Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTATGATTTATTTTGTGATCTTTGATCTGGGTTTTGTTCCTTTTGTGAAATCTGGGATTTTTTAGGAGATGGGTATGAATTATTTGGTGATTTCTGATCTGGGTTTTGTGAATTTTTGAATTTTTGAGGAGATGGGTATGAATTGTTTTGTGATTTTTGATCTGGGTTTTGATTAATTTGTGAATTTGGAGTGTTTTTGGGAGGTTGGATTTTGATGGGTAAGCAAGAAACAACTATGAAAAGAGGATATGAAATGGGATGATCAAAAGAAAGAGGAGGTTTACCAAATGCAAAAAGCAAGAGTTTGAAATTAGCAAGCCAAGCAATGAAGAATGCAGTAAAGCCACAAAAATGAATAGAAGTGAGATTTAGTGGCAAAATTAGGAAGAGTGAGATAACTGGAAGTATTGGCACTAATCTTGTGAAACCCTTTGGAGTAATCTTGCCTATAACATAACAGTAACTCAATGACACAAATATTGATAACCATACCTTTCCTAAGTTTTTCAACTCATCTTGTGCTAATTCTACTACCATTGCTTCCAAAACTGTTGTGTCTGATTGATTTAGGTATTGGCCGGATAAATTTTGTTGTTGTCGTCGTTGTAATATCCCCTTTTTTCGCTCATCAGATCGATTTTGCTCCTCTTGAAGAATTTAGAAGTAGTGATTTTCAATGGAGTTGACAAAATATTGTGGTTGGTGTTTGATTATCTACGGAGTAGAACTTTAGACTAAAGAGTCAAAGAGACCCAAGGGCTTAGGCCAAAGTGGTTAGAAGGTGCTGGGAAATAGAATAACAACCACATTTTGTCTACTTTAGCAAAAAGTTATAGGGCGTTCTTCAATTGTCCATTGTGTTTTCTTCTTAATGTTGTTTTTTGACTTGAACAAGGACAGAGCATTGGAAGTTACTTGGATTGTTTTCTTTTGTGGTTTTCACGTGGGAAATTGTCTGGCCAAGGTGAGTTTGTTGCGTCGACACATTAATAGTCGTACTATATTCATTTTGTACACTATTTATGGATCACATGATGGCATATTATAGGTGTAATTTTTTTAAGTAGCAATTTAATATAATCCTAAATCTCACGCTGTAATCGTAGTTTTAATACTAGCAATCAGCTTTATTCTGGCTTACAATTCGACTTTTGACTGGGATCATATCGTGAACTATTACTTTCACTAAAGATTTTGATATCATGTAAAAGAAAATCAAATGCATGTAGCAGGGATTAGTGAATATCTATATGCATTTTTTGAGCTTCAACAGAAAGCCTAAAGTTTTGTTGGAAGGTTACAATGTGTATAGGAACTCATGACTGGCCCCAGTTTGTTCAGCAATTGGAGTGTTTTTGACTTATAGTTAACATTGCTGAGCTATTGGATATTGAACCTTGATCTATAAGGTGGAAGTGGGAGCATTAGTTTGGAAGCTCGTGTCTTTTGAAAAACCTAATTTTTATGGTTCTGACTACTTCTGTTCTGTTTTCAATTCATAACTAATGTCTAGCCATGATAAGTGATATTTTCCCAAGAGAAAGGTAGAGTAAACGGTTAGCAGTGTCAAGCCCTAACACTTTCCATTGAGCTATTATATGTTGATGGCACCATAGAGTCTAGACTTGAAAAATCACATGGCTAGGGCTCCTTACAACTTACAAAGAATATATCTGTAATTCTAGAATTCCCGTGCAAGGTATCATGGAAGTGGATTTGTTGCTTGCTATAAAGCCACGTCACAAAGATCATGATCGAAAAGTTTAATAGAAGGTCTTTATATTATTGATTCAATATCAAGCCATTTGGAGATCTCCTATGATAATTTAGCTCTGGTTTTTCTTCTCTAAAAACAACAAGGGTTGAAGCCTAAGCAAACACATAGGCCTTGATTTTATGGTGGTTTACGACAAATTCGGAAAGTATCACTTCTATGACTTTTAATCCTTTAATAAATGGTTTGCTGACTAAAGTTTGAAGGATCATGTTAATATTTCTGGAGCTGTTGGCCCTTTTTCTTCTTGAATTGTCTTTTGTTGCGATTTGTAAGCTATGTCATATTAACATGACATGAATTGTTGTAATATATGCTTCCCCACCCCCACCCCCACCCCACCCCACCCGTAACCCCCATATAAGTTTGCTCTGCACAACTTTTGCTTCAAGATTGTATTTCTTCCAAGATAAACTTTTCCATTTTAAGTTGAAAACTCTTGCTTCAGAAAGCTTACTGACTTTTTGGTTTGAATTTGAGTTTGCATTTATTTTTTGAAGATCTTTACCTTTTTTCTTATTGTTTTGCACTGACTTCTAGCCAACATGTGGGTTTCCGTCACCCTGCTATTTGGCAAGTGTAGAACCTATTACAGTAGTTTATGTCCACTAACTTACTTTGTATGTTTTTTTAAGGTGGTATCAGTCACTCCCTCCAATAAGCAAGGGTTACGGGACCCTATGTCTTCTGGTCACAACAGCATCTCAACTGAGTGTACTCAATCCTTACTATATTGCATTGCTCTATGGAAGAGTGTTCAAGAATTTTGAGGTACAGTTCACATTACCCTGTCATTTAGTACAGCATATAAATCTCTATTGATCTAACATATGCCTGTTAAACCCTCAATTCTATATTGTGTTTCATTAATATGGAGTATTTCATATAAATTGTCTTGTCTTCACAAATTGTTGCTCCCGACCCCTCTTATCAAATTTGTAACCCCAAACTCTGCTATAAAAAGTTCATTACAATTTGGGTACCTGCGGAAGGGCTTTAAGATTTTGAGACTACATGTGAAAATTCTGGGTTGATATGGGTTTTTTACCCAAATGAAATGGCAATGGGAGAGGCTTGGTAGGGTTGTCTTAGTTTTAGACAGCTGAAAAAGGGTAGCATATGTGGCCTTGTACTGATAACTGGTAAGTGGGGATCTGACTACCATCAAGGGAAGGGGAAGATGGGATGTGGGAGAAGGGTACTTGAGGCGTGATGAGGAGGGATAGGGCCCGGAAGGAAGATTGGGGGAACTTCACTAGAATTGAACTGTTGTTTGGGTAATTAGATACTCATATTTTTCCTAGTAAGGTTATAACCAAGGCAAGTTTAGTTTCTAGCACATTGACATATGTTAAGGGTGAAGTTGTTAAGACAGCTTTCCTAGACTGATTTAATTCCGTTTAATGGTGTACAGATCAAAAGTTTACTTCATTACCTTCTTTTCTTGTCTATAATTCCCTTTTCAAGTTTTTCCAATTATTTTCTTACTCACAAAGTTGTAAGCAACTTATTTATGAGTCACTGGTCCCATCATACCTCATTTCTGGTTGGTTTTACCTGATTGTTTACCTCTAACTAATACCTTTTTTAACAATTGTGCATTGGTTACCAGGTGTGGCGGCTTTTTACAAACTTCTTTTTCCTTGGTTTTTCTATCAACTTTGGAATTCGCCTGCTGATGATGTGAGTAGTTTGCCTGATCATAAATTTGAAGCGGAATTACTGCTTTTCTCTTTGTTTGTTCTTTTCATTTGGATGATTTGTCCCTTGTTTTTGGTTGGGGGGNGGGGGGGGGGGGGGGGGGGGGTTATTATCAGCGATTGGAAAACCACAAAAGCATGGGAATGGGAAACTCCCTCAGGTGCTAGTTTTGATTACCCATGTCATTTTATGCATAATGACCTGGTATCGATACAAATTTGTGAATGTTACAAATAAAAAGGGTACCCAGTTATTGAGTGGGCTTCTTCTCCAGATTCTATCATATTCAAGAACTCTTGGTCACCATCCTTCTGATTGCACGCATTTCGACAGTCACTAGTTTTGATTATTCTTTTTCCTTGATAAGTGGTATCAACATTTTGGATGACTTGAGAAGTTGAGAGGATGCTCATATGGGGTCCAGCCACGCCGAACTGCAAATAGCTAGATACCATGGGGTGCATGACATGAACGGCATGACATATTTTCCGTCTTTCCTTTTTTGGACTAGAGAGGGTGTTTATGTCTTTATGAGCCCCTGAAAACAGGGCTCTTTGATTGATTTCATTATACTCTAGATATAGAAGTGTTATTTCCCCCAAAAAATCTGATGCATAATGAAATTATGAATATGTTGAAAGTATGTAGTTTGTGTGTTTGTGTCTGTGATTTTTGCATTGCATATACAGAGGCCCATGAACTTTCTTTGCATTGTTATTCTTGGTCTATTTCCTCCTCCAAAATCATATGGTGGAGTAATTACAGTGCCTTTATCAATTATCATCTCTGTTACTTTTATGCTTTTCTTTGTTTTCCCTCATTTTTCATGATAATCACCTTCTTAGATGTTATAGCAAGGTACAGAGTTCTCTCTGAACACTCTCATATTCAATATTCCGTTTCCTTCTATAGTTAAAAAAAATCTTGGTTTTCTGTGGCCTGATGTATCGTACTCCTTTTGTCTTTTATAAAAATTCTTGATGTAACAGACCAAGATATGGAGTTCAATTGGAGCAGGGACCATTCCAGAGGCGGACAGCAGACTTCTTGTGGATGATGATATTTGGAGCATTCAGTTTGTTGGTAAAAGAATCATTGCATGTTTCAATTCTCTGCTCTATTGGCATGTCTGTTATCTTGTTTTCATTAAAAAGAAGTGTGCCTGGGGTTACTATGATTAATACTTAATAGCACCCACATTTATAGTTTTTCTTGGACTTTTCCTTCTGAGTTACACAGAAGTAGCCATTTAAAAATAGAAATAAGAGTTGCTGTTGTAGATGCAAGATAAAATGAGCATTAACACATCTGAAATAGATATTAGAGTTTCTCAGGTTGATGGATTTTGTTACCTTGAAGTTTGAGGGATTTTATTCCTATTCCCTGTCATTTACCCTCCTTTCCTCAATAGACATCAAATTTAGTTAATCATTACTCCAATTTAAATATCTATAACTATATACTAAAAGAGACACCAGGAATGACACGTGTCATCTCCTGGTGAATCCTTACTATTTTTCTTTTTTAAATTCCTTTTCATTAAATAATAACTATTATATCAAATATACTAGATACTTAAAAAAAAAAAAAAGATAAAATTCAATTTACAAAAGATTGTTTATAAAAAAAACGGTGGAGCTGCATTATCTTAAATTCCCTACAAAATAGCATAGAAAAGAATAAAAAGAGATCTAAAAATAATGTGTAGCTGCAATATCTTAAATTTAGGGAGAAAAAAATATACTTCGTATATTAGTTAGAGATTGCTGAGATAAATTAATCGGATAGTCTAAATGTACTAATATTAATATTAGTGCGATGTGTAACATTAATATAGGAAACCACAATAATACTTTCCATGTGGTTTCCATAAAATTAGTATATTCAATACGCTATTATTGTCATCAAAAAAAATACTCCGTATTAATGATTGCTGAGATAAATTCCTGTAACAGTATTATTTATTTTAGCTTCCAAAAATATAGGAAATCACATCAGCCAA ATGGAGCATTGGAAGTTACTTGGATTGTTTTCTTTTGTGGTTTTCACGTGGGAAATTGTCTGGCCAAGGTGGTATCAGTCACTCCCTCCAATAAGCAAGGGTTACGGGACCCTATGTCTTCTGGTCACAACAGCATCTCAACTGAGTGTACTCAATCCTTACTATATTGCATTGCTCTATGGAAGAGTGTTCAAGAATTTTGAGGTGTGGCGGCTTTTTACAAACTTCTTTTTCCTTGGTTTTTCTATCAACTTTGGAATTCGCCTGCTGATGATACCAAGATATGGAGTTCAATTGGAGCAGGGACCATTCCAGAGGCGGACAGCAGACTTCTTGTGGATGATGATATTTGGAGCATTCAGTTTGTTGGTAAAAGAATCATTGCATGTTTCAATTCTCTGCTCTATTGGCATGTCTGTTATCTTGTTTTCATTAAAAAGAAGTGTGCCTGGGGTTACTATGATTAATACTTAATAGCACCCACATTTATAGTTTTTCTTGGACTTTTCCTTCTGAGTTACACAGAAGTAGCCATTTAAAAATAGAAATAAGAGTTGCTGTTGTAGATGCAAGATAAAATGAGCATTAACACATCTGAAATAGATATTAGAGTTTCTCAGGTTGATGGATTTTGTTACCTTGAAGTTTGAGGGATTTTATTCCTATTCCCTGTCATTTACCCTCCTTTCCTCAATAGACATCAAATTTAGTTAATCATTACTCCAATTTAAATATCTATAACTATATACTAAAAGAGACACCAGGAATGACACGTGTCATCTCCTGGTGAATCCTTACTATTTTTCTTTTTTAAATTCCTTTTCATTAAATAATAACTATTATATCAAATATACTAGATACTTAAAAAAAAAAAAAAGATAAAATTCAATTTACAAAAGATTGTTTATAAAAAAAACGGTGGAGCTGCATTATCTTAAATTCCCTACAAAATAGCATAGAAAAGAATAAAAAGAGATCTAAAAATAATGTGTAGCTGCAATATCTTAAATTTAGGGAGAAAAAAATATACTTCGTATATTAGTTAGAGATTGCTGAGATAAATTAATCGGATAGTCTAAATGTACTAATATTAATATTAGTGCGATGTGTAACATTAATATAGGAAACCACAATAATACTTTCCATGTGGTTTCCATAAAATTAGTATATTCAATACGCTATTATTGTCATCAAAAAAAATACTCCGTATTAATGATTGCTGAGATAAATTCCTGTAACAGTATTATTTATTTTAGCTTCCAAAAATATAGGAAATCACATCAGCCAA ATGGAGCATTGGAAGTTACTTGGATTGTTTTCTTTTGTGGTTTTCACGTGGGAAATTGTCTGGCCAAGGTGGTATCAGTCACTCCCTCCAATAAGCAAGGGTTACGGGACCCTATGTCTTCTGGTCACAACAGCATCTCAACTGAGTGTACTCAATCCTTACTATATTGCATTGCTCTATGGAAGAGTGTTCAAGAATTTTGAGGTGTGGCGGCTTTTTACAAACTTCTTTTTCCTTGGTTTTTCTATCAACTTTGGAATTCGCCTGCTGATGATACCAAGATATGGAGTTCAATTGGAGCAGGGACCATTCCAGAGGCGGACAGCAGACTTCTTGTGGATGATGATATTTGGAGCATTCAGTTTGTTGGTAAAAGAATCATTGCATGTTTCAATTCTCTGCTCTATTGGCATGTCTGTTATCTTGTTTTCATTAAAAAGAAGTGTGCCTGGGGTTACTATGATTAATACTTAA MEHWKLLGLFSFVVFTWEIVWPRWYQSLPPISKGYGTLCLLVTTASQLSVLNPYYIALLYGRVFKNFEVWRLFTNFFFLGFSINFGIRLLMIPRYGVQLEQGPFQRRTADFLWMMIFGAFSLLVKESLHVSILCSIGMSVILFSLKRSVPGVTMINT Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo10195.1 vs. NCBI nr
