Spo10792 (gene) | SpinachBase

Overview


Name	Spo10792
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	(Expansin) (Precursor)
Location	chr1 : 41759984 .. 41762178 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGTGTACTGTAATACGAGTAATTAATTACGGAGTAATCAATGTTCTCACTCACGTCTCTACTACAGTGTTCCCCCTTTTTTGGACCCAGCAAATCCCCATTTACTTTATCAGCCCTACACCCTCCCCCTAAACCCCTCTATTTATTCCCCCTTCTTCCTCTCCCATTTTCCTCAACTCAACCCAACACAACTCAACTCCCCTCTTTCTCTCTCTTCCTCTGTTCACAAATGTAAATTTCTCTCTCTTAAAAACCTTGAACCAATCAAGCAATTTTTGCTTAAATTTGAAAGAAAAGTAGCTAAAATTCGCTTCATTTTTGCAGGAAAATGGCAGCCGGTAAAATTCTCTTAGTCGGCATTCTGACATTGTTGACAGTCGCTGACGCTTATGGTCATGGTGGAGGAGGAGGAGGCTGGATCAACGCTCACGCCACTTTCTACGGTGGCGGTGACGCTTCTGGCACCATGGGTACGCATTTACTATAAAATTCATAACATTTAGTCAGCCACGAGCCTAACCAACTAACTAACTTATATAAATTTATGATTTATTTAGGAGGAGCGTGCGGTTATGGAAATTTATACAGCCAAGGGTACGGAACTAACACGGCAGCACTAAGCACAGCATTATTCAACAATGGGTTAGCTTGTGGGTCGTGTTATGCAATTAGATGTGTTAATGACCCCAAATGGTGTCTTCGAGGCACAATTGTGGTCACTGCTACTAATTTCTGTCCACCTGGCGGGTGGTGCGACCCTCCTAACCACCACTTTGATCTCTCTCAGCCTATTTTCCAGCACATTGCTCAGTACAGAGCTGGTATCGTCCCCGTCGCTTACCGGAGGTAATTTCTTTTGTCCGTATAATTTGAACCCCTAACGCGGCTACTGAGTCATTGTTTGGTTGTGATGTGTACTCCATGAGATAAAAGAAAAATACCCTTTTCTGGAAATTAATTTCTTTGAAATAAAGAAATTAAAAAAAAGGAGGAGAAAGTTTAGTTAGTTAGGAAGTTGTTGTTTGAAAAGTTGTATGTGGAGATTTACTCTTTTTGCTGAAAAATACAAAAAAAGAAAGAAAGAAAAGTAAAGTAAAATGTTTTAAAGAATCACATGGAACTATAATACTTTTTCTTTGTTACCTTCGTTTAAAGGTATGTTTTCAACCGTAGAAACACACCGCAAATTACGGATTTGTTTTGAGATATGATGCTAGCTTTAGAAAAAAGTGACCATTACAAATTTATTGCCCTTAGTTGACAAATTCGCAACATGTCTACTATGGATAATTAAACTTTTTTAAGTAAAAAAATTTAGACTCTATAATCTGTATTGAGTTGGTGTTTTTTGTTTGTTTGTGTAGGGTGCCTTGCAGGAGAAGCGGTGGGATAAGGTTCACAATCAATGGTCACTCATACTTCAACTTGGTGTTAGTGACCAACGTTGGTGGTGCAGGAGACGTCCATTCAGTTGCAGTTAAAGGGTCAAGGACACGTTGGCAGGCAATGTCAAGGAACTGGGGGCAAAATTGGCAAAGCAACAATTACCTCAACGGGCAGTCTCTCTCCTTTAGGGTCGTTACTAGTGACGGCCGTAGCGTTGTGTCCTTTAACGTTGCCCCGGCCCATTGGTCTTTCGGGCAGACCTACTCGGGTGCCCAATTCCGCTGAGGCCCGAAAAAGAGAATCCTGAATTGACGGTCGTGCCCTTTTGTTTAAGGCTCTAGTAATGTTAAATTAGTATATATACGTACTCTATAGTTTTAGGGTTTGTTTACTTAGGCCAGTATTTTAATTGGCCAAGGTTTACCACATTACTTTTTCTTGGGGTTTAAAATTGTAAAGACAGCTTATTTTACGAGGCGTCTTTCCAAAACTACCCCTGTTACTATATTAGGTTACCCTTTAGTTGAAAACTTGAGAGTGACCTTTGTAAGTTGTAACTGTTTTAAGCAGCAGCTTGGCAGAGGTGAATTTTACCACCCGCCTTTAGTAACTTAGCATATTTTGGTTTTTTTTTTAGTATGCTATTTGAAGCAATTAGGTAATATTGGCATTTAAGTTTGGAATTTCAGATTGTGTATGAGGTGTGCTTATTGGAGTTTTAATATTAAGCAATTATTCAACTCTCAAAGTGTAAATTTTTCGTTATTTCAATCGTAATGAAATATATTTATCATAAACTTGCTCTAC

