Spo10529 (gene)

Overview
NameSpo10529
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionChlorophyll a-b binding protein 1, chloroplastic (Chlorophyll a-b protein 140) (CAB-140) (LHCII type I CAB-1) (Precursor)
LocationSuper_scaffold_120 : 357512 .. 358315 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCTCAACAATGGCTCTTTCTTCCCCGGCCTTTGGCGGTAAGGCGGTTAAGCTTAACCCAAGCACCTCCGACATGATTGGTGAGGGAAGGATCAGCATGAGGAAGTCAGCTGGGAAGCCCAAGAATGTATCATCAGGAAGCCCATGGTACGGTCCCGACCGTGTTAAGTACTTGGGCCCATTCTCCGGTGAGGCTCCATCCTACCTTACTGGTGAGTTCCCAGGTGACTACGGTTGGGACACTGCTGGGCTTTCTGCTGACCCAGAAACCTTCTCTAAGAACCGTGAGCTTGAGGTGATCCACTGCAGATGGGCTATGTTGGGAGCTTTGGGCTGTGTTTTCCCAGAGCTTTTGGCCCGTAATGGTGTTAAGTTTGGTGAAGCTGTTTGGTTTAAGGCTGGATCACAAATCTTTAGCGAAGGTGGACTTGACTACTTGGGTAACCCAAGTTTGGTTCATGCACAAAGTATTCTTGCTATTTGGGCTTGCCAAGTTATCTTGATGGGTGCTGTTGAAGGTTACCGTGTTGCTGGTGGGCCACTTGGTGAGGTTGTTGACCCACTTTACCCTGGTGGTAGCTTTGACCCATTGGGTTTGGCTGAAGACCCAGAGGCTTTTGCCGAATTGAAGGTAAAGGAGATCAAGAATGGTAGATTAGCTATGTTTTCAATGTTCGGATTCTTTGTTCAAGCTATTGTTACCGGAAAGGGCCCATTGGAGAACCTTGCTGACCATCTTGCCGACCCGGTTAACAACAACGCTTGGAACTTTGCCACCAACTTCGTTCCCGGCAACTGA

mRNA sequence

ATGGCTTCCTCAACAATGGCTCTTTCTTCCCCGGCCTTTGGCGGTAAGGCGGTTAAGCTTAACCCAAGCACCTCCGACATGATTGGTGAGGGAAGGATCAGCATGAGGAAGTCAGCTGGGAAGCCCAAGAATGTATCATCAGGAAGCCCATGGTACGGTCCCGACCGTGTTAAGTACTTGGGCCCATTCTCCGGTGAGGCTCCATCCTACCTTACTGGTGAGTTCCCAGGTGACTACGGTTGGGACACTGCTGGGCTTTCTGCTGACCCAGAAACCTTCTCTAAGAACCGTGAGCTTGAGGTGATCCACTGCAGATGGGCTATGTTGGGAGCTTTGGGCTGTGTTTTCCCAGAGCTTTTGGCCCGTAATGGTGTTAAGTTTGGTGAAGCTGTTTGGTTTAAGGCTGGATCACAAATCTTTAGCGAAGGTGGACTTGACTACTTGGGTAACCCAAGTTTGGTTCATGCACAAAGTATTCTTGCTATTTGGGCTTGCCAAGTTATCTTGATGGGTGCTGTTGAAGGTTACCGTGTTGCTGGTGGGCCACTTGGTGAGGTTGTTGACCCACTTTACCCTGGTGGTAGCTTTGACCCATTGGGTTTGGCTGAAGACCCAGAGGCTTTTGCCGAATTGAAGGTAAAGGAGATCAAGAATGGTAGATTAGCTATGTTTTCAATGTTCGGATTCTTTGTTCAAGCTATTGTTACCGGAAAGGGCCCATTGGAGAACCTTGCTGACCATCTTGCCGACCCGGTTAACAACAACGCTTGGAACTTTGCCACCAACTTCGTTCCCGGCAACTGA

