Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATCAACAGACAATTGATACCGATACCTAATTAGTAACCATGGATTAAAAATGAGTTAAGTCAAAATAGACAGTAACAAAGCAAGTGCACCGCAGTTGATAAACCCTCCCCGGATGAAAAACCATTTCCAAACATTTCAGTCGATCCCCAGAAATTCAATTCCATTCAATCAAACCTTCAAATCCCGTTATTCCTGAATCAATGGCTTCAAACATCATAAGAAACTCCCTAAAATCAATCAACTCACAAACCCTACGAACCCTAACCAATCACCGCCGGACATTCACCGTCGCAGCAGCCACCTCCACCACTTCCACCGAAGAATCCGATGCATTTACCTTCTCATCAGGCGGCGGAGACAGTAGCATACACCTGAGGGCGGCAAAGAAGGAAGCGGCGTCGACAGTGACGATGCCAATGTCGTTCATGACAGGGTCAATTGTCGGAAAGAGATTCTACAAGAAAGTGACGACGAGAGAAGCTGAAGATGGGAATGGGTGGAGTGTAATGCTTGATTATCGTACCCTAAAAACCCCTTCCAAACGTCCCCTTAAACTTCCCACTATCTCTCTTGCTAAAGCCATTGCTGCTGAGTGGGATTTCCAGGTTACTTCATCTCCTCTCTCTTTTCATAGATCGGAATTTTGAGGTGATCATGTTTGTTATTTTCTTTTAATGAGCTAGGATGTGAATTGGGTATTCGGAGATGATGTTAATTTGTTGGGTTGCTGCACAATTCTTGTCAGCATTTATAATTTATCTTTTGGTTCTGTTATTGCTCTTGTGAGATTGGTACTGAGTATTTGTGTTTTGATGTTGTTTGAGTTGGGTTTTGGTGTTAATTGAATTTCGGGTTTGTTTGGTATTATTTGTAGCAAACAGATGGAATAAGACCCTTCACAATGCCACTCATGAAGCTTGCTTGTACTGCATTAGAACGAGTTCCTGTGGTTCGCCCGAAAATAATCGATAATTTGATGAGCAAATTCAATCAAGACTTAGTTTTTTGTCGAGCTCCAAATGACAATGAGTTAACCATCGGTGTCTATGGTATGGCCCTAGTTTTGATCACCCTCTCTTGTTTTAATGCGTACATGTGATGTTTATCCATGCTTGTGTACAAATTTGATGGTAATTGATGACATTCTATTGCCGAGGGCCGGTCCTCTATGCTTGTGGAGCTGGACTGTTGGAGAACAATAGTAATATAGTAGCACTCATGAGACAATAATGCGTATTTATATAGCTTTGTGTTCTTTTTATGAGCGCATTCTAGGTGCTCTGTTTGTGTTTGGTTGGCAAATACGAACGTTATAAGAAGTTAAGAGGGTGAAAGTAACACAATACAAGAGGAAGGGGATTAAGTAATGCAAGTTCATTTTCTGGTGAAGTATTCATGTAATATAAATAGACAATATAGCTTAAAGTAACTTAAACTCATTGTCTCTATAAAGACATGCTTGGATTGAGGTTAATGCATTATGGGGGTAATGAAGACAAAATAAATGGAATATATGAATTTAGCTATCGGTCTATAATCTCAAGGCGCACTAGCGTAGCCTTTGGTGCGCCTCGAAGTGAGGCACACTTAATAACTATAAAAAGTTGGTGAATAAAAGATGTGAGCTATAGGTGCACCTCTTTGAGTGCTCGCCTAGATTCAAAAAAAGTGCTTTACCCTATTCACCTTGCACCTAGGCACGTTTTTACCCCGTTTTTCATACACTTGTCACCCCCAAAATGAGGGTAATTCCCCCATATTCCCCTCCTTTTGACACAATCACTACCATATCCTATCAACCACCAACTCCATCCATTTCATTCCCTTTACTTTTCTTCTATTATGCCCCCAATTTAAGCATGCCCCAATTGGTAGTATATTACTCCATAGGCTTTGGTTGGAAACTTGGAATTACATGTTGGCAAGTTGTTGCTTCACTTCGCCTGTTTGACCCACTATTAATGTTAGCTCTTTGTATTGGTTGTTTATTCAGCTCATAGTAATAATTACCATAAAGATATTTGGTAAATTAGGTGTTAGATTACAGGCTTTCCATATGGATTAGTGGTTGGGAGTTGAATCCCTAACCTTTAGGTCCTGGGATCAAACAATAGTATCACTCTCTTTCTTTCTCTTTCTCTTTCTCTTTCTCTTTCTCTTTCTCTTTCTCTTTCTCTTTCTCTTTCTCTTTCTCTTTCTCTTTCTCTTTCTCTTTCTCTTTCTCTCTCTCTCTCTCTCTCTAAAATCAGTTATTAGCTAACCGCTGATTTTATACAATAGAACCAACTTTTGGAAAAACAGCCAATACTCGAGAAAGTGCTGTTGCAGTTATCTTGATTATTTGTGCTGAGAAGCCACATCAATCAATAACTTGAAAGCTGAAAGCCAATAAGAAATACTTCGTGTATCCAAAGTCAATTGCCAAACAAGACAATAACTTGGAACCTTTTCATTCGAGATCTAGTGTAACGACTTAGCATGGTTGCTGAAAGCTTTGAGTAATGTTATGTGAACTGTGCTGTGTGCTCATAATCTTTGAATATGTGTATGTATATTCAGAAGCATTTGATAATGGTCTTCTTAAACTGCCAGTCTAGAAATCAAGGTTTTTTCCTGTCAGTTGCTGAGCAGTCTTGACTCTCTTGAGGGGAGGACCAGAATGTGCTTTGAATTATATTTTTAACTTGACTCTGATTTTGTGCCCTGCTTCCATAGTTTTGAAAAGCGCACCCTAGGCTCAAGGCGCAAGTCCTGACGCCTCAGGCACCCTCGGAAGGCGTGCGCCTTTGCACCTTTTCCTAGGCGCATTGTTGACAAATGATATTTTCTTTTAAAAAGGCCAAAACCACGTGACTTTAATGGCTCTCTAACAGTTAGGATTTACTATATTGAAAAGAGGAGAGAGGAAACCCTAAAATTTTCCATTTTTCCTCGTCTTTTTCAGCAACGGCCGACATGTCATATAAACTCCTCTTTTTTTTTTTAATTTAAAGTAACTGTTTTATGTAAGGTGTGATACACTTCTTTTGAGAACCTAAATAAATTGTCAGTGACTAAAAAGTTACTTGAATCTTCCTATATCCCCCCGTTTGTTTGTTTTACTAAAGAGTTGCTTGAACCTTACTAAAAAGAGGAGTAATGATTGGTTGTAAGAAAAAGGTTGAAAAAGTAAGAAAGATGTAATAAATTATTGAGTAATAGCGGGTAAAGTAGGATAGAGATGATGAAAATGTGTAATTATTATGGGGAAAGGCGGGTAAGATTATAAAAAATGATTGCAAAAAATAGAATAAAGTAGAAGTGGATACATAAAAAAAGCACCTCTTTTTTAAAAGTGGATGCATTAAAAAAAAACAGGAGGGAGTACTATTTTGATTATTTTTCTCCCTGAAAGTAAATACCACAAAAGGTTTTTTTTTTTTTTTTTAAATGTGTGTCTAGGCTCCAGGGACTTTTGCTCCTTGGTGTGCCTCGCGCCTTTTAAAACTAAGCTTGCTTCATTGAACTATGAACATTGGTCTTTTTATATGGAATTTTCTATATTACTTAAATCGATGTTCCTAATCACACATTTACTCTGAAAATCTCTGCAGAACGCCAAGTTGAGAAAATAGATCCACTACTTAAGTGGGTGGAGTCAGAATTTGGGTACAAGCCTGTTGTGTACACCTGTTTTTATGGTGGCAAGCAGGATGAAGGTCTTGTAAAAGCCGTAGAAAGTCTATTGAAGAAAGCAGACGATTGTGAACTGGCAGCCATTGACGCATTGACATCCGCATCACATTCTTTAATTATCTCTATCGGTATAGTTCGTGGCAGGTTGCAAATTGAGGAGGCCATTGAGCTGATTCGTCTTGAAGAAGATCTGCAGGTTAGTGGCATCGGCTGTGTTCCTNCCCCCCCCCCCCCAAACCCGATCTAACCATGACTTGCTGCATCAATGAAGTTATTTTATAACTTACAAGTTCAAAAATCCTGTATGAGAAATATGTTTTGAGATCATGGCCTTTTGTTTCTAATTTCTGTAGGTGGACAAGTGGGGTCTAGTCGAGGGTGGTCATGATGTTGATGTTGCGGACCTGAAAGTGCAGATTGCATCAGCTGCTGTGTTCCTTTGGCTATCAAGGAGGGCATAGTATCTGCATTTTGATATATTTTTTTCAATCAAATGAGTTGATTGTGAATTGTGCATTTTTGTATGTTCCATTGGACGCTGTATTCACCTAATGACTACGAGCCGGAGCTTTTTTGTAAAACATGTGTAGCCTTTCCGAACTTAGTAAGTGTAATAATCTGCTTCGGCATTTCTTAGAATTTACACTTCTTTATTCTTTATATTTTGAATAATTACAAAAATTCCTCAAGACCACAAAAATAATCTGCTATGCTATTTGTGACATTTCCATCAAATTTAGTACTGTATTTTTAGTTAATTAGTCATGTACAATGAACAGAGAAGTATAAAACGGTTTGCAGCAAGCCGAAGCAGCTGGTTTTGTGGCAGATTAAGGATCTTCATTGCAGCACTGCACACATACTGGTGGTTGTTTGATGACACAATAACAGCATGTGGTATCAC AATCAACAGACAATTGATACCGATACCTAATTAGTAACCATGGATTAAAAATGAGTTAAGTCAAAATAGACAGTAACAAAGCAAGTGCACCGCAGTTGATAAACCCTCCCCGGATGAAAAACCATTTCCAAACATTTCAGTCGATCCCCAGAAATTCAATTCCATTCAATCAAACCTTCAAATCCCGTTATTCCTGAATCAATGGCTTCAAACATCATAAGAAACTCCCTAAAATCAATCAACTCACAAACCCTACGAACCCTAACCAATCACCGCCGGACATTCACCGTCGCAGCAGCCACCTCCACCACTTCCACCGAAGAATCCGATGCATTTACCTTCTCATCAGGCGGCGGAGACAGTAGCATACACCTGAGGGCGGCAAAGAAGGAAGCGGCGTCGACAGTGACGATGCCAATGTCGTTCATGACAGGGTCAATTGTCGGAAAGAGATTCTACAAGAAAGTGACGACGAGAGAAGCTGAAGATGGGAATGGGTGGAGTGTAATGCTTGATTATCGTACCCTAAAAACCCCTTCCAAACGTCCCCTTAAACTTCCCACTATCTCTCTTGCTAAAGCCATTGCTGCTGAGTGGGATTTCCAGCAAACAGATGGAATAAGACCCTTCACAATGCCACTCATGAAGCTTGCTTGTACTGCATTAGAACGAGTTCCTGTGGTTCGCCCGAAAATAATCGATAATTTGATGAGCAAATTCAATCAAGACTTAGTTTTTTGTCGAGCTCCAAATGACAATGAGTTAACCATCGGTGTCTATGAACGCCAAGTTGAGAAAATAGATCCACTACTTAAGTGGGTGGAGTCAGAATTTGGGTACAAGCCTGTTGTGTACACCTGTTTTTATGGTGGCAAGCAGGATGAAGGTCTTGTAAAAGCCGTAGAAAGTCTATTGAAGAAAGCAGACGATTGTGAACTGGCAGCCATTGACGCATTGACATCCGCATCACATTCTTTAATTATCTCTATCGGTATAGTTCGTGGCAGGTTGCAAATTGAGGAGGCCATTGAGCTGATTCGTCTTGAAGAAGATCTGCAGGTGGACAAGTGGGGTCTAGTCGAGGGTGGTCATGATGTTGATGTTGCGGACCTGAAAGTGCAGATTGCATCAGCTGCTGTGTTCCTTTGGCTATCAAGGAGGGCATAGTATCTGCATTTTGATATATTTTTTTCAATCAAATGAGTTGATTGTGAATTGTGCATTTTTGTATGTTCCATTGGACGCTGTATTCACCTAATGACTACGAGCCGGAGCTTTTTTGTAAAACATGTGTAGCCTTTCCGAACTTAGTAAGTGTAATAATCTGCTTCGGCATTTCTTAGAATTTACACTTCTTTATTCTTTATATTTTGAATAATTACAAAAATTCCTCAAGACCACAAAAATAATCTGCTATGCTATTTGTGACATTTCCATCAAATTTAGTACTGTATTTTTAGTTAATTAGTCATGTACAATGAACAGAGAAGTATAAAACGGTTTGCAGCAAGCCGAAGCAGCTGGTTTTGTGGCAGATTAAGGATCTTCATTGCAGCACTGCACACATACTGGTGGTTGTTTGATGACACAATAACAGCATGTGGTATCAC ATGGCTTCAAACATCATAAGAAACTCCCTAAAATCAATCAACTCACAAACCCTACGAACCCTAACCAATCACCGCCGGACATTCACCGTCGCAGCAGCCACCTCCACCACTTCCACCGAAGAATCCGATGCATTTACCTTCTCATCAGGCGGCGGAGACAGTAGCATACACCTGAGGGCGGCAAAGAAGGAAGCGGCGTCGACAGTGACGATGCCAATGTCGTTCATGACAGGGTCAATTGTCGGAAAGAGATTCTACAAGAAAGTGACGACGAGAGAAGCTGAAGATGGGAATGGGTGGAGTGTAATGCTTGATTATCGTACCCTAAAAACCCCTTCCAAACGTCCCCTTAAACTTCCCACTATCTCTCTTGCTAAAGCCATTGCTGCTGAGTGGGATTTCCAGCAAACAGATGGAATAAGACCCTTCACAATGCCACTCATGAAGCTTGCTTGTACTGCATTAGAACGAGTTCCTGTGGTTCGCCCGAAAATAATCGATAATTTGATGAGCAAATTCAATCAAGACTTAGTTTTTTGTCGAGCTCCAAATGACAATGAGTTAACCATCGGTGTCTATGAACGCCAAGTTGAGAAAATAGATCCACTACTTAAGTGGGTGGAGTCAGAATTTGGGTACAAGCCTGTTGTGTACACCTGTTTTTATGGTGGCAAGCAGGATGAAGGTCTTGTAAAAGCCGTAGAAAGTCTATTGAAGAAAGCAGACGATTGTGAACTGGCAGCCATTGACGCATTGACATCCGCATCACATTCTTTAATTATCTCTATCGGTATAGTTCGTGGCAGGTTGCAAATTGAGGAGGCCATTGAGCTGATTCGTCTTGAAGAAGATCTGCAGGTGGACAAGTGGGGTCTAGTCGAGGGTGGTCATGATGTTGATGTTGCGGACCTGAAAGTGCAGATTGCATCAGCTGCTGTGTTCCTTTGGCTATCAAGGAGGGCATAG MASNIIRNSLKSINSQTLRTLTNHRRTFTVAAATSTTSTEESDAFTFSSGGGDSSIHLRAAKKEAASTVTMPMSFMTGSIVGKRFYKKVTTREAEDGNGWSVMLDYRTLKTPSKRPLKLPTISLAKAIAAEWDFQQTDGIRPFTMPLMKLACTALERVPVVRPKIIDNLMSKFNQDLVFCRAPNDNELTIGVYERQVEKIDPLLKWVESEFGYKPVVYTCFYGGKQDEGLVKAVESLLKKADDCELAAIDALTSASHSLIISIGIVRGRLQIEEAIELIRLEEDLQVDKWGLVEGGHDVDVADLKVQIASAAVFLWLSRRA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo10507.1 vs. NCBI nr
Match: gi|902238420|gb|KNA25182.1| (hypothetical protein SOVF_009000 [Spinacia oleracea]) HSP 1 Score: 622.9 bits (1605), Expect = 3.200e-175 Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 1
BLAST of Spo10507.1 vs. NCBI nr
Match: gi|731336187|ref|XP_010679120.1| (PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 523.5 bits (1347), Expect = 2.700e-145 Identity = 272/320 (85.00%), Postives = 297/320 (92.81%), Query Frame = 1
BLAST of Spo10507.1 vs. NCBI nr
Match: gi|731371623|ref|XP_010666098.1| (PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 520.8 bits (1340), Expect = 1.700e-144 Identity = 270/320 (84.38%), Postives = 295/320 (92.19%), Query Frame = 1
BLAST of Spo10507.1 vs. NCBI nr
Match: gi|870858749|gb|KMT10237.1| (hypothetical protein BVRB_5g119950 isoform B [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 484.6 bits (1246), Expect = 1.400e-133 Identity = 258/320 (80.62%), Postives = 283/320 (88.44%), Query Frame = 1
BLAST of Spo10507.1 vs. NCBI nr
Match: gi|870843094|gb|KMS96351.1| (hypothetical protein BVRB_9g225990 isoform C [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 481.9 bits (1239), Expect = 8.900e-133 Identity = 256/320 (80.00%), Postives = 281/320 (87.81%), Query Frame = 1
BLAST of Spo10507.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S238_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_009000 PE=4 SV=1) HSP 1 Score: 622.9 bits (1605), Expect = 2.200e-175 Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 1
BLAST of Spo10507.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F3C2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g119950 PE=4 SV=1) HSP 1 Score: 523.5 bits (1347), Expect = 1.800e-145 Identity = 272/320 (85.00%), Postives = 297/320 (92.81%), Query Frame = 1
BLAST of Spo10507.1 vs. UniProtKB/TrEMBL
Match: A0A0J8DZQ5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g225990 PE=4 SV=1) HSP 1 Score: 520.8 bits (1340), Expect = 1.200e-144 Identity = 270/320 (84.38%), Postives = 295/320 (92.19%), Query Frame = 1
