Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACTCATTTGAAGAACCAAGAACACCCAACAATGTGATAAACACAAAAAACAACATTTCCACCAAACCGAAATGGCCATCTTCAAGAAGAACTCCATCTCTTTCGTCTTCACCATCTCTCTCCTCAAACTCATCATCATCTTTTAGATCCTTCTCCCATGAAGATTCCCCTCCTCCTAGTCCACCTCACAGAATCCCATTCTCTTGGGAATCAATCCCAGGAATCCCAAAACATCAGATTATCAAAAGACTTGATTCTTCTAGGAAATCAAAATATCTTCCCCTGCCTCCAGCTGCTGCCCCTGTTTCCGCTACTACTAAATCAATTTCAAATTACAAGAAAAATCACATTATTTGTACGAAAGATCCTTTCTTTGATGCATTAGTCGAGTGTTCCAAAGGTGATAATGACGACGAAGACGATAAGGAAGTGTTTGGGAGCATCTTCAAAGGTCCTGCTAAGAGTTTAAGCCATAGATTGGGGTTTGTCAATTTATCTTGTAAAAATACTTGCTCTGTTTCTGAGTCTTTGGTTTTTCTACCAAGAGAACAACCTAGGAGAATTTCTTACGGCTTGGTCAAAAAACGGGCCGGGTAA ATGAACTCATTTGAAGAACCAAGAACACCCAACAATGTGATAAACACAAAAAACAACATTTCCACCAAACCGAAATGGCCATCTTCAAGAAGAACTCCATCTCTTTCGTCTTCACCATCTCTCTCCTCAAACTCATCATCATCTTTTAGATCCTTCTCCCATGAAGATTCCCCTCCTCCTAGTCCACCTCACAGAATCCCATTCTCTTGGGAATCAATCCCAGGAATCCCAAAACATCAGATTATCAAAAGACTTGATTCTTCTAGGAAATCAAAATATCTTCCCCTGCCTCCAGCTGCTGCCCCTGTTTCCGCTACTACTAAATCAATTTCAAATTACAAGAAAAATCACATTATTTGTACGAAAGATCCTTTCTTTGATGCATTAGTCGAGTGTTCCAAAGGTGATAATGACGACGAAGACGATAAGGAAGTGTTTGGGAGCATCTTCAAAGGTCCTGCTAAGAGTTTAAGCCATAGATTGGGGTTTGTCAATTTATCTTGTAAAAATACTTGCTCTGTTTCTGAGTCTTTGGTTTTTCTACCAAGAGAACAACCTAGGAGAATTTCTTACGGCTTGGTCAAAAAACGGGCCGGGTAA ATGAACTCATTTGAAGAACCAAGAACACCCAACAATGTGATAAACACAAAAAACAACATTTCCACCAAACCGAAATGGCCATCTTCAAGAAGAACTCCATCTCTTTCGTCTTCACCATCTCTCTCCTCAAACTCATCATCATCTTTTAGATCCTTCTCCCATGAAGATTCCCCTCCTCCTAGTCCACCTCACAGAATCCCATTCTCTTGGGAATCAATCCCAGGAATCCCAAAACATCAGATTATCAAAAGACTTGATTCTTCTAGGAAATCAAAATATCTTCCCCTGCCTCCAGCTGCTGCCCCTGTTTCCGCTACTACTAAATCAATTTCAAATTACAAGAAAAATCACATTATTTGTACGAAAGATCCTTTCTTTGATGCATTAGTCGAGTGTTCCAAAGGTGATAATGACGACGAAGACGATAAGGAAGTGTTTGGGAGCATCTTCAAAGGTCCTGCTAAGAGTTTAAGCCATAGATTGGGGTTTGTCAATTTATCTTGTAAAAATACTTGCTCTGTTTCTGAGTCTTTGGTTTTTCTACCAAGAGAACAACCTAGGAGAATTTCTTACGGCTTGGTCAAAAAACGGGCCGGGTAA MNSFEEPRTPNNVINTKNNISTKPKWPSSRRTPSLSSSPSLSSNSSSSFRSFSHEDSPPPSPPHRIPFSWESIPGIPKHQIIKRLDSSRKSKYLPLPPAAAPVSATTKSISNYKKNHIICTKDPFFDALVECSKGDNDDEDDKEVFGSIFKGPAKSLSHRLGFVNLSCKNTCSVSESLVFLPREQPRRISYGLVKKRAG Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo10092.1 vs. NCBI nr
Match: gi|902163589|gb|KNA06850.1| (hypothetical protein SOVF_177280 [Spinacia oleracea]) HSP 1 Score: 394.8 bits (1013), Expect = 8.800e-107 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1
BLAST of Spo10092.1 vs. NCBI nr
Match: gi|731310850|ref|XP_010678780.1| (PREDICTED: serine/threonine-protein phosphatase PP-Z1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 288.1 bits (736), Expect = 1.200e-74 Identity = 155/202 (76.73%), Postives = 172/202 (85.15%), Query Frame = 1
BLAST of Spo10092.1 vs. NCBI nr
Match: gi|703132571|ref|XP_010105156.1| (hypothetical protein L484_003894 [Morus notabilis]) HSP 1 Score: 122.9 bits (307), Expect = 6.500e-25 Identity = 95/211 (45.02%), Postives = 117/211 (55.45%), Query Frame = 1
BLAST of Spo10092.1 vs. NCBI nr
Match: gi|590603401|ref|XP_007020000.1| (Uncharacterized protein TCM_036379 [Theobroma cacao]) HSP 1 Score: 121.7 bits (304), Expect = 1.400e-24 Identity = 92/194 (47.42%), Postives = 117/194 (60.31%), Query Frame = 1
BLAST of Spo10092.1 vs. NCBI nr
Match: gi|661875748|emb|CDP19909.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 121.7 bits (304), Expect = 1.400e-24 Identity = 89/197 (45.18%), Postives = 113/197 (57.36%), Query Frame = 1
BLAST of Spo10092.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QHZ0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_177280 PE=4 SV=1) HSP 1 Score: 394.8 bits (1013), Expect = 6.100e-107 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1
BLAST of Spo10092.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D6W9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g001130 PE=4 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 8.100e-75 Identity = 155/202 (76.73%), Postives = 172/202 (85.15%), Query Frame = 1
BLAST of Spo10092.1 vs. UniProtKB/TrEMBL
Match: W9S1E4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003894 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 4.500e-25 Identity = 95/211 (45.02%), Postives = 117/211 (55.45%), Query Frame = 1
BLAST of Spo10092.1 vs. UniProtKB/TrEMBL
Match: A0A068VH58_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00009320001 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.000e-24 Identity = 89/197 (45.18%), Postives = 113/197 (57.36%), Query Frame = 1
BLAST of Spo10092.1 vs. UniProtKB/TrEMBL
Match: A0A061FIU1_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_036379 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.000e-24 Identity = 92/194 (47.42%), Postives = 117/194 (60.31%), Query Frame = 1
BLAST of Spo10092.1 vs. TAIR (Arabidopsis)
Match: AT1G71970.1 (unknown protein) HSP 1 Score: 83.2 bits (204), Expect = 2.000e-16 Identity = 78/201 (38.81%), Postives = 102/201 (50.75%), Query Frame = 1
BLAST of Spo10092.1 vs. TAIR (Arabidopsis)
Match: AT1G22680.1 (unknown protein) HSP 1 Score: 73.9 bits (180), Expect = 1.200e-13 Identity = 70/179 (39.11%), Postives = 91/179 (50.84%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo10092.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo10092.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo10092.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo10092.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
|