Spo10146 (gene)

Overview
NameSpo10146
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRAN GTPase activating protein
LocationSpoScf_02682 : 31077 .. 34800 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTTATATGTTCTTGTGGTGGTGAGTTTTTAATGATATCATGTTATATGCTATCTTCAAATTAGATCTATTATTATGACACAGGAGTTGATAATTACTACATCCGTTCCAGAAAGTTCTTTAGAATTTATTTTATTCTATTTTTGGGGGTATAAAATTTATATTTACATTCTTATTTAGCCTACCATAATATTTTATTATGGGAGTCAAATACAAAGTATAACTTATCTATTCACAATGTTTTAATGTTAATTTGCTCCACTTATATTCTTGGGGAATTTATGGTCACTTAATTTTCCAGTTGTTATCCTTCATTATCACATTCTTACCAAAGTTTCTTAATTACCATGTTAATATTAAGCGTATAAAGATCATTTTGAAACGGTTTTAGTACTTAAGAGAATAGAATCACACAAGTTTAATTCTACCATTGACACGACCGAACAAAGGATCTATTGGATGAGAAGTTTGATGAGAATTTAGATAATTCTACCAATAAACACAACCGAACAAACAATGAATTTGAGAAGTTCAGTCAATTAGGAAGAGTTTTAAAGTTTGGATTGATATATGTTGCATATCTTGCACATGATCCTGTAGACACGGAAAATTTGTGAATGTGCCACGTGGGATTTTATTAGGGTCAAAAGTCAAAGTATTGACTCAATAATTATTTGACGGTCAATAAAATTAATTAACTTGGGTGCATGAATCAATTTTGCCCATTTAGTTATTTCAATCAAACCCCGATATTATTATATTGGTTAAAATCGGACAAAATAGGTTAAACTGTTACAAACGGGTAGTCAACAAACGGGTCATGACTACCAAGTCCAAACAAAGAGGCCCAATGTACATCAAAACCCTAAAAGTCTCTCCATCTTATAAATAAGGTTCTTTACTTCATTTGAAAGGGGAGGAGAAACAGACGGCAAACCTAAATCTCTCACATATTCTCCTGCCAGTCAAGTCTCATCAAACTCTCTCTCCCTAGAAGAAGAACAACAAGCATTCAAAAAGTCGTGTCGTTCCATTCTAAAAGATCGACCTTGGACGAGATCAAGCCCGAAGGCCCTTATTCAAGAAGATCAATCCCGTTCGTGAGCAACACCAAATCGACATCAAACATCCCGGTGGAAGAAGAACAACAAGCATACAAAACTGACGTGCCGTTCTATTCTACATCGACATTCTTGAACGAGATCAAGCCCGAAGGCCCTCATTCGAGTACAAATCAAACTAGTCCGAGAATCAAATCAAGTCAGTTTGTGAGCCAAGTCAAATTCAACGTGGAGATCAAATCAGAGGAGCAAATATTAGAGATTGTACCCAAATTCATCAAAAATCAATAAAATATATTTTGTTCACATTATTTTGATTCTGTTATTTTTGCAGACTCGAAAATTTGTGTTTACAGATCCGAATTTGAGTTGCCTTCATTTTGGAATTCGGCTTTTTGGTCGGATTTCGAGTTGTTTTTAATCCGGATTTGGATTGAATGATTTTTCTTAGATTGGGTCTGTAAACACAAATCTAAAGTCTGCAAAATAAGAGAATCGAAATATGTGAACAAAATATATTTTTAAAGTCTGCAAAATAAGAGAATCAAAATATGTGAACAAAATATATTTTTATTGATTTTTGAAGTTTCTGGGTACAATCTCTAATATTTGTTCCTCTGATTCGATCTCCACTTTGTATTCGATTTGGTTCACGGACTGGATTAATTTGTACTTGGATGAGGGCCTTTGGGCTTGATCTCATTCAAGAATGTTGATGTAGAAATAGAATGACACGTCAGTTTTGTATGCTAGTTGTTATTCTTCCACCAGGATTATTTGATGTTGATTTGGTGTTACTCACGAACTTGTTTGATCTTCTTGAATAAGGGCCTCCGGGCTTGTTCTCGTCCAAGGTTGATCTTCTAGAATGGAACACGTGTCGATTTGAATGCTTGATGTTCTTCTTCTAGGGAGAGAGTTGTGACTTGACTGGTAGGGAGAGATTTGAGAGTTTTTGGTTTTGCCGTCTGTTTCTCCCTCTCCAGTAAACGAGGTAAAAAGGCATATTTATAGGATGATGGAAGCTTTTAGGGTTTTGGGTATTCTCTGGACCTTTTTGTTTGGACTTGGTAGTCAGGGCCCATTTATAATAGTTTAACCCGTTTTGTTGAGTTTTAACCATTAAAATAAATGATAAAAAAAACTAAATGGGCTATATTATTTTGTTTAGCCAAATTAATTAAATTTAATTGACCGTCAAATATATATCGAGTCAATATTTTAACTTTTGACCCAAATAATATCCAACGTGGCACGTTAACAAAGAATCAGATCCAAACTAAAGTGTCGTCTACACACTCAAGTACTCAACCATCTACATGGTGTATCTATAGTTTTTTAATACTTCATAGTAAGGTGTATAATTATTATTTTCATGGTCTTTAATGATAAATACATCTAAGATTAGTTGAGTAAAATGTCAATTCATCGAGAGAGATGAAAATAGAAAAATCCTCAGATCATCGGCAAACAGTCAAATGTCAATTCATCGAAAAAGATGAAAATAGAAAAGGCTTCGGGTCTATAGAAAGTGTGTTCCATAGTAGTAGGTGAAACTTAGATTAATTGAAACTTATTGGATCGGACAAAAGAGACAAATAGTGTTGCCGGAAAGTTATTGAGGAATACCGGAAATTTGAGAGTAAAAACATGAGGTGAAAACTTGAGGTGAAAAGTGAAGAAAAGAGAATTTTTATAAGGGTAAATTCGTACTTTCACATTAGATTCCGCAGGCGTTTTTAGCATATGCGGACGTCGAATAACGAAACACAAAACTTAGAACTGGTTAAACTCGAAGTATGGAGTATTTTATACGAGAACCCCTTAATTACAAAATTGAATACGGAGTAGGTGTGTAATATCATCCGTCCAAAACGATTACAAAAGGCCCACAATGGTACATTGTCATTGTTATCAACAACCACCAAAAATAAAATAAAAATAAAAATAAAATAAAAAAACCCATTTTTTCAAATTCAAACACATTTAAAACCATAAAACTCGCCTTTTGTAAAACTCGCTTTTTGTAATCTTTCATTTCCTATTTTCATCACTTACACTGTAAGAAATCAAACGTCGTCGTCTCCTTCATCTACATTCCTCCGCCGTAATGTCCGACACCGTAGCAGACGAAACCCCGGTCACCGGAGAAATGCATCAAACTCGCGACACCGAACAACCACAACCACCACCAGCACCACAATCGGCAGAAAATCTTTCCGAAAAGATGGAGAAGATGAACATTTCTGGTTCATCCTTCAGCATTTGGCCTCCAACTGAGCGAACCAGAGATGCCGTAATCAACCGTCTCATCGAGACACTTTCCACTCCATCCGTCCTCTCCAAGCGCTACGGATCGATGCCTTCCGACGAAGCTTCTTCCACCGCTAGAGCCATCGAAGAAGAAGCCTACAACGCCGCCGCCGATTCCTCCTCCACCACCGCCGCCGACGCGTCTTCTGGTCCGGCTTCCTCCATTGATGAAGGTATCGAGATTCTTCAGGTTTATTCTAAAGAGATTAGCAAGCGGATGCTTGACGCTGTCAAATCTAGGGCTGCAACTCCTCCATCTGAGGACTCTGCTGCACCTGAATCAGATCATGTTACCGTTAAAAGTGAGGAAGTTTCTTCTTCCGTTAATGATGAATCTTCGTCTTAG