Match: gi|902153856|gb|KNA05753.1| (hypothetical protein SOVF_187530 [Spinacia oleracea]) HSP 1 Score: 199.1 bits (505), Expect = 5.600e-48 Identity = 105/135 (77.78%), Postives = 113/135 (83.70%), Query Frame = 1
BLAST of Spo10195.1 vs. NCBI nr
Match: gi|731354024|ref|XP_010688360.1| (PREDICTED: derlin-1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 172.6 bits (436), Expect = 5.600e-40 Identity = 93/135 (68.89%), Postives = 104/135 (77.04%), Query Frame = 1
BLAST of Spo10195.1 vs. NCBI nr
Match: gi|823154675|ref|XP_012477219.1| (PREDICTED: derlin-1 [Gossypium raimondii]) HSP 1 Score: 166.0 bits (419), Expect = 5.300e-38 Identity = 86/123 (69.92%), Postives = 101/123 (82.11%), Query Frame = 1
BLAST of Spo10195.1 vs. NCBI nr
Match: gi|659099827|ref|XP_008450797.1| (PREDICTED: derlin-1 [Cucumis melo]) HSP 1 Score: 161.4 bits (407), Expect = 1.300e-36 Identity = 84/123 (68.29%), Postives = 97/123 (78.86%), Query Frame = 1
BLAST of Spo10195.1 vs. NCBI nr
Match: gi|449435794|ref|XP_004135679.1| (PREDICTED: derlin-1 [Cucumis sativus]) HSP 1 Score: 160.2 bits (404), Expect = 2.900e-36 Identity = 83/123 (67.48%), Postives = 97/123 (78.86%), Query Frame = 1
BLAST of Spo10195.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QGG3_SPIOL (Derlin OS=Spinacia oleracea GN=SOVF_187530 PE=3 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 3.900e-48 Identity = 105/135 (77.78%), Postives = 113/135 (83.70%), Query Frame = 1
BLAST of Spo10195.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BPP3_BETVU (Derlin OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g197750 PE=3 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 3.900e-40 Identity = 93/135 (68.89%), Postives = 104/135 (77.04%), Query Frame = 1
BLAST of Spo10195.1 vs. UniProtKB/TrEMBL
Match: A0A0D2PJJ4_GOSRA (Derlin OS=Gossypium raimondii GN=B456_004G282600 PE=3 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 3.700e-38 Identity = 86/123 (69.92%), Postives = 101/123 (82.11%), Query Frame = 1
BLAST of Spo10195.1 vs. UniProtKB/TrEMBL
Match: A0A0A0LZA3_CUCSA (Derlin OS=Cucumis sativus GN=Csa_1G575080 PE=3 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 2.000e-36 Identity = 83/123 (67.48%), Postives = 97/123 (78.86%), Query Frame = 1
