Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAACTGTGTTACCTCCGCTAGATTGTCCACTTCTAATAAACGTGATTGACCCAATTCTGGATCATCTTCCCGGACCCAATCACCAAAGGTGCCTGATGCTGAATGCGGATCTCTTACTCCGGGGTGCTTACCCTTACTTATCGGGTTCGAATGCCCATTGGATGTAAATGGGTGTTCAAGATGAGGGATGTAATAGCTAAAGCTATGCTTTTGGATCTGCGATGCCGGAGGGGCACCTCCGATTTCTGGGGCAGATTCAGTATCATTGATAATACTAGACATGCTGCTTCAAAATGTTAGACCCTTAGTAAGCAGAGGACCGCTTTAGCGACTTCTCCTCCTTTTTACCGGGAACAGCCGTCTGATGGAAAACAACTTTCACGTTCGGGATCAACTCATTCATGTTGCTGTTGTTCATAAAGCAACTGGGGTGTCAATGATGCATGAATTTGCTTGATATTGTTGTATATATACATACATTTTCATTCAGTATCTAATCTGATCATTTGCTGTTTATTTGATACCTAATTATGTAGTCCTTGATAAATTCAACTTCTTTTGTCCAGCAGTTCTCTTCTGTGTGGTCTTCTCTTCAGTCACAAGAAACATTTTTATCATTTTAATAGTTCATGGGAGCTCAAAGTTTGCTTACAAGACTTTCCGCAAATGCCTATGTGCCTTCTTTCAAGGATTTTAAAGGCACACCGTTCAATACCTCAATCCCTCGTTTTCTTCAACCCACTAAATGGAGCTCTATGCCAGCCGATCATACGTATGGTTTAGCTCCTTGTAGAATTAGGAGCAGTAAAAGACCATTCTTATGTGCAGTCAGCTCTCAGGAAGTACAAGAGTTTCCTGCCGATTCAGGATGTCACGATTTGAAGCCTAATCGGAAGAGGTTAGCAGTTTTTGTGTCCGGTGGAGGTTCCAATTTCAAGGCAATTCATGAAGCAACACTCAAGGGATCAGTACTCGGAGATGTAGTTGTGTTGGTTACCAACAAAGGAGGTAAAATATCGTAACTCTTACTTTTGCATTCACAAGAAGAACTCTTATAGAAGATCACTTTTCCCTCACAGTTTACCCCCTTCTTTTTCTATATCTATGTTTTTTGTATGTATTTGTTACATTTATATTTTATTGTGTTTCATATTTTCTCGATGTAGCTTTTTTTCACAAACTTGCTTGCTAGTTTTCATTCAGGAAGCATTTAAATTAAAATCATCTGATATGCAAATGAATAACCGACTTTGGTATGCACCGTGTGTGAATGACAGACTGCGGAGGTGCAGCCTATGCAAAAGAATATGGTATTCCAGTCGTCTTGTTTCCAAGAAGAAAAGAACCACAACCATTTTCACCGAGTGATCTTGTAACTACTCTTAGGTTAGTTTCTTGATGATACTTTGTCTATTTTACTTTCTGGGTTCATTTTTATCTTTCCAAGTTCATCAAAAAAAACATGCTCACAGTAAGTATTCCTATAGCTTCTGATTATCGTGGGTATGCTTTGTGAATTGCAATTGAATTCTATGCAGGGAATTCAAAGTGGACTTCATACTTCTTGCTGGATATTTAAAACTTATACCAGTTGAGTTGGTTCAACATTATCAAAAGCGGATATTAAATATACATCCTTCACTTCTACCAGCTTTTGGTGGCAAAGGCTATTATGGGCTGAAGGTTCATAAAGCAGTTATTTCTTCTGGAGCAAGGTAATATTTTCACCAGGGATTACCTTTTAGTTACTCGTAATGTTATTTTCATTTGTTGTGCAGAAAAGAGAAGCAATGTAGATTTTAGACCACTATAGTTTTTTGCACATTTATGTCACACATTAGATTATTGTGAGAGAAAGAGGAGGTAATCAATTATTTTCTAGACCGTTGCATGTACTCTAATTTTAATGCAATGCCTACCAAGTAGCTGGAACATCTTCCCGATTCTCAGTTTCCATGTACTACTATTAAAATATCATACTGTCATTTTCTGGGTGCTCAAATATAGCAAAAGGTGCTGAGGAGATGGTCCTTTCACGAATATGTAATGTTTGATGTGAAATGTTTGTATCTGGACAATAGCTTTTGTCTTTTGATTTCTACATTTACTTTGCCCTTGACTAGTTGACTGGTTATGTTCACAACATGTCAATACCTAACCCAGATTTCTGAGACTATGGAATCACCGTGGTTTGGTTCGAGCCAGTTGTTTTTAACCATAGCACTAAATGAAGTGCAACTACTTAATTTATACTCCCTCCATTTCGAAATAATAGGGATAATTTGACTTATGAGTTATGACACTATTTACAAATTTCAATTTGACTATCATTTGTAATTTATGGGTAAGGAAAAATAGTCGTGTGAGTTCTTGTTTGGTTCGTCTCGATATGTACTTTCGGAATATCAATTTTTATAATTTTTACGAATACATAATTAGAGATATCAATGTCAAAACATTACATTGGCAAGCGTGAAAAGATAAACTGTTCCCCTTATTTCGAAACGGAGGGAGTACAAAGTATATATGAGTATACCGAGGAAATTTGACTTGATACTTGATGTCTTAACCCTTCTTGGTTTTTCTTTATTGCCTAGATACTCCGGTCCTACGATCCATTTTGTTGACGAGGAATTTGACACGGGTTGGATCCTTGCCCAGCGAGTTGTGCCTGTGTGTGCTTTTGACACTCCAGAGGAGTTGGCAGCTCGCGTGCTACATGAGGTAAAGTTAACAGCATAGTCAATTTGCAATAAGCCTGTTGATAATATGTTTGCTGAATAATATCTTATACAAATTCATTTTATAGGAGCATCATTTATATGTGGACGTAGTTGCAGCATTATGTGAAGACCGGATAATTTGGAGGGATGATGGTGTTCCGCTCATCCAAAGTAAAGAAGATCCACAACAATACAGTTAGTTTAGCTTTGGCTTTTAGGAGATCAAGTTCAGTCTGCATTACCTTTTGTTCTATAAAAATTAGCCAGTCTTTAGTTTTTGGGCTAATTCAGAATCTGACAAATATTTGAGAATTAAAACTACTGACCATTTAAGAATTGTACAATCAATTATATATACATACTTGGATCACCTATAAACACTGAAGTATTATGAAGTTGTATTATTCCAATTTTTTTGGGATGGATTGGAAACAGGGAAATGTTGATTCATTGACCATGTTGGAGATTGAACACTTTTTTAAGTTCCTGTAATGATAAGTTAATGATAAATTAGCAGGTGTAACTTTTTTATTTGCACTATAC ATGGGAACTGTGTTACCTCCGCTAGATTGTCCACTTCTAATAAACGTGATTGACCCAATTCTGGATCATCTTCCCGGACCCAATCACCAAAGCAGTTCTCTTCTGTGTGGTCTTCTCTTCAGTCACAAGAAACATTTTTATCATTTTAATAGTTCATGGGAGCTCAAAGTTTGCTTACAAGACTTTCCGCAAATGCCTATGTGCCTTCTTTCAAGGATTTTAAAGGCACACCGTTCAATACCTCAATCCCTCGTTTTCTTCAACCCACTAAATGGAGCTCTATGCCAGCCGATCATACTCAGCTCTCAGGAAGTACAAGAGTTTCCTGCCGATTCAGGATGTCACGATTTGAAGCCTAATCGGAAGAGGTTAGCAGTTTTTGTGTCCGGTGGAGGTTCCAATTTCAAGGCAATTCATGAAGCAACACTCAAGGGATCAGTACTCGGAGATGTAGTTGTGTTGGTTACCAACAAAGGAGACTGCGGAGGTGCAGCCTATGCAAAAGAATATGGTATTCCAGTCGTCTTGTTTCCAAGAAGAAAAGAACCACAACCATTTTCACCGAGTGATCTTGTAACTACTCTTAGGGAATTCAAAGTGGACTTCATACTTCTTGCTGGATATTTAAAACTTATACCAGTTGAGTTGGTTCAACATTATCAAAAGCGGATATTAAATATACATCCTTCACTTCTACCAGCTTTTGGTGGCAAAGGCTATTATGGGCTGAAGGTTCATAAAGCAGTTATTTCTTCTGGAGCAAGATACTCCGGTCCTACGATCCATTTTGTTGACGAGGAATTTGACACGGGTTGGATCCTTGCCCAGCGAGTTGTGCCTGTGTGTGCTTTTGACACTCCAGAGGAGTTGGCAGCTCGCGTGCTACATGAGGAGCATCATTTATATGTGGACGTAGTTGCAGCATTATGTGAAGACCGGATAATTTGGAGGGATGATGGTGTTCCGCTCATCCAAAGTAAAGAAGATCCACAACAATACAGTTAGTTTAGCTTTGGCTTTTAGGAGATCAAGTTCAGTCTGCATTACCTTTTGTTCTATAAAAATTAGCCAGTCTTTAGTTTTTGGGCTAATTCAGAATCTGACAAATATTTGAGAATTAAAACTACTGACCATTTAAGAATTGTACAATCAATTATATATACATACTTGGATCACCTATAAACACTGAAGTATTATGAAGTTGTATTATTCCAATTTTTTTGGGATGGATTGGAAACAGGGAAATGTTGATTCATTGACCATGTTGGAGATTGAACACTTTTTTAAGTTCCTGTAATGATAAGTTAATGATAAATTAGCAGGTGTAACTTTTTTATTTGCACTATAC ATGGGAACTGTGTTACCTCCGCTAGATTGTCCACTTCTAATAAACGTGATTGACCCAATTCTGGATCATCTTCCCGGACCCAATCACCAAAGCAGTTCTCTTCTGTGTGGTCTTCTCTTCAGTCACAAGAAACATTTTTATCATTTTAATAGTTCATGGGAGCTCAAAGTTTGCTTACAAGACTTTCCGCAAATGCCTATGTGCCTTCTTTCAAGGATTTTAAAGGCACACCGTTCAATACCTCAATCCCTCGTTTTCTTCAACCCACTAAATGGAGCTCTATGCCAGCCGATCATACTCAGCTCTCAGGAAGTACAAGAGTTTCCTGCCGATTCAGGATGTCACGATTTGAAGCCTAATCGGAAGAGGTTAGCAGTTTTTGTGTCCGGTGGAGGTTCCAATTTCAAGGCAATTCATGAAGCAACACTCAAGGGATCAGTACTCGGAGATGTAGTTGTGTTGGTTACCAACAAAGGAGACTGCGGAGGTGCAGCCTATGCAAAAGAATATGGTATTCCAGTCGTCTTGTTTCCAAGAAGAAAAGAACCACAACCATTTTCACCGAGTGATCTTGTAACTACTCTTAGGGAATTCAAAGTGGACTTCATACTTCTTGCTGGATATTTAAAACTTATACCAGTTGAGTTGGTTCAACATTATCAAAAGCGGATATTAAATATACATCCTTCACTTCTACCAGCTTTTGGTGGCAAAGGCTATTATGGGCTGAAGGTTCATAAAGCAGTTATTTCTTCTGGAGCAAGATACTCCGGTCCTACGATCCATTTTGTTGACGAGGAATTTGACACGGGTTGGATCCTTGCCCAGCGAGTTGTGCCTGTGTGTGCTTTTGACACTCCAGAGGAGTTGGCAGCTCGCGTGCTACATGAGGAGCATCATTTATATGTGGACGTAGTTGCAGCATTATGTGAAGACCGGATAATTTGGAGGGATGATGGTGTTCCGCTCATCCAAAGTAAAGAAGATCCACAACAATACAGTTAG