mRNA sequence

ATGGAATTTATATGTTCTTGTGGTGAAATCAAACGTCGTCGTCTCCTTCATCTACATTCCTCCGCCGTAATGTCCGACACCGTAGCAGACGAAACCCCGGTCACCGGAGAAATGCATCAAACTCGCGACACCGAACAACCACAACCACCACCAGCACCACAATCGGCAGAAAATCTTTCCGAAAAGATGGAGAAGATGAACATTTCTGGTTCATCCTTCAGCATTTGGCCTCCAACTGAGCGAACCAGAGATGCCGTAATCAACCGTCTCATCGAGACACTTTCCACTCCATCCGTCCTCTCCAAGCGCTACGGATCGATGCCTTCCGACGAAGCTTCTTCCACCGCTAGAGCCATCGAAGAAGAAGCCTACAACGCCGCCGCCGATTCCTCCTCCACCACCGCCGCCGACGCGTCTTCTGGTCCGGCTTCCTCCATTGATGAAGGTATCGAGATTCTTCAGGTTTATTCTAAAGAGATTAGCAAGCGGATGCTTGACGCTGTCAAATCTAGGGCTGCAACTCCTCCATCTGAGGACTCTGCTGCACCTGAATCAGATCATGTTACCGTTAAAAGTGAGGAAGTTTCTTCTTCCGTTAATGATGAATCTTCGTCTTAG

Coding sequence (CDS)

ATGGAATTTATATGTTCTTGTGGTGAAATCAAACGTCGTCGTCTCCTTCATCTACATTCCTCCGCCGTAATGTCCGACACCGTAGCAGACGAAACCCCGGTCACCGGAGAAATGCATCAAACTCGCGACACCGAACAACCACAACCACCACCAGCACCACAATCGGCAGAAAATCTTTCCGAAAAGATGGAGAAGATGAACATTTCTGGTTCATCCTTCAGCATTTGGCCTCCAACTGAGCGAACCAGAGATGCCGTAATCAACCGTCTCATCGAGACACTTTCCACTCCATCCGTCCTCTCCAAGCGCTACGGATCGATGCCTTCCGACGAAGCTTCTTCCACCGCTAGAGCCATCGAAGAAGAAGCCTACAACGCCGCCGCCGATTCCTCCTCCACCACCGCCGCCGACGCGTCTTCTGGTCCGGCTTCCTCCATTGATGAAGGTATCGAGATTCTTCAGGTTTATTCTAAAGAGATTAGCAAGCGGATGCTTGACGCTGTCAAATCTAGGGCTGCAACTCCTCCATCTGAGGACTCTGCTGCACCTGAATCAGATCATGTTACCGTTAAAAGTGAGGAAGTTTCTTCTTCCGTTAATGATGAATCTTCGTCTTAG