mRNA sequence

TTTTGTGTACTGTAATACGAGTAATTAATTACGGAGTAATCAATGTTCTCACTCACGTCTCTACTACAGTGTTCCCCCTTTTTTGGACCCAGCAAATCCCCATTTACTTTATCAGCCCTACACCCTCCCCCTAAACCCCTCTATTTATTCCCCCTTCTTCCTCTCCCATTTTCCTCAACTCAACCCAACACAACTCAACTCCCCTCTTTCTCTCTCTTCCTCTGTTCACAAATGTAAATTTCTCTCTCTTAAAAACCTTGAACCAATCAAGCAATTTTTGCTTAAATTTGAAAGAAAAGTAGCTAAAATTCGCTTCATTTTTGCAGGAAAATGGCAGCCGGTAAAATTCTCTTAGTCGGCATTCTGACATTGTTGACAGTCGCTGACGCTTATGGTCATGGTGGAGGAGGAGGAGGCTGGATCAACGCTCACGCCACTTTCTACGGTGGCGGTGACGCTTCTGGCACCATGGGAGGAGCGTGCGGTTATGGAAATTTATACAGCCAAGGGTACGGAACTAACACGGCAGCACTAAGCACAGCATTATTCAACAATGGGTTAGCTTGTGGGTCGTGTTATGCAATTAGATGTGTTAATGACCCCAAATGGTGTCTTCGAGGCACAATTGTGGTCACTGCTACTAATTTCTGTCCACCTGGCGGGTGGTGCGACCCTCCTAACCACCACTTTGATCTCTCTCAGCCTATTTTCCAGCACATTGCTCAGTACAGAGCTGGTATCGTCCCCGTCGCTTACCGGAGGGTGCCTTGCAGGAGAAGCGGTGGGATAAGGTTCACAATCAATGGTCACTCATACTTCAACTTGGTGTTAGTGACCAACGTTGGTGGTGCAGGAGACGTCCATTCAGTTGCAGTTAAAGGGTCAAGGACACGTTGGCAGGCAATGTCAAGGAACTGGGGGCAAAATTGGCAAAGCAACAATTACCTCAACGGGCAGTCTCTCTCCTTTAGGGTCGTTACTAGTGACGGCCGTAGCGTTGTGTCCTTTAACGTTGCCCCGGCCCATTGGTCTTTCGGGCAGACCTACTCGGGTGCCCAATTCCGCTGAGGCCCGAAAAAGAGAATCCTGAATTGACGGTCGTGCCCTTTTGTTTAAGGCTCTAGTAATGTTAAATTAGTATATATACGTACTCTATAGTTTTAGGGTTTGTTTACTTAGGCCAGTATTTTAATTGGCCAAGGTTTACCACATTACTTTTTCTTGGGGTTTAAAATTGTAAAGACAGCTTATTTTACGAGGCGTCTTTCCAAAACTACCCCTGTTACTATATTAGGTTACCCTTTAGTTGAAAACTTGAGAGTGACCTTTGTAAGTTGTAACTGTTTTAAGCAGCAGCTTGGCAGAGGTGAATTTTACCACCCGCCTTTAGTAACTTAGCATATTTTGGTTTTTTTTTTAGTATGCTATTTGAAGCAATTAGGTAATATTGGCATTTAAGTTTGGAATTTCAGATTGTGTATGAGGTGTGCTTATTGGAGTTTTAATATTAAGCAATTATTCAACTCTCAAAGTGTAAATTTTTCGTTATTTCAATCGTAATGAAATATATTTATCATAAACTTGCTCTAC

Coding sequence (CDS)

ATGGCAGCCGGTAAAATTCTCTTAGTCGGCATTCTGACATTGTTGACAGTCGCTGACGCTTATGGTCATGGTGGAGGAGGAGGAGGCTGGATCAACGCTCACGCCACTTTCTACGGTGGCGGTGACGCTTCTGGCACCATGGGAGGAGCGTGCGGTTATGGAAATTTATACAGCCAAGGGTACGGAACTAACACGGCAGCACTAAGCACAGCATTATTCAACAATGGGTTAGCTTGTGGGTCGTGTTATGCAATTAGATGTGTTAATGACCCCAAATGGTGTCTTCGAGGCACAATTGTGGTCACTGCTACTAATTTCTGTCCACCTGGCGGGTGGTGCGACCCTCCTAACCACCACTTTGATCTCTCTCAGCCTATTTTCCAGCACATTGCTCAGTACAGAGCTGGTATCGTCCCCGTCGCTTACCGGAGGGTGCCTTGCAGGAGAAGCGGTGGGATAAGGTTCACAATCAATGGTCACTCATACTTCAACTTGGTGTTAGTGACCAACGTTGGTGGTGCAGGAGACGTCCATTCAGTTGCAGTTAAAGGGTCAAGGACACGTTGGCAGGCAATGTCAAGGAACTGGGGGCAAAATTGGCAAAGCAACAATTACCTCAACGGGCAGTCTCTCTCCTTTAGGGTCGTTACTAGTGACGGCCGTAGCGTTGTGTCCTTTAACGTTGCCCCGGCCCATTGGTCTTTCGGGCAGACCTACTCGGGTGCCCAATTCCGCTGA

Protein sequence

MAAGKILLVGILTLLTVADAYGHGGGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLACGSCYAIRCVNDPKWCLRGTIVVTATNFCPPGGWCDPPNHHFDLSQPIFQHIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQAMSRNWGQNWQSNNYLNGQSLSFRVVTSDGRSVVSFNVAPAHWSFGQTYSGAQFR

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo10792.1	Spo10792.1	mRNA

Homology

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BLAST of Spo10792.1 vs. NCBI nr
Match: gi|902144239|gb|KNA04903.1| (hypothetical protein SOVF_195430 [Spinacia oleracea])

HSP 1 Score: 513.1 bits (1320), Expect = 2.700e-142
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 1


		  
Query: 1   MAAGKILLVGILTLLTVADAYGHGGGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQG 60
           MAAGKILLVGILTLLTVADAYGHGGGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQG
Sbjct: 1   MAAGKILLVGILTLLTVADAYGHGGGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQG 60

Query: 61  YGTNTAALSTALFNNGLACGSCYAIRCVNDPKWCLRGTIVVTATNFCPPGGWCDPPNHHF 120
           YGTNTAALSTALFNNGLACGSCYAIRCVNDPKWCLRGTIVVTATNFCPPGGWCDPPNHHF
Sbjct: 61  YGTNTAALSTALFNNGLACGSCYAIRCVNDPKWCLRGTIVVTATNFCPPGGWCDPPNHHF 120

Query: 121 DLSQPIFQHIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSV 180
           DLSQPIFQHIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSV
Sbjct: 121 DLSQPIFQHIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSV 180

Query: 181 AVKGSRTRWQAMSRNWGQNWQSNNYLNGQSLSFRVVTSDGRSVVSFNVAPAHWSFGQTYS 240
           AVKGSRTRWQAMSRNWGQNWQSNNYLNGQSLSFRVVTSDGRSVVSFNVAPAHWSFGQTYS
Sbjct: 181 AVKGSRTRWQAMSRNWGQNWQSNNYLNGQSLSFRVVTSDGRSVVSFNVAPAHWSFGQTYS 240

Query: 241 GAQFR 246
           GAQFR
Sbjct: 241 GAQFR 245

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BLAST of Spo10792.1 vs. NCBI nr
Match: gi|731343947|ref|XP_010683150.1| (PREDICTED: expansin-A10-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 449.1 bits (1154), Expect = 4.900e-123
Identity = 214/259 (82.63%), Postives = 228/259 (88.03%), Query Frame = 1


