTGATATCTCCTGTCCTTTTGTCGCGGGGAAGTGTTGTTAAAGGATGTTTCTTTTTGAATACTTTCTCTGTGAGCATGTCAGTTGTATACTGTTATTATCTTGATATGTTCTAGGGCCATCCTTGTTTTTAACGTTTTAGAACGACATTGTTTATGTTTATGCTCTATCTTAAAAAATGGGCGATACTAATTGTTTGTTTTAATCTTTATTTATTCAAGTATTCCTTACCCGCTCCCTCTTGCTGGCAGATTTGCGGAATGAAATTCCCCCCTGCATATACTGGTAGCTAAATTGTACTTCCTTTTGGTGATCGGTGTTGGGAAGGTTTCCCGCGCTAAATGAATGCATTAGTTATGCCAGGCACTGCCTTTGGCAAAAGGTTTAGTAGCTGGTTTCTTATACTTGTGGATGAGCTATGATTTCTGTCAAGACTTGTATTTTTCTTGAATGTGAGATGGAATTTGCATAATTTAGATGGGATCATGCCGTAGGCTGTGTGTGAATCTGATTTAACATCATTTTTGTTAGGTTTTCTGATGTTATTAAGCAGTATCTTACATATCTGATGCCTTTTTTGGTTAAGTTGCGCCTAATGTTATTCAATTCCGTGATTTCTCTGACTTGCAACATTTTAAACTTAGCTGTTTTGTGCTCTCTAACTTGGGTATATGTACAGGGAGTATCGGGATCATGTGAAGGATCTATCCTGCATCTCACCGGATCTAGGCAGAGTAGTTATTGTTGACAACAATCCATTCAGTTTCCTATTGCAGCCACTAAATGGGATTCCATGTGTACCGTTTTCTGCAGGACAGCCACATGATGATCAGGTAACTGAAGTTACAAAGTAACTAAAAGAAATAGGGTGATTCCAAATCAATTACTGTTACTGATTAATAGTACAAATCACATGGCAAAATCGTAAATAAATAAACTTTCAACATATACATTTAACTTCAATTTTTCATTTAAGCTCACATTTTATTCAGTTAACTTCAAATTATATTATGTTAACCTCAAATTTTATTTATTTAATTCCCTTAATTCTTTTCTTTTTGTTGTTTACACCTTTTTTTTAAAAGTTTTCCTACCGATTTAATTACGTAAATGCCATGTTATTTGCACTATTCACTAATAACAATTATTGATATATACTTTTCCGAAAGGAATATTAAAAAATCCACCCCATCCTTCGCTTGATTTATCTTCTCTTCGTTTCTTTCAGCTTCTTGAAGTCTTACTTCCGCTCCTGAAGCACCTCTCGCTTCAGGATGATGTTAGGCCTGCCTTGTATGAAAAATTCCATATGCCGGAGTGGTTCCAAAAGCACGGAATCCCTTCCTCTAGTTGGACATCGTAGTGGCAGCCTGAAAGAGGATTATTCTTTGGCAGGTGATTTATGCATTTTGGAAACATGTATTCATTAAACTTGTATAGTGAAACTCTAAGAAGGGGCCATTTATCTGATTCTAAAATCACTCCACCCCCCAACGAAATTTCAATGCTACAATTGTGATCAAAATTTAATTTTTTTTCTTTTCCTTTTCTGTATGTAGCTTGATTGGAGATTAGATTCTTCTGTAACTTTGTATGCCTTTAGGGTTTTCCTTGTAGTCTTGTAAACCTTGTATGTATGCTCATTTTTCAGCTAATAAATATATGCAGTTTCAGCTTTTTGGGTTCATGAAAA CGGGTGGTGCCGTGGTGGTAGTGACTAGCTTACGAGTCACGATCCCTCCCCCCACTCTCCTCATCACTTCTCTCTCTACTTTCTCTCTCCTCACTTTCAGAAAAACAAAAAAAGCGCTGAAAAAGAAATCAATCAATCATTCAATGTTACAATTCCACTCGTCAATAAATTTATTCAATCCCTACATTTAATTATTCCTCTTCAAATTCTTCTCGATTTTTTCATCAGATTCAAAATAGTTAGTATGATTTCTCATAATTGATTCAATTAAACCCTAATTTTCAACCATTGTTGAATTTTCCCAAGCTCAATTTTCAGTCAAAAATGGCGCAAACAGAAGTATACGCGCCGAAATCAGGTCAGCTATGGAAGACGGTGATGAACTGGTTAGCGTTCTTGTTCCAGATCTTTGTTCAGATCATTCGAGGTACTCCTTCCATGTCGCAAGTCTTCAATAACATAGGTTTCAGCCATGGCGGACAGACTTCTTTTCTCTCTCCTCCAACTTCTAATTCTTCTACTACCGGTTTTAAGCCTCTCCCTGTTGTTGAGATTCCTCTTCACGCTTCCGCTGCTACTGCCGTCGATATCAATGCTGCTGATGGTGGTGAGGCTGGTGATGCTCCCAGTGTTCGTCTTTCGGGCAAGCTCACTGTTGTACTTGATCTGGATGAAACACTAGTATGTGCATATGAGACCTCTAGTTTACCACCAACACTTTGTACACAGGCGACAGAAGCAGGTCTGGATTGGTTTGAGCTGGAATGTGTATCGTCAGATAAGGAATGCGAAGGGAAGCCCAAAATCAGTTATGTGACAGTGTTTGAACGTCCTGGGTTAAATGAATTCTTGGAGCAACTTAGTGAATTTGCAGATTTGATTCTTTTCACGGCTGGTCTAGAAGGTTATGCTAGACCTCTTGTTGACAGAATTGATGTCGACAATCGGTTCAGTCGTCGCCTGTATCGGCCATCGACTACTAGCACGGAGTATCGGGATCATGTGAAGGATCTATCCTGCATCTCACCGGATCTAGGCAGAGTAGTTATTGTTGACAACAATCCATTCAGTTTCCTATTGCAGCCACTAAATGGGATTCCATGTGTACCGTTTTCTGCAGGACAGCCACATGATGATCAGCTTCTTGAAGTCTTACTTCCGCTCCTGAAGCACCTCTCGCTTCAGGATGATGTTAGGCCTGCCTTGTATGAAAAATTCCATATGCCGGAGTGGTTCCAAAAGCACGGAATCCCTTCCTCTAGTTGGACATCGTAGTGGCAGCCTGAAAGAGGATTATTCTTTGGCAGGTGATTTATGCATTTTGGAAACATGTATTCATTAAACTTGTATAGTGAAACTCTAAGAAGGGGCCATTTATCTGATTCTAAAATCACTCCACCCCCCAACGAAATTTCAATGCTACAATTGTGATCAAAATTTAATTTTTTTTCTTTTCCTTTTCTGTATGTAGCTTGATTGGAGATTAGATTCTTCTGTAACTTTGTATGCCTTTAGGGTTTTCCTTGTAGTCTTGTAAACCTTGTATGTATGCTCATTTTTCAGCTAATAAATATATGCAGTTTCAGCTTTTTGGGTTCATGAAAA ATGGCGCAAACAGAAGTATACGCGCCGAAATCAGGTCAGCTATGGAAGACGGTGATGAACTGGTTAGCGTTCTTGTTCCAGATCTTTGTTCAGATCATTCGAGGTACTCCTTCCATGTCGCAAGTCTTCAATAACATAGGTTTCAGCCATGGCGGACAGACTTCTTTTCTCTCTCCTCCAACTTCTAATTCTTCTACTACCGGTTTTAAGCCTCTCCCTGTTGTTGAGATTCCTCTTCACGCTTCCGCTGCTACTGCCGTCGATATCAATGCTGCTGATGGTGGTGAGGCTGGTGATGCTCCCAGTGTTCGTCTTTCGGGCAAGCTCACTGTTGTACTTGATCTGGATGAAACACTAGTATGTGCATATGAGACCTCTAGTTTACCACCAACACTTTGTACACAGGCGACAGAAGCAGGTCTGGATTGGTTTGAGCTGGAATGTGTATCGTCAGATAAGGAATGCGAAGGGAAGCCCAAAATCAGTTATGTGACAGTGTTTGAACGTCCTGGGTTAAATGAATTCTTGGAGCAACTTAGTGAATTTGCAGATTTGATTCTTTTCACGGCTGGTCTAGAAGGTTATGCTAGACCTCTTGTTGACAGAATTGATGTCGACAATCGGTTCAGTCGTCGCCTGTATCGGCCATCGACTACTAGCACGGAGTATCGGGATCATGTGAAGGATCTATCCTGCATCTCACCGGATCTAGGCAGAGTAGTTATTGTTGACAACAATCCATTCAGTTTCCTATTGCAGCCACTAAATGGGATTCCATGTGTACCGTTTTCTGCAGGACAGCCACATGATGATCAGCTTCTTGAAGTCTTACTTCCGCTCCTGAAGCACCTCTCGCTTCAGGATGATGTTAGGCCTGCCTTGTATGAAAAATTCCATATGCCGGAGTGGTTCCAAAAGCACGGAATCCCTTCCTCTAGTTGGACATCGTAG MAQTEVYAPKSGQLWKTVMNWLAFLFQIFVQIIRGTPSMSQVFNNIGFSHGGQTSFLSPPTSNSSTTGFKPLPVVEIPLHASAATAVDINAADGGEAGDAPSVRLSGKLTVVLDLDETLVCAYETSSLPPTLCTQATEAGLDWFELECVSSDKECEGKPKISYVTVFERPGLNEFLEQLSEFADLILFTAGLEGYARPLVDRIDVDNRFSRRLYRPSTTSTEYRDHVKDLSCISPDLGRVVIVDNNPFSFLLQPLNGIPCVPFSAGQPHDDQLLEVLLPLLKHLSLQDDVRPALYEKFHMPEWFQKHGIPSSSWTS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo11171.1 vs. NCBI nr
Match: gi|902223942|gb|KNA19645.1| (hypothetical protein SOVF_059350 [Spinacia oleracea]) HSP 1 Score: 644.8 bits (1662), Expect = 7.800e-182 Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 1
BLAST of Spo11171.1 vs. NCBI nr
Match: gi|731315032|ref|XP_010689631.1| (PREDICTED: CTD nuclear envelope phosphatase 1 homolog [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 552.7 bits (1423), Expect = 4.000e-154 Identity = 274/315 (86.98%), Postives = 289/315 (91.75%), Query Frame = 1
BLAST of Spo11171.1 vs. NCBI nr
Match: gi|225448441|ref|XP_002273682.1| (PREDICTED: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 [Vitis vinifera]) HSP 1 Score: 454.1 bits (1167), Expect = 1.900e-124 Identity = 222/315 (70.48%), Postives = 259/315 (82.22%), Query Frame = 1
BLAST of Spo11171.1 vs. NCBI nr
Match: gi|747075716|ref|XP_011084905.1| (PREDICTED: LOW QUALITY PROTEIN: CTD nuclear envelope phosphatase 1 homolog [Sesamum indicum]) HSP 1 Score: 448.4 bits (1152), Expect = 1.100e-122 Identity = 225/316 (71.20%), Postives = 257/316 (81.33%), Query Frame = 1
BLAST of Spo11171.1 vs. NCBI nr
Match: gi|747060523|ref|XP_011076695.1| (PREDICTED: CTD small phosphatase-like protein [Sesamum indicum]) HSP 1 Score: 446.0 bits (1146), Expect = 5.300e-122 Identity = 223/321 (69.47%), Postives = 256/321 (79.75%), Query Frame = 1
BLAST of Spo11171.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RJJ1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_059350 PE=4 SV=1) HSP 1 Score: 644.8 bits (1662), Expect = 5.400e-182 Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 1
BLAST of Spo11171.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D1N9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g023710 PE=4 SV=1) HSP 1 Score: 552.7 bits (1423), Expect = 2.800e-154 Identity = 274/315 (86.98%), Postives = 289/315 (91.75%), Query Frame = 1
BLAST of Spo11171.1 vs. UniProtKB/TrEMBL
Match: D7T4P2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g00940 PE=4 SV=1) HSP 1 Score: 454.1 bits (1167), Expect = 1.400e-124 Identity = 222/315 (70.48%), Postives = 259/315 (82.22%), Query Frame = 1
BLAST of Spo11171.1 vs. UniProtKB/TrEMBL
Match: A0A022PUF8_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a010325mg PE=4 SV=1) HSP 1 Score: 443.0 bits (1138), Expect = 3.100e-121 Identity = 222/324 (68.52%), Postives = 256/324 (79.01%), Query Frame = 1
BLAST of Spo11171.1 vs. UniProtKB/TrEMBL
Match: A0A068V0C9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00039182001 PE=4 SV=1) HSP 1 Score: 441.8 bits (1135), Expect = 7.000e-121 Identity = 224/316 (70.89%), Postives = 260/316 (82.28%), Query Frame = 1
BLAST of Spo11171.1 vs. ExPASy Swiss-Prot
Match: CTSL2_DICDI (CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum GN=ctdspl2 PE=3 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.000e-20 Identity = 71/201 (35.32%), Postives = 111/201 (55.22%), Query Frame = 1
BLAST of Spo11171.1 vs. ExPASy Swiss-Prot