Protein sequence

MEFICSCGEIKRRRLLHLHSSAVMSDTVADETPVTGEMHQTRDTEQPQPPPAPQSAENLSEKMEKMNISGSSFSIWPPTERTRDAVINRLIETLSTPSVLSKRYGSMPSDEASSTARAIEEEAYNAAADSSSTTAADASSGPASSIDEGIEILQVYSKEISKRMLDAVKSRAATPPSEDSAAPESDHVTVKSEEVSSSVNDESSS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo10146.1Spo10146.1mRNA


Homology
[Close]
BLAST of Spo10146.1 vs. NCBI nr
Match: gi|902234881|gb|KNA23629.1| (hypothetical protein SOVF_023290 [Spinacia oleracea])

HSP 1 Score: 324.7 bits (831), Expect = 1.200e-85
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 1 

		  

Query: 24  MSDTVADETPVTGEMHQTRDTEQPQPPPAPQSAENLSEKMEKMNISGSSFSIWPPTERTR 83
           MSDTVADE PVTGEMHQTRDTEQPQPPPAPQSAENLSEKMEKMNISGSSFSIWPPTERTR
Sbjct: 1   MSDTVADEIPVTGEMHQTRDTEQPQPPPAPQSAENLSEKMEKMNISGSSFSIWPPTERTR 60

Query: 84  DAVINRLIETLSTPSVLSKRYGSMPSDEASSTARAIEEEAYNAAADSSSTTAADASSGPA 143
           DAVINRLIETLSTPSVLSKRYGSMPSDEASSTARAIEEEAYNAAADSSSTTAADASSGPA
Sbjct: 61  DAVINRLIETLSTPSVLSKRYGSMPSDEASSTARAIEEEAYNAAADSSSTTAADASSGPA 120

Query: 144 SSIDEGIEILQVYSKEISKRMLDAVKSRAATPPSEDSAAPESDHVTVKSEEVSSSVNDES 203
           SSIDEGIEILQVYSKEISKRMLDAVKSRAATPPSEDSAAPESDHVTVKSEEVSSSVNDES
Sbjct: 121 SSIDEGIEILQVYSKEISKRMLDAVKSRAATPPSEDSAAPESDHVTVKSEEVSSSVNDES 180

Query: 204 SS 206
           SS
Sbjct: 181 SS 182
[Close]
BLAST of Spo10146.1 vs. NCBI nr
Match: gi|902194082|gb|KNA12452.1| (hypothetical protein SOVF_125830 [Spinacia oleracea])

HSP 1 Score: 265.0 bits (676), Expect = 1.100e-67
Identity = 158/182 (86.81%), Postives = 164/182 (90.11%), Query Frame = 1 

		  

Query: 24  MSDTVADETPVTGEMHQTRDTEQPQPPPAPQSAENLSEKMEKMNISGSSFSIWPPTERTR 83
           MSDTVADE PVTGEMHQTRDTEQ QP   PQSAEN+S+KMEKMNISGSSFSIWPPTERTR
Sbjct: 1   MSDTVADEIPVTGEMHQTRDTEQ-QP---PQSAENISDKMEKMNISGSSFSIWPPTERTR 60

Query: 84  DAVINRLIETLSTPSVLSKRYGSMPSDEASSTARAIEEEAYNAAADSSSTTAADASSGPA 143
           DAVINRLIETLSTP VLSKRYGSMPSDEASSTARAIEEEAYNAAADSS      ASSGP 
Sbjct: 61  DAVINRLIETLSTPFVLSKRYGSMPSDEASSTARAIEEEAYNAAADSSIA----ASSGPG 120

Query: 144 SSIDEGIEILQVYSKEISKRMLDAVKSRAATPPSEDSAAPESDHVTVKSEEVSSSVNDES 203
           SSIDEGIEILQVYSKEISKRMLDAVKSRAAT P EDSAAPES+  T+ SEEVSSSV++ES
Sbjct: 121 SSIDEGIEILQVYSKEISKRMLDAVKSRAATLPYEDSAAPESNRATIASEEVSSSVDNES 174

Query: 204 SS 206
           SS
Sbjct: 181 SS 174
[Close]
BLAST of Spo10146.1 vs. NCBI nr
Match: gi|731314788|ref|XP_010688455.1| (PREDICTED: MFP1 attachment factor 1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 215.3 bits (547), Expect = 9.900e-53
Identity = 133/183 (72.68%), Postives = 149/183 (81.42%), Query Frame = 1 

		  

Query: 24  MSDTVADETPVTGEMHQTRDTEQPQPPPAPQSAENLSEKMEKMNISGSSFSIWPPTERTR 83
           MSDT ADE+P  G +    +T+QP P      AENLSEKMEKMNIS SSFSIWPPT+RTR
Sbjct: 1   MSDTTADESPSAGAISDAGETQQPAP------AENLSEKMEKMNISSSSFSIWPPTQRTR 60

Query: 84  DAVINRLIETLSTPSVLSKRYGSMPSDEASSTARAIEEEAYNAAADSSSTTAADASSGPA 143
           DAVINRLIETLSTPSVLSKRYGSMP DEASSTA+AIEEEAY  AA ++S+ ++ AS   A
Sbjct: 61  DAVINRLIETLSTPSVLSKRYGSMPLDEASSTAKAIEEEAYTFAAAAASSASSAAS---A 120

