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Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATTTAAGCTATCCCGATGGCCACAAAAGCACTCAACGGCTAGGCGCCGCTCATCAAAATTTAAATTTTCACTTTCCTCTTCTTCGTCACTCACTTCCCCCCCTCCCCCCTCCACAAGCTCTGCAATTTCACAAAAATGGCGAGCACAAATCACAACGATCTCTTCACATCTCTAATCTCCGAAATCAAATCTTACTCCGGCAACGACCCTCTTTTTCCATGGCTCAGGTAATTCCCTCTCTCTCTTTCTCTCTCCTCTCTCTTTTCTTTCTCCATAATGTTCACTAACTCTGTCACACTTTCGTGAAATCAATTGCAGCGGAGTTCGAAAAATGAAAGAAACTTTACCACACCACCTCCTCAAAGAGAAGCTCCCTCGATTCCTTCAGAAATGCGCCAAGACTTTCGATTCCGATCGCCGCTACCGCAATGACCTCCGATACCTCCGCATTTGGTTGCAATTGGTGATTATTTTTCTATCTTTCTTGATTTTTTTGATTTCATGAATTTGTGAATTTTTGTTTTTATTGATTTAGGGTTTGAATTGTGGGGTGTAGATGGATTATGTAGATGATCCGAAAGCGTTGTTGCGGACTATGGAGACGAAGAAGATTGGGAAGAAGCGGTGTCTATTTTATCAGGCGTATGCGCTTTATTATGAGAAGATTAAAAAATTTGATGATGCTGAAAAAATGTATCTTTTGGGGGTTCAAAAGTAAGTTGCAGTGAATTTCTTTGTCCAATTTCAAGACTTCAATTGCAATTATTTAAGGGGAAAAGTATTGTATATAGAGATTGTAGCTGTGTAATGTTAGCTTGTGGTTTACTTCAACAATTTGGGTTTTCTTTGCTGTTGAAAATGTGGTTTTGGTTGAAACCCTAGAGGGTATTTGTTGCTAATTTGTGGTTATTAATAGTTAATGCCTTAGTGGGGTGGAAAAATTGGAGATTTTATTGTTGGCTTTTTACTCATGGAAGAAGAAATATGGTTAGTTTCCTGAACTGTTCCGATTTCGAGCTTATTTGTTTTCAGAATAACAGATCCTAAGAACTTATTGGACACATTTAGGTTGGAGTTTGGATATGAATGAGAGGAAAATCAGCACTTTTTTGAGTTTTTTTGGGCTACTGATTATGTTTGAGCTTATTGGAGTAATTTAGTACCCTTTCATAGAACTTATTGGACTTGTTAGATCTGAAACTAAAAAGTTGACTTGTCCACCTCGAGTTAAACTTTTCTGAACTTGGTTTCCCAAACTGAATGTGTCAGAATGTATGAGCCCTAAGCTGAACTTATCTGAAGCAAATCCTTTGTTTTGAGAAAAGAACAAACTAGGCTTCTAAAATTTGAAGTTATGGGAAGATTTGTTCCGACCCCTTTAGTATCTTATATCATTCTGCTAATCAAAATGTGTAGGAAACCATTTTACGCCCAATCTAATGGAACTATATAGAAAGGAATACTGTCTTCTGTCTCAAAGTAAAAGTCTTGTGTTTGATTTAGAGATGTTTGATCATATTTGCAATTAGCTTATTCATTATATACTTGATAGTCGGATGGTTCTTTCAAAGAAATCTGTGCCTATTTGAAACAAAATAATAAGACCGTCATGGTGAATTCTAGGTAACACACAAATTATTGTTCCGTTCAATTTACTACAACAGATAAGTGACATGTTTATTGACTGAATACGGTCTCCCATAGTCCCATGCCTTGGGATGGTTCTTTCAAAGAAATCTGTGCCTATTTGAAACAAAATAATAAGACCGTCATGGTGAATTCTAGGTAACACACAAATTATTGTTCCGTTCAATTTACTACAACAGATAAGTGACATGTTTATTGACTGAATACGGTCTCCCATAGTCCCATGCCTTGGGATATTTACACTTCACGTAATAGCTGATTTTGAATCTCAATACGAGACTGAAGAAATCAACTGAGATAAAAGAGTATTTGCTAATAATTTCTCAGTCACTGGTTTCGATATCTGTGGAGCTTATAATCTAAGATTCTTCAGTATCCATGTATTCTCAGCTTATTGGTGTGCTTGTATATTCTGGGTATTGTTAGAGGGTTATGTATGAAATTACATGGTCTATGTTAGGCATAAAACATGGGATCATTTGTTCATATGATGTTTGAGTATGACGGTTTTTTTGTGCAACAGAGTTATATTTACTTACGTTCTCTGAACTTCTGTGAAGCCTTGCAGAACCTTTTGGTGAATTGGAGAAATCATATGAACAGTTTATACAACGGATGAAACGGCACATGAATAAGAGACTTCAGGTTACTTCTCCAACTCTATTCTTAAACTTTTAACAGTTCTACACTTAAGGAACCAAAGTCCTTTACTGTTTTACTCACTATTTGATACAGTGTGGGGAGAGGAGAACTAAGAGACCTTTGTCAATTTCTTTCACTACTGGCCCAACTTGCAGCTCTGGGGAGAATAAAGAAAATTTATGCAAGGTTAATGGAAATTCTGAAGTACCCTTGATCAAGAAATCTTCCTTTAAGAAACAGCCTGTCAATTCTAGGAGCATATTAACCGATTGTCCACAAAATATGGTAAAGAAAGGTGCTGAAAGCAAGTTATACAGAGATGATTCTGTTGTGACCAAGTTCGTGGATTCTGCAATTGTTGGAAGATCTGAAACAGAAGATGCCTGTCATCATGGCCTCGTAGAACCTACCATAAACATGAAAGAGGCCATGAATGCAATAAATAGCATGTTTAAAGAACCTATTGAGACTGCAAATGCTGTTCGAAGAACACATAGAGAGAAACCCAAGGTAGATCAAAGCAGAAGCACTGTACTTGAGGTGTTTATTGATGATGATAATCAAGATAATGTAGTTAGATCAAGTAATCAAAACGACAAGGAAAATTTTCAAGTGCCACAAAATAAAACAGAGