Spo09389 (gene)

Overview
NameSpo09389
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPre-mRNA-splicing factor ISY1
Locationchr4 : 3991637 .. 3995518 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAACAATATTTATAAAACCACTTCAACTACCGGCAAGCGGTAAGCAAAGGGATCGTCCCAAAGAAACGGTGAATTATTGAGTTGGAAGTCAATCTAGTTCGATCAAGGATTTGTTTTGAATTGTCACTTTTTAAGAGTCTAAAAACAAATAAGGAACTATGTAAAATTGAATCAAGAAAGGGAAACGTTAGGGAGTTGGGGATAGCCTAGGGAAACCGGGGGAATCAATTCAACTATTTAGCAATGGTGATCATGCAACGAAATGGTGATTAGGCAAATGGCATCTAAAGACGAACCCGCCACCTCTCGGATAGGGAACGCTAAGCGTCTAATCCACGGAAGAGCTTTCGCCTAATCCTAGACTAAACTAACTAGCATATAATAGGTACCGCCATTTGATCAACACAAGATACGTCCACAATGTCTTGCCAAACCTATCCTATGGTTCCACGGAAATCTAATCGAATAGCATTTGCAACTACCACTCAACTAGCATGGATTTCCTATCATCAAATCTTATTTAATCACATGAATCAACCAACAATCAATAATCTATTTCCCCTAATTCATCCCCTAGTTTCTCCCCTTTCCCTAACCTAAAACTACTCACTAATCATCCTAACAATCAAGCTATCCATTAGTTCAAAACTAGCTATCATGAAATTAAAGGAGAAGAAGTAGAGAATACGAAACTCAATTGCACAATCAAATCAAAAACTGAAAATCAAAGTAACAAGCAAAATTGAAATCAAGAACTCAAGGTATTAAGGAATTGCAAAACAATTATCAACTAAGCAAATGCAAGAATTAAAGAACTAAGAATTCAATTGCATAAAGAAGAGAAGAGTTGAAGATAATTACTGAATTGATGCTTGGAATTAAAGAGTTTCTCTCTCTAGATTGAAGAACAAAATCACAAAACCTCTAGAATTGAAAGTGTAAAAATATGAAATGTAAAATATGAAAGCGTAAAATGAAAATAATAAAAAATCCTATTCATACTAAACCCCAAAAATAAGAGTTTTAAACTCGAAAACTGAATCCCGCGCAGCCGTGCGATCGGGCAGACCCAGGTGCGATCGCATCAATGCGATCGTGCTGTGCATCAATGCGATCGTGCTGTGCATCAATGCGAACGGGCCCTGCGACGATTCTTCTCCTTCGTGCCGTGCGAACGTGCCCAACAACCGTGCGATCGCACGGCTGTAACTTGGCTAAATCTCAGAAAATCCTCGTGTGCTCGCACAGGAATTTAGTGCGAGCCCACCGAAATTCCGTGCGAGCGGGCTCCTCTGCGGTGCGATCGCACAAAATCACTCATAGTTCCTGCATCGTTTTTGCGGATTTGTGCGAGCACACGAATTTGAGGCACGAGCGCACACACTGCCTTGACTTTTGGAGCCAACTCTGTAGACCCGTGCGAGCGCACAAAATGTCCGTGCGATCGCACGGCACCTGCTCGAGCAAATCTCAGCTGTTTTTCCATCATTTTCAACATTATCACCTGAAAAGCACAAAGATGGAAAAGGGGAATAAAAGAACAGCAAAACTATATAATACTAACAAAAAAGCATAATAAAACTCTATAAAATCCTAGCCTAGAGCGACATAAATGCCGCTCATCATTAATTAATACTGAACCGCATTTATTAGACTTAGTATTAAATGCATATTTGGACCAAGGGCATTATTTCCTTCAAATCCCTATCCTGGTTTATAAAAAAGAGGACTTGAGACTCAGCAGATGTCAACATGTGGTACACAACTATATCAACAGTAAAGAAAAATTCCCTAACCATATAGAACACTCTTCTTGAGGGGCAAATGATGTGGTTGAAAATATTACTGGTCTACCCTAGGCCAACGACGATGCAACAAGTGACATCCCTCATGACAAGTGACCCACATCCAGGGCCTACAAATAGGTCTCAATAGCTAGATTATAAAAGAAGGCCCATGCGTCTTCCAGCTTGATGTGGATAAAAACACTAGTCCATCTTGGACCAATTGCCAAACGACACCTGGCACCCTCTATGCTTACCTATTACATGTTCCAAATATGAATGAACAGAAGCTGGATGAAGACCAAAAGGCCTAACTACCTAAGGCCCAATCTCAAGAGGCACACTAAGCCCTCTATCCAAGTGTATGATGGGGACACATGTCCTTATCTCTGAAATTAACCAATCAGATAGCTAGGGTTTGGGAACAAATCCCAAAACCCTAGCCTTATAAATAGTTCAGATCCCAAGATGGAAAGAGCAATTAATTCATTCCCACCTACCTTAATTATTTTGCTCTGCCTTCTCTCTAGAAGTTAATTTTTCTCTCTATCAAATACTTACTTAGGCATCAGAGGGAATATTCCTACAAAAATATTCTTGTTTTGCAGGTTGTAAGAAGATCGTGCCAACGCATACCTGATACCTCCGTGGTAAAGGTGACACGCCAGCACCGATAAAGTTCTCACAACAATTTGGATTCTTGGGAAATCAAACATGTCTACCAAGAAACTAACAAGATATCAAATTTCGTTGTAATAGTCATAATTATCTTTAATTGTATAAAACAATTACTTAGAAATTTTCTCCGTGCGGAGGGTTTACTACGTTTATTTTTCTTACCTTATACTTTGTATTTTTTTTTAAAAAGAAATCCTTATTTGACACCAACAATGAAGTAGATTAATAGTAAATCCTAATTTTTTTTAAAGAAATCCTAATTTTTTTTTTTTTTTTTTGAGGGGTAAAGAAATCCTAATTTGCCAAGAAGTAAACACGGTAAACAAAACCAACACTTTCCCAAATTCTTTCATAAAAAAGAAAAAAAGAAAATTTCCAAAATTATAAACCCCTATACCCTCTCTCCTTCGAGTTCTGATAATCATACGAGTGTAATAAATCTAGGGTTTGTTTTCTCCGTTTTCGTCTTCTCTCTGTATCAACAACCAGATCATCTGCTCCACCTTCTCAAGCTCCACAATGGCGAGAAACGAAGAGAAAGCGCAGTCCATGCTCAATCGCTTCATCACTATGAAGCAAGACGAGAAGAAGAAGCCTAAAGAACGCCGCCCCTTCTTAGCCTCAGAGTGTCGCGACCTCGCCGAAGCAGATAAGTGGAGGCAGCAAATCATGCGAGAAATTGGCCGAAAAGTCGCAGAAATCCAGAACGAAGGCCTCGGAGAACATCGTCTTCGTGACCTCAATGACGAAATCAACAAGCTAATTCGAGAGAAATCGCACTGGGAGCGTCGAATTATTGATCTGGGAGGTCCGAATTATACGAAGCAATCGGCTAAGATGACTGATTTGGAAGGTAATATTGTTGATGTACCGAACCCTAGCGGTCGAGGTCCTGGATATCGGTACTTTGGAGCGGCGAAGAAGCTTCCGGGAGTGAGAGAGTTGTTCGAAAAGCCGCCGGAGTTGAGGAAGAGGCGGACGAGGTATGATATATACAGGAGGATTGATGCGAGTTATTATGGTTATAGGGATGAGGAAGATGGAGTTTTGGTGAAGCTGGAAGCACCGGCAGAGGTGGTTATGAGGGAGATGGCGGTGGAGGAATGGAATTTGATGGAGGAGATTAAGAGGGAAGCGAAGAAGGCAGTGAAGAGTGGCGAGGTGGCAAATGTGACGGATATTTTGTTTGAGGAAGAGGAGGAGGTTGTGGAGGAGGAGAGGAGAGAGAAGGAGAGGCTTGATGAAAATGATGCAATGCAGAAGGAGTTTGTGGTGCACGTGCCATTGCCGGATGAGAGGGAGATCGAAAGGATGGTTGTGGAGAAGAAGAAGTTGGAATTGTTGAGTAAGTATACAAGTGAGAATTTCTTGGAGGAGCAGACTGAAGCTAAGGCCATGTTGAATATCAATAGATAG