Query: 144 SSIDEGIEILQVYSKEISKRMLDAVKSRAATPPSEDSAAPESDHVTV-KSEEVSSSVNDE 203
           SSIDEGIEILQVYSKEISKRMLDAVKS+A  PP + S APESD  TV  SE+VSSSV++E
Sbjct: 121 SSIDEGIEILQVYSKEISKRMLDAVKSKAVQPPIDVSVAPESDRATVATSEDVSSSVDNE 174

Query: 204 SSS 206
           SSS
Sbjct: 181 SSS 174
[Close]
BLAST of Spo10146.1 vs. NCBI nr
Match: gi|702371354|ref|XP_010061708.1| (PREDICTED: MFP1 attachment factor 1-like [Eucalyptus grandis])

HSP 1 Score: 133.7 bits (335), Expect = 3.800e-28
Identity = 78/142 (54.93%), Postives = 98/142 (69.01%), Query Frame = 1 

		  

Query: 49  PPPAPQSAENLSE------KMEKMNISGSSFSIWPPTERTRDAVINRLIETLSTPSVLSK 108
           PPP PQ  E + +      + E       +FSIWPP++RTRDAV+ RLIETLSTPSVLSK
Sbjct: 37  PPPPPQMEETVQDPALPEPRKEAGAAPNVAFSIWPPSQRTRDAVVARLIETLSTPSVLSK 96

Query: 109 RYGSMPSDEASSTARAIEEEAYNAAADSSSTTAADASSGPASSIDEGIEILQVYSKEISK 168
           RYG++P DEA+S ARAIEEEA+NAA             G A++ D+GIE+LQ+YSKEISK
Sbjct: 97  RYGTVPHDEAASAARAIEEEAFNAA------------GGAAAADDDGIEVLQIYSKEISK 156

Query: 169 RMLDAVKSRAATPPSEDSAAPE 185
           RMLD+VK+RA    +  +A PE
Sbjct: 157 RMLDSVKTRAVAATASPAATPE 166
[Close]
BLAST of Spo10146.1 vs. NCBI nr
Match: gi|731429087|ref|XP_002285058.3| (PREDICTED: MFP1 attachment factor 1-like [Vitis vinifera])

HSP 1 Score: 132.1 bits (331), Expect = 1.100e-27
Identity = 85/156 (54.49%), Postives = 112/156 (71.79%), Query Frame = 1 

		  

Query: 50  PPAPQSAENLSEKMEKMNISGSSFSIWPPTERTRDAVINRLIETLSTPSVLSKRYGSMPS 109
           PP  Q     ++K +K+N++   FSIWPPT+RTRDAVINRLIETL+TPSVL+KRYG+MP+
Sbjct: 21  PPHHQEPPQEAKKPDKINVA---FSIWPPTQRTRDAVINRLIETLTTPSVLAKRYGTMPA 80

Query: 110 DEASSTARAIEEEAYNAAADSSSTTAADASSGPASSIDEGIEILQVYSKEISKRMLDAVK 169
           DEAS+TAR +EEEAY AA             G  ++ DEGIEILQVYS+EISKRML+AVK
Sbjct: 81  DEASATARLVEEEAYAAA------------GGSPNADDEGIEILQVYSREISKRMLEAVK 140

Query: 170 SRAATPPSEDSAAPESDHVTVKSEEVSSSVNDESSS 206
           +RA +  + D  AP+S    V +   +S++++E SS
Sbjct: 141 TRAGSGSTADD-APQS---PVAASVAASTISEEISS 157
[Close]
BLAST of Spo10146.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RXJ3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_023290 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 8.100e-86
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 1 

		  

Query: 24  MSDTVADETPVTGEMHQTRDTEQPQPPPAPQSAENLSEKMEKMNISGSSFSIWPPTERTR 83
           MSDTVADE PVTGEMHQTRDTEQPQPPPAPQSAENLSEKMEKMNISGSSFSIWPPTERTR
Sbjct: 1   MSDTVADEIPVTGEMHQTRDTEQPQPPPAPQSAENLSEKMEKMNISGSSFSIWPPTERTR 60

Query: 84  DAVINRLIETLSTPSVLSKRYGSMPSDEASSTARAIEEEAYNAAADSSSTTAADASSGPA 143
           DAVINRLIETLSTPSVLSKRYGSMPSDEASSTARAIEEEAYNAAADSSSTTAADASSGPA
Sbjct: 61  DAVINRLIETLSTPSVLSKRYGSMPSDEASSTARAIEEEAYNAAADSSSTTAADASSGPA 120

Query: 144 SSIDEGIEILQVYSKEISKRMLDAVKSRAATPPSEDSAAPESDHVTVKSEEVSSSVNDES 203
           SSIDEGIEILQVYSKEISKRMLDAVKSRAATPPSEDSAAPESDHVTVKSEEVSSSVNDES
Sbjct: 121 SSIDEGIEILQVYSKEISKRMLDAVKSRAATPPSEDSAAPESDHVTVKSEEVSSSVNDES 180

Query: 204 SS 206
           SS
Sbjct: 181 SS 182
[Close]
BLAST of Spo10146.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QYV9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_125830 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 7.600e-68
Identity = 158/182 (86.81%), Postives = 164/182 (90.11%), Query Frame = 1 

		  

Query: 24  MSDTVADETPVTGEMHQTRDTEQPQPPPAPQSAENLSEKMEKMNISGSSFSIWPPTERTR 83
           MSDTVADE PVTGEMHQTRDTEQ QP   PQSAEN+S+KMEKMNISGSSFSIWPPTERTR
Sbjct: 1   MSDTVADEIPVTGEMHQTRDTEQ-QP---PQSAENISDKMEKMNISGSSFSIWPPTERTR 60

