Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAATGGAGTTTTTCAAAAGAGCCAAGGTGTTTCGGCTAAAATGCAGCCACCATAGCAAGTACCTGACAGCCGATGAAGACGATGAAAGAATCAAACAAAGCCGTGAAAACTCATCCAAAAAAGCCCGTTGGGTCTATGAGGCTGTTGAGGGAAAAGACAATGTCCTCCGTCTCAGGAACAGCTGGAGCCACAGGTACTTAACTGCAACTGATGATCCATTCTTGCTGGGAATGACAGGAAAAAAGGTTATACAGACCATTAGCCAGGGTCCCATATCAGAGTGGGAGCCTATCAAAGATGGATCTTATATCAAACTTAAGAGTCATACAGGTAGTTTTCTAAGAGCCAATCCTAGGGTTCCTCCTTGGAGGAATTCTGTTACCCATGATGAGCCGGGAAATTGGGCCGTTACTGATCACATGATCTTGTGGATCGTTGATATTGTTGAGATTGATTATCAGTCACCTGGCCCGGATGTTGGTGCTTTTACTGGATTAATGGAAGAGGATAGGATCAGCGTTGCTTCTTCCATATCAAGTGATGTACCAGATCACAAACCTATGGTCAGTCATTCTTCTTCTGTGTCAATCAACTATACACTTTACACATGTTTATTTCTGTCAATTGCTTCAATTCCTAGCTGCCTTTTATCTCTACTCTGTTAGGAAACTAACCCAGAAATTAAGTATTATCATCAAAACCAAATTATTTTATCAGGTTTTCAGTTAGGCTAAAATGTTAATGTGTTTGTCCTCCTAACTTCAGCATTCTGGGTTGGAAGTTCAACTTGATGACGCCAAACATGAAGGAAAAAGCTCAGGGATTTCTCTGGAATCTACCTCAAAACACTTTCATGCAGTTGAAGTCGCAATGGCTAAGCAAACTCTTAAAGAACTAAAAGACTTGGATTTCCATGCCATCCTATCTTCAGAAAGAGGCGAAAAGCTGGAAAAAGTCTTAAAGGTGCTTATTGCTGATGCAGAATCCCAAGGCATAATCCCTAGTGAGTTAATCAATTTACAAGAGCATCTTAAGGTGATGAAGAATGAACATGAATCGGCCTCCAAGGATTTGACTGAATATAACAGTTTCTCTAGTAGAAAATTGAAGATAATGGCTCAACTTAAGAAGGATGCTGCTGAAGCTCGTGAGTTAGAGACTCTTCAAGTGGAGTTAGAAATTGCAAGAAACGCAAGAGAGGAGTTGTTGAAACAACTTGAAGAAATTGATAATATCATTAAGGATGTGCAGAAAGCTCAAGCTGATAATTTGGATGATGTTGAAGACCTGATATCAAGAATGGGACAGAAGAGCCAGAAACTTCAGGAGATGAAAATCGAGGAGGAAACATGGCAGCTCAGGAAAACTGAGGCCAACAGAATGCTGGAAAGAGTAGAGGAAGACTGGATCAAGGTTAAATTAATGTTTCCTGATGATTGATCATGCATTTTGGCCTACTGGAAATGGCATATGTACCCAACTTTTTGATACTTCTGAGTTCTCAACGTATTACACCATTCTTTGTTAACAGTTCTGTATCATAGCTGCCATTTGTACATGTTAATAACAAACTACTTCATTCTATTTTCATATGCAACTATGTCTTGAGTGGTAGAGTACATTGTAAATCCAACACGGTTCTGTTTTAATTGAAAGTTTGAAGCATATAAATCAATCTGACTATAACATCAAATAAAATGTCTCGATTATAACTCAACTGTGCCAAATACAGGGGAAGATCTACATCAAAAACGTCTCAGTAATAACAAGGTAAAAAGATTGTATAAGACAAATAGTCAGCACAAAATTGTAAGCAACTGGGA ATGAAAATGGAGTTTTTCAAAAGAGCCAAGGTGTTTCGGCTAAAATGCAGCCACCATAGCAAGTACCTGACAGCCGATGAAGACGATGAAAGAATCAAACAAAGCCGTGAAAACTCATCCAAAAAAGCCCGTTGGGTCTATGAGGCTGTTGAGGGAAAAGACAATGTCCTCCGTCTCAGGAACAGCTGGAGCCACAGGTACTTAACTGCAACTGATGATCCATTCTTGCTGGGAATGACAGGAAAAAAGGTTATACAGACCATTAGCCAGGGTCCCATATCAGAGTGGGAGCCTATCAAAGATGGATCTTATATCAAACTTAAGAGTCATACAGGTAGTTTTCTAAGAGCCAATCCTAGGGTTCCTCCTTGGAGGAATTCTGTTACCCATGATGAGCCGGGAAATTGGGCCGTTACTGATCACATGATCTTGTGGATCGTTGATATTGTTGAGATTGATTATCAGTCACCTGGCCCGGATGTTGGTGCTTTTACTGGATTAATGGAAGAGGATAGGATCAGCGTTGCTTCTTCCATATCAAGTGATGTACCAGATCACAAACCTATGCATTCTGGGTTGGAAGTTCAACTTGATGACGCCAAACATGAAGGAAAAAGCTCAGGGATTTCTCTGGAATCTACCTCAAAACACTTTCATGCAGTTGAAGTCGCAATGGCTAAGCAAACTCTTAAAGAACTAAAAGACTTGGATTTCCATGCCATCCTATCTTCAGAAAGAGGCGAAAAGCTGGAAAAAGTCTTAAAGGTGCTTATTGCTGATGCAGAATCCCAAGGCATAATCCCTAGTGAGTTAATCAATTTACAAGAGCATCTTAAGGTGATGAAGAATGAACATGAATCGGCCTCCAAGGATTTGACTGAATATAACAGTTTCTCTAGTAGAAAATTGAAGATAATGGCTCAACTTAAGAAGGATGCTGCTGAAGCTCGTGAGTTAGAGACTCTTCAAGTGGAGTTAGAAATTGCAAGAAACGCAAGAGAGGAGTTGTTGAAACAACTTGAAGAAATTGATAATATCATTAAGGATGTGCAGAAAGCTCAAGCTGATAATTTGGATGATGTTGAAGACCTGATATCAAGAATGGGACAGAAGAGCCAGAAACTTCAGGAGATGAAAATCGAGGAGGAAACATGGCAGCTCAGGAAAACTGAGGCCAACAGAATGCTGGAAAGAGTAGAGGAAGACTGGATCAAGGTTAAATTAATGTTTCCTGATGATTGATCATGCATTTTGGCCTACTGGAAATGGCATATGTACCCAACTTTTTGATACTTCTGAGTTCTCAACGTATTACACCATTCTTTGTTAACAGTTCTGTATCATAGCTGCCATTTGTACATGTTAATAACAAACTACTTCATTCTATTTTCATATGCAACTATGTCTTGAGTGGTAGAGTACATTGTAAATCCAACACGGTTCTGTTTTAATTGAAAGTTTGAAGCATATAAATCAATCTGACTATAACATCAAATAAAATGTCTCGATTATAACTCAACTGTGCCAAATACAGGGGAAGATCTACATCAAAAACGTCTCAGTAATAACAAGGTAAAAAGATTGTATAAGACAAATAGTCAGCACAAAATTGTAAGCAACTGGGA ATGAAAATGGAGTTTTTCAAAAGAGCCAAGGTGTTTCGGCTAAAATGCAGCCACCATAGCAAGTACCTGACAGCCGATGAAGACGATGAAAGAATCAAACAAAGCCGTGAAAACTCATCCAAAAAAGCCCGTTGGGTCTATGAGGCTGTTGAGGGAAAAGACAATGTCCTCCGTCTCAGGAACAGCTGGAGCCACAGGTACTTAACTGCAACTGATGATCCATTCTTGCTGGGAATGACAGGAAAAAAGGTTATACAGACCATTAGCCAGGGTCCCATATCAGAGTGGGAGCCTATCAAAGATGGATCTTATATCAAACTTAAGAGTCATACAGGTAGTTTTCTAAGAGCCAATCCTAGGGTTCCTCCTTGGAGGAATTCTGTTACCCATGATGAGCCGGGAAATTGGGCCGTTACTGATCACATGATCTTGTGGATCGTTGATATTGTTGAGATTGATTATCAGTCACCTGGCCCGGATGTTGGTGCTTTTACTGGATTAATGGAAGAGGATAGGATCAGCGTTGCTTCTTCCATATCAAGTGATGTACCAGATCACAAACCTATGCATTCTGGGTTGGAAGTTCAACTTGATGACGCCAAACATGAAGGAAAAAGCTCAGGGATTTCTCTGGAATCTACCTCAAAACACTTTCATGCAGTTGAAGTCGCAATGGCTAAGCAAACTCTTAAAGAACTAAAAGACTTGGATTTCCATGCCATCCTATCTTCAGAAAGAGGCGAAAAGCTGGAAAAAGTCTTAAAGGTGCTTATTGCTGATGCAGAATCCCAAGGCATAATCCCTAGTGAGTTAATCAATTTACAAGAGCATCTTAAGGTGATGAAGAATGAACATGAATCGGCCTCCAAGGATTTGACTGAATATAACAGTTTCTCTAGTAGAAAATTGAAGATAATGGCTCAACTTAAGAAGGATGCTGCTGAAGCTCGTGAGTTAGAGACTCTTCAAGTGGAGTTAGAAATTGCAAGAAACGCAAGAGAGGAGTTGTTGAAACAACTTGAAGAAATTGATAATATCATTAAGGATGTGCAGAAAGCTCAAGCTGATAATTTGGATGATGTTGAAGACCTGATATCAAGAATGGGACAGAAGAGCCAGAAACTTCAGGAGATGAAAATCGAGGAGGAAACATGGCAGCTCAGGAAAACTGAGGCCAACAGAATGCTGGAAAGAGTAGAGGAAGACTGGATCAAGGTTAAATTAATGTTTCCTGATGATTGA