mRNA sequence

ATGCAAACAATATTTATAAAACCACTTCAACTACCGGCAAGCGGTAAGCAAAGGGATCGTCCCAAAGAAACGGGTTTGTTTTCTCCGTTTTCGTCTTCTCTCTGTATCAACAACCAGATCATCTGCTCCACCTTCTCAAGCTCCACAATGGCGAGAAACGAAGAGAAAGCGCAGTCCATGCTCAATCGCTTCATCACTATGAAGCAAGACGAGAAGAAGAAGCCTAAAGAACGCCGCCCCTTCTTAGCCTCAGAGTGTCGCGACCTCGCCGAAGCAGATAAGTGGAGGCAGCAAATCATGCGAGAAATTGGCCGAAAAGTCGCAGAAATCCAGAACGAAGGCCTCGGAGAACATCGTCTTCGTGACCTCAATGACGAAATCAACAAGCTAATTCGAGAGAAATCGCACTGGGAGCGTCGAATTATTGATCTGGGAGGTCCGAATTATACGAAGCAATCGGCTAAGATGACTGATTTGGAAGGTAATATTGTTGATGTACCGAACCCTAGCGGTCGAGGTCCTGGATATCGGTACTTTGGAGCGGCGAAGAAGCTTCCGGGAGTGAGAGAGTTGTTCGAAAAGCCGCCGGAGTTGAGGAAGAGGCGGACGAGGTATGATATATACAGGAGGATTGATGCGAGTTATTATGGTTATAGGGATGAGGAAGATGGAGTTTTGGTGAAGCTGGAAGCACCGGCAGAGGTGGTTATGAGGGAGATGGCGGTGGAGGAATGGAATTTGATGGAGGAGATTAAGAGGGAAGCGAAGAAGGCAGTGAAGAGTGGCGAGGTGGCAAATGTGACGGATATTTTGTTTGAGGAAGAGGAGGAGGTTGTGGAGGAGGAGAGGAGAGAGAAGGAGAGGCTTGATGAAAATGATGCAATGCAGAAGGAGTTTGTGGTGCACGTGCCATTGCCGGATGAGAGGGAGATCGAAAGGATGGTTGTGGAGAAGAAGAAGTTGGAATTGTTGAGTAAGTATACAAGTGAGAATTTCTTGGAGGAGCAGACTGAAGCTAAGGCCATGTTGAATATCAATAGATAG

Coding sequence (CDS)

ATGCAAACAATATTTATAAAACCACTTCAACTACCGGCAAGCGGTAAGCAAAGGGATCGTCCCAAAGAAACGGGTTTGTTTTCTCCGTTTTCGTCTTCTCTCTGTATCAACAACCAGATCATCTGCTCCACCTTCTCAAGCTCCACAATGGCGAGAAACGAAGAGAAAGCGCAGTCCATGCTCAATCGCTTCATCACTATGAAGCAAGACGAGAAGAAGAAGCCTAAAGAACGCCGCCCCTTCTTAGCCTCAGAGTGTCGCGACCTCGCCGAAGCAGATAAGTGGAGGCAGCAAATCATGCGAGAAATTGGCCGAAAAGTCGCAGAAATCCAGAACGAAGGCCTCGGAGAACATCGTCTTCGTGACCTCAATGACGAAATCAACAAGCTAATTCGAGAGAAATCGCACTGGGAGCGTCGAATTATTGATCTGGGAGGTCCGAATTATACGAAGCAATCGGCTAAGATGACTGATTTGGAAGGTAATATTGTTGATGTACCGAACCCTAGCGGTCGAGGTCCTGGATATCGGTACTTTGGAGCGGCGAAGAAGCTTCCGGGAGTGAGAGAGTTGTTCGAAAAGCCGCCGGAGTTGAGGAAGAGGCGGACGAGGTATGATATATACAGGAGGATTGATGCGAGTTATTATGGTTATAGGGATGAGGAAGATGGAGTTTTGGTGAAGCTGGAAGCACCGGCAGAGGTGGTTATGAGGGAGATGGCGGTGGAGGAATGGAATTTGATGGAGGAGATTAAGAGGGAAGCGAAGAAGGCAGTGAAGAGTGGCGAGGTGGCAAATGTGACGGATATTTTGTTTGAGGAAGAGGAGGAGGTTGTGGAGGAGGAGAGGAGAGAGAAGGAGAGGCTTGATGAAAATGATGCAATGCAGAAGGAGTTTGTGGTGCACGTGCCATTGCCGGATGAGAGGGAGATCGAAAGGATGGTTGTGGAGAAGAAGAAGTTGGAATTGTTGAGTAAGTATACAAGTGAGAATTTCTTGGAGGAGCAGACTGAAGCTAAGGCCATGTTGAATATCAATAGATAG

