Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTTTGAGTACCACCGGCACCATCACATGTGAAGGCTAATAAGTATTGGTGTACTTTGGTAGGTACTTAGCTAAATGAAGCACAATTTCATTAATTTCACCACCCAATTCTTAACATCTTCATAGTACACCCTTAATCTTGGGCCAACACCAAATTAAATAACCAAAATCATAAAGGAGGGCCAATATTTATTAGTAAATTTGAATGTTATAAGACAGTTGAGCTAATATCTAGCCTCTAAATTTAAAGCCACTGACAAAAATCTTGCCTATATAAACTCACATTATATGATATTAGCATTATATCATTTCATAGCATATCTTTAGAGAGTATATAATAATGGCTTCTATTGGAAACCTTGAGGTAGATGTGGAAGTGAAGAGCAACCCAGAGAAGTTCTGGAACGGTATTAGGGATTCCGACAAGATATTTCCGACGGCTTTCCCTGAGCTTTACAAGAGCATTGAGATCCTTGAAGGTGATGGTAAAGCTGTCGGATCGGTTCGCCTCGTTAAATTTGCTGAAGGTACTCTAAACTTATCTTATTACACGTACGTACAATGTAGTTGTTTATTTTCTACTCAGAACATTATTCGCAACTAAACTAGTTGACATCCGTCATTTTTAAATTTACAGGACTCCCCATGGTTAGCATGTGCAAGGAGAAGGTGGAAGTGGTTGATGAGGAGAAAAAGACAGTAGGATACTCGATTGTTGAAGGTGATGTGCTTAGTTTCTACAAGAGTTTCAAGGCACAACTAGTGGTTGAACCAAAGGAGGAAGGAAGTTTGGTGAAATGGACATGTGAGTTTGAGAAGTCCAAAGATGATGCTCCTGATCCTGAAATCATTTTCAAGGCTTTTGCTGTCAAAACTTTCCAAGACCTTGATGCTTATCTCATTAAGGCTAATTAATTAACTAATTCGATCTCTCAGTTACTATATGCATGCATATGACAGCATATACTCCGTATTACATACAGTATGGTATTGCTGAATAAAAATCTAGAATTGTGCCACGCTACACGTAAGTTAATTTCGAGTTGATTATGTTAATTGATCTGATTAATTAACGAGATTTTAAAGTTGTGCAACTGTTTTAGTATTAGTGGTATATAGCGGTACATGATATTCTATGCGCTAATTAGGAAAAACAAACAAGAAATGAACCAACAACCCAAGCATTGAATTAACTACAAGAATAAAATAATCTGATATAATGCAACAATATTCAGTAATCAGTAGTTCATTACCCCAGTAAAAAATTGTAATCACACCAGTAGTATGATCTGTTAAATGTTAATAACAAAACATAATCAAGAAGCGAAAAATCATTAAGAGACTTGATCACAGTACATAGGAGTACAGGACGACCAATCATAGGATACTGGATAATAACATTGTGGAGGGAAATTATCAGCAAATCCTGACCCTTGATTACAGTAGCCGAAACTAGCCAATCCCGACCCTTGATTAAAGTAGCTATGACCCGTCATTGGAGATGATTGTACATGATAATTATTACCAAATCCTGACCCTTGATCACCACAGTAGATAGAACTATCCATCACAGGAAGACATTGCAGAGGATTATTATCAGCAAATCCTGGCCCTTGATCACCACAGTCGATAGAACGATCCATCACAGGAAGGCATTCCGGAGGATTAATATCAGAAAATCCTGGCCCTTGATCACCACAGTTAATAGATTCATCCATCACAGGAAGGCGTTGCAGAGGATAATTGTCAGAAAATCCTGACCCTTGATCATCATAGTAGCTAGGAGTAGGATCCATCAGATCTACTAGATCATAGACCCCGCCATAATCAGCTTCAATTGGCGCCACTTGATCACTCAAAACCCC TGTTTGAGTACCACCGGCACCATCACATGTGAAGGCTAATAAGTATTGGTGTACTTTGGTAGGTACTTAGCTAAATGAAGCACAATTTCATTAATTTCACCACCCAATTCTTAACATCTTCATAGTACACCCTTAATCTTGGGCCAACACCAAATTAAATAACCAAAATCATAAAGGAGGGCCAATATTTATTAGTAAATTTGAATGTTATAAGACAGTTGAGCTAATATCTAGCCTCTAAATTTAAAGCCACTGACAAAAATCTTGCCTATATAAACTCACATTATATGATATTAGCATTATATCATTTCATAGCATATCTTTAGAGAGTATATAATAATGGCTTCTATTGGAAACCTTGAGGTAGATGTGGAAGTGAAGAGCAACCCAGAGAAGTTCTGGAACGGTATTAGGGATTCCGACAAGATATTTCCGACGGCTTTCCCTGAGCTTTACAAGAGCATTGAGATCCTTGAAGGTGATGGTAAAGCTGTCGGATCGGTTCGCCTCGTTAAATTTGCTGAAGGACTCCCCATGGTTAGCATGTGCAAGGAGAAGGTGGAAGTGGTTGATGAGGAGAAAAAGACAGTAGGATACTCGATTGTTGAAGGTGATGTGCTTAGTTTCTACAAGAGTTTCAAGGCACAACTAGTGGTTGAACCAAAGGAGGAAGGAAGTTTGGTGAAATGGACATGTGAGTTTGAGAAGTCCAAAGATGATGCTCCTGATCCTGAAATCATTTTCAAGGCTTTTGCTGTCAAAACTTTCCAAGACCTTGATGCTTATCTCATTAAGGCTAATTAATTAACTAATTCGATCTCTCAGTTACTATATGCATGCATATGACAGCATATACTCCGTATTACATACAGTATGGTATTGCTGAATAAAAATCTAGAATTGTGCCACGCTACACGTAAGTTAATTTCGAGTTGATTATGTTAATTGATCTGATTAATTAACGAGATTTTAAAGTTGTGCAACTGTTTTAGTATTAGTGGTATATAGCGGTACATGATATTCTATGCGCTAATTAGGAAAAACAAACAAGAAATGAACCAACAACCCAAGCATTGAATTAACTACAAGAATAAAATAATCTGATATAATGCAACAATATTCAGTAATCAGTAGTTCATTACCCCAGTAAAAAATTGTAATCACACCAGTAGTATGATCTGTTAAATGTTAATAACAAAACATAATCAAGAAGCGAAAAATCATTAAGAGACTTGATCACAGTACATAGGAGTACAGGACGACCAATCATAGGATACTGGATAATAACATTGTGGAGGGAAATTATCAGCAAATCCTGACCCTTGATTACAGTAGCCGAAACTAGCCAATCCCGACCCTTGATTAAAGTAGCTATGACCCGTCATTGGAGATGATTGTACATGATAATTATTACCAAATCCTGACCCTTGATCACCACAGTAGATAGAACTATCCATCACAGGAAGACATTGCAGAGGATTATTATCAGCAAATCCTGGCCCTTGATCACCACAGTCGATAGAACGATCCATCACAGGAAGGCATTCCGGAGGATTAATATCAGAAAATCCTGGCCCTTGATCACCACAGTTAATAGATTCATCCATCACAGGAAGGCGTTGCAGAGGATAATTGTCAGAAAATCCTGACCCTTGATCATCATAGTAGCTAGGAGTAGGATCCATCAGATCTACTAGATCATAGACCCCGCCATAATCAGCTTCAATTGGCGCCACTTGATCACTCAAAACCCC