Query: 84  DAVINRLIETLSTPSVLSKRYGSMPSDEASSTARAIEEEAYNAAADSSSTTAADASSGPA 143
           DAVINRLIETLSTP VLSKRYGSMPSDEASSTARAIEEEAYNAAADSS      ASSGP 
Sbjct: 61  DAVINRLIETLSTPFVLSKRYGSMPSDEASSTARAIEEEAYNAAADSSIA----ASSGPG 120

Query: 144 SSIDEGIEILQVYSKEISKRMLDAVKSRAATPPSEDSAAPESDHVTVKSEEVSSSVNDES 203
           SSIDEGIEILQVYSKEISKRMLDAVKSRAAT P EDSAAPES+  T+ SEEVSSSV++ES
Sbjct: 121 SSIDEGIEILQVYSKEISKRMLDAVKSRAATLPYEDSAAPESNRATIASEEVSSSVDNES 174

Query: 204 SS 206
           SS
Sbjct: 181 SS 174
[Close]
BLAST of Spo10146.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D4A9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g015500 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 6.900e-53
Identity = 133/183 (72.68%), Postives = 149/183 (81.42%), Query Frame = 1 

		  

Query: 24  MSDTVADETPVTGEMHQTRDTEQPQPPPAPQSAENLSEKMEKMNISGSSFSIWPPTERTR 83
           MSDT ADE+P  G +    +T+QP P      AENLSEKMEKMNIS SSFSIWPPT+RTR
Sbjct: 1   MSDTTADESPSAGAISDAGETQQPAP------AENLSEKMEKMNISSSSFSIWPPTQRTR 60

Query: 84  DAVINRLIETLSTPSVLSKRYGSMPSDEASSTARAIEEEAYNAAADSSSTTAADASSGPA 143
           DAVINRLIETLSTPSVLSKRYGSMP DEASSTA+AIEEEAY  AA ++S+ ++ AS   A
Sbjct: 61  DAVINRLIETLSTPSVLSKRYGSMPLDEASSTAKAIEEEAYTFAAAAASSASSAAS---A 120

Query: 144 SSIDEGIEILQVYSKEISKRMLDAVKSRAATPPSEDSAAPESDHVTV-KSEEVSSSVNDE 203
           SSIDEGIEILQVYSKEISKRMLDAVKS+A  PP + S APESD  TV  SE+VSSSV++E
Sbjct: 121 SSIDEGIEILQVYSKEISKRMLDAVKSKAVQPPIDVSVAPESDRATVATSEDVSSSVDNE 174

Query: 204 SSS 206
           SSS
Sbjct: 181 SSS 174
[Close]
BLAST of Spo10146.1 vs. UniProtKB/TrEMBL
Match: F6GZW5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g09670 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 7.700e-28
Identity = 85/156 (54.49%), Postives = 112/156 (71.79%), Query Frame = 1 

		  

Query: 50  PPAPQSAENLSEKMEKMNISGSSFSIWPPTERTRDAVINRLIETLSTPSVLSKRYGSMPS 109
           PP  Q     ++K +K+N++   FSIWPPT+RTRDAVINRLIETL+TPSVL+KRYG+MP+
Sbjct: 21  PPHHQEPPQEAKKPDKINVA---FSIWPPTQRTRDAVINRLIETLTTPSVLAKRYGTMPA 80

Query: 110 DEASSTARAIEEEAYNAAADSSSTTAADASSGPASSIDEGIEILQVYSKEISKRMLDAVK 169
           DEAS+TAR +EEEAY AA             G  ++ DEGIEILQVYS+EISKRML+AVK
Sbjct: 81  DEASATARLVEEEAYAAA------------GGSPNADDEGIEILQVYSREISKRMLEAVK 140

Query: 170 SRAATPPSEDSAAPESDHVTVKSEEVSSSVNDESSS 206
           +RA +  + D  AP+S    V +   +S++++E SS
Sbjct: 141 TRAGSGSTADD-APQS---PVAASVAASTISEEISS 157
[Close]
BLAST of Spo10146.1 vs. UniProtKB/TrEMBL
Match: F5C0G6_SOLCH (MAF1 OS=Solanum chacoense GN=MAF1 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.700e-27
Identity = 83/145 (57.24%), Postives = 105/145 (72.41%), Query Frame = 1 

		  

Query: 54  QSAENLSEKMEKMNISGSSFSIWPPTERTRDAVINRLIETLSTPSVLSKRYGSMPSDEAS 113
           QS E +S++ +   ++ +SFSIWPPT+RTRDAVINRLIE+LSTPS+LSKRYG++P DEAS
Sbjct: 8   QSQETVSQETQNKPMT-TSFSIWPPTQRTRDAVINRLIESLSTPSILSKRYGTLPQDEAS 67

Query: 114 STARAIEEEAYNAAADSSSTTAADASSGPASSIDEGIEILQVYSKEISKRMLDAVKSRAA 173
            TAR IEEEA+ AA     +TA DA        D+GIEILQVYSKEISKRM+D VKSR+A
Sbjct: 68  ETARLIEEEAFAAA----GSTATDA--------DDGIEILQVYSKEISKRMIDTVKSRSA 127