Protein sequence

MQTIFIKPLQLPASGKQRDRPKETGLFSPFSSSLCINNQIICSTFSSSTMARNEEKAQSMLNRFITMKQDEKKKPKERRPFLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIIDLGGPNYTKQSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYRRIDASYYGYRDEEDGVLVKLEAPAEVVMREMAVEEWNLMEEIKREAKKAVKSGEVANVTDILFEEEEEVVEEERREKERLDENDAMQKEFVVHVPLPDEREIERMVVEKKKLELLSKYTSENFLEEQTEAKAMLNINR
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo09389.1Spo09389.1mRNA


Homology
[Close]
BLAST of Spo09389.1 vs. NCBI nr
Match: gi|902155035|gb|KNA05868.1| (hypothetical protein SOVF_186390 [Spinacia oleracea])

HSP 1 Score: 573.9 bits (1478), Expect = 1.900e-160
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 1 

		  

Query: 50  MARNEEKAQSMLNRFITMKQDEKKKPKERRPFLASECRDLAEADKWRQQIMREIGRKVAE 109
           MARNEEKAQSMLNRFITMKQDEKKKPKERRPFLASECRDLAEADKWRQQIMREIGRKVAE
Sbjct: 1   MARNEEKAQSMLNRFITMKQDEKKKPKERRPFLASECRDLAEADKWRQQIMREIGRKVAE 60

Query: 110 IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIDLGGPNYTKQSAKMTDLEGNIVDVPNP 169
           IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIDLGGPNYTKQSAKMTDLEGNIVDVPNP
Sbjct: 61  IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIDLGGPNYTKQSAKMTDLEGNIVDVPNP 120

Query: 170 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYRRIDASYYGYRDEEDGVLVKL 229
           SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYRRIDASYYGYRDEEDGVLVKL
Sbjct: 121 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYRRIDASYYGYRDEEDGVLVKL 180

Query: 230 EAPAEVVMREMAVEEWNLMEEIKREAKKAVKSGEVANVTDILFEEEEEVVEEERREKERL 289
           EAPAEVVMREMAVEEWNLMEEIKREAKKAVKSGEVANVTDILFEEEEEVVEEERREKERL
Sbjct: 181 EAPAEVVMREMAVEEWNLMEEIKREAKKAVKSGEVANVTDILFEEEEEVVEEERREKERL 240

Query: 290 DENDAMQKEFVVHVPLPDEREIERMVVEKKKLELLSKYTSENFLEEQTEAKAMLNINR 348
           DENDAMQKEFVVHVPLPDEREIERMVVEKKKLELLSKYTSENFLEEQTEAKAMLNINR
Sbjct: 241 DENDAMQKEFVVHVPLPDEREIERMVVEKKKLELLSKYTSENFLEEQTEAKAMLNINR 298
[Close]
BLAST of Spo09389.1 vs. NCBI nr
Match: gi|731350184|ref|XP_010686376.1| (PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 527.7 bits (1358), Expect = 1.500e-146
Identity = 270/298 (90.60%), Postives = 284/298 (95.30%), Query Frame = 1 

		  

Query: 50  MARNEEKAQSMLNRFITMKQDEKKKPKERRPFLASECRDLAEADKWRQQIMREIGRKVAE 109
           MARNEEKAQSMLNRFITMKQDEKKKPKERRP+LASECRDLAEADKWRQQIMREIGRKVAE
Sbjct: 1   MARNEEKAQSMLNRFITMKQDEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAE 60

Query: 110 IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIDLGGPNYTKQSAKMTDLEGNIVDVPNP 169
           IQNEGLGEHRLRDLNDEINKLIREKSHWERRI+DLGGPNYTK SAKMTDLEGNIVDVPNP
Sbjct: 61  IQNEGLGEHRLRDLNDEINKLIREKSHWERRIMDLGGPNYTKHSAKMTDLEGNIVDVPNP 120

Query: 170 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYRRIDASYYGYRDEEDGVLVKL 229
           SGRGPGYRYFGAAKKLPGV+ELFEKPPELRKRRTRYDIY+RIDASYYGYRD+EDGVL KL
Sbjct: 121 SGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLEKL 180

Query: 230 EAPAEVVMREMAVEEWNLMEEIKREAKKAVKSGEVANVTDILFEEEEEVVEEERREKERL 289
           E PAE  MREMAVEEWNLMEEIKREAK+AVKSGEV NV +ILFEEEEEVVEEERREKERL
Sbjct: 181 EGPAEAAMREMAVEEWNLMEEIKREAKRAVKSGEVVNVKEILFEEEEEVVEEERREKERL 240

Query: 290 DENDAMQKEFVVHVPLPDEREIERMVVEKKKLELLSKYTSENFLEEQTEAKAMLNINR 348
            E+     EFVVHVPLPD++EIERMVVEKKK+ELLSKYTS++ LEEQTEAKAMLNI+R
Sbjct: 241 QEDQLRNNEFVVHVPLPDDKEIERMVVEKKKMELLSKYTSDDLLEEQTEAKAMLNIHR 298
[Close]
BLAST of Spo09389.1 vs. NCBI nr
Match: gi|697188029|ref|XP_009603049.1| (PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Nicotiana tomentosiformis])

HSP 1 Score: 489.6 bits (1259), Expect = 4.600e-135
Identity = 256/301 (85.05%), Postives = 274/301 (91.03%), Query Frame = 1 

		  

Query: 50  MARNEEKAQSMLNRFITMKQDEKKKPKERRPFLASECRDLAEADKWRQQIMREIGRKVAE 109
           MARNEEKAQSMLNRFITMK++EKKKPKERRP+LASECRDLAEADKWRQQIMREIGRKVAE
Sbjct: 1   MARNEEKAQSMLNRFITMKEEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAE 60