		  
Query: 1   MAAGKILLVGILTLLTVADAYGHG--------------GGGGGWINAHATFYGGGDASGT 60
           MAA KILLV ILTL ++A+AYG G              GGGGGW NAHATFYGGGDASGT
Sbjct: 3   MAAAKILLVSILTLFSIAEAYGRGRAYHRGRGYGRSGGGGGGGWTNAHATFYGGGDASGT 62

Query: 61  MGGACGYGNLYSQGYGTNTAALSTALFNNGLACGSCYAIRCVNDPKWCLRGTIVVTATNF 120
           MGGACGYGNLYSQGYGTNTAALSTALFNNGLACGSCY IRCV+DPKWCL GTIVVTATNF
Sbjct: 63  MGGACGYGNLYSQGYGTNTAALSTALFNNGLACGSCYEIRCVDDPKWCLHGTIVVTATNF 122

Query: 121 CPPGGWCDPPNHHFDLSQPIFQHIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLV 180
           CPPGG CDPP HHFDLSQPIFQHIAQYRAGI+PVAYRRVPCRR GGIRFTINGHSYFNLV
Sbjct: 123 CPPGGCCDPPLHHFDLSQPIFQHIAQYRAGIIPVAYRRVPCRRKGGIRFTINGHSYFNLV 182

Query: 181 LVTNVGGAGDVHSVAVKGSRTRWQAMSRNWGQNWQSNNYLNGQSLSFRVVTSDGRSVVSF 240
           L+TNV GAGDVH VA+KGSRT WQAMSRNWGQNWQSNNYLNGQ+LSF+V  SDG ++VS+
Sbjct: 183 LITNVAGAGDVHGVAIKGSRTGWQAMSRNWGQNWQSNNYLNGQALSFKVTASDGHTIVSY 242

Query: 241 NVAPAHWSFGQTYSGAQFR 246
           NVAP +WSFGQTY+GAQFR
Sbjct: 243 NVAPPNWSFGQTYTGAQFR 261

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BLAST of Spo10792.1 vs. NCBI nr
Match: gi|870855298|gb|KMT07031.1| (hypothetical protein BVRB_6g153620 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 449.1 bits (1154), Expect = 4.900e-123
Identity = 214/259 (82.63%), Postives = 228/259 (88.03%), Query Frame = 1


		  
Query: 1   MAAGKILLVGILTLLTVADAYGHG--------------GGGGGWINAHATFYGGGDASGT 60
           MAA KILLV ILTL ++A+AYG G              GGGGGW NAHATFYGGGDASGT
Sbjct: 1   MAAAKILLVSILTLFSIAEAYGRGRAYHRGRGYGRSGGGGGGGWTNAHATFYGGGDASGT 60

Query: 61  MGGACGYGNLYSQGYGTNTAALSTALFNNGLACGSCYAIRCVNDPKWCLRGTIVVTATNF 120
           MGGACGYGNLYSQGYGTNTAALSTALFNNGLACGSCY IRCV+DPKWCL GTIVVTATNF
Sbjct: 61  MGGACGYGNLYSQGYGTNTAALSTALFNNGLACGSCYEIRCVDDPKWCLHGTIVVTATNF 120

Query: 121 CPPGGWCDPPNHHFDLSQPIFQHIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLV 180
           CPPGG CDPP HHFDLSQPIFQHIAQYRAGI+PVAYRRVPCRR GGIRFTINGHSYFNLV
Sbjct: 121 CPPGGCCDPPLHHFDLSQPIFQHIAQYRAGIIPVAYRRVPCRRKGGIRFTINGHSYFNLV 180

Query: 181 LVTNVGGAGDVHSVAVKGSRTRWQAMSRNWGQNWQSNNYLNGQSLSFRVVTSDGRSVVSF 240
           L+TNV GAGDVH VA+KGSRT WQAMSRNWGQNWQSNNYLNGQ+LSF+V  SDG ++VS+
Sbjct: 181 LITNVAGAGDVHGVAIKGSRTGWQAMSRNWGQNWQSNNYLNGQALSFKVTASDGHTIVSY 240

Query: 241 NVAPAHWSFGQTYSGAQFR 246
           NVAP +WSFGQTY+GAQFR
Sbjct: 241 NVAPPNWSFGQTYTGAQFR 259

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BLAST of Spo10792.1 vs. NCBI nr
Match: gi|743799429|ref|XP_011013147.1| (PREDICTED: expansin-A1 [Populus euphratica])

HSP 1 Score: 436.0 bits (1120), Expect = 4.300e-119
Identity = 206/253 (81.42%), Postives = 224/253 (88.54%), Query Frame = 1


		  
Query: 1   MAAGKILLVGILTLLTVADAYGHGGGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQG 60
           MA   I LVG L +++  + YG    GGGWINAHATFYGGGDASGTMGGACGYGNLYSQG
Sbjct: 1   MALAGIFLVGFLAMVSSVNGYG----GGGWINAHATFYGGGDASGTMGGACGYGNLYSQG 60

Query: 61  YGTNTAALSTALFNNGLACGSCYAIRCVNDPKWCLRGTIVVTATNFCPP--------GGW 120
           YGTNTAALSTALFNNGL+CGSCY IRCVNDPKWCL G+IV+TATNFCPP        GGW
Sbjct: 61  YGTNTAALSTALFNNGLSCGSCYEIRCVNDPKWCLPGSIVITATNFCPPNNALPNNAGGW 120

Query: 121 CDPPNHHFDLSQPIFQHIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVG 180
           C+PP HHFDLSQP+FQHIAQYRAGIVPV+YRRVPCRR GGIRFTINGHSYFNLVL+TNVG
Sbjct: 121 CNPPQHHFDLSQPVFQHIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVG 180

Query: 181 GAGDVHSVAVKGSRTRWQAMSRNWGQNWQSNNYLNGQSLSFRVVTSDGRSVVSFNVAPAH 240
           GAGDVHSV++KGSRT WQ MSRNWGQNWQSNNYLNGQSLSF+V TSDGR+VVS+NVAP+ 
Sbjct: 181 GAGDVHSVSIKGSRTGWQPMSRNWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNVAPSS 240