MKMEFFKRAKVFRLKCSHHSKYLTADEDDERIKQSRENSSKKARWVYEAVEGKDNVLRLRNSWSHRYLTATDDPFLLGMTGKKVIQTISQGPISEWEPIKDGSYIKLKSHTGSFLRANPRVPPWRNSVTHDEPGNWAVTDHMILWIVDIVEIDYQSPGPDVGAFTGLMEEDRISVASSISSDVPDHKPMHSGLEVQLDDAKHEGKSSGISLESTSKHFHAVEVAMAKQTLKELKDLDFHAILSSERGEKLEKVLKVLIADAESQGIIPSELINLQEHLKVMKNEHESASKDLTEYNSFSSRKLKIMAQLKKDAAEARELETLQVELEIARNAREELLKQLEEIDNIIKDVQKAQADNLDDVEDLISRMGQKSQKLQEMKIEEETWQLRKTEANRMLERVEEDWIKVKLMFPDD Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo10908.1 vs. NCBI nr
Match: gi|902210492|gb|KNA16450.1| (hypothetical protein SOVF_088590 [Spinacia oleracea]) HSP 1 Score: 770.8 bits (1989), Expect = 1.200e-219 Identity = 396/397 (99.75%), Postives = 397/397 (100.00%), Query Frame = 1
BLAST of Spo10908.1 vs. NCBI nr
Match: gi|731319572|ref|XP_010670342.1| (PREDICTED: myosin-4-like isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 513.5 bits (1321), Expect = 3.500e-142 Identity = 277/431 (64.27%), Postives = 336/431 (77.96%), Query Frame = 1
BLAST of Spo10908.1 vs. NCBI nr
Match: gi|731376361|ref|XP_010667541.1| (PREDICTED: uncharacterized protein LOC104884564 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 406.0 bits (1042), Expect = 7.900e-110 Identity = 234/424 (55.19%), Postives = 302/424 (71.23%), Query Frame = 1
BLAST of Spo10908.1 vs. NCBI nr
Match: gi|870841683|gb|KMS95315.1| (hypothetical protein BVRB_009420 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 401.4 bits (1030), Expect = 2.000e-108 Identity = 232/420 (55.24%), Postives = 300/420 (71.43%), Query Frame = 1
BLAST of Spo10908.1 vs. NCBI nr
Match: gi|902210493|gb|KNA16451.1| (hypothetical protein SOVF_088600 [Spinacia oleracea]) HSP 1 Score: 325.9 bits (834), Expect = 1.000e-85 Identity = 196/435 (45.06%), Postives = 277/435 (63.68%), Query Frame = 1
BLAST of Spo10908.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAD6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_088590 PE=4 SV=1) HSP 1 Score: 770.8 bits (1989), Expect = 8.600e-220 Identity = 396/397 (99.75%), Postives = 397/397 (100.00%), Query Frame = 1
BLAST of Spo10908.1 vs. UniProtKB/TrEMBL
Match: A0A0J8DWS7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_009420 PE=4 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 1.400e-108 Identity = 232/420 (55.24%), Postives = 300/420 (71.43%), Query Frame = 1