MGTVLPPLDCPLLINVIDPILDHLPGPNHQSSSLLCGLLFSHKKHFYHFNSSWELKVCLQDFPQMPMCLLSRILKAHRSIPQSLVFFNPLNGALCQPIILSSQEVQEFPADSGCHDLKPNRKRLAVFVSGGGSNFKAIHEATLKGSVLGDVVVLVTNKGDCGGAAYAKEYGIPVVLFPRRKEPQPFSPSDLVTTLREFKVDFILLAGYLKLIPVELVQHYQKRILNIHPSLLPAFGGKGYYGLKVHKAVISSGARYSGPTIHFVDEEFDTGWILAQRVVPVCAFDTPEELAARVLHEEHHLYVDVVAALCEDRIIWRDDGVPLIQSKEDPQQYS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo09731.1 vs. NCBI nr
Match: gi|902193546|gb|KNA12322.1| (hypothetical protein SOVF_126920 [Spinacia oleracea]) HSP 1 Score: 473.0 bits (1216), Expect = 4.300e-130 Identity = 232/235 (98.72%), Postives = 233/235 (99.15%), Query Frame = 1
BLAST of Spo09731.1 vs. NCBI nr
Match: gi|731334684|ref|XP_010678344.1| (PREDICTED: phosphoribosylglycinamide formyltransferase, chloroplastic [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 415.2 bits (1066), Expect = 1.100e-112 Identity = 201/235 (85.53%), Postives = 214/235 (91.06%), Query Frame = 1
BLAST of Spo09731.1 vs. NCBI nr
Match: gi|747078144|ref|XP_011086228.1| (PREDICTED: phosphoribosylglycinamide formyltransferase, chloroplastic-like isoform X2 [Sesamum indicum]) HSP 1 Score: 339.7 bits (870), Expect = 5.700e-90 Identity = 172/235 (73.19%), Postives = 196/235 (83.40%), Query Frame = 1
BLAST of Spo09731.1 vs. NCBI nr
Match: gi|643732025|gb|KDP39217.1| (hypothetical protein JCGZ_00974 [Jatropha curcas]) HSP 1 Score: 337.8 bits (865), Expect = 2.100e-89 Identity = 166/215 (77.21%), Postives = 186/215 (86.51%), Query Frame = 1
BLAST of Spo09731.1 vs. NCBI nr
Match: gi|802591108|ref|XP_012071245.1| (PREDICTED: phosphoribosylglycinamide formyltransferase, chloroplastic [Jatropha curcas]) HSP 1 Score: 337.8 bits (865), Expect = 2.100e-89 Identity = 166/215 (77.21%), Postives = 186/215 (86.51%), Query Frame = 1
BLAST of Spo09731.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QYI2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_126920 PE=3 SV=1) HSP 1 Score: 473.0 bits (1216), Expect = 3.000e-130 Identity = 232/235 (98.72%), Postives = 233/235 (99.15%), Query Frame = 1
BLAST of Spo09731.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F4Y1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g113340 PE=3 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 7.400e-113 Identity = 201/235 (85.53%), Postives = 214/235 (91.06%), Query Frame = 1
BLAST of Spo09731.1 vs. UniProtKB/TrEMBL
Match: A0A067KSY7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00974 PE=3 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 1.500e-89 Identity = 166/215 (77.21%), Postives = 186/215 (86.51%), Query Frame = 1
BLAST of Spo09731.1 vs. UniProtKB/TrEMBL