Query: 241 WSFGQTYSGAQFR 246
           WSFGQT+SGAQFR
Sbjct: 241 WSFGQTFSGAQFR 249

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BLAST of Spo10792.1 vs. NCBI nr
Match: gi|350528647|gb|AEQ28765.1| (expansin 3 [Prunus salicina])

HSP 1 Score: 434.1 bits (1115), Expect = 1.600e-118
Identity = 206/246 (83.74%), Postives = 220/246 (89.43%), Query Frame = 1


		  
Query: 8   LVGILTLLTVADAYGHGGGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAA 67
           LVG+L +++ A AYG    GGGW+NA ATFYGGGDASGTMGGACGYGNLYSQGYGTNTAA
Sbjct: 11  LVGLLAMVSCAHAYG----GGGWVNARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAA 70

Query: 68  LSTALFNNGLACGSCYAIRCVNDPKWCLRGTIVVTATNFCPP--------GGWCDPPNHH 127
           LSTALFNNGL CGSCY IRCVNDPKWCL G IVVTATNFCPP        GGWC+PP HH
Sbjct: 71  LSTALFNNGLGCGSCYEIRCVNDPKWCLPGAIVVTATNFCPPNNALPNNAGGWCNPPQHH 130

Query: 128 FDLSQPIFQHIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVGGAGDVHS 187
           FDLSQP+FQHIAQYRAG+VPVAYRRVPCRR GGIRFTINGHSYFNLVL+TNVGGAGDVHS
Sbjct: 131 FDLSQPVFQHIAQYRAGVVPVAYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHS 190

Query: 188 VAVKGSRTRWQAMSRNWGQNWQSNNYLNGQSLSFRVVTSDGRSVVSFNVAPAHWSFGQTY 246
           V+VKGSRT WQAMSRNWGQNWQSN+YLNGQSLSF+V TSDGR+VVS+N APA WSFGQTY
Sbjct: 191 VSVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVVSYNAAPAGWSFGQTY 250

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BLAST of Spo10792.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QDY6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_195430 PE=4 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 1.900e-142
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 1


		  
Query: 1   MAAGKILLVGILTLLTVADAYGHGGGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQG 60
           MAAGKILLVGILTLLTVADAYGHGGGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQG
Sbjct: 1   MAAGKILLVGILTLLTVADAYGHGGGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQG 60

Query: 61  YGTNTAALSTALFNNGLACGSCYAIRCVNDPKWCLRGTIVVTATNFCPPGGWCDPPNHHF 120
           YGTNTAALSTALFNNGLACGSCYAIRCVNDPKWCLRGTIVVTATNFCPPGGWCDPPNHHF
Sbjct: 61  YGTNTAALSTALFNNGLACGSCYAIRCVNDPKWCLRGTIVVTATNFCPPGGWCDPPNHHF 120

Query: 121 DLSQPIFQHIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSV 180
           DLSQPIFQHIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSV
Sbjct: 121 DLSQPIFQHIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSV 180

Query: 181 AVKGSRTRWQAMSRNWGQNWQSNNYLNGQSLSFRVVTSDGRSVVSFNVAPAHWSFGQTYS 240
           AVKGSRTRWQAMSRNWGQNWQSNNYLNGQSLSFRVVTSDGRSVVSFNVAPAHWSFGQTYS
Sbjct: 181 AVKGSRTRWQAMSRNWGQNWQSNNYLNGQSLSFRVVTSDGRSVVSFNVAPAHWSFGQTYS 240

Query: 241 GAQFR 246
           GAQFR
Sbjct: 241 GAQFR 245

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BLAST of Spo10792.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EV55_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g153620 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 3.400e-123
Identity = 214/259 (82.63%), Postives = 228/259 (88.03%), Query Frame = 1


		  
Query: 1   MAAGKILLVGILTLLTVADAYGHG--------------GGGGGWINAHATFYGGGDASGT 60
           MAA KILLV ILTL ++A+AYG G              GGGGGW NAHATFYGGGDASGT
Sbjct: 1   MAAAKILLVSILTLFSIAEAYGRGRAYHRGRGYGRSGGGGGGGWTNAHATFYGGGDASGT 60

Query: 61  MGGACGYGNLYSQGYGTNTAALSTALFNNGLACGSCYAIRCVNDPKWCLRGTIVVTATNF 120
           MGGACGYGNLYSQGYGTNTAALSTALFNNGLACGSCY IRCV+DPKWCL GTIVVTATNF
Sbjct: 61  MGGACGYGNLYSQGYGTNTAALSTALFNNGLACGSCYEIRCVDDPKWCLHGTIVVTATNF 120

Query: 121 CPPGGWCDPPNHHFDLSQPIFQHIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLV 180
           CPPGG CDPP HHFDLSQPIFQHIAQYRAGI+PVAYRRVPCRR GGIRFTINGHSYFNLV
Sbjct: 121 CPPGGCCDPPLHHFDLSQPIFQHIAQYRAGIIPVAYRRVPCRRKGGIRFTINGHSYFNLV 180

Query: 181 LVTNVGGAGDVHSVAVKGSRTRWQAMSRNWGQNWQSNNYLNGQSLSFRVVTSDGRSVVSF 240
           L+TNV GAGDVH VA+KGSRT WQAMSRNWGQNWQSNNYLNGQ+LSF+V  SDG ++VS+
Sbjct: 181 LITNVAGAGDVHGVAIKGSRTGWQAMSRNWGQNWQSNNYLNGQALSFKVTASDGHTIVSY 240

Query: 241 NVAPAHWSFGQTYSGAQFR 246
           NVAP +WSFGQTY+GAQFR
Sbjct: 241 NVAPPNWSFGQTYTGAQFR 259

[Close]

BLAST of Spo10792.1 vs. UniProtKB/TrEMBL
Match: G8HZH2_9ROSA (Expansin 3 OS=Prunus salicina PE=2 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 1.100e-118
Identity = 206/246 (83.74%), Postives = 220/246 (89.43%), Query Frame = 1


		  
Query: 8   LVGILTLLTVADAYGHGGGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAA 67
           LVG+L +++ A AYG    GGGW+NA ATFYGGGDASGTMGGACGYGNLYSQGYGTNTAA
Sbjct: 11  LVGLLAMVSCAHAYG----GGGWVNARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAA 70

