Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGAACTCTTTGAGCCAAAAAATGGAAGTGGCAATTTATGTTATTTTGGGCGAATTCTAAGGGCTTCATTGGCGGTGTCCATGCATATAAGCCCACCCTCTTCCCACTTATTCTCACCCCATTTTCATTTCTTCTTTCTCTTTCTTCAACATAACAACAACAACAACAACAACAACAACAACAACATAACTTTCTCATTCTTACTTACACATTCTCTCTCCCAGAGTGTTGAAAATAAGTGTCGAAATGAGGATGGTTAATCTGATTTTGCTGTCGGTGCTTCTACTTTCTTCCACGTGTCACTTTGTCTCTGCTTTCACTGATGGTAATTTCCCTCTTATCCTTAACTATTTTGAATCCTACCTCAATTTGTCTACAATTTTTCTAATTTCAATTCTTTAGTTTCCTTAAATTAAATTGGTTTACTAGGTCGATAGTGATATTACTGAGTGGGGTTGAATCGGTAGTTTACTAAACGAAGCTTAAATATTGTTGGTTTTCTTCAAAGATTATTTAAACATTTGCACACTTATGTTACTAATTGTAGTTTAGTACTTTAGCTACCTTAAATTGGTTTATTATATGTCGATAGCGTGACCGTGTTCTCTTGAACTGATATTTATCGGCTAATTGAATCGATTTTTACTAAACGAAAATAAAGTATACGAGTAACTAGGTTGTTCTCTTCAAATGATTATTACTAACGAAACAAATGCACACTTGTGTTAATGTGAGGAAATACTGAAGTACAAGACCTAGAACTGCATACATGTTTCAATTCAATGTTATATGCAACACTATCCCAAAATTGACGTAACAATTTTTCATGGCAAAACACCATTTGAAGTAAAAGTTCATACTCAATCTCTTTCTTAAACTGCGCGTTAACAGATTATTTTGCAACTACTTTAGACACAGAGGAACTATAAGTAAACTAGAAAACACCGATTGAAGTATGAATTGATTATTGAGAGCTTTGCACTTTCATGCTAGTTTGTTAGGTAGCCATTTATTTATTTCTTTAATAAAAGAGAATTTCTATTTTCTAATGGCCAAAGAATTTCTCACCAATCTTTTTTTTTTTTTTAACTAAATGTGAATTTCAAAAATTAAATTCTACCCGTACTACTATTTGCTTTTATGAGGGGAGTACCGAACTTACCGCATTTGTTCAAACACTTGAATGCTCCTGTAGCTTGTACTCTTGTAGCCTTGTAGGTCTTATAGAACGAGTATTTGAATTTCAACCGTTATTTCAAATTACTCTATCACGGGTGACTACTTCCTCGGTCTCTTAATACTCACACCGTTTTAACTTTTTACACTATTTACATAATTTACTATGATCCTATTTTATTTCTATTATATGAAAACAAATGCTAGAATATAATATATTGTTTGCTTCATCTTAATATATATTTTTAAAATATTAATAATTTTATAAATTTTTATAATATGTAGTTAAGTATACTGGTGATCAAAGTTGTTCATTGACAAGCGTGTTCAGTTAAAATATTACGATTACAGATTTACAGTAATTAATTTAAAAGAGAGGCAACAAATTTGTTTTCAATTATCAAGAATCACTTTTTCCTTGCACATAAAAGGGGTAATAGTTTAGTGGGGCTAAATTGATGTGGACTAATGTTAGTGTTGGTCATTTTAGCACGACATACAAGTAGCCATGTTTCAGATTTCACGTGGTGGCCCTAGTCTGGCTGCTCAGCCATTTCTAAGATTTACTCGGATAGTCGGATGTCTATCATGTTTGATACGGAGTACCAAGTATTAATACTGTTTCGTACCTCTGTTTCTCGGTTGACACATTGTTTTGATTTTTTGTATTTCGGCCGGTCCCATATACGGAGTATGTTTCTTCATTTATCGGTATTTAATTATTTATTACGGAGTAGTAAAAAGTTGTAATAGAACTTCTATTTTGAAAAACTGATCCAATAATATTTTACATAGTACAGTTTTCCGAATATTAAAAGAGTAGGGAATCTTCTTAAATATTTCAGTTTCTTTTAAAAGAAAGAGCGAGACTAATTTTATTACGGAGTCAAACATATTCATGGGACTGTATCTCTGATTCATGTAATTTCTTAGTCCTTAATGAACCTATCCTTTAACCAAGCTAAGACAAGAAAAAAAAAACAGGATATTTATACGTCATACATAAACCATAAACTGGAAAATTATGACAAAGACAAAAAATAAAAAATAATGTAGCAGAAGAATAATATATAGACCGACTTATGGTTGTCATTATCCAAAAACAGAACAAAACCTAAAGTATATCTTGATCTATATAATACATACAGCCAAAACTCTCAAATTATTAATAAAACACGGAGTATCTGCTTTTTTCTAATCACAAGAAATTATACGAGTACATTGTTGCAGTATGCATACTTATCCATTATAGCCCTCTCCCAATTTTAAAGTAGAATCGTGTAACAAGTCGATCAGGTTGCTAAGGTAGACTAGTTGATTTTGAAGTGACACTAAAAATTACGCATTGGAATATCGGACGATTACAATTGTTGTAACACCTTCATATCTGTGTTCACGTGACTAAATAAGTACTCCATTTGGAATTAGTAATCACATTGTTTGTGCATAACCACGACTTACTATAATTCTATAAATTTGCTGTAATGTCGTTCATAATACTCCGTAGTTGTTTATTTTTTCCCATAACCCAATTTGCAATATTGATTAAGTTATGTGATAATTATTTGTGAACATCTGGTGAATAGATCGAATAATGAGTATAACATAGTTAGCGTATTTTGAGTTCAGGATTACTACCTAACGGAGACTTTGAGCTGGGGCCAAAGCGATCGGACATGAAGGGCACAGAGGTGATAAACCGTCACGCAATACCAAAATGGGAAATATCCGGGTTCGTGGAGTACATAAAATCAGGTCAAAAACAAGGGGACATGTTACTAGTAGTCCCCGAGGGAGCCTTCGCAGTAAGACTAGGAAACGAGGCATCGATAAAGCAAAGGGTGAATGTAACAAAAGGGATGAACTATGCAATAACATTTTGTGCAGCAAGAACTTGTGCTCAAGAAGAACAACTCAACATATCAGTGTCACCTGAATGGGGTGTACTTCCCATGCAAACTTTGTATAGTAGTAGTGGTTGGGATTGTTATGCTTGGGGTTTTGTCGCACTTTCTAGTATTGCTGAACTTGTTATCCATAACCCTGGTGTTGAGGAAGATCCTGCTTGTGGACCTCTTATCGACTCCGTTGCTATGCGCGTTCTTGTTCCTCCTAAGAGGACTAGCAGTATGTTTTCTCCCTATACTCTTTATTTTCTTTATTTCTTTCTTATACAACCGTTGCATCATATGATTCATGTCATCGATACACTAATTAACCTAAATGCTGTTGCATTCCGAGTTTTGAGTCTGAATTAAGCCCTTGATTAAACTGAAACAACTCCCTTATTTGTTGATCCAAGTAATTGTCGACTCGTCGGTGTTAGATAAGCAGTCATGATTGTTGAAACAATGATAGTATTAAAACTAAAATCTATACTATATCTTGTTGGGGGAGAAGACATTAATAAGAGGGTTCAATTAGTGTAGACACCAGTGGATACACCAAATGAATTGGGCCTAGTATGAGTATCAAAACTAATTTGTGGGCATAAATTATAGAGGCCACCAAATTAATTAATAAGCTCTTTTTTCCTTTCTTGATGAAATTTAATGTTCCACATGGTGATTGAGACATATGTTGTAAGTTTGTAACATGTCATGACTTGAGTTTTTCATGAGCAATCAATGCATCACATGACCCTCCATTTAGCAATGTTGGTTGTTATAGTGTAAAATGTCACCATCAATTTTTTTTAAAAAAATTAGAAAGTTGGTTGATCTTTCTTCATCACATATTCGAATCCTTACTTTCGTCCTTCTTCATTTGTAATTTGTATTGCATTTATGGCTAGTCTTTTTGGCCTCTTTTTTAAGTGTTAAAAAAACAAGTGTCTAACTCTATGATGAATAACAAATGCAGTGAACTTATTGAAGAATGGTAACTTTGAAGAAGGTCCTTTCATCTTCCGCAACACAACATGGGGAACACTAATCCCACCAAACATAGAAGACGCTCATTCTCCACTACCGGGTTGGATGGTTGAATCCTTGAAGGCGGTCAAGTATCTCGATTCAAACCACTTCTCAGTTCCTTCTGGCAAACGTGCAGTGGAGCTTGTCGCAGGCAAAGAAAGTGCCATTGCTCAAGTTGTTCGTACCACCCCTGGTAGACGATACGCTTTAACGTTCGCTGTTGGTGACGCTAACGATGCGTGTGCCGGATCCATGGTTGTCGAGGCATTTGCAGGCAAAGACACACTCAAAGTCCCTTACGCGTCTAAGGGAAAAGGCGGGTTTAAGCGAGCTGTTCTTCGCTTTGTTGCTACTCAAACTAGAACTCGAATTATGTTTTATAGCACCTTTTATTCCATGAGGAGTGATGATTTCTCTTCGCTTTGCGGCCCCGTCATCGACGATGTTCGACTCCTCAGCATCCGTCGCCCATGAACATCGAATTAAGCCTTAACTAGTGATCGAGTGCGTGGAATTAAGGTTTTTTTTACTCTACTAAAAACATTAAGGATATTGTTAATTTGATTGGAAAAAAGGGTGGTGAAATTAGGTGCTTTGTTTTTCTTGAATGCGGAGGTAATTATATGAAAAATGCTAAGCAATGTATTTTTGTGTTGCGGAGAGGCAATTAGCTTGAGATTATCTTTAGCATATGCATCAAGTTTATATAGGTAAGGGTTTCGAAATAAGGAGATATCTAAGTATACTATTAATGTAAAATACTTGTATGGTTTTCTTATTAATGTGTTTATTTGGTTGTTGAGTTGCCACTTTTAAATTAATGAAAAACATAAGTACTTCTTGGCTTGAAATTAATTTCTCACACTTGTAGTCATTTTTTAATTACGTTTTCTTTTAAAAAAACATTATTCATGTGATCATGTCC