ATGGCTTCTATTGGAAACCTTGAGGTAGATGTGGAAGTGAAGAGCAACCCAGAGAAGTTCTGGAACGGTATTAGGGATTCCGACAAGATATTTCCGACGGCTTTCCCTGAGCTTTACAAGAGCATTGAGATCCTTGAAGGTGATGGTAAAGCTGTCGGATCGGTTCGCCTCGTTAAATTTGCTGAAGGACTCCCCATGGTTAGCATGTGCAAGGAGAAGGTGGAAGTGGTTGATGAGGAGAAAAAGACAGTAGGATACTCGATTGTTGAAGGTGATGTGCTTAGTTTCTACAAGAGTTTCAAGGCACAACTAGTGGTTGAACCAAAGGAGGAAGGAAGTTTGGTGAAATGGACATGTGAGTTTGAGAAGTCCAAAGATGATGCTCCTGATCCTGAAATCATTTTCAAGGCTTTTGCTGTCAAAACTTTCCAAGACCTTGATGCTTATCTCATTAAGGCTAATTAA MASIGNLEVDVEVKSNPEKFWNGIRDSDKIFPTAFPELYKSIEILEGDGKAVGSVRLVKFAEGLPMVSMCKEKVEVVDEEKKTVGYSIVEGDVLSFYKSFKAQLVVEPKEEGSLVKWTCEFEKSKDDAPDPEIIFKAFAVKTFQDLDAYLIKAN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo10638.1 vs. NCBI nr
Match: gi|902236610|gb|KNA24457.1| (hypothetical protein SOVF_015610 [Spinacia oleracea]) HSP 1 Score: 309.3 bits (791), Expect = 3.800e-81 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1
BLAST of Spo10638.1 vs. NCBI nr
Match: gi|731342863|ref|XP_010682610.1| (PREDICTED: MLP-like protein 423 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 255.8 bits (652), Expect = 5.000e-65 Identity = 126/152 (82.89%), Postives = 139/152 (91.45%), Query Frame = 1
BLAST of Spo10638.1 vs. NCBI nr
Match: gi|697098884|ref|XP_009629007.1| (PREDICTED: MLP-like protein 423 [Nicotiana tomentosiformis]) HSP 1 Score: 201.1 bits (510), Expect = 1.400e-48 Identity = 93/153 (60.78%), Postives = 121/153 (79.08%), Query Frame = 1
BLAST of Spo10638.1 vs. NCBI nr
Match: gi|698485080|ref|XP_009789323.1| (PREDICTED: MLP-like protein 423 [Nicotiana sylvestris]) HSP 1 Score: 200.3 bits (508), Expect = 2.500e-48 Identity = 91/153 (59.48%), Postives = 121/153 (79.08%), Query Frame = 1
BLAST of Spo10638.1 vs. NCBI nr
Match: gi|746263065|ref|WP_039311068.1| (hypothetical protein [Paenibacillus sp. IHB B 3415]) HSP 1 Score: 199.5 bits (506), Expect = 4.200e-48 Identity = 94/150 (62.67%), Postives = 119/150 (79.33%), Query Frame = 1
BLAST of Spo10638.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S002_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_015610 PE=3 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 2.600e-81 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1
BLAST of Spo10638.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C0L5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g149380 PE=4 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 3.500e-65 Identity = 126/152 (82.89%), Postives = 139/152 (91.45%), Query Frame = 1
BLAST of Spo10638.1 vs. UniProtKB/TrEMBL
Match: A0A0B2F0Z4_9BACL (Uncharacterized protein OS=Paenibacillus sp. IHB B 3415 GN=QW71_36290 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 2.900e-48 Identity = 94/150 (62.67%), Postives = 119/150 (79.33%), Query Frame = 1
