Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGCGTCAATGGTTTGTGACGTGTAACCTATTCTCCTTTTACAGAGATCTAGACTTGACAGAGAAGCTAGGTTACTCATCTGCCGTGGCATTGCTTGGCTTTGGTCTTATCGTGGCTATCTTTAGAGTGTTTGAGATTAAGCAAGAAGCCTCCAGAGTTATGGTTTCTGCACCGCTGATTGCATTTGTGACGACACACATCTTGTTTCTAAACTTCTATGCTCTTGACTACGGTAAGTCTCTCTTCCATATGTTGATCTATCTATACATAGTTGATTAATAAGGAAGTATGATAATTCACATAACCAATAGCCATGGTCTATAAGATTTTTCCTCCGTAATATTAAAGTTCCCATAGTTCATTTGTTCTTTTGGCTGTGGGATGTAATAGACTAAATCAAAATGGCTCTTAATACCTCTTCGCTTCTTTTCCATGAAGTAGAAGATGGTCGTCCCGTTGTCGTTCCGTTATCGCTTTTGGATCAATTGAAAACAACCTCTCTGTAATTGCAGGGGTAAGGTTGCGTACGTCCGACCCCCCTTTACCCCGCTTCGTGCGGGAGCCTCTTTGAGGCAATGGGGTAATGATAATGATGAATATTAAAGTTCCCATGTTCTTGAATTTGGCAAATGGTGGTTTGCAGATCTCTTTTTTGAATTACCTGCATGGATGCCTTCTGAAATTTCTATTGCTACCTTTTCTCATACATGCATGATTAGTTCCTTTTCACACATGTTTCTGTGTTGTTTTTTCAGTTGTAGACATGATATAGAGTATATGGAAATACTCGTAGCTAAATCCATATTTGCTAATATTGCTATTCTTCATGATTATGTTCTATCTAGCTCTGTAGTTATGATGATTTTATGTTTTACATCAGCAGCTGTTTTCTAGTTGAATTATCTCCTCTACTTGTATTCTATCTTAACTTTATTATAGGCCCCTAATTAACGATTAAGGAAGAGGGCAGGGAGGGAATAGTAGTACCAGTCTTTTTGCCCTACCGTACTACTGCTTTACACATACAATTACAAAGAAGCTCTTTGTCCCCCCCAAGAGGTGCTAATTGTTGTCATTGTAACTCCGATAGTCTGATATGAAATATTGACTACTACTTCACAGAAAAATATTAAGTCAAGTGTAGGTTAATTGACAGTTAATATTTTGACTGTTAGAATTTGATAGTTACTTTTACTACTCCACCTACAAATCTACAATATAACCAATACCAAATTTGTGAAATGCTCCAAGTATGTTCACTTTCCAAGTTTCCATGATTGACCTCTCAAGGTATTTGAGCATGGTCCACATTTCTTTAATAGAGCTAAATACGTCATCGTCATAGGCTCCAGTTTCATTGTATGTTTATCTCAGATCACAACTTTTCTCAAATATCCTCAGTAATGTCTTCTAGGAAACTAATAGTACTAGTTTGCAACTAGCTGCAGCTTCATTTCTATCCGTTCCTCTACACATTTTTTCCTTCCCACTACCCATGTAGCTAACATCTTGACTTCTTAAAACACGAGATGGGTGGCTTTAGTAGGAAAAAGATAAATCTTAGCTGCTTCAAGGCTTTGTCATCGTTCGAAAGTTTCAAACTTTTATATAAGGCGGTCTTACACAATTAGTTTCATATAGTTAAGCAATGAAATTCATTAGTTAAGCAATCAAAGCAGTCATTTCGGTAAGGCGGTCTTACACAAAAGTTGCGTTCCCAATTTGCCCGTAAATAACCAATATAGTCTATTTTTCATGACCACTTATCTGAACTTTATTTCTTCTATCCATTCAGGTCTAAACATGAAAGTTTGCTTAACCATGGGTTTGGCTCAATTTCTACTGTGGGCTATATGGGGTCGTGTGAGTCAGCATCCTTCGCGTTGGAAGTTATGGGTAGTGGTTATTGGCGGAGCTCTTTCTACCCTCTTGGTGATTTATGATTTCCCACCTTATTGGGAACTTGTAGATGCCCTTGCTGTTTGGCATGCCATTACCATTCCTCTTTCCTACCTTTGGTGGAGCTTCATTAAGGATGATGCAGAGTTCCGAACATTGACTCTATTGAAGAAGGCCAAGTAG ATGATGCGTCAATGGTTTGTGACGTGTAACCTATTCTCCTTTTACAGAGATCTAGACTTGACAGAGAAGCTAGGTTACTCATCTGCCGTGGCATTGCTTGGCTTTGGTCTTATCGTGGCTATCTTTAGAGTGTTTGAGATTAAGCAAGAAGCCTCCAGAGTTATGGTTTCTGCACCGCTGATTGCATTTGTGACGACACACATCTTGTTTCTAAACTTCTATGCTCTTGACTACGGTCTAAACATGAAAGTTTGCTTAACCATGGGTTTGGCTCAATTTCTACTGTGGGCTATATGGGGTCGTGTGAGTCAGCATCCTTCGCGTTGGAAGTTATGGGTAGTGGTTATTGGCGGAGCTCTTTCTACCCTCTTGGTGATTTATGATTTCCCACCTTATTGGGAACTTGTAGATGCCCTTGCTGTTTGGCATGCCATTACCATTCCTCTTTCCTACCTTTGGTGGAGCTTCATTAAGGATGATGCAGAGTTCCGAACATTGACTCTATTGAAGAAGGCCAAGTAG