Query: 174 TPPSEDSAAPESDHVTVKSEEVSSS 199
              + +S +  S+     SE  S+S
Sbjct: 128 PAAASESESKPSELPADASEPSSAS 139
[Close]
BLAST of Spo10146.1 vs. ExPASy Swiss-Prot
Match: MAF1_SOLLC (MFP1 attachment factor 1 OS=Solanum lycopersicum GN=MAF1 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 7.600e-29
Identity = 81/145 (55.86%), Postives = 105/145 (72.41%), Query Frame = 1 

		  

Query: 54  QSAENLSEKMEKMNISGSSFSIWPPTERTRDAVINRLIETLSTPSVLSKRYGSMPSDEAS 113
           QS E ++++ +   ++ +SFSIWPPT+RTRDAVINRLIE+LSTPS+LSKRYG++P DEAS
Sbjct: 8   QSQETVTQETQNKPMT-TSFSIWPPTQRTRDAVINRLIESLSTPSILSKRYGTLPQDEAS 67

Query: 114 STARAIEEEAYNAAADSSSTTAADASSGPASSIDEGIEILQVYSKEISKRMLDAVKSRAA 173
            TAR IEEEA+ AA     +TA+DA        D+GIEILQVYSKEISKRM+D VKSR+A
Sbjct: 68  ETARLIEEEAFAAA----GSTASDA--------DDGIEILQVYSKEISKRMIDTVKSRSA 127

Query: 174 TPPSEDSAAPESDHVTVKSEEVSSS 199
              + +  +  S+     SE  S+S
Sbjct: 128 PAAASEGESKPSELPADASEPSSAS 139
[Close]
BLAST of Spo10146.1 vs. ExPASy Swiss-Prot
Match: WPP1_ARATH (WPP domain-containing protein 1 OS=Arabidopsis thaliana GN=WPP1 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.400e-22
Identity = 74/152 (48.68%), Postives = 97/152 (63.82%), Query Frame = 1 

		  

Query: 40  QTRDTEQPQPPPAPQSAENLS----EKMEKMNISGSSFSIWPPTERTRDAVINRLIETLS 99
           +T       PPP  ++  + +    E  +  N    S  IWPPT++TRDAVINRLIETLS
Sbjct: 5   ETESITTSSPPPISETENSTTLPTTETEKNPNPVTISLRIWPPTQKTRDAVINRLIETLS 64

Query: 100 TPSVLSKRYGSMPSDEASSTARAIEEEAYNAAADSSSTTAADASSGPASSIDEGIEILQV 159
           T S+LSKR+GS+ S+EASS A++IE+EAY   A +S+T   D         D+GIEIL+ 
Sbjct: 65  TESILSKRFGSLESEEASSVAKSIEDEAY---AIASATVFGD---------DDGIEILKA 124

Query: 160 YSKEISKRMLDAV--KSRAATPPSEDSAAPES 186
           YSKEISKRML++V  KS  A+PP +D    ES
Sbjct: 125 YSKEISKRMLESVKAKSNVASPPPKDGDGIES 144
[Close]
BLAST of Spo10146.1 vs. ExPASy Swiss-Prot
Match: WPP2_ARATH (WPP domain-containing protein 2 OS=Arabidopsis thaliana GN=WPP2 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.800e-21
Identity = 73/188 (38.83%), Postives = 104/188 (55.32%), Query Frame = 1 

		  

Query: 37  EMHQTRDTEQPQPPPAPQSAENLS-------------------EKMEKMNISGSSFSIWP 96
           E  +T +T    PPP  +S+  +S                   E   +    G S  IWP
Sbjct: 3   ETAETINTTISSPPPESESSTTISAMTDPTSQEAASKDTDLTKEAESEKKPGGISLRIWP 62

Query: 97  PTERTRDAVINRLIETLSTPSVLSKRYGSMPSDEASSTARAIEEEAYNAAADSSSTTAAD 156
           PT++TRDAV+NRLIETLST S+LSKRYG++ SD+A++ A+ IEEEAY  A          
Sbjct: 63  PTQKTRDAVLNRLIETLSTESILSKRYGTLKSDDATTVAKLIEEEAYGVA---------- 122

Query: 157 ASSGPASSIDEGIEILQVYSKEISKRMLDAVKSRAATPPSEDSAAPESDHVTVKSEEVSS 206
             S   SS D+GI+IL++YSKEISKRML++VK+R+       S    +   +  S++ + 
Sbjct: 123 --SNAVSSDDDGIKILELYSKEISKRMLESVKARSNASVGNGSVEDANTDASEVSKDDAG 178
[Close]
BLAST of Spo10146.1 vs. ExPASy Swiss-Prot
Match: WPP3_ARATH (WPP domain-containing protein 3 OS=Arabidopsis thaliana GN=WPP3 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.900e-11
Identity = 52/149 (34.90%), Postives = 83/149 (55.70%), Query Frame = 1 

		  

Query: 38  MHQTRDT-----EQPQPPPAPQSAEN----------LSEKMEKMNISGSSFSIWPPTERT 97
           M +T DT       PQP    +S E            SE  ++    G  FS+WPP +++
Sbjct: 1   MAETADTINTTVSTPQPQLESRSDETSCLQKHRSDATSEVTKEEKSGGILFSVWPPCQKS 60

Query: 98  RDAVINRLIETLSTPSVLSKRYGSMPSDEASSTARAIEEEAYNAAADSSSTTAADASSGP 157
           RD V+N +I+TLST S+LS +YG++  +EAS+ A++IEE+AY+ A+   S+         
Sbjct: 61  RDYVVNSMIKTLSTDSILSYKYGTIKPEEASAVAKSIEEKAYDIASRFVSS--------- 120