BLAST of Spo10638.1 vs. UniProtKB/TrEMBL
Match: M0ZYA5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400004131 PE=3 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 9.400e-47 Identity = 89/152 (58.55%), Postives = 120/152 (78.95%), Query Frame = 1
BLAST of Spo10638.1 vs. UniProtKB/TrEMBL
Match: A0A068TW24_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032066001 PE=3 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.000e-45 Identity = 93/147 (63.27%), Postives = 115/147 (78.23%), Query Frame = 1
BLAST of Spo10638.1 vs. ExPASy Swiss-Prot
Match: ML423_ARATH (MLP-like protein 423 OS=Arabidopsis thaliana GN=MLP423 PE=2 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 6.700e-38 Identity = 75/152 (49.34%), Postives = 106/152 (69.74%), Query Frame = 1
BLAST of Spo10638.1 vs. ExPASy Swiss-Prot
Match: MLP43_ARATH (MLP-like protein 43 OS=Arabidopsis thaliana GN=MLP43 PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 5.000e-17 Identity = 49/150 (32.67%), Postives = 85/150 (56.67%), Query Frame = 1
BLAST of Spo10638.1 vs. ExPASy Swiss-Prot
Match: ML146_PAPSO (Major latex protein 146 OS=Papaver somniferum GN=MLP146 PE=2 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.200e-15 Identity = 46/131 (35.11%), Postives = 77/131 (58.78%), Query Frame = 1
BLAST of Spo10638.1 vs. ExPASy Swiss-Prot
Match: ML149_PAPSO (Major latex protein 149 OS=Papaver somniferum GN=MLP149 PE=2 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.600e-15 Identity = 52/150 (34.67%), Postives = 88/150 (58.67%), Query Frame = 1
BLAST of Spo10638.1 vs. ExPASy Swiss-Prot
Match: MLP34_ARATH (MLP-like protein 34 OS=Arabidopsis thaliana GN=MLP34 PE=2 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.600e-15 Identity = 48/147 (32.65%), Postives = 80/147 (54.42%), Query Frame = 1
BLAST of Spo10638.1 vs. TAIR (Arabidopsis)
Match: AT1G24020.1 (MLP-like protein 423) HSP 1 Score: 158.3 bits (399), Expect = 3.800e-39 Identity = 75/152 (49.34%), Postives = 106/152 (69.74%), Query Frame = 1
BLAST of Spo10638.1 vs. TAIR (Arabidopsis)
Match: AT1G70890.1 (MLP-like protein 43) HSP 1 Score: 89.0 bits (219), Expect = 2.800e-18 Identity = 49/150 (32.67%), Postives = 85/150 (56.67%), Query Frame = 1
BLAST of Spo10638.1 vs. TAIR (Arabidopsis)
Match: AT5G28010.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 87.4 bits (215), Expect = 8.200e-18 Identity = 53/151 (35.10%), Postives = 88/151 (58.28%), Query Frame = 1
BLAST of Spo10638.1 vs. TAIR (Arabidopsis)
Match: AT1G70850.1 (MLP-like protein 34) HSP 1 Score: 84.0 bits (206), Expect = 9.100e-17 Identity = 48/147 (32.65%), Postives = 80/147 (54.42%), Query Frame = 1
BLAST of Spo10638.1 vs. TAIR (Arabidopsis)
Match: AT5G28000.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 83.6 bits (205), Expect = 1.200e-16 Identity = 48/149 (32.21%), Postives = 83/149 (55.70%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo10638.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo10638.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo10638.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo10638.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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