Spo10047 (gene)

Overview
NameSpo10047
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr1 : 45040052 .. 45041541 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAATTGCAAATAACAGAACAATTGACAAAGCTTTTCTGGTGAGTTGGACTGGTGACTACAGCCTAAACCAAGTGACAAACTTTAACTCTTTCTAGCATCAACTCTTTGTGTAACTCTGGATGATGAATCGTGTTCCTCATCTGACATAAATGCAATAAAACAGTAGAAGAAGGCACTGGAAATCGCTGAACAATAAACACATTCATGATTCATCCATCATTGCGACCAAGAAGACAATTTAGTGTCAAACCAATGTATAATGAAGATGTAGCAAACACAATGACAACAAAGAAATCCGCTAATAAGATAACTCACAAAACTCATCTTAGTTACAGTCAATAATAGTACTCCGTACAATGTTAGCCGTCTAGATCAATTGTTAGCAAAATGTATAGAGCCAATACATAGAATATATGGAGGGGAAAAACTCCATATTCCCAAGTATGAATTGTAAAGTCAATGTATTGCAAATAAGATATATGGATCTCAACACAAATTTAACAAGGAAAGAAATAGAAAAACAATCAAAGATTTACCCCCATTTTTTACAGAAATGTAGATAACCAGGAGAACCCCAAATCACTTATCCTCAATTGCTCCAATCCCGATCCCTCAATTAGAATCTTCCATGCCGGCATCGAATCATCCATAGACTGATTAATCCTATCACTCCTCTTCACCGCATTCACAGGCTATACCCACCAATTTAATCCAATCAAATCGAATCAGGCGATATGATCGCCGCCATTATGCCTCAACCGCGAAAAAAGAATCACTATAACTCCTAAACAATTTAGTACTGTAATGAATAACAAGTGAAATACAGGAAAAGAACGCTATTCCATCATCATTATAATCCAATCATTTTTAGTCACGCATCTTATAAAGTTGTTTCCTTTTAAAAGCAAGGAAACTCACCACCCCAATTTGCAAGATCACAGCAATCCCTGCAAACAATAATCCAACCTTCTTGCCCAAATTGAGCTTGGAATTCTGCCGCTGATTGCTCCTTAATGCATTAGCTTGAGTATTAGGGTTTGTCATACGGGGTGATCGTTGAGGTGGAAGGGGCTGTGGCGATGGTGGGGGAGGCAATGGTGGAGAAGGAGGAGGTTGTGGCGATGCCGGTGGAGGAGATGGAGGAGACAACCCTACTGGCAGCAGTTTTGGTGGCGAAGCCAGAGGTAGAGCAGGAGGAGGAGAGATAGGGGAAGGAGGAGGAGAGAAAGGGGAAGGAGGAGGTGAGATAGGGGAAGAAGGAGGTGAGAGAGAGGAAGGTGGAGGAGAGAGGGGGGAAGGAGGAGGGCGAAAGATAGTGGAAGGCGGGGGAGAAAGAGTGGAAGGAGGGGGAGTTAGACGGGGAGTTGGAGAGGAAGGCGGAGGAGAGAAAGGAGAAGACGGAGGCGTAGGAGTTGGCGGTGGTTGTGGTGGAGGTTGTGGTGGCGGTTGTCGATCAATTGGATTTTGCCCATTCTGTGATTGTTGA

mRNA sequence

ATGTCAATTGCAAATAACAGAACAATTGACAAAGCTTTTCTGGTGAGTTGGACTGGAGGAGGTTGTGGCGATGCCGGTGGAGGAGATGGAGGAGACAACCCTACTGGCAGCAGTTTTGGTGGCGAAGCCAGAGGTAGAGCAGGAGGAGGAGAGATAGGGGAAGGAGGAGGAGAGAAAGGGGAAGGAGGAGGTGAGATAGGGGAAGAAGGAGGTGAGAGAGAGGAAGGTGGAGGAGAGAGGGGGGAAGGAGGAGGGCGAAAGATAGTGGAAGGCGGGGGAGAAAGAGTGGAAGGAGGGGGAGTTAGACGGGGAGTTGGAGAGGAAGGCGGAGGAGAGAAAGGAGAAGACGGAGGCGTAGGAGTTGGCGGTGGTTGTGGTGGAGGTTGTGGTGGCGGTTGTCGATCAATTGGATTTTGCCCATTCTGTGATTGTTGA

Coding sequence (CDS)

ATGTCAATTGCAAATAACAGAACAATTGACAAAGCTTTTCTGGTGAGTTGGACTGGAGGAGGTTGTGGCGATGCCGGTGGAGGAGATGGAGGAGACAACCCTACTGGCAGCAGTTTTGGTGGCGAAGCCAGAGGTAGAGCAGGAGGAGGAGAGATAGGGGAAGGAGGAGGAGAGAAAGGGGAAGGAGGAGGTGAGATAGGGGAAGAAGGAGGTGAGAGAGAGGAAGGTGGAGGAGAGAGGGGGGAAGGAGGAGGGCGAAAGATAGTGGAAGGCGGGGGAGAAAGAGTGGAAGGAGGGGGAGTTAGACGGGGAGTTGGAGAGGAAGGCGGAGGAGAGAAAGGAGAAGACGGAGGCGTAGGAGTTGGCGGTGGTTGTGGTGGAGGTTGTGGTGGCGGTTGTCGATCAATTGGATTTTGCCCATTCTGTGATTGTTGA

Protein sequence

MSIANNRTIDKAFLVSWTGGGCGDAGGGDGGDNPTGSSFGGEARGRAGGGEIGEGGGEKGEGGGEIGEEGGEREEGGGERGEGGGRKIVEGGGERVEGGGVRRGVGEEGGGEKGEDGGVGVGGGCGGGCGGGCRSIGFCPFCDC
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo10047.1Spo10047.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo10047.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo10047.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo10047.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo10047.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROFILEPS51257PROKAR_LIPOPROTEINcoord: 1..22
score:

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006857 oligopeptide transport
biological_process GO:0016310 phosphorylation
biological_process GO:0009741 response to brassinosteroid
biological_process GO:0006486 protein glycosylation
cellular_component GO:0005834 heterotrimeric G-protein complex
cellular_component GO:0031985 Golgi cisterna
cellular_component GO:0000139 Golgi membrane
molecular_function GO:0016301 kinase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0005515 protein binding
molecular_function GO:0042285 xylosyltransferase activity
RNA-Seq Expression