Coding sequence (CDS)

ATGGCTTCCTCAACAATGGCTCTTTCTTCCCCGGCCTTTGGCGGTAAGGCGGTTAAGCTTAACCCAAGCACCTCCGACATGATTGGTGAGGGAAGGATCAGCATGAGGAAGTCAGCTGGGAAGCCCAAGAATGTATCATCAGGAAGCCCATGGTACGGTCCCGACCGTGTTAAGTACTTGGGCCCATTCTCCGGTGAGGCTCCATCCTACCTTACTGGTGAGTTCCCAGGTGACTACGGTTGGGACACTGCTGGGCTTTCTGCTGACCCAGAAACCTTCTCTAAGAACCGTGAGCTTGAGGTGATCCACTGCAGATGGGCTATGTTGGGAGCTTTGGGCTGTGTTTTCCCAGAGCTTTTGGCCCGTAATGGTGTTAAGTTTGGTGAAGCTGTTTGGTTTAAGGCTGGATCACAAATCTTTAGCGAAGGTGGACTTGACTACTTGGGTAACCCAAGTTTGGTTCATGCACAAAGTATTCTTGCTATTTGGGCTTGCCAAGTTATCTTGATGGGTGCTGTTGAAGGTTACCGTGTTGCTGGTGGGCCACTTGGTGAGGTTGTTGACCCACTTTACCCTGGTGGTAGCTTTGACCCATTGGGTTTGGCTGAAGACCCAGAGGCTTTTGCCGAATTGAAGGTAAAGGAGATCAAGAATGGTAGATTAGCTATGTTTTCAATGTTCGGATTCTTTGTTCAAGCTATTGTTACCGGAAAGGGCCCATTGGAGAACCTTGCTGACCATCTTGCCGACCCGGTTAACAACAACGCTTGGAACTTTGCCACCAACTTCGTTCCCGGCAACTGA

Protein sequence

MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGN
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo10529.1Spo10529.1mRNA


Homology
[Close]
BLAST of Spo10529.1 vs. NCBI nr
Match: gi|133917263|emb|CAJ77391.1| (major chlorophyll a/b binding protein LHCb1.1 [Spinacia oleracea])

HSP 1 Score: 551.6 bits (1420), Expect = 7.600e-154
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1 

		  

Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPGN 268
           LENLADHLADPVNNNAWNFATNFVPGN
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPGN 267
[Close]
BLAST of Spo10529.1 vs. NCBI nr
Match: gi|133917261|emb|CAJ77390.1| (major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea])

HSP 1 Score: 528.1 bits (1359), Expect = 9.000e-147
Identity = 250/266 (93.98%), Postives = 262/266 (98.50%), Query Frame = 1 

		  

Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MASSTMALSSP+  GKA+KL P+ S+++GEGR++MRK+AGKPKNVSSGSPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAIKLGPTASEILGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAW+FATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWSFATNFVPG 266
[Close]
BLAST of Spo10529.1 vs. NCBI nr
Match: gi|902212423|gb|KNA16961.1| (hypothetical protein SOVF_084380 [Spinacia oleracea])

HSP 1 Score: 524.2 bits (1349), Expect = 1.300e-145
Identity = 250/266 (93.98%), Postives = 259/266 (97.37%), Query Frame = 1 

		  

Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MASSTMALSSP+  GKAVKL P+ S++IGEGRI+MRK+AGKPK V S SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAWNFATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPG 266
[Close]
BLAST of Spo10529.1 vs. NCBI nr
Match: gi|283549609|emb|CAX64458.1| (major chlorophyll a/b binding protein LHCb1.4 precursor [Spinacia oleracea])

HSP 1 Score: 523.1 bits (1346), Expect = 2.900e-145
Identity = 247/266 (92.86%), Postives = 261/266 (98.12%), Query Frame = 1 

		  

Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MAS++MALSSP+  GKA+KL P+ S+++ EGR++MRK+AGKPKNVSSGSPWYGPDRVKYL
Sbjct: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAW+FATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWSFATNFVPG 266
[Close]
BLAST of Spo10529.1 vs. NCBI nr
Match: gi|115780|sp|P12333.1|CB2A_SPIOL (RecName: Full=Chlorophyll a-b binding protein, chloroplastic; AltName: Full=LHCII type I CAB; Short=LHCP; Flags: Precursor)

HSP 1 Score: 523.1 bits (1346), Expect = 2.900e-145
Identity = 249/266 (93.61%), Postives = 259/266 (97.37%), Query Frame = 1 

		  

Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MASSTMALSSP+  GKAVKL P+ S++IGEGRI+MRK+AGKPK V S SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAWNFATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPG 266
[Close]
BLAST of Spo10529.1 vs. UniProtKB/TrEMBL
Match: A4F3R4_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea GN=lhcb1.1 PE=3 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 5.300e-154
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1 

		  

Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPGN 268
           LENLADHLADPVNNNAWNFATNFVPGN
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPGN 267
[Close]
BLAST of Spo10529.1 vs. UniProtKB/TrEMBL
Match: A4F3R3_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea GN=lhcb1.2 PE=3 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 6.200e-147
Identity = 250/266 (93.98%), Postives = 262/266 (98.50%), Query Frame = 1 

		  

Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MASSTMALSSP+  GKA+KL P+ S+++GEGR++MRK+AGKPKNVSSGSPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAIKLGPTASEILGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAW+FATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWSFATNFVPG 266
[Close]
BLAST of Spo10529.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBU9_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea GN=SOVF_084380 PE=3 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 9.000e-146
Identity = 250/266 (93.98%), Postives = 259/266 (97.37%), Query Frame = 1 

		  

Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MASSTMALSSP+  GKAVKL P+ S++IGEGRI+MRK+AGKPK V S SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAWNFATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPG 266
[Close]
BLAST of Spo10529.1 vs. UniProtKB/TrEMBL
Match: B3WFZ6_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea GN=lhcb1.3 PE=3 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 2.000e-145
Identity = 249/266 (93.61%), Postives = 259/266 (97.37%), Query Frame = 1 

		  

Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MASSTMALSSP+  GKAVKL P+ S++IGEGRI+MRK+AGKPK V S SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAWNFATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPG 266
[Close]
BLAST of Spo10529.1 vs. UniProtKB/TrEMBL
Match: D2T2F7_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea GN=lhcb1.4 PE=3 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 2.000e-145
Identity = 247/266 (92.86%), Postives = 261/266 (98.12%), Query Frame = 1 

		  

Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MAS++MALSSP+  GKA+KL P+ S+++ EGR++MRK+AGKPKNVSSGSPWYGPDRVKYL
Sbjct: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAW+FATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWSFATNFVPG 266
[Close]
BLAST of Spo10529.1 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 1.800e-147
Identity = 249/266 (93.61%), Postives = 259/266 (97.37%), Query Frame = 1 

		  

Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MASSTMALSSP+  GKAVKL P+ S++IGEGRI+MRK+AGKPK V S SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAWNFATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPG 266
[Close]
BLAST of Spo10529.1 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 2.200e-145
Identity = 245/266 (92.11%), Postives = 259/266 (97.37%), Query Frame = 1 

		  

Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MA+STMALSSP+F GKAVKL+PS+S++ G G+++MRK+A K K VSSGSPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAW +ATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPG 266
[Close]
BLAST of Spo10529.1 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 1.200e-143
Identity = 243/266 (91.35%), Postives = 256/266 (96.24%), Query Frame = 1 

		  

Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MA+STMALSS  F GKAVKL+PS+S++ G GR++MRK+A K K  SSGSPWYGPDRVKYL
Sbjct: 1   MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAW FATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPG 266
[Close]
BLAST of Spo10529.1 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 2.700e-143
Identity = 244/266 (91.73%), Postives = 258/266 (96.99%), Query Frame = 1 

		  

Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MA+ST ALSSP F GKAVKL+PS+S++ G G+++MRK+A K K VSSGSPWYGPDRVKYL
Sbjct: 1   MAASTTALSSP-FAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAW++ATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWSYATNFVPG 265
[Close]
BLAST of Spo10529.1 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 1.300e-142
Identity = 240/266 (90.23%), Postives = 257/266 (96.62%), Query Frame = 1 

		  

Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MA++TMALSS +F GKAVKL+PS+S++ G G+++MRK+  K K +SSGSPWYGPDRVKYL
Sbjct: 1   MAAATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVK IKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAW++ATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWSYATNFVPG 266
[Close]
BLAST of Spo10529.1 vs. TAIR (Arabidopsis)
Match: AT1G29930.1 (chlorophyll A/B binding protein 1)

HSP 1 Score: 483.4 bits (1243), Expect = 8.900e-137
Identity = 235/267 (88.01%), Postives = 250/267 (93.63%), Query Frame = 1 

		  

Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MA+STMALSSPAF GKAVKL+P+ S+++G GR++MRK+  KPK   SGSPWYG DRVKYL
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 NGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWNFATNFVPG 267
           P+ENLADHLADPVNNNAW FATNFVPG
Sbjct: 241 PIENLADHLADPVNNNAWAFATNFVPG 266
[Close]
BLAST of Spo10529.1 vs. TAIR (Arabidopsis)
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2)

HSP 1 Score: 481.5 bits (1238), Expect = 3.400e-136
Identity = 234/267 (87.64%), Postives = 249/267 (93.26%), Query Frame = 1 

		  

Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MA+STMALSSPAF GKAV L+P+ S+++G GR++MRK+  KPK   SGSPWYG DRVKYL
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 NGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWNFATNFVPG 267
           P+ENLADHLADPVNNNAW FATNFVPG
Sbjct: 241 PIENLADHLADPVNNNAWAFATNFVPG 266
[Close]
BLAST of Spo10529.1 vs. TAIR (Arabidopsis)
Match: AT1G29910.1 (chlorophyll A/B binding protein 3)

HSP 1 Score: 481.5 bits (1238), Expect = 3.400e-136
Identity = 234/267 (87.64%), Postives = 249/267 (93.26%), Query Frame = 1 

		  

Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MA+STMALSSPAF GKAV L+P+ S+++G GR++MRK+  KPK   SGSPWYG DRVKYL
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 NGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWNFATNFVPG 267
           P+ENLADHLADPVNNNAW FATNFVPG
Sbjct: 241 PIENLADHLADPVNNNAWAFATNFVPG 266
[Close]
BLAST of Spo10529.1 vs. TAIR (Arabidopsis)
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2)

HSP 1 Score: 479.2 bits (1232), Expect = 1.700e-135
Identity = 237/267 (88.76%), Postives = 247/267 (92.51%), Query Frame = 1 

		  

Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MASSTMALSSPAF GKAVK  P+ SD++G GR++MRK+  KPK   SGSPWYG DRVKYL
Sbjct: 1   MASSTMALSSPAFAGKAVK--PAASDVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 DGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWNFATNFVPG 267
           PLENLADHLADPVNNNAW FATNFVPG
Sbjct: 241 PLENLADHLADPVNNNAWAFATNFVPG 264
[Close]
BLAST of Spo10529.1 vs. TAIR (Arabidopsis)
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1)

HSP 1 Score: 473.8 bits (1218), Expect = 7.100e-134
Identity = 236/267 (88.39%), Postives = 246/267 (92.13%), Query Frame = 1 

		  

Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MA+STMALSSPA  GKAVKL+P+ S++ G GRI+MRK A KP    SGSPWYG DRVKYL
Sbjct: 1   MAASTMALSSPALTGKAVKLSPAASEVFGTGRITMRK-ASKPTG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 DGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWNFATNFVPG 267
           PLENLADHLADPVNNNAW FATNFVPG
Sbjct: 241 PLENLADHLADPVNNNAWAFATNFVPG 265
The following BLAST results are available for this feature:
BLAST of Spo10529.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|133917263|emb|CAJ77391.1|7.6e-154100.major chlorophyll a/b binding ... [more]
gi|133917261|emb|CAJ77390.1|9.0e-14793.9major chlorophyll a/b binding ... [more]
gi|902212423|gb|KNA16961.1|1.3e-14593.9hypothetical protein SOVF_0843... [more]
gi|283549609|emb|CAX64458.1|2.9e-14592.8major chlorophyll a/b binding ... [more]
gi|115780|sp|P12333.1|CB2A_SPIOL2.9e-14593.6RecName: Full=Chlorophyll a-b ... [more]
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BLAST of Spo10529.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A4F3R4_SPIOL5.3e-154100.Chlorophyll a-b binding protei... [more]
A4F3R3_SPIOL6.2e-14793.9Chlorophyll a-b binding protei... [more]
A0A0K9RBU9_SPIOL9.0e-14693.9Chlorophyll a-b binding protei... [more]
B3WFZ6_SPIOL2.0e-14593.6Chlorophyll a-b binding protei... [more]
D2T2F7_SPIOL2.0e-14592.8Chlorophyll a-b binding protei... [more]
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BLAST of Spo10529.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CB2A_SPIOL1.8e-14793.6Chlorophyll a-b binding protei... [more]
CB24_TOBAC2.2e-14592.1Chlorophyll a-b binding protei... [more]
CB2G_SOLLC1.2e-14391.3Chlorophyll a-b binding protei... [more]
CB21_TOBAC2.7e-14391.7Chlorophyll a-b binding protei... [more]
CB25_TOBAC1.3e-14290.2Chlorophyll a-b binding protei... [more]
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BLAST of Spo10529.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G29930.18.9e-13788.0chlorophyll A/B binding protei... [more]
AT1G29920.13.4e-13687.6chlorophyll A/B-binding protei... [more]
AT1G29910.13.4e-13687.6chlorophyll A/B binding protei... [more]
AT2G34420.11.7e-13588.7photosystem II light harvestin... [more]
AT2G34430.17.1e-13488.3light-harvesting chlorophyll-p... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001344Chlorophyll A-B binding protein, plantPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 1..266
score: 2.1E
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 67..233
score: 4.0
IPR023329Chlorophyll a/b binding protein domainGENE3D1.10.3460.10coord: 60..258
score: 8.5
IPR023329Chlorophyll a/b binding protein domainunknownSSF103511Chlorophyll a-b binding proteincoord: 50..264
score: 2.35
NoneNo IPR availablePANTHERPTHR21649:SF26CHLOROPHYLL A-B BINDING PROTEIN 1, CHLOROPLASTIC-RELATEDcoord: 1..266
score: 2.1E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009765 photosynthesis, light harvesting
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0055085 transmembrane transport
biological_process GO:0008643 carbohydrate transport
biological_process GO:0009735 response to cytokinin
biological_process GO:0006506 GPI anchor biosynthetic process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
cellular_component GO:0010287 plastoglobule
cellular_component GO:0009543 chloroplast thylakoid lumen
cellular_component GO:0009512 cytochrome b6f complex
cellular_component GO:0030076 light-harvesting complex
cellular_component GO:0030093 chloroplast photosystem I
cellular_component GO:0016020 membrane
cellular_component GO:0009523 photosystem II
cellular_component GO:0022626 cytosolic ribosome
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009522 photosystem I
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005351 carbohydrate:proton symporter activity
molecular_function GO:0016758 transferase activity, transferring hexosyl groups
RNA-Seq Expression