Query: 158 ASSIDEGIEILQVYSKEISKRMLDAVKSR 172
                +GI+ L+VY  E S+RM+++ + R
Sbjct: 121 -----DGIKNLEVYGIETSERMIESAEVR 135
[Close]
BLAST of Spo10146.1 vs. TAIR (Arabidopsis)
Match: AT5G43070.1 (WPP domain protein 1)

HSP 1 Score: 107.8 bits (268), Expect = 7.800e-24
Identity = 74/152 (48.68%), Postives = 97/152 (63.82%), Query Frame = 1 

		  

Query: 40  QTRDTEQPQPPPAPQSAENLS----EKMEKMNISGSSFSIWPPTERTRDAVINRLIETLS 99
           +T       PPP  ++  + +    E  +  N    S  IWPPT++TRDAVINRLIETLS
Sbjct: 5   ETESITTSSPPPISETENSTTLPTTETEKNPNPVTISLRIWPPTQKTRDAVINRLIETLS 64

Query: 100 TPSVLSKRYGSMPSDEASSTARAIEEEAYNAAADSSSTTAADASSGPASSIDEGIEILQV 159
           T S+LSKR+GS+ S+EASS A++IE+EAY   A +S+T   D         D+GIEIL+ 
Sbjct: 65  TESILSKRFGSLESEEASSVAKSIEDEAY---AIASATVFGD---------DDGIEILKA 124

Query: 160 YSKEISKRMLDAV--KSRAATPPSEDSAAPES 186
           YSKEISKRML++V  KS  A+PP +D    ES
Sbjct: 125 YSKEISKRMLESVKAKSNVASPPPKDGDGIES 144
[Close]
BLAST of Spo10146.1 vs. TAIR (Arabidopsis)
Match: AT1G47200.1 (WPP domain protein 2)

HSP 1 Score: 102.4 bits (254), Expect = 3.300e-22
Identity = 73/188 (38.83%), Postives = 104/188 (55.32%), Query Frame = 1 

		  

Query: 37  EMHQTRDTEQPQPPPAPQSAENLS-------------------EKMEKMNISGSSFSIWP 96
           E  +T +T    PPP  +S+  +S                   E   +    G S  IWP
Sbjct: 3   ETAETINTTISSPPPESESSTTISAMTDPTSQEAASKDTDLTKEAESEKKPGGISLRIWP 62

Query: 97  PTERTRDAVINRLIETLSTPSVLSKRYGSMPSDEASSTARAIEEEAYNAAADSSSTTAAD 156
           PT++TRDAV+NRLIETLST S+LSKRYG++ SD+A++ A+ IEEEAY  A          
Sbjct: 63  PTQKTRDAVLNRLIETLSTESILSKRYGTLKSDDATTVAKLIEEEAYGVA---------- 122

Query: 157 ASSGPASSIDEGIEILQVYSKEISKRMLDAVKSRAATPPSEDSAAPESDHVTVKSEEVSS 206
             S   SS D+GI+IL++YSKEISKRML++VK+R+       S    +   +  S++ + 
Sbjct: 123 --SNAVSSDDDGIKILELYSKEISKRMLESVKARSNASVGNGSVEDANTDASEVSKDDAG 178
[Close]
BLAST of Spo10146.1 vs. TAIR (Arabidopsis)
Match: AT5G27940.1 (WPP domain protein 3)

HSP 1 Score: 70.9 bits (172), Expect = 1.100e-12
Identity = 52/149 (34.90%), Postives = 83/149 (55.70%), Query Frame = 1 

		  

Query: 38  MHQTRDT-----EQPQPPPAPQSAEN----------LSEKMEKMNISGSSFSIWPPTERT 97
           M +T DT       PQP    +S E            SE  ++    G  FS+WPP +++
Sbjct: 1   MAETADTINTTVSTPQPQLESRSDETSCLQKHRSDATSEVTKEEKSGGILFSVWPPCQKS 60

Query: 98  RDAVINRLIETLSTPSVLSKRYGSMPSDEASSTARAIEEEAYNAAADSSSTTAADASSGP 157
           RD V+N +I+TLST S+LS +YG++  +EAS+ A++IEE+AY+ A+   S+         
Sbjct: 61  RDYVVNSMIKTLSTDSILSYKYGTIKPEEASAVAKSIEEKAYDIASRFVSS--------- 120

Query: 158 ASSIDEGIEILQVYSKEISKRMLDAVKSR 172
                +GI+ L+VY  E S+RM+++ + R
Sbjct: 121 -----DGIKNLEVYGIETSERMIESAEVR 135
[Close]
BLAST of Spo10146.1 vs. TAIR (Arabidopsis)
Match: AT3G63130.1 (RAN GTPase activating protein 1)

HSP 1 Score: 51.6 bits (122), Expect = 6.700e-7
Identity = 37/115 (32.17%), Postives = 61/115 (53.04%), Query Frame = 1 

		  

Query: 72  SFSIWPPTERTRDAVINRLIETLSTPSVLSKRYGSMPSDEASSTARAIEEEAYNAAADSS 131
           S  +WPP++ TR  ++ R+ + ++TPS+ S++YG +  +EA   A+ IE+ A+ A A+  
Sbjct: 14  SVKMWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKRIEDLAF-ATANKH 73