Match: CNEP1_DROME (CTD nuclear envelope phosphatase 1 homolog OS=Drosophila melanogaster GN=Dd PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 9.300e-18 Identity = 61/191 (31.94%), Postives = 98/191 (51.31%), Query Frame = 1
BLAST of Spo11171.1 vs. ExPASy Swiss-Prot
Match: CNEP1_DROPS (CTD nuclear envelope phosphatase 1 homolog OS=Drosophila pseudoobscura pseudoobscura GN=l(1)G0269 PE=3 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 9.300e-18 Identity = 61/191 (31.94%), Postives = 98/191 (51.31%), Query Frame = 1
BLAST of Spo11171.1 vs. ExPASy Swiss-Prot
Match: CTDS1_MOUSE (Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=Mus musculus GN=Ctdsp1 PE=1 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.200e-17 Identity = 65/189 (34.39%), Postives = 92/189 (48.68%), Query Frame = 1
BLAST of Spo11171.1 vs. ExPASy Swiss-Prot
Match: CTDSL_HUMAN (CTD small phosphatase-like protein OS=Homo sapiens GN=CTDSPL PE=1 SV=2) HSP 1 Score: 91.7 bits (226), Expect = 1.600e-17 Identity = 68/189 (35.98%), Postives = 100/189 (52.91%), Query Frame = 1
BLAST of Spo11171.1 vs. TAIR (Arabidopsis)
Match: AT3G55960.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 375.2 bits (962), Expect = 4.100e-104 Identity = 194/310 (62.58%), Postives = 230/310 (74.19%), Query Frame = 1
BLAST of Spo11171.1 vs. TAIR (Arabidopsis)
Match: AT1G29780.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 104.4 bits (259), Expect = 1.300e-22 Identity = 73/188 (38.83%), Postives = 106/188 (56.38%), Query Frame = 1
BLAST of Spo11171.1 vs. TAIR (Arabidopsis)
Match: AT1G29770.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 99.8 bits (247), Expect = 3.300e-21 Identity = 71/192 (36.98%), Postives = 103/192 (53.65%), Query Frame = 1
BLAST of Spo11171.1 vs. TAIR (Arabidopsis)
Match: AT5G45700.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 93.2 bits (230), Expect = 3.100e-19 Identity = 72/196 (36.73%), Postives = 98/196 (50.00%), Query Frame = 1
BLAST of Spo11171.1 vs. TAIR (Arabidopsis)
Match: AT5G11860.1 (SCP1-like small phosphatase 5) HSP 1 Score: 93.2 bits (230), Expect = 3.100e-19 Identity = 71/195 (36.41%), Postives = 107/195 (54.87%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo11171.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo11171.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo11171.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo11171.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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