Query: 110 IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIDLGGPNYTKQSAKMTDLEGNIVDVPNP 169
           IQNEGLGEHRLRDLNDEINKLIREK HWERRII+LGGPNYTK SAKMTDLEGNIVDVPNP
Sbjct: 61  IQNEGLGEHRLRDLNDEINKLIREKGHWERRIIELGGPNYTKHSAKMTDLEGNIVDVPNP 120

Query: 170 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYRRIDASYYGYRDEEDGVLVKL 229
            GRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIY+RIDASYYGYRDEEDG+L KL
Sbjct: 121 GGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDEEDGILEKL 180

Query: 230 EAPAEVVMREMAVEEWNLMEEIKREAKKAVKSGEVANV---TDILFEEEEEVVEEERREK 289
           E PAE  M+  AV+EW  MEEIKREA KAVKSGEV  V   + ILFEEEE+V+EEERR+K
Sbjct: 181 EGPAEKKMQAAAVKEWMEMEEIKREAMKAVKSGEVVEVGLGSKILFEEEEDVIEEERRQK 240

Query: 290 ERLDENDAMQKEFVVHVPLPDEREIERMVVEKKKLELLSKYTSENFLEEQTEAKAMLNIN 348
           ER +E    +KEFVVHVPLPDE+EIERMVVE+KK+ELLSKY SEN +EEQ EAKAMLNI 
Sbjct: 241 EREEEK---EKEFVVHVPLPDEKEIERMVVEQKKMELLSKYASENLMEEQMEAKAMLNIQ 298
[Close]
BLAST of Spo09389.1 vs. NCBI nr
Match: gi|698478823|ref|XP_009786540.1| (PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Nicotiana sylvestris])

HSP 1 Score: 487.6 bits (1254), Expect = 1.700e-134
Identity = 255/301 (84.72%), Postives = 274/301 (91.03%), Query Frame = 1 

		  

Query: 50  MARNEEKAQSMLNRFITMKQDEKKKPKERRPFLASECRDLAEADKWRQQIMREIGRKVAE 109
           MARNEEKAQSMLNRFITMK++EKKKPKERRP+LASECRDLAEADKWRQQIMREIGRKVAE
Sbjct: 1   MARNEEKAQSMLNRFITMKEEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAE 60

Query: 110 IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIDLGGPNYTKQSAKMTDLEGNIVDVPNP 169
           IQNEGLGEHRLRDLNDEINKLIREK HWERRII+LGGPNYTK SAKMTDLEGNIVDVPNP
Sbjct: 61  IQNEGLGEHRLRDLNDEINKLIREKGHWERRIIELGGPNYTKHSAKMTDLEGNIVDVPNP 120

Query: 170 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYRRIDASYYGYRDEEDGVLVKL 229
            GRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIY+RIDASYYGYRDEEDG+L KL
Sbjct: 121 GGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDEEDGILEKL 180

Query: 230 EAPAEVVMREMAVEEWNLMEEIKREAKKAVKSGEVANV---TDILFEEEEEVVEEERREK 289
           E PAE  M+  AV+EW  MEEIKREA KAVKSGEV  V   + ILFEEEE+V+EEERR+K
Sbjct: 181 EGPAEKKMQAAAVKEWMEMEEIKREAMKAVKSGEVVEVGLGSKILFEEEEDVIEEERRQK 240

Query: 290 ERLDENDAMQKEFVVHVPLPDEREIERMVVEKKKLELLSKYTSENFLEEQTEAKAMLNIN 348
           ER +E    +KEFVVHVPLPDE+EIERMVVE+KK+ELLSKY SE+ +EEQ EAKAMLNI 
Sbjct: 241 EREEEK---EKEFVVHVPLPDEKEIERMVVEQKKMELLSKYASEDLMEEQMEAKAMLNIQ 298
[Close]
BLAST of Spo09389.1 vs. NCBI nr
Match: gi|460388773|ref|XP_004240039.1| (PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Solanum lycopersicum])

HSP 1 Score: 485.0 bits (1247), Expect = 1.100e-133
Identity = 253/301 (84.05%), Postives = 272/301 (90.37%), Query Frame = 1 

		  

Query: 50  MARNEEKAQSMLNRFITMKQDEKKKPKERRPFLASECRDLAEADKWRQQIMREIGRKVAE 109
           MARNEEKAQSMLNRFITMK++EKKKPKERRP+LASECRDLAEADKWRQQIMREIGRKV E
Sbjct: 1   MARNEEKAQSMLNRFITMKEEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVTE 60

Query: 110 IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIDLGGPNYTKQSAKMTDLEGNIVDVPNP 169
           IQNEGLGEHRLRDLNDEINKLIREK HWERRII+LGGPNYTK SAKMTDL+GNI+DVPNP
Sbjct: 61  IQNEGLGEHRLRDLNDEINKLIREKVHWERRIIELGGPNYTKHSAKMTDLDGNIIDVPNP 120

Query: 170 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYRRIDASYYGYRDEEDGVLVKL 229
            GRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIY+RIDASYYGYRDEEDG+LVKL
Sbjct: 121 GGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDEEDGILVKL 180

Query: 230 EAPAEVVMREMAVEEWNLMEEIKREAKKAVKSGEVANV---TDILFEEEEEVVEEERREK 289
           E PAE  MR  AV+EW  MEEIKREAKKAVKSGEV  V   + ILFEEEE+V+EEER E+
Sbjct: 181 EGPAEKKMRAAAVKEWMEMEEIKREAKKAVKSGEVVEVGLGSKILFEEEEDVIEEERMER 240

Query: 290 ERLDENDAMQKEFVVHVPLPDEREIERMVVEKKKLELLSKYTSENFLEEQTEAKAMLNIN 348
           ER  E    +KE+VVHVPLPDE+EIERMVVE KK+ELLSKY SE+ +EEQ EAKAMLNI 
Sbjct: 241 ER--EEKDREKEYVVHVPLPDEKEIERMVVEHKKMELLSKYASEDLMEEQMEAKAMLNIQ 299
[Close]
BLAST of Spo09389.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QGP1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_186390 PE=4 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 1.300e-160
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 1 

		  

Query: 50  MARNEEKAQSMLNRFITMKQDEKKKPKERRPFLASECRDLAEADKWRQQIMREIGRKVAE 109
           MARNEEKAQSMLNRFITMKQDEKKKPKERRPFLASECRDLAEADKWRQQIMREIGRKVAE
Sbjct: 1   MARNEEKAQSMLNRFITMKQDEKKKPKERRPFLASECRDLAEADKWRQQIMREIGRKVAE 60