Query: 68  LSTALFNNGLACGSCYAIRCVNDPKWCLRGTIVVTATNFCPP--------GGWCDPPNHH 127
           LSTALFNNGL CGSCY IRCVNDPKWCL G IVVTATNFCPP        GGWC+PP HH
Sbjct: 71  LSTALFNNGLGCGSCYEIRCVNDPKWCLPGAIVVTATNFCPPNNALPNNAGGWCNPPQHH 130

Query: 128 FDLSQPIFQHIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVGGAGDVHS 187
           FDLSQP+FQHIAQYRAG+VPVAYRRVPCRR GGIRFTINGHSYFNLVL+TNVGGAGDVHS
Sbjct: 131 FDLSQPVFQHIAQYRAGVVPVAYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHS 190

Query: 188 VAVKGSRTRWQAMSRNWGQNWQSNNYLNGQSLSFRVVTSDGRSVVSFNVAPAHWSFGQTY 246
           V+VKGSRT WQAMSRNWGQNWQSN+YLNGQSLSF+V TSDGR+VVS+N APA WSFGQTY
Sbjct: 191 VSVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVVSYNAAPAGWSFGQTY 250

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BLAST of Spo10792.1 vs. UniProtKB/TrEMBL
Match: A5BA94_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0108g01020 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 3.300e-118
Identity = 202/245 (82.45%), Postives = 223/245 (91.02%), Query Frame = 1


		  
Query: 1   MAAGKILLVGILTLLTVADAYGHGGGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQG 60
           MA    LLVGIL++++  + Y      GGWINAHATFYGGGDASGTMGGACGYGNLYSQG
Sbjct: 1   MALLGFLLVGILSMVSAVNGYY-----GGWINAHATFYGGGDASGTMGGACGYGNLYSQG 60

Query: 61  YGTNTAALSTALFNNGLACGSCYAIRCVNDPKWCLRGTIVVTATNFCPPGGWCDPPNHHF 120
           YGTNTAALSTALFNNGL+CG+C+ +RCVNDP+WCL GTIVVTATNFCPPGGWCDPP  HF
Sbjct: 61  YGTNTAALSTALFNNGLSCGACFELRCVNDPQWCLPGTIVVTATNFCPPGGWCDPPQQHF 120

Query: 121 DLSQPIFQHIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSV 180
           DLSQP+FQHIAQYRAGIVPVAYRRV CR+SGGIRFT+NGHSYFNLVLVTNVGGAGDVH+V
Sbjct: 121 DLSQPVFQHIAQYRAGIVPVAYRRVSCRKSGGIRFTVNGHSYFNLVLVTNVGGAGDVHAV 180

Query: 181 AVKGSRTRWQAMSRNWGQNWQSNNYLNGQSLSFRVVTSDGRSVVSFNVAPAHWSFGQTYS 240
           ++KGSRT WQ MSRNWGQNWQSN+YLNGQSLSFRVVTSDGR++VS+NVAPA WSFGQTY+
Sbjct: 181 SIKGSRTAWQPMSRNWGQNWQSNSYLNGQSLSFRVVTSDGRAIVSYNVAPAGWSFGQTYT 240

Query: 241 GAQFR 246
           G QFR
Sbjct: 241 GGQFR 240

[Close]

BLAST of Spo10792.1 vs. UniProtKB/TrEMBL
Match: Q6T5H5_9ROSI (Alpha-expansin 3 OS=Populus tremula x Populus tremuloides GN=Exp3 PE=2 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 4.300e-118
Identity = 205/253 (81.03%), Postives = 225/253 (88.93%), Query Frame = 1


		  
Query: 1   MAAGKILLVGILTLLTVADAYGHGGGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQG 60
           MA   I LVG L +  V+  YG+GGGG  WINAHATFYGGGDASGTMGGACGYGNLYSQG
Sbjct: 1   MALAGIFLVGFLAM--VSSVYGYGGGG--WINAHATFYGGGDASGTMGGACGYGNLYSQG 60

Query: 61  YGTNTAALSTALFNNGLACGSCYAIRCVNDPKWCLRGTIVVTATNFCPP--------GGW 120
           YGTNTAALSTALFN+GL+CGSC+ IRCVNDPKWCL G+IV+TATNFCPP        GGW
Sbjct: 61  YGTNTAALSTALFNSGLSCGSCFEIRCVNDPKWCLPGSIVITATNFCPPNNALPNNAGGW 120

Query: 121 CDPPNHHFDLSQPIFQHIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVG 180
           C+PP HHFDLSQP+FQHIAQYRAGIVPV+YRRVPCRR GGIRFT+NGHSYFNLVL+TNVG
Sbjct: 121 CNPPQHHFDLSQPVFQHIAQYRAGIVPVSYRRVPCRRRGGIRFTVNGHSYFNLVLITNVG 180

Query: 181 GAGDVHSVAVKGSRTRWQAMSRNWGQNWQSNNYLNGQSLSFRVVTSDGRSVVSFNVAPAH 240
           GAGDVHSV++KGSRT WQ MSRNWGQNWQSNNYLNGQSLSF+V TSDGR+VVS+NVAP+ 
Sbjct: 181 GAGDVHSVSIKGSRTGWQPMSRNWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNVAPSS 240

Query: 241 WSFGQTYSGAQFR 246
           WSFGQT+SGAQFR
Sbjct: 241 WSFGQTFSGAQFR 249

[Close]

BLAST of Spo10792.1 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 2.500e-111
Identity = 193/246 (78.46%), Postives = 213/246 (86.59%), Query Frame = 1


		  
Query: 9   VGILTLLTVAD-AYGHGGGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAA 68
           +G L ++ V   A    G GGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGT+TAA
Sbjct: 4   LGFLVMIMVGVMASSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAA 63

Query: 69  LSTALFNNGLACGSCYAIRCVNDPKWCLRGTIVVTATNFCPP--------GGWCDPPNHH 128
           LSTALFNNGL+CGSC+ IRC ND KWCL G+IVVTATNFCPP        GGWC+PP  H
Sbjct: 64  LSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEH 123

Query: 129 FDLSQPIFQHIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVGGAGDVHS 188
           FDL+QP+FQ IAQYRAGIVPV+YRRVPCRR GGIRFTINGHSYFNLVL+TNVGGAGDVHS
Sbjct: 124 FDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHS 183

Query: 189 VAVKGSRTRWQAMSRNWGQNWQSNNYLNGQSLSFRVVTSDGRSVVSFNVAPAHWSFGQTY 246
            A+KGSRT WQAMSRNWGQNWQSN+YLNGQ+LSF+V TSDGR+VVSFN APA WS+GQT+
Sbjct: 184 AAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTF 243

[Close]

BLAST of Spo10792.1 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 1.000e-109
Identity = 193/248 (77.82%), Postives = 210/248 (84.68%), Query Frame = 1


		  
Query: 8   LVGILTLLTVADAYGHGGG--GGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTNT 67
           LV  L + T+     H  G  GGGW+NAHATFYGGGDASGTMGGACGYGNLYSQGYGTNT
Sbjct: 3   LVTFLFIATLGAMTSHVNGYAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNT 62

Query: 68  AALSTALFNNGLACGSCYAIRCVNDPKWCLRGTIVVTATNFCPP--------GGWCDPPN 127
           AALSTALFNNGL+CG+C+ IRC ND KWCL G+IVVTATNFCPP        GGWC+PP 
Sbjct: 63  AALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQ 122

Query: 128 HHFDLSQPIFQHIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVGGAGDV 187
            HFDLSQP+FQ IAQYRAGIVPVAYRRVPC R GGIRFTINGHSYFNLVL+TNVGGAGDV
Sbjct: 123 QHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDV 182

Query: 188 HSVAVKGSRTRWQAMSRNWGQNWQSNNYLNGQSLSFRVVTSDGRSVVSFNVAPAHWSFGQ 246
           HS  VKGSRT WQAMSRNWGQNWQSN+YLNGQSLSF+V TSDG+++VS NVA A WSFGQ
Sbjct: 183 HSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQ 242

[Close]

BLAST of Spo10792.1 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 393.3 bits (1009), Expect = 2.000e-108
Identity = 189/253 (74.70%), Postives = 209/253 (82.61%), Query Frame = 1


		  
Query: 1   MAAGKILLVGILTLLTVADAYGHGGGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQG 60
           M  GK+ L+GI      A      G   GW+NAHATFYGG DASGTMGGACGYGNLYSQG
Sbjct: 1   MFMGKMGLLGIALFCFAAMVCSVHGYDAGWVNAHATFYGGSDASGTMGGACGYGNLYSQG 60

Query: 61  YGTNTAALSTALFNNGLACGSCYAIRCVNDPKWCLRGTIVVTATNFCPP--------GGW 120
           YGTNTAALSTALFNNGL+CG+C+ I+C +D  WCL G I+VTATNFCPP        GGW
Sbjct: 61  YGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGW 120

Query: 121 CDPPNHHFDLSQPIFQHIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVG 180
           C+PP HHFDLSQP+FQ IAQY+AG+VPV+YRRVPC R GGIRFTINGHSYFNLVLVTNVG
Sbjct: 121 CNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVG 180

Query: 181 GAGDVHSVAVKGSRTRWQAMSRNWGQNWQSNNYLNGQSLSFRVVTSDGRSVVSFNVAPAH 240
           GAGDVHSVAVKGSRTRWQ MSRNWGQNWQSNN LNGQ+LSF+V  SDGR+VVS N+APA 
Sbjct: 181 GAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPAS 240

Query: 241 WSFGQTYSGAQFR 246
           WSFGQT++G QFR
Sbjct: 241 WSFGQTFTGRQFR 253

[Close]

BLAST of Spo10792.1 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 6.400e-107
Identity = 184/227 (81.06%), Postives = 204/227 (89.87%), Query Frame = 1


		  
Query: 22  GHGGGG--GGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLAC 81
           GH  GG  G WINAHATFYGGGDASGTMGGACGYGNLYSQGYG  TAALSTALF+ GL+C
Sbjct: 28  GHHPGGHMGPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSC 87

Query: 82  GSCYAIRCVNDPKWCLRG-TIVVTATNFCPPGGWCDPPNHHFDLSQPIFQHIAQYRAGIV 141
           G+C+ + CVNDP+WC++G +IVVTATNFCPPGG CDPPNHHFDLSQPI++ IA Y++GI+
Sbjct: 88  GACFELMCVNDPQWCIKGRSIVVTATNFCPPGGACDPPNHHFDLSQPIYEKIALYKSGII 147

Query: 142 PVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQAMSRNWGQ 201
           PV YRRV C+RSGGIRFTINGHSYFNLVLVTNVGGAGDVHSV++KGSRT+WQ MSRNWGQ
Sbjct: 148 PVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQ 207

Query: 202 NWQSNNYLNGQSLSFRVVTSDGRSVVSFNVAPAHWSFGQTYSGAQFR 246
           NWQSN+YLNGQSLSF V TSD RSVVSFNVAP  WSFGQTY+G QFR
Sbjct: 208 NWQSNSYLNGQSLSFVVTTSDRRSVVSFNVAPPTWSFGQTYTGGQFR 254

[Close]

BLAST of Spo10792.1 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 5.200e-101
Identity = 170/229 (74.24%), Postives = 193/229 (84.28%), Query Frame = 1


		  
Query: 25  GGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLACGSCYA 84
           G   GW+NA ATFYGG DASGTMGGACGYGNLYSQGYGTNTAALSTALFN G +CG+C+ 
Sbjct: 24  GYSSGWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQ 83

Query: 85  IRCVNDPKWCLRGTIVVTATNFCPP--------GGWCDPPNHHFDLSQPIFQHIAQYRAG 144
           I+CV+DPKWC+ GTI VT TNFCPP        GGWC+PP HHFDL+QPIF  IAQY+AG
Sbjct: 84  IKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAG 143

Query: 145 IVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQAMSRNW 204
           +VPV YRRV CRR GGIRFTINGHSYFNLVL+TNV GAGDV SV++KG+ TRWQ+MSRNW
Sbjct: 144 VVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNW 203

Query: 205 GQNWQSNNYLNGQSLSFRVVTSDGRSVVSFNVAPAHWSFGQTYSGAQFR 246
           GQNWQSN  L+GQ+LSF+V TSDGR+V+S N  P +WSFGQTY+G QFR
Sbjct: 204 GQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYTGKQFR 252