GTGAACTCTTTGAGCCAAAAAATGGAAGTGGCAATTTATGTTATTTTGGGCGAATTCTAAGGGCTTCATTGGCGGTGTCCATGCATATAAGCCCACCCTCTTCCCACTTATTCTCACCCCATTTTCATTTCTTCTTTCTCTTTCTTCAACATAACAACAACAACAACAACAACAACAACAACAACATAACTTTCTCATTCTTACTTACACATTCTCTCTCCCAGAGTGTTGAAAATAAGTGTCGAAATGAGGATGGTTAATCTGATTTTGCTGTCGGTGCTTCTACTTTCTTCCACGTGTCACTTTGTCTCTGCTTTCACTGATGGATTACTACCTAACGGAGACTTTGAGCTGGGGCCAAAGCGATCGGACATGAAGGGCACAGAGGTGATAAACCGTCACGCAATACCAAAATGGGAAATATCCGGGTTCGTGGAGTACATAAAATCAGGTCAAAAACAAGGGGACATGTTACTAGTAGTCCCCGAGGGAGCCTTCGCAGTAAGACTAGGAAACGAGGCATCGATAAAGCAAAGGGTGAATGTAACAAAAGGGATGAACTATGCAATAACATTTTGTGCAGCAAGAACTTGTGCTCAAGAAGAACAACTCAACATATCAGTGTCACCTGAATGGGGTGTACTTCCCATGCAAACTTTGTATAGTAGTAGTGGTTGGGATTGTTATGCTTGGGGTTTTGTCGCACTTTCTAGTATTGCTGAACTTGTTATCCATAACCCTGGTGTTGAGGAAGATCCTGCTTGTGGACCTCTTATCGACTCCGTTGCTATGCGCGTTCTTGTTCCTCCTAAGAGGACTAGCATGAACTTATTGAAGAATGGTAACTTTGAAGAAGGTCCTTTCATCTTCCGCAACACAACATGGGGAACACTAATCCCACCAAACATAGAAGACGCTCATTCTCCACTACCGGGTTGGATGGTTGAATCCTTGAAGGCGGTCAAGTATCTCGATTCAAACCACTTCTCAGTTCCTTCTGGCAAACGTGCAGTGGAGCTTGTCGCAGGCAAAGAAAGTGCCATTGCTCAAGTTGTTCGTACCACCCCTGGTAGACGATACGCTTTAACGTTCGCTGTTGGTGACGCTAACGATGCGTGTGCCGGATCCATGGTTGTCGAGGCATTTGCAGGCAAAGACACACTCAAAGTCCCTTACGCGTCTAAGGGAAAAGGCGGGTTTAAGCGAGCTGTTCTTCGCTTTGTTGCTACTCAAACTAGAACTCGAATTATGTTTTATAGCACCTTTTATTCCATGAGGAGTGATGATTTCTCTTCGCTTTGCGGCCCCGTCATCGACGATGTTCGACTCCTCAGCATCCGTCGCCCATGAACATCGAATTAAGCCTTAACTAGTGATCGAGTGCGTGGAATTAAGGTTTTTTTTACTCTACTAAAAACATTAAGGATATTGTTAATTTGATTGGAAAAAAGGGTGGTGAAATTAGGTGCTTTGTTTTTCTTGAATGCGGAGGTAATTATATGAAAAATGCTAAGCAATGTATTTTTGTGTTGCGGAGAGGCAATTAGCTTGAGATTATCTTTAGCATATGCATCAAGTTTATATAGGTAAGGGTTTCGAAATAAGGAGATATCTAAGTATACTATTAATGTAAAATACTTGTATGGTTTTCTTATTAATGTGTTTATTTGGTTGTTGAGTTGCCACTTTTAAATTAATGAAAAACATAAGTACTTCTTGGCTTGAAATTAATTTCTCACACTTGTAGTCATTTTTTAATTACGTTTTCTTTTAAAAAAACATTATTCATGTGATCATGTCC ATGAGGATGGTTAATCTGATTTTGCTGTCGGTGCTTCTACTTTCTTCCACGTGTCACTTTGTCTCTGCTTTCACTGATGGATTACTACCTAACGGAGACTTTGAGCTGGGGCCAAAGCGATCGGACATGAAGGGCACAGAGGTGATAAACCGTCACGCAATACCAAAATGGGAAATATCCGGGTTCGTGGAGTACATAAAATCAGGTCAAAAACAAGGGGACATGTTACTAGTAGTCCCCGAGGGAGCCTTCGCAGTAAGACTAGGAAACGAGGCATCGATAAAGCAAAGGGTGAATGTAACAAAAGGGATGAACTATGCAATAACATTTTGTGCAGCAAGAACTTGTGCTCAAGAAGAACAACTCAACATATCAGTGTCACCTGAATGGGGTGTACTTCCCATGCAAACTTTGTATAGTAGTAGTGGTTGGGATTGTTATGCTTGGGGTTTTGTCGCACTTTCTAGTATTGCTGAACTTGTTATCCATAACCCTGGTGTTGAGGAAGATCCTGCTTGTGGACCTCTTATCGACTCCGTTGCTATGCGCGTTCTTGTTCCTCCTAAGAGGACTAGCATGAACTTATTGAAGAATGGTAACTTTGAAGAAGGTCCTTTCATCTTCCGCAACACAACATGGGGAACACTAATCCCACCAAACATAGAAGACGCTCATTCTCCACTACCGGGTTGGATGGTTGAATCCTTGAAGGCGGTCAAGTATCTCGATTCAAACCACTTCTCAGTTCCTTCTGGCAAACGTGCAGTGGAGCTTGTCGCAGGCAAAGAAAGTGCCATTGCTCAAGTTGTTCGTACCACCCCTGGTAGACGATACGCTTTAACGTTCGCTGTTGGTGACGCTAACGATGCGTGTGCCGGATCCATGGTTGTCGAGGCATTTGCAGGCAAAGACACACTCAAAGTCCCTTACGCGTCTAAGGGAAAAGGCGGGTTTAAGCGAGCTGTTCTTCGCTTTGTTGCTACTCAAACTAGAACTCGAATTATGTTTTATAGCACCTTTTATTCCATGAGGAGTGATGATTTCTCTTCGCTTTGCGGCCCCGTCATCGACGATGTTCGACTCCTCAGCATCCGTCGCCCATGA MRMVNLILLSVLLLSSTCHFVSAFTDGLLPNGDFELGPKRSDMKGTEVINRHAIPKWEISGFVEYIKSGQKQGDMLLVVPEGAFAVRLGNEASIKQRVNVTKGMNYAITFCAARTCAQEEQLNISVSPEWGVLPMQTLYSSSGWDCYAWGFVALSSIAELVIHNPGVEEDPACGPLIDSVAMRVLVPPKRTSMNLLKNGNFEEGPFIFRNTTWGTLIPPNIEDAHSPLPGWMVESLKAVKYLDSNHFSVPSGKRAVELVAGKESAIAQVVRTTPGRRYALTFAVGDANDACAGSMVVEAFAGKDTLKVPYASKGKGGFKRAVLRFVATQTRTRIMFYSTFYSMRSDDFSSLCGPVIDDVRLLSIRRP Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo09148.1 vs. NCBI nr
Match: gi|902131771|gb|KNA04294.1| (hypothetical protein SOVF_201000 [Spinacia oleracea]) HSP 1 Score: 744.6 bits (1921), Expect = 8.400e-212 Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 1
BLAST of Spo09148.1 vs. NCBI nr
Match: gi|731320229|ref|XP_010670694.1| (PREDICTED: uncharacterized protein LOC104887687 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 690.3 bits (1780), Expect = 1.900e-195 Identity = 330/367 (89.92%), Postives = 353/367 (96.19%), Query Frame = 1
BLAST of Spo09148.1 vs. NCBI nr
Match: gi|983677440|gb|AMB38759.1| (DUF642 [Vitis quinquangularis]) HSP 1 Score: 597.4 bits (1539), Expect = 1.700e-167 Identity = 287/367 (78.20%), Postives = 322/367 (87.74%), Query Frame = 1
BLAST of Spo09148.1 vs. NCBI nr
Match: gi|566213642|ref|XP_002324280.2| (hypothetical protein POPTR_0018s01390g [Populus trichocarpa]) HSP 1 Score: 596.7 bits (1537), Expect = 2.800e-167 Identity = 282/359 (78.55%), Postives = 319/359 (88.86%), Query Frame = 1
BLAST of Spo09148.1 vs. NCBI nr
Match: gi|225430200|ref|XP_002284962.1| (PREDICTED: uncharacterized protein LOC100252479 [Vitis vinifera]) HSP 1 Score: 595.1 bits (1533), Expect = 8.200e-167 Identity = 286/367 (77.93%), Postives = 321/367 (87.47%), Query Frame = 1
BLAST of Spo09148.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QAK5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_201000 PE=4 SV=1) HSP 1 Score: 744.6 bits (1921), Expect = 5.800e-212 Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 1