BLAST of Spo10908.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAC1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_088600 PE=4 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 7.300e-86 Identity = 196/435 (45.06%), Postives = 277/435 (63.68%), Query Frame = 1
BLAST of Spo10908.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CTS5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g040570 PE=4 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 1.700e-74 Identity = 198/468 (42.31%), Postives = 262/468 (55.98%), Query Frame = 1
BLAST of Spo10908.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FMT2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g040570 PE=4 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 1.600e-72 Identity = 195/464 (42.03%), Postives = 258/464 (55.60%), Query Frame = 1
BLAST of Spo10908.1 vs. TAIR (Arabidopsis)
Match: AT1G59710.1 (Protein of unknown function (DUF569)) HSP 1 Score: 152.5 bits (384), Expect = 5.600e-37 Identity = 76/152 (50.00%), Postives = 105/152 (69.08%), Query Frame = 1
BLAST of Spo10908.1 vs. TAIR (Arabidopsis)
Match: AT1G27100.1 (Actin cross-linking protein) HSP 1 Score: 149.8 bits (377), Expect = 3.600e-36 Identity = 78/152 (51.32%), Postives = 111/152 (73.03%), Query Frame = 1
BLAST of Spo10908.1 vs. TAIR (Arabidopsis)
Match: AT3G28630.1 (Protein of unknown function (DUF569)) HSP 1 Score: 146.4 bits (368), Expect = 4.000e-35 Identity = 84/213 (39.44%), Postives = 124/213 (58.22%), Query Frame = 1
BLAST of Spo10908.1 vs. TAIR (Arabidopsis)
Match: AT1G69900.1 (Actin cross-linking protein) HSP 1 Score: 142.5 bits (358), Expect = 5.800e-34 Identity = 76/155 (49.03%), Postives = 104/155 (67.10%), Query Frame = 1
BLAST of Spo10908.1 vs. TAIR (Arabidopsis)
Match: AT3G01311.1 (Protein of unknown function (DUF569)) HSP 1 Score: 141.7 bits (356), Expect = 9.900e-34 Identity = 87/242 (35.95%), Postives = 134/242 (55.37%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo10908.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo10908.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo10908.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo10908.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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