[Close]

BLAST of Spo10792.1 vs. TAIR (Arabidopsis)
Match: AT1G26770.2 (expansin A10)

HSP 1 Score: 402.9 bits (1034), Expect = 1.400e-112
Identity = 193/246 (78.46%), Postives = 213/246 (86.59%), Query Frame = 1


		  
Query: 9   VGILTLLTVAD-AYGHGGGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAA 68
           +G L ++ V   A    G GGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGT+TAA
Sbjct: 14  LGFLVMIMVGVMASSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAA 73

Query: 69  LSTALFNNGLACGSCYAIRCVNDPKWCLRGTIVVTATNFCPP--------GGWCDPPNHH 128
           LSTALFNNGL+CGSC+ IRC ND KWCL G+IVVTATNFCPP        GGWC+PP  H
Sbjct: 74  LSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEH 133

Query: 129 FDLSQPIFQHIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVGGAGDVHS 188
           FDL+QP+FQ IAQYRAGIVPV+YRRVPCRR GGIRFTINGHSYFNLVL+TNVGGAGDVHS
Sbjct: 134 FDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHS 193

Query: 189 VAVKGSRTRWQAMSRNWGQNWQSNNYLNGQSLSFRVVTSDGRSVVSFNVAPAHWSFGQTY 246
            A+KGSRT WQAMSRNWGQNWQSN+YLNGQ+LSF+V TSDGR+VVSFN APA WS+GQT+
Sbjct: 194 AAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTF 253

[Close]

BLAST of Spo10792.1 vs. TAIR (Arabidopsis)
Match: AT2G03090.1 (expansin A15)

HSP 1 Score: 393.3 bits (1009), Expect = 1.100e-109
Identity = 189/253 (74.70%), Postives = 209/253 (82.61%), Query Frame = 1


		  
Query: 1   MAAGKILLVGILTLLTVADAYGHGGGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQG 60
           M  GK+ L+GI      A      G   GW+NAHATFYGG DASGTMGGACGYGNLYSQG
Sbjct: 1   MFMGKMGLLGIALFCFAAMVCSVHGYDAGWVNAHATFYGGSDASGTMGGACGYGNLYSQG 60

Query: 61  YGTNTAALSTALFNNGLACGSCYAIRCVNDPKWCLRGTIVVTATNFCPP--------GGW 120
           YGTNTAALSTALFNNGL+CG+C+ I+C +D  WCL G I+VTATNFCPP        GGW
Sbjct: 61  YGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGW 120

Query: 121 CDPPNHHFDLSQPIFQHIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVG 180
           C+PP HHFDLSQP+FQ IAQY+AG+VPV+YRRVPC R GGIRFTINGHSYFNLVLVTNVG
Sbjct: 121 CNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVG 180

Query: 181 GAGDVHSVAVKGSRTRWQAMSRNWGQNWQSNNYLNGQSLSFRVVTSDGRSVVSFNVAPAH 240
           GAGDVHSVAVKGSRTRWQ MSRNWGQNWQSNN LNGQ+LSF+V  SDGR+VVS N+APA 
Sbjct: 181 GAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPAS 240

Query: 241 WSFGQTYSGAQFR 246
           WSFGQT++G QFR
Sbjct: 241 WSFGQTFTGRQFR 253

[Close]

BLAST of Spo10792.1 vs. TAIR (Arabidopsis)
Match: AT1G69530.3 (expansin A1)

HSP 1 Score: 389.8 bits (1000), Expect = 1.200e-108
Identity = 189/243 (77.78%), Postives = 206/243 (84.77%), Query Frame = 1


		  
Query: 8   LVGILTLLTVADAYGHGGG--GGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTNT 67
           LV  L + T+     H  G  GGGW+NAHATFYGGGDASGTMGGACGYGNLYSQGYGTNT
Sbjct: 3   LVTFLFIATLGAMTSHVNGYAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNT 62

Query: 68  AALSTALFNNGLACGSCYAIRCVNDPKWCLRGTIVVTATNFCPP--------GGWCDPPN 127
           AALSTALFNNGL+CG+C+ IRC ND KWCL G+IVVTATNFCPP        GGWC+PP 
Sbjct: 63  AALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQ 122

Query: 128 HHFDLSQPIFQHIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVGGAGDV 187
            HFDLSQP+FQ IAQYRAGIVPVAYRRVPC R GGIRFTINGHSYFNLVL+TNVGGAGDV
Sbjct: 123 QHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDV 182

Query: 188 HSVAVKGSRTRWQAMSRNWGQNWQSNNYLNGQSLSFRVVTSDGRSVVSFNVAPAHWSFGQ 241
           HS  VKGSRT WQAMSRNWGQNWQSN+YLNGQSLSF+V TSDG+++VS NVA A WSFGQ
Sbjct: 183 HSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQ 242

[Close]

BLAST of Spo10792.1 vs. TAIR (Arabidopsis)
Match: AT3G29030.1 (expansin A5)

HSP 1 Score: 388.3 bits (996), Expect = 3.600e-108
Identity = 184/227 (81.06%), Postives = 204/227 (89.87%), Query Frame = 1


		  
Query: 22  GHGGGG--GGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLAC 81
           GH  GG  G WINAHATFYGGGDASGTMGGACGYGNLYSQGYG  TAALSTALF+ GL+C
Sbjct: 28  GHHPGGHMGPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSC 87

Query: 82  GSCYAIRCVNDPKWCLRG-TIVVTATNFCPPGGWCDPPNHHFDLSQPIFQHIAQYRAGIV 141
           G+C+ + CVNDP+WC++G +IVVTATNFCPPGG CDPPNHHFDLSQPI++ IA Y++GI+
Sbjct: 88  GACFELMCVNDPQWCIKGRSIVVTATNFCPPGGACDPPNHHFDLSQPIYEKIALYKSGII 147

Query: 142 PVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQAMSRNWGQ 201
           PV YRRV C+RSGGIRFTINGHSYFNLVLVTNVGGAGDVHSV++KGSRT+WQ MSRNWGQ
Sbjct: 148 PVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQ 207