Query: 110 IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIDLGGPNYTKQSAKMTDLEGNIVDVPNP 169
           IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIDLGGPNYTKQSAKMTDLEGNIVDVPNP
Sbjct: 61  IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIDLGGPNYTKQSAKMTDLEGNIVDVPNP 120

Query: 170 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYRRIDASYYGYRDEEDGVLVKL 229
           SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYRRIDASYYGYRDEEDGVLVKL
Sbjct: 121 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYRRIDASYYGYRDEEDGVLVKL 180

Query: 230 EAPAEVVMREMAVEEWNLMEEIKREAKKAVKSGEVANVTDILFEEEEEVVEEERREKERL 289
           EAPAEVVMREMAVEEWNLMEEIKREAKKAVKSGEVANVTDILFEEEEEVVEEERREKERL
Sbjct: 181 EAPAEVVMREMAVEEWNLMEEIKREAKKAVKSGEVANVTDILFEEEEEVVEEERREKERL 240

Query: 290 DENDAMQKEFVVHVPLPDEREIERMVVEKKKLELLSKYTSENFLEEQTEAKAMLNINR 348
           DENDAMQKEFVVHVPLPDEREIERMVVEKKKLELLSKYTSENFLEEQTEAKAMLNINR
Sbjct: 241 DENDAMQKEFVVHVPLPDEREIERMVVEKKKLELLSKYTSENFLEEQTEAKAMLNINR 298
[Close]
BLAST of Spo09389.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BX52_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g182300 PE=4 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 1.100e-146
Identity = 270/298 (90.60%), Postives = 284/298 (95.30%), Query Frame = 1 

		  

Query: 50  MARNEEKAQSMLNRFITMKQDEKKKPKERRPFLASECRDLAEADKWRQQIMREIGRKVAE 109
           MARNEEKAQSMLNRFITMKQDEKKKPKERRP+LASECRDLAEADKWRQQIMREIGRKVAE
Sbjct: 1   MARNEEKAQSMLNRFITMKQDEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAE 60

Query: 110 IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIDLGGPNYTKQSAKMTDLEGNIVDVPNP 169
           IQNEGLGEHRLRDLNDEINKLIREKSHWERRI+DLGGPNYTK SAKMTDLEGNIVDVPNP
Sbjct: 61  IQNEGLGEHRLRDLNDEINKLIREKSHWERRIMDLGGPNYTKHSAKMTDLEGNIVDVPNP 120

Query: 170 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYRRIDASYYGYRDEEDGVLVKL 229
           SGRGPGYRYFGAAKKLPGV+ELFEKPPELRKRRTRYDIY+RIDASYYGYRD+EDGVL KL
Sbjct: 121 SGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLEKL 180

Query: 230 EAPAEVVMREMAVEEWNLMEEIKREAKKAVKSGEVANVTDILFEEEEEVVEEERREKERL 289
           E PAE  MREMAVEEWNLMEEIKREAK+AVKSGEV NV +ILFEEEEEVVEEERREKERL
Sbjct: 181 EGPAEAAMREMAVEEWNLMEEIKREAKRAVKSGEVVNVKEILFEEEEEVVEEERREKERL 240

Query: 290 DENDAMQKEFVVHVPLPDEREIERMVVEKKKLELLSKYTSENFLEEQTEAKAMLNINR 348
            E+     EFVVHVPLPD++EIERMVVEKKK+ELLSKYTS++ LEEQTEAKAMLNI+R
Sbjct: 241 QEDQLRNNEFVVHVPLPDDKEIERMVVEKKKMELLSKYTSDDLLEEQTEAKAMLNIHR 298
[Close]
BLAST of Spo09389.1 vs. UniProtKB/TrEMBL
Match: M1A9U9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400006987 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 7.900e-134
Identity = 254/301 (84.39%), Postives = 272/301 (90.37%), Query Frame = 1 

		  

Query: 50  MARNEEKAQSMLNRFITMKQDEKKKPKERRPFLASECRDLAEADKWRQQIMREIGRKVAE 109
           MARNEEKAQSMLNRFITMK++EKKKPKERRP+LASECRDLAEADKWRQQIMREIGRKV E
Sbjct: 1   MARNEEKAQSMLNRFITMKEEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVTE 60

Query: 110 IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIDLGGPNYTKQSAKMTDLEGNIVDVPNP 169
           IQNEGLGEHRLRDLNDEINKLIREK HWERRII+LGGPNYTK SAKMTDL+GNIVDVPNP
Sbjct: 61  IQNEGLGEHRLRDLNDEINKLIREKVHWERRIIELGGPNYTKYSAKMTDLDGNIVDVPNP 120

Query: 170 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYRRIDASYYGYRDEEDGVLVKL 229
            GRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIY+RIDASYYGYRDEEDG+LVKL
Sbjct: 121 GGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDEEDGILVKL 180

Query: 230 EAPAEVVMREMAVEEWNLMEEIKREAKKAVKSGEVANV---TDILFEEEEEVVEEERREK 289
           E PAE  MR  AV+EW  MEEIKREAKKAVKSGEV  V   + ILFEEEE+V+EEER E+
Sbjct: 181 EGPAEKKMRAAAVKEWMEMEEIKREAKKAVKSGEVVEVGLGSKILFEEEEDVIEEERMER 240

Query: 290 ERLDENDAMQKEFVVHVPLPDEREIERMVVEKKKLELLSKYTSENFLEEQTEAKAMLNIN 348
           ER  E    +KE+VVHVPLPDE+EIERMVVE KK+ELLSKY SE+ +EEQ EAKAMLNI 
Sbjct: 241 ER--EEKDREKEYVVHVPLPDEKEIERMVVEHKKMELLSKYASEDLMEEQMEAKAMLNIQ 299
[Close]
BLAST of Spo09389.1 vs. UniProtKB/TrEMBL
Match: K4C1D9_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 2.300e-133
Identity = 252/299 (84.28%), Postives = 271/299 (90.64%), Query Frame = 1 

		  

Query: 50  MARNEEKAQSMLNRFITMKQDEKKKPKERRPFLASECRDLAEADKWRQQIMREIGRKVAE 109
           MARNEEKAQSMLNRFITMK++EKKKPKERRP+LASECRDLAEADKWRQQIMREIGRKV E
Sbjct: 1   MARNEEKAQSMLNRFITMKEEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVTE 60