BLAST of Spo10507.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C9H3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g119950 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 9.500e-134 Identity = 258/320 (80.62%), Postives = 283/320 (88.44%), Query Frame = 1
BLAST of Spo10507.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B5R8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g225990 PE=4 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 6.200e-133 Identity = 256/320 (80.00%), Postives = 281/320 (87.81%), Query Frame = 1
BLAST of Spo10507.1 vs. ExPASy Swiss-Prot
Match: ATPF2_HUMAN (ATP synthase mitochondrial F1 complex assembly factor 2 OS=Homo sapiens GN=ATPAF2 PE=1 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 7.200e-26 Identity = 79/261 (30.27%), Postives = 132/261 (50.57%), Query Frame = 1
BLAST of Spo10507.1 vs. ExPASy Swiss-Prot
Match: ATPF2_MOUSE (ATP synthase mitochondrial F1 complex assembly factor 2 OS=Mus musculus GN=Atpaf2 PE=1 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.600e-25 Identity = 76/238 (31.93%), Postives = 127/238 (53.36%), Query Frame = 1
BLAST of Spo10507.1 vs. ExPASy Swiss-Prot
Match: ATPF2_BOVIN (ATP synthase mitochondrial F1 complex assembly factor 2 OS=Bos taurus GN=ATPAF2 PE=2 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.400e-24 Identity = 75/237 (31.65%), Postives = 124/237 (52.32%), Query Frame = 1
BLAST of Spo10507.1 vs. ExPASy Swiss-Prot
Match: ATP12_SCHPO (Protein atp12, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=atp12 PE=3 SV=2) HSP 1 Score: 87.4 bits (215), Expect = 3.000e-16 Identity = 68/240 (28.33%), Postives = 120/240 (50.00%), Query Frame = 1
BLAST of Spo10507.1 vs. ExPASy Swiss-Prot
Match: ATP12_YEAST (Protein ATP12, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATP12 PE=1 SV=2) HSP 1 Score: 57.0 bits (136), Expect = 4.400e-7 Identity = 60/274 (21.90%), Postives = 114/274 (41.61%), Query Frame = 1
BLAST of Spo10507.1 vs. TAIR (Arabidopsis)
Match: AT5G40660.1 (ATP12 protein-related) HSP 1 Score: 384.4 bits (986), Expect = 6.800e-107 Identity = 204/324 (62.96%), Postives = 254/324 (78.40%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo10507.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo10507.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo10507.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo10507.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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