ATGATGCGTCAATGGTTTGTGACGTGTAACCTATTCTCCTTTTACAGAGATCTAGACTTGACAGAGAAGCTAGGTTACTCATCTGCCGTGGCATTGCTTGGCTTTGGTCTTATCGTGGCTATCTTTAGAGTGTTTGAGATTAAGCAAGAAGCCTCCAGAGTTATGGTTTCTGCACCGCTGATTGCATTTGTGACGACACACATCTTGTTTCTAAACTTCTATGCTCTTGACTACGGTCTAAACATGAAAGTTTGCTTAACCATGGGTTTGGCTCAATTTCTACTGTGGGCTATATGGGGTCGTGTGAGTCAGCATCCTTCGCGTTGGAAGTTATGGGTAGTGGTTATTGGCGGAGCTCTTTCTACCCTCTTGGTGATTTATGATTTCCCACCTTATTGGGAACTTGTAGATGCCCTTGCTGTTTGGCATGCCATTACCATTCCTCTTTCCTACCTTTGGTGGAGCTTCATTAAGGATGATGCAGAGTTCCGAACATTGACTCTATTGAAGAAGGCCAAGTAG MMRQWFVTCNLFSFYRDLDLTEKLGYSSAVALLGFGLIVAIFRVFEIKQEASRVMVSAPLIAFVTTHILFLNFYALDYGLNMKVCLTMGLAQFLLWAIWGRVSQHPSRWKLWVVVIGGALSTLLVIYDFPPYWELVDALAVWHAITIPLSYLWWSFIKDDAEFRTLTLLKKAK Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo09914.1 vs. NCBI nr
Match: gi|902126156|gb|KNA04104.1| (hypothetical protein SOVF_202770 [Spinacia oleracea]) HSP 1 Score: 320.9 bits (821), Expect = 1.400e-84 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1
BLAST of Spo09914.1 vs. NCBI nr
Match: gi|731363586|ref|XP_010693511.1| (PREDICTED: post-GPI attachment to proteins factor 3-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 292.0 bits (746), Expect = 7.000e-76 Identity = 146/172 (84.88%), Postives = 152/172 (88.37%), Query Frame = 1
BLAST of Spo09914.1 vs. NCBI nr
Match: gi|225455483|ref|XP_002280194.1| (PREDICTED: post-GPI attachment to proteins factor 3 [Vitis vinifera]) HSP 1 Score: 255.4 bits (651), Expect = 7.300e-65 Identity = 119/172 (69.19%), Postives = 138/172 (80.23%), Query Frame = 1
BLAST of Spo09914.1 vs. NCBI nr
Match: gi|460377133|ref|XP_004234349.1| (PREDICTED: post-GPI attachment to proteins factor 3 [Solanum lycopersicum]) HSP 1 Score: 254.2 bits (648), Expect = 1.600e-64 Identity = 122/172 (70.93%), Postives = 142/172 (82.56%), Query Frame = 1
BLAST of Spo09914.1 vs. NCBI nr
Match: gi|747059695|ref|XP_011076241.1| (PREDICTED: post-GPI attachment to proteins factor 3 [Sesamum indicum]) HSP 1 Score: 253.8 bits (647), Expect = 2.100e-64 Identity = 119/172 (69.19%), Postives = 142/172 (82.56%), Query Frame = 1
BLAST of Spo09914.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QA30_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_202770 PE=4 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 9.800e-85 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1
BLAST of Spo09914.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BCJ7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g066610 PE=4 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 4.900e-76 Identity = 146/172 (84.88%), Postives = 152/172 (88.37%), Query Frame = 1
BLAST of Spo09914.1 vs. UniProtKB/TrEMBL