Match: A0A0S3RJX4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G045700 PE=3 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 5.700e-89 Identity = 161/214 (75.23%), Postives = 189/214 (88.32%), Query Frame = 1
BLAST of Spo09731.1 vs. UniProtKB/TrEMBL
Match: A0A0L9UVR5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g033300 PE=3 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 5.700e-89 Identity = 161/214 (75.23%), Postives = 189/214 (88.32%), Query Frame = 1
BLAST of Spo09731.1 vs. ExPASy Swiss-Prot
Match: PUR3_VIGUN (Phosphoribosylglycinamide formyltransferase, chloroplastic OS=Vigna unguiculata GN=PUR3 PE=2 SV=2) HSP 1 Score: 332.0 bits (850), Expect = 7.400e-90 Identity = 159/214 (74.30%), Postives = 189/214 (88.32%), Query Frame = 1
BLAST of Spo09731.1 vs. ExPASy Swiss-Prot
Match: PUR3_ARATH (Phosphoribosylglycinamide formyltransferase, chloroplastic OS=Arabidopsis thaliana GN=PUR3 PE=2 SV=2) HSP 1 Score: 322.4 bits (825), Expect = 5.800e-87 Identity = 159/239 (66.53%), Postives = 191/239 (79.92%), Query Frame = 1
BLAST of Spo09731.1 vs. ExPASy Swiss-Prot
Match: PUR3_SOYBN (Phosphoribosylglycinamide formyltransferase, chloroplastic OS=Glycine max GN=PUR3 PE=2 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 3.200e-69 Identity = 137/214 (64.02%), Postives = 168/214 (78.50%), Query Frame = 1
BLAST of Spo09731.1 vs. ExPASy Swiss-Prot
Match: PUR3_HAEIN (Phosphoribosylglycinamide formyltransferase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=purN PE=3 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.600e-28 Identity = 70/199 (35.18%), Postives = 109/199 (54.77%), Query Frame = 1
BLAST of Spo09731.1 vs. ExPASy Swiss-Prot
Match: PUR2_BOVIN (Trifunctional purine biosynthetic protein adenosine-3 OS=Bos taurus GN=GART PE=2 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 3.600e-28 Identity = 79/274 (28.83%), Postives = 139/274 (50.73%), Query Frame = 1
BLAST of Spo09731.1 vs. TAIR (Arabidopsis)
Match: AT1G31220.1 (Formyl transferase) HSP 1 Score: 322.4 bits (825), Expect = 3.300e-88 Identity = 159/239 (66.53%), Postives = 191/239 (79.92%), Query Frame = 1
BLAST of Spo09731.1 vs. TAIR (Arabidopsis)
Match: AT5G47435.2 (formyltetrahydrofolate deformylase, putative) HSP 1 Score: 66.2 bits (160), Expect = 4.300e-11 Identity = 43/150 (28.67%), Postives = 72/150 (48.00%), Query Frame = 1
BLAST of Spo09731.1 vs. TAIR (Arabidopsis)
Match: AT4G17360.1 (Formyl transferase) HSP 1 Score: 63.9 bits (154), Expect = 2.100e-10 Identity = 36/115 (31.30%), Postives = 57/115 (49.57%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo09731.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo09731.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo09731.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo09731.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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