Query: 132 STTAADASSGPASSIDEGIEILQVYSKEISKRMLDAVKSRAATPPSEDSAAPESD 187
                D          +G   + VY+KE SK MLD +K R     SE   + + D
Sbjct: 74  FQNEPDG---------DGTSAVHVYAKESSKLMLDVIK-RGPQEESEVEVSKDGD 117
[Close]
BLAST of Spo10146.1 vs. TAIR (Arabidopsis)
Match: AT5G19320.1 (RAN GTPase activating protein 2)

HSP 1 Score: 49.3 bits (116), Expect = 3.300e-6
Identity = 37/118 (31.36%), Postives = 62/118 (52.54%), Query Frame = 1 

		  

Query: 72  SFSIWPPTERTRDAVINRLIETLSTPSVLSKRYGSMPSDEASSTARAIEEEAYNAAADSS 131
           S  +WPP+  TR A+I R+    S+ ++ +++YGS+  D+A+  A+ IE+ A+ + A+  
Sbjct: 13  SIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIAF-STANQQ 72

Query: 132 STTAADASSGPASSIDEGIEILQVYSKEISKRMLDAVKS------RAATPPSEDSAAP 184
                D   G A         +Q+Y+KE SK +L+ +K        A    SEDS +P
Sbjct: 73  FEREPDGDGGSA---------VQLYAKECSKLILEVLKKGPVAKVAARELISEDSVSP 120
The following BLAST results are available for this feature:
BLAST of Spo10146.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902234881|gb|KNA23629.1|1.2e-8599.4hypothetical protein SOVF_0232... [more]
gi|902194082|gb|KNA12452.1|1.1e-6786.8hypothetical protein SOVF_1258... [more]
gi|731314788|ref|XP_010688455.1|9.9e-5372.6PREDICTED: MFP1 attachment fac... [more]
gi|702371354|ref|XP_010061708.1|3.8e-2854.9PREDICTED: MFP1 attachment fac... [more]
gi|731429087|ref|XP_002285058.3|1.1e-2754.4PREDICTED: MFP1 attachment fac... [more]
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BLAST of Spo10146.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RXJ3_SPIOL8.1e-8699.4Uncharacterized protein OS=Spi... [more]
A0A0K9QYV9_SPIOL7.6e-6886.8Uncharacterized protein OS=Spi... [more]
A0A0J8D4A9_BETVU6.9e-5372.6Uncharacterized protein OS=Bet... [more]
F6GZW5_VITVI7.7e-2854.4Putative uncharacterized prote... [more]
F5C0G6_SOLCH1.7e-2757.2MAF1 OS=Solanum chacoense GN=M... [more]
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BLAST of Spo10146.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
MAF1_SOLLC7.6e-2955.8MFP1 attachment factor 1 OS=So... [more]
WPP1_ARATH1.4e-2248.6WPP domain-containing protein ... [more]
WPP2_ARATH5.8e-2138.8WPP domain-containing protein ... [more]
WPP3_ARATH1.9e-1134.9WPP domain-containing protein ... [more]
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BLAST of Spo10146.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G43070.17.8e-2448.6WPP domain protein 1[more]
AT1G47200.13.3e-2238.8WPP domain protein 2[more]
AT5G27940.11.1e-1234.9WPP domain protein 3[more]
AT3G63130.16.7e-732.1RAN GTPase activating protein ... [more]
AT5G19320.13.3e-631.3RAN GTPase activating protein ... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025265WPP domainPFAMPF13943WPPcoord: 72..174
score: 3.2
NoneNo IPR availablePANTHERPTHR34362FAMILY NOT NAMEDcoord: 37..202
score: 3.2
NoneNo IPR availablePANTHERPTHR34362:SF1WPP DOMAIN-CONTAINING PROTEIN 1-RELATEDcoord: 37..202
score: 3.2

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009809 lignin biosynthetic process
biological_process GO:0009409 response to cold
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0009657 plastid organization
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0016573 histone acetylation
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0009411 response to UV
biological_process GO:0000719 photoreactive repair
biological_process GO:0006139 nucleobase-containing compound metabolic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0009805 coumarin biosynthetic process
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0009811 stilbene biosynthetic process
biological_process GO:0016310 phosphorylation
biological_process GO:0000023 maltose metabolic process
biological_process GO:0006397 mRNA processing
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006796 phosphate-containing compound metabolic process
biological_process GO:0008152 metabolic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0006574 valine catabolic process
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0009780 photosynthetic NADP+ reduction
biological_process GO:0042550 photosystem I stabilization
biological_process GO:0009987 cellular process
biological_process GO:0050821 protein stabilization
biological_process GO:0006552 leucine catabolic process
biological_process GO:0006550 isoleucine catabolic process
biological_process GO:0019521 D-gluconate metabolic process
biological_process GO:0006754 ATP biosynthetic process
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0044085 cellular component biogenesis
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0015979 photosynthesis
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009507 chloroplast
cellular_component GO:0009523 photosystem II
cellular_component GO:0005737 cytoplasm
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0044428 nuclear part
cellular_component GO:0012505 endomembrane system
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005778 peroxisomal membrane
cellular_component GO:0000123 histone acetyltransferase complex
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:0009295 nucleoid
cellular_component GO:0030093 chloroplast photosystem I
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004386 helicase activity
molecular_function GO:0051287 NAD binding
molecular_function GO:0008442 3-hydroxyisobutyrate dehydrogenase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016853 isomerase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004402 histone acetyltransferase activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0016207 4-coumarate-CoA ligase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0003729 mRNA binding
molecular_function GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity
RNA-Seq Expression