BLAST of Spo09148.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FLQ1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g043130 PE=4 SV=1) HSP 1 Score: 690.3 bits (1780), Expect = 1.300e-195 Identity = 330/367 (89.92%), Postives = 353/367 (96.19%), Query Frame = 1
BLAST of Spo09148.1 vs. UniProtKB/TrEMBL
Match: A0A161DY72_9ROSI (DUF642 OS=Vitis quinquangularis PE=2 SV=1) HSP 1 Score: 597.4 bits (1539), Expect = 1.200e-167 Identity = 287/367 (78.20%), Postives = 322/367 (87.74%), Query Frame = 1
BLAST of Spo09148.1 vs. UniProtKB/TrEMBL
Match: B9IKU1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s01390g PE=4 SV=2) HSP 1 Score: 596.7 bits (1537), Expect = 2.000e-167 Identity = 282/359 (78.55%), Postives = 319/359 (88.86%), Query Frame = 1
BLAST of Spo09148.1 vs. UniProtKB/TrEMBL
Match: A0A168P607_9ROSI (DUF642 OS=Vitis quinquangularis PE=2 SV=1) HSP 1 Score: 595.1 bits (1533), Expect = 5.700e-167 Identity = 286/367 (77.93%), Postives = 321/367 (87.47%), Query Frame = 1
BLAST of Spo09148.1 vs. TAIR (Arabidopsis)
Match: AT5G11420.1 (Protein of unknown function, DUF642) HSP 1 Score: 567.0 bits (1460), Expect = 8.400e-162 Identity = 274/367 (74.66%), Postives = 315/367 (85.83%), Query Frame = 1
BLAST of Spo09148.1 vs. TAIR (Arabidopsis)
Match: AT5G25460.1 (Protein of unknown function, DUF642) HSP 1 Score: 556.2 bits (1432), Expect = 1.500e-158 Identity = 269/365 (73.70%), Postives = 309/365 (84.66%), Query Frame = 1
BLAST of Spo09148.1 vs. TAIR (Arabidopsis)
Match: AT4G32460.1 (Protein of unknown function, DUF642) HSP 1 Score: 555.8 bits (1431), Expect = 1.900e-158 Identity = 264/365 (72.33%), Postives = 311/365 (85.21%), Query Frame = 1
BLAST of Spo09148.1 vs. TAIR (Arabidopsis)
Match: AT1G80240.1 (Protein of unknown function, DUF642) HSP 1 Score: 469.2 bits (1206), Expect = 2.400e-132 Identity = 225/358 (62.85%), Postives = 275/358 (76.82%), Query Frame = 1
BLAST of Spo09148.1 vs. TAIR (Arabidopsis)
Match: AT3G08030.1 (Protein of unknown function, DUF642) HSP 1 Score: 399.4 bits (1025), Expect = 2.300e-111 Identity = 197/359 (54.87%), Postives = 255/359 (71.03%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo09148.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo09148.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo09148.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo09148.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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