Match: A5BYH9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0100g00360 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 5.100e-65 Identity = 119/172 (69.19%), Postives = 138/172 (80.23%), Query Frame = 1
BLAST of Spo09914.1 vs. UniProtKB/TrEMBL
Match: M1B4M1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014263 PE=4 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 1.100e-64 Identity = 122/172 (70.93%), Postives = 142/172 (82.56%), Query Frame = 1
BLAST of Spo09914.1 vs. UniProtKB/TrEMBL
Match: K4BFA2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 1.100e-64 Identity = 122/172 (70.93%), Postives = 142/172 (82.56%), Query Frame = 1
BLAST of Spo09914.1 vs. ExPASy Swiss-Prot
Match: PGAP3_DANRE (Post-GPI attachment to proteins factor 3 OS=Danio rerio GN=pgap3 PE=2 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 7.900e-19 Identity = 51/148 (34.46%), Postives = 84/148 (56.76%), Query Frame = 1
BLAST of Spo09914.1 vs. ExPASy Swiss-Prot
Match: PGAP3_BOVIN (Post-GPI attachment to proteins factor 3 OS=Bos taurus GN=PGAP3 PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 5.600e-17 Identity = 53/161 (32.92%), Postives = 89/161 (55.28%), Query Frame = 1
BLAST of Spo09914.1 vs. ExPASy Swiss-Prot
Match: PGAP3_XENLA (Post-GPI attachment to proteins factor 3 OS=Xenopus laevis GN=pgap3 PE=2 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 4.800e-16 Identity = 50/149 (33.56%), Postives = 77/149 (51.68%), Query Frame = 1
BLAST of Spo09914.1 vs. ExPASy Swiss-Prot
Match: PGAP3_MOUSE (Post-GPI attachment to proteins factor 3 OS=Mus musculus GN=Pgap3 PE=2 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 4.800e-16 Identity = 53/161 (32.92%), Postives = 87/161 (54.04%), Query Frame = 1
BLAST of Spo09914.1 vs. ExPASy Swiss-Prot
Match: PGAP3_XENTR (Post-GPI attachment to proteins factor 3 OS=Xenopus tropicalis GN=pgap3 PE=2 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 8.100e-16 Identity = 48/148 (32.43%), Postives = 73/148 (49.32%), Query Frame = 1
BLAST of Spo09914.1 vs. TAIR (Arabidopsis)
Match: AT1G16560.1 (Per1-like family protein) HSP 1 Score: 234.2 bits (596), Expect = 6.100e-62 Identity = 113/172 (65.70%), Postives = 134/172 (77.91%), Query Frame = 1
BLAST of Spo09914.1 vs. TAIR (Arabidopsis)
Match: AT5G62130.2 (Per1-like family protein) HSP 1 Score: 173.7 bits (439), Expect = 9.800e-44 Identity = 81/158 (51.27%), Postives = 111/158 (70.25%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo09914.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo09914.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo09914.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo09914.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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