BLAST of Spo10195.1 vs. UniProtKB/TrEMBL
Match: A0A059CML6_EUCGR (Derlin OS=Eucalyptus grandis GN=EUGRSUZ_C00616 PE=3 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 2.600e-36 Identity = 79/124 (63.71%), Postives = 97/124 (78.23%), Query Frame = 1
BLAST of Spo10195.1 vs. ExPASy Swiss-Prot
Match: DERL1_ORYSJ (Derlin-1 OS=Oryza sativa subsp. japonica GN=DER1 PE=2 SV=2) HSP 1 Score: 150.6 bits (379), Expect = 1.400e-35 Identity = 78/131 (59.54%), Postives = 96/131 (73.28%), Query Frame = 1
BLAST of Spo10195.1 vs. ExPASy Swiss-Prot
Match: DER12_MAIZE (Derlin-1.2 OS=Zea mays GN=DER1.2 PE=2 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 5.400e-35 Identity = 73/102 (71.57%), Postives = 83/102 (81.37%), Query Frame = 1
BLAST of Spo10195.1 vs. ExPASy Swiss-Prot
Match: DERL1_ARATH (Derlin-1 OS=Arabidopsis thaliana GN=DER1 PE=2 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 1.300e-33 Identity = 74/123 (60.16%), Postives = 92/123 (74.80%), Query Frame = 1
BLAST of Spo10195.1 vs. ExPASy Swiss-Prot
Match: DER11_MAIZE (Derlin-1.1 OS=Zea mays GN=DER1.1 PE=2 SV=2) HSP 1 Score: 136.0 bits (341), Expect = 3.600e-31 Identity = 76/131 (58.02%), Postives = 90/131 (68.70%), Query Frame = 1
BLAST of Spo10195.1 vs. ExPASy Swiss-Prot
Match: DERL2_PONAB (Derlin-2 OS=Pongo abelii GN=DERL2 PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 5.100e-17 Identity = 45/110 (40.91%), Postives = 68/110 (61.82%), Query Frame = 1
BLAST of Spo10195.1 vs. TAIR (Arabidopsis)
Match: AT4G29330.1 (DERLIN-1) HSP 1 Score: 144.1 bits (362), Expect = 7.600e-35 Identity = 74/123 (60.16%), Postives = 92/123 (74.80%), Query Frame = 1
BLAST of Spo10195.1 vs. TAIR (Arabidopsis)
Match: AT4G04860.1 (DERLIN-2.2) HSP 1 Score: 73.9 bits (180), Expect = 9.600e-14 Identity = 35/97 (36.08%), Postives = 58/97 (59.79%), Query Frame = 1
BLAST of Spo10195.1 vs. TAIR (Arabidopsis)
Match: AT4G21810.1 (DERLIN-2.1) HSP 1 Score: 73.2 bits (178), Expect = 1.600e-13 Identity = 35/97 (36.08%), Postives = 58/97 (59.79%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo10195.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo10195.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo10195.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo10195.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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