Query: 202 NWQSNNYLNGQSLSFRVVTSDGRSVVSFNVAPAHWSFGQTYSGAQFR 246
           NWQSN+YLNGQSLSF V TSD RSVVSFNVAP  WSFGQTY+G QFR
Sbjct: 208 NWQSNSYLNGQSLSFVVTTSDRRSVVSFNVAPPTWSFGQTYTGGQFR 254

[Close]

BLAST of Spo10792.1 vs. TAIR (Arabidopsis)
Match: AT5G56320.1 (expansin A14)

HSP 1 Score: 368.6 bits (945), Expect = 2.900e-102
Identity = 170/229 (74.24%), Postives = 193/229 (84.28%), Query Frame = 1


		  
Query: 25  GGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLACGSCYA 84
           G   GW+NA ATFYGG DASGTMGGACGYGNLYSQGYGTNTAALSTALFN G +CG+C+ 
Sbjct: 24  GYSSGWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQ 83

Query: 85  IRCVNDPKWCLRGTIVVTATNFCPP--------GGWCDPPNHHFDLSQPIFQHIAQYRAG 144
           I+CV+DPKWC+ GTI VT TNFCPP        GGWC+PP HHFDL+QPIF  IAQY+AG
Sbjct: 84  IKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAG 143

Query: 145 IVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQAMSRNW 204
           +VPV YRRV CRR GGIRFTINGHSYFNLVL+TNV GAGDV SV++KG+ TRWQ+MSRNW
Sbjct: 144 VVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNW 203

Query: 205 GQNWQSNNYLNGQSLSFRVVTSDGRSVVSFNVAPAHWSFGQTYSGAQFR 246
           GQNWQSN  L+GQ+LSF+V TSDGR+V+S N  P +WSFGQTY+G QFR
Sbjct: 204 GQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYTGKQFR 252

The following BLAST results are available for this feature:

BLAST of Spo10792.1 vs. NCBI nr
BLAST of Spo10792.1 vs. UniProtKB/TrEMBL
BLAST of Spo10792.1 vs. ExPASy Swiss-Prot
BLAST of Spo10792.1 vs. TAIR (Arabidopsis)

BLAST of Spo10792.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902144239\|gb\|KNA04903.1\|	2.7e-142	100.	hypothetical protein SOVF_1954...	[more]
gi\|731343947\|ref\|XP_010683150.1\|	4.9e-123	82.6	PREDICTED: expansin-A10-like [...	[more]
gi\|870855298\|gb\|KMT07031.1\|	4.9e-123	82.6	hypothetical protein BVRB_6g15...	[more]
gi\|743799429\|ref\|XP_011013147.1\|	4.3e-119	81.4	PREDICTED: expansin-A1 [Populu...	[more]
gi\|350528647\|gb\|AEQ28765.1\|	1.6e-118	83.7	expansin 3 [Prunus salicina]	[more]

BLAST of Spo10792.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QDY6_SPIOL	1.9e-142	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8EV55_BETVU	3.4e-123	82.6	Uncharacterized protein OS=Bet...	[more]
G8HZH2_9ROSA	1.1e-118	83.7	Expansin 3 OS=Prunus salicina ...	[more]
A5BA94_VITVI	3.3e-118	82.4	Putative uncharacterized prote...	[more]
Q6T5H5_9ROSI	4.3e-118	81.0	Alpha-expansin 3 OS=Populus tr...	[more]

BLAST of Spo10792.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
EXP10_ARATH	2.5e-111	78.4	Expansin-A10 OS=Arabidopsis th...	[more]
EXPA1_ARATH	1.0e-109	77.8	Expansin-A1 OS=Arabidopsis tha...	[more]
EXP15_ARATH	2.0e-108	74.7	Expansin-A15 OS=Arabidopsis th...	[more]
EXPA5_ARATH	6.4e-107	81.0	Expansin-A5 OS=Arabidopsis tha...	[more]
EXP14_ARATH	5.2e-101	74.2	Expansin-A14 OS=Arabidopsis th...	[more]

BLAST of Spo10792.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G26770.2	1.4e-112	78.4	expansin A10	[more]
AT2G03090.1	1.1e-109	74.7	expansin A15	[more]
AT1G69530.3	1.2e-108	77.7	expansin A1	[more]
AT3G29030.1	3.6e-108	81.0	expansin A5	[more]
AT5G56320.1	2.9e-102	74.2	expansin A14	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002963	Expansin	PRINTS	PR01226	EXPANSIN	coord: 198..219 score: 1.7E-82coord: 227..243 score: 1.7E-82coord: 110..127 score: 1.7E-82coord: 151..163 score: 1.7E-82coord: 60..74 score: 1.7E-82coord: 87..98 score: 1.7E-82coord: 163..184 score: 1.7E-82coord: 99..109 score: 1.7E-82coord: 127..140 score: 1.7
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 65..142 score: 2.0
IPR007112	Expansin/pollen allergen, DPBB domain	PROFILE	PS50842	EXPANSIN_EG45	coord: 48..152 score: 31
IPR007117	Expansin, cellulose-binding-like domain	GENE3D	2.60.40.760		coord: 147..242 score: 3.3
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Pollen_allerg_1	coord: 153..230 score: 1.1
IPR007117	Expansin, cellulose-binding-like domain	PROFILE	PS50843	EXPANSIN_CBD	coord: 162..241 score: 22
IPR007117	Expansin, cellulose-binding-like domain	unknown	SSF49590	PHL pollen allergen	coord: 149..240 score: 2.62
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 47..65 score: 2.3E-51coord: 69..87 score: 2.3E-51coord: 29..44 score: 2.3E-51coord: 189..203 score: 2.3E-51coord: 135..151 score: 2.3E-51coord: 227..241 score: 2.3
IPR009009	RlpA-like protein, double-psi beta-barrel domain	GENE3D	2.40.40.10		coord: 26..146 score: 8.9
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 65..142 score: 5.2
IPR009009	RlpA-like protein, double-psi beta-barrel domain	unknown	SSF50685	Barwin-like endoglucanases	coord: 29..170 score: 2.93
None	No IPR available	PANTHER	PTHR31867	FAMILY NOT NAMED	coord: 1..245 score: 2.0E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0045490	pectin catabolic process
cellular_component	GO:0005618	cell wall
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030570	pectate lyase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo08782	0.66	Barchart \| Table
Spo08297	0.65	Barchart \| Table
Spo16887	0.65	Barchart \| Table