Query: 110 IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIDLGGPNYTKQSAKMTDLEGNIVDVPNP 169
           IQNEGLGEHRLRDLNDEINKLIREK HWERRII+LGGPNYTK SAKMTDL+GNI+DVPNP
Sbjct: 61  IQNEGLGEHRLRDLNDEINKLIREKVHWERRIIELGGPNYTKHSAKMTDLDGNIIDVPNP 120

Query: 170 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYRRIDASYYGYRDEEDGVLVKL 229
            GRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIY+RIDASYYGYRDEEDG+LVKL
Sbjct: 121 GGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDEEDGILVKL 180

Query: 230 EAPAEVVMREMAVEEWNLMEEIKREAKKAVKSGEVANV---TDILFEEEEEVVEEERREK 289
           E PAE  MR  AV+EW  MEEIKREAKKAVKSGEV  V   + ILFEEEE+V+EEER E+
Sbjct: 181 EGPAEKKMRAAAVKEWMEMEEIKREAKKAVKSGEVVEVGLGSKILFEEEEDVIEEERMER 240

Query: 290 ERLDENDAMQKEFVVHVPLPDEREIERMVVEKKKLELLSKYTSENFLEEQTEAKAMLNI 346
           ER  E    +KE+VVHVPLPDE+EIERMVVE KK+ELLSKY SE+ +EEQ EAKAMLNI
Sbjct: 241 ER--EEKDREKEYVVHVPLPDEKEIERMVVEHKKMELLSKYASEDLMEEQMEAKAMLNI 297
[Close]
BLAST of Spo09389.1 vs. UniProtKB/TrEMBL
Match: A5AII6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0044g00540 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 1.100e-132
Identity = 254/303 (83.83%), Postives = 274/303 (90.43%), Query Frame = 1 

		  

Query: 50  MARNEEKAQSMLNRFITMKQDEKKKPKERRPFLASECRDLAEADKWRQQIMREIGRKVAE 109
           MARNEEKAQSMLNRFIT+K +EKKKPKERRP+LASECRDLAEADKWRQQIMREIGRKVAE
Sbjct: 1   MARNEEKAQSMLNRFITLKNEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAE 60

Query: 110 IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIDLGGPNYTKQSAKMTDLEGNIVDVPNP 169
           IQNEGLGEHRLRDLNDEINKLIREKSHWERRII+LGGPNYTK SAKMTDLEGNIVDVPNP
Sbjct: 61  IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIELGGPNYTKHSAKMTDLEGNIVDVPNP 120

Query: 170 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYRRIDASYYGYRDEEDGVLVKL 229
           SGRGPGYRYFGAAKKLPGVRELFEKPPELRKR++RYDIY+RIDASYYGYRD+EDGVL K+
Sbjct: 121 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRKSRYDIYKRIDASYYGYRDDEDGVLEKV 180

Query: 230 EAPAEVVMREMAVEEWNLMEEIKREAKKAVKSGEVANV--TDILFEEEEEVVEEER---R 289
           E PAE  MR   + EW  +EEIKREA++AVKSGEVA+V    ILFEEEE+VVEEER   R
Sbjct: 181 EGPAEERMRAAKLAEWEALEEIKREARRAVKSGEVASVAPAGILFEEEEDVVEEERQAAR 240

Query: 290 EKERLDENDAMQKEFVVHVPLPDEREIERMVVEKKKLELLSKYTSENFLEEQTEAKAMLN 348
           EKE     +  ++EFVVHVPLPDE+EIERMVVEKKK+ELLSKYTSE  LEEQTEAKAMLN
Sbjct: 241 EKE-----NEKEREFVVHVPLPDEKEIERMVVEKKKMELLSKYTSEGLLEEQTEAKAMLN 298
[Close]
BLAST of Spo09389.1 vs. ExPASy Swiss-Prot
Match: ISY1_HUMAN (Pre-mRNA-splicing factor ISY1 homolog OS=Homo sapiens GN=ISY1 PE=1 SV=3)

HSP 1 Score: 249.6 bits (636), Expect = 5.000e-65
Identity = 150/294 (51.02%), Postives = 189/294 (64.29%), Query Frame = 1 

		  

Query: 50  MARNEEKAQSMLNRFITMKQDEKKKPKERRPFLASECRDLAEADKWRQQIMREIGRKVAE 109
           MARN EKA + L RF    Q E+ K KERRPFLASEC +L +A+KWR+QI+ EI +KVA+
Sbjct: 1   MARNAEKAMTALARF-RQAQLEEGKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQ 60

Query: 110 IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIDLGGPNYTKQSAKMTDLEGNIVDVPNP 169
           IQN GLGE R+RDLNDEINKL+REK HWE RI +LGGP+Y K   KM D EG  V    P
Sbjct: 61  IQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEV----P 120

Query: 170 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYRRIDASYYGYRDEEDGVLVKL 229
             R  GY+YFGAAK LPGVRELFEK P    R+TR ++ + ID  YYGY DE+DGV+V L
Sbjct: 121 GNR--GYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDEDDGVIVPL 180

Query: 230 EAPAEVVMREMAVEEWNLMEEIKREAKKAVKSGEVANVTDILFEEEEEVVEEERREKERL 289
           E   E  +R   VE+W    E +    +  +  E     +I    EEE  EE  +EK   
Sbjct: 181 EQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEEESDEEGSQEK--- 240

Query: 290 DENDAMQKEFVVHVPLPDEREIERMVVEKKKLELLSKYTSENFLEEQTEAKAML 344
              D  Q++F+ HVP+P ++EIE  +V +KK+ELL KY SE    +  EA+ +L
Sbjct: 241 -GGDDSQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEARRLL 283
[Close]
BLAST of Spo09389.1 vs. ExPASy Swiss-Prot
Match: ISY1_MOUSE (Pre-mRNA-splicing factor ISY1 homolog OS=Mus musculus GN=Isy1 PE=1 SV=2)

HSP 1 Score: 249.2 bits (635), Expect = 6.500e-65
Identity = 151/294 (51.36%), Postives = 189/294 (64.29%), Query Frame = 1 

		  

Query: 50  MARNEEKAQSMLNRFITMKQDEKKKPKERRPFLASECRDLAEADKWRQQIMREIGRKVAE 109
           MARN EKA + L RF    Q E+ K KERRPFLASEC +L +A+KWR+QI+ EI +KVA+
Sbjct: 1   MARNAEKAMTALARF-RQAQLEEGKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQ 60

Query: 110 IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIDLGGPNYTKQSAKMTDLEGNIVDVPNP 169
           IQN GLGE R+RDLNDEINKL+REK HWE RI +LGGP+Y K   KM D EG  V    P
Sbjct: 61  IQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEV----P 120

Query: 170 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYRRIDASYYGYRDEEDGVLVKL 229
             R  GY+YFGAAK LPGVRELFEK P    R+TR ++ + ID  YYGY DE+DGV+V L
Sbjct: 121 GNR--GYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDEDDGVIVPL 180

Query: 230 EAPAEVVMREMAVEEWNLMEEIKREAKKAVKSGEVANVTDILFEEEEEVVEEERREKERL 289
           E   E  +R   VE+W    E +    +  +  E     +I    EEE  EE  +EK   
Sbjct: 181 EQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEEESDEEGNQEKAGE 240

Query: 290 DENDAMQKEFVVHVPLPDEREIERMVVEKKKLELLSKYTSENFLEEQTEAKAML 344
           D     Q++F+ HVP+P ++EIE  +V +KK+ELL KY SE    +  EAK +L
Sbjct: 241 DG----QQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAKRLL 283
[Close]
BLAST of Spo09389.1 vs. ExPASy Swiss-Prot
Match: ISY1_RAT (Pre-mRNA-splicing factor ISY1 homolog OS=Rattus norvegicus GN=Isy1 PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.100e-64
Identity = 149/296 (50.34%), Postives = 192/296 (64.86%), Query Frame = 1 

		  

Query: 50  MARNEEKAQSMLNRFITMKQDEKKKPKERRPFLASECRDLAEADKWRQQIMREIGRKVAE 109
           MARN EKA + L RF    Q E+ K KERRPFLASEC +L +A+KWR+QI+ EI +KVA+
Sbjct: 1   MARNAEKAMTALARF-RQAQLEEGKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQ 60

Query: 110 IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIDLGGPNYTKQSAKMTDLEGNIVDVPNP 169
           IQN GLGE R+RDLNDEINKL+REK HWE RI +LGGP+Y K   KM D EG  V    P
Sbjct: 61  IQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEV----P 120

Query: 170 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYRRIDASYYGYRDEEDGVLVKL 229
             R  GY+YFGAAK LPGVRELFEK P    R+TR ++ + ID  YYGY DE+DGV+V L
Sbjct: 121 GNR--GYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDEDDGVIVPL 180

Query: 230 EAPAEVVMREMAVEEWNLMEE--IKREAKKAVKSGEVANVTDILFEEEEEVVEEERREKE 289
           E   E  +R   VE+W    E  + R  K+  +  E  N+  +  EE +E   +E+  ++
Sbjct: 181 EQEYEKRLRAELVEKWKAEREARLARGEKEEEEEEEEINIYAVTEEESDEEGSQEKAGED 240

Query: 290 RLDENDAMQKEFVVHVPLPDEREIERMVVEKKKLELLSKYTSENFLEEQTEAKAML 344
                   Q++F+ HVP+P ++EIE  +V +KK+ELL KY SE    +  EAK +L
Sbjct: 241 G-------QQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAKRLL 282
[Close]
BLAST of Spo09389.1 vs. ExPASy Swiss-Prot
Match: ISY1_DICDI (Pre-mRNA-splicing factor ISY1 homolog OS=Dictyostelium discoideum GN=isy1 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 3.400e-53
Identity = 130/304 (42.76%), Postives = 183/304 (60.20%), Query Frame = 1 

		  

Query: 50  MARNEEKAQSMLNRFITMKQDEKKKPKERRPFLASECRDLAEADKWRQQIMREIGRKVAE 109
           MARNEEKA+SMLNR++ +K  E K+ +ERRP+L++EC  L +A+KWR+QI++EI R + E
Sbjct: 1   MARNEEKAKSMLNRYLQLKGTESKQ-EERRPYLSNECDSLVDAEKWRRQILKEITRGITE 60

Query: 110 IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIDLGGPNYTKQSAKMTDLEGNIVDVPNP 169
           IQN  L E+++RDLND INKL+REK HWERRI+ LGGPN+   + K+ D +G       P
Sbjct: 61  IQNSALDEYKIRDLNDHINKLVREKGHWERRILQLGGPNHRALAPKLFDADGK-----EP 120

Query: 170 SGRGPGYRYFGAAKKLPGVRELFEKPPEL---RKRRTRYDIYRRIDASYYGYRDEEDGVL 229
            G G  YRY+G AK LPGV ELFEKP +     +++TR D+Y+ ID+ YYGYRD+EDG L
Sbjct: 121 LGTGT-YRYYGEAKNLPGVAELFEKPEQTLHGTEKKTRQDLYKYIDSDYYGYRDDEDGKL 180

Query: 230 VKLEAPAEVVMREMAVEEWNLMEEIK------REAKKAVKSG-----EVANVTDILFEEE 289
            ++E   E    E  VE W   +  K      R     +K+         N  +I  +++
Sbjct: 181 EEIEREYEKYAIEQNVENWKKQQRDKFQINTNRFNNNNIKNSIAINKNTENKDEINIDDD 240

Query: 290 EEVVEEERREKERLDEN----DAMQKE-------FVVHVPLPDEREIERMVVEKKKLELL 329
           EE  +          EN    + +Q+E       F  +V LP   +IE +++EK+K EL 
Sbjct: 241 EENDDNNNNNNNNNTENTENIENIQEEEEKEDIKFKSYVSLPSTSQIETILLEKRKEELR 297
[Close]
BLAST of Spo09389.1 vs. ExPASy Swiss-Prot
Match: ISY1_USTMA (Pre-mRNA-splicing factor ISY1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=ISY1 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.100e-39
Identity = 98/210 (46.67%), Postives = 132/210 (62.86%), Query Frame = 1 

		  

Query: 50  MARNEEKAQSMLNRFITMKQDE---KKKPKERRPFLASECRDLAEADKWRQQIMREIGRK 109
           MARN+EKAQSML RF   +        KP  RRP LAS    L E ++WR  ++REI RK
Sbjct: 1   MARNQEKAQSMLYRFREAQATSLGVSTKPA-RRPRLASSVSSLKECERWRSDVIREISRK 60

Query: 110 VAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIIDLGGPNYTKQSAKMTDLEGNIVDV 169
           V++IQ+ GL ++ +RDLNDEINKL+REK HWE +I+ LGG NY +    M   +  +V  
Sbjct: 61  VSKIQDFGLNDYEVRDLNDEINKLLREKGHWENQIVALGGANYKRGVPSMLGDDKGVV-- 120

Query: 170 PNPSGRGPGYRYFGAAKKLPGVRELF--EKPPELRKRRTRYDIYRRIDASYYGYRDEEDG 229
               GRG GY+YFG AK LPGV+ELF  +K  E  +   RY+ +R +  SYYG  DE+DG
Sbjct: 121 ----GRG-GYKYFGRAKDLPGVKELFTSQKADEAGRSEERYERFRNLPPSYYGDEDEDDG 180

Query: 230 VLVKLEAPAEVVMREMAVEEWNLMEEIKRE 255
           +L++ E  AE V  E     WN+++ +K +
Sbjct: 181 LLLEQERSAEEV--EWNERFWNVVQGLKHD 200
[Close]
BLAST of Spo09389.1 vs. TAIR (Arabidopsis)
Match: AT3G18790.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 446.4 bits (1147), Expect = 1.600e-125
Identity = 226/303 (74.59%), Postives = 266/303 (87.79%), Query Frame = 1 

		  

Query: 50  MARNEEKAQSMLNRFITMKQDEKKKPKERRPFLASECRDLAEADKWRQQIMREIGRKVAE 109
           MARNEEKAQSMLNRFIT K+ EKKKPKERRP+LASECRDLAEADKWRQQI+REIG KVAE
Sbjct: 1   MARNEEKAQSMLNRFITQKESEKKKPKERRPYLASECRDLAEADKWRQQILREIGSKVAE 60

Query: 110 IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIDLGGPNYTKQSAKMTDLEGNIVDVPNP 169
           IQNEGLGEHRLRDLNDEINKL+RE+ HWERRI++LGG NY+K SAKMTDLEGNI+DVPNP
Sbjct: 61  IQNEGLGEHRLRDLNDEINKLLRERYHWERRIVELGGHNYSKHSAKMTDLEGNIIDVPNP 120

Query: 170 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYRRIDASYYGYRDEEDGVLVKL 229
           SGRGPGYRYFGAAKKLPGVRELFEKPPELRKR+TRYDIY+RIDASYYGYRD+EDG+L KL
Sbjct: 121 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRKTRYDIYKRIDASYYGYRDDEDGILEKL 180

Query: 230 EAPAEVVMREMAVEEWNLMEEIKREAKKAVK-----SGEVANVTDILFEEEEEVVEEERR 289
           E  +E  MR+ +VEEW  ++E+++EA+K            A   ++LFEEEE+VVEEER 
Sbjct: 181 ERKSEGGMRKRSVEEWRRLDEVRKEARKGASEVVSVGAAAAAAREVLFEEEEDVVEEERM 240

Query: 290 EKERLDENDAMQKEFVVHVPLPDEREIERMVVEKKKLELLSKYTSENFLEEQTEAKAMLN 348
           E+E+ +E    ++EFVVHVPLPDE+EIE+MV+EKKK++LLSKY SE+ +E+QTEAK+MLN
Sbjct: 241 EREKEEEK---EREFVVHVPLPDEKEIEKMVLEKKKMDLLSKYASEDLVEQQTEAKSMLN 300
The following BLAST results are available for this feature:
BLAST of Spo09389.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902155035|gb|KNA05868.1|1.9e-160100.hypothetical protein SOVF_1863... [more]
gi|731350184|ref|XP_010686376.1|1.5e-14690.6PREDICTED: pre-mRNA-splicing f... [more]
gi|697188029|ref|XP_009603049.1|4.6e-13585.0PREDICTED: pre-mRNA-splicing f... [more]
gi|698478823|ref|XP_009786540.1|1.7e-13484.7PREDICTED: pre-mRNA-splicing f... [more]
gi|460388773|ref|XP_004240039.1|1.1e-13384.0PREDICTED: pre-mRNA-splicing f... [more]
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BLAST of Spo09389.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QGP1_SPIOL1.3e-160100.Uncharacterized protein OS=Spi... [more]
A0A0J8BX52_BETVU1.1e-14690.6Uncharacterized protein OS=Bet... [more]
M1A9U9_SOLTU7.9e-13484.3Uncharacterized protein OS=Sol... [more]
K4C1D9_SOLLC2.3e-13384.2Uncharacterized protein OS=Sol... [more]
A5AII6_VITVI1.1e-13283.8Putative uncharacterized prote... [more]
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BLAST of Spo09389.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ISY1_HUMAN5.0e-6551.0Pre-mRNA-splicing factor ISY1 ... [more]
ISY1_MOUSE6.5e-6551.3Pre-mRNA-splicing factor ISY1 ... [more]
ISY1_RAT1.1e-6450.3Pre-mRNA-splicing factor ISY1 ... [more]
ISY1_DICDI3.4e-5342.7Pre-mRNA-splicing factor ISY1 ... [more]
ISY1_USTMA2.1e-3946.6Pre-mRNA-splicing factor ISY1 ... [more]
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BLAST of Spo09389.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G18790.11.6e-12574.5FUNCTIONS IN: molecular_functi... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009360Isy1-like splicingPANTHERPTHR13021FAMILY NOT NAMEDcoord: 51..345
score: 9.9E
IPR009360Isy1-like splicingPFAMPF06246Isy1coord: 50..326
score: 9.4
NoneNo IPR availableunknownCoilCoilcoord: 272..292
score: -coord: 120..140
scor
NoneNo IPR availableunknownSSF140102ISY1 domain-likecoord: 76..151
score: 1.05

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006397 mRNA processing
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0008152 metabolic process
biological_process GO:0035556 intracellular signal transduction
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0043687 post-translational protein modification
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0030422 production of siRNA involved in RNA interference
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006897 endocytosis
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0009507 chloroplast
cellular_component GO:0005730 nucleolus
cellular_component GO:0005665 DNA-directed RNA polymerase II, core complex
cellular_component GO:0030132 clathrin coat of coated pit
cellular_component GO:0030130 clathrin coat of trans-Golgi network vesicle
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0005198 structural molecule activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0003677 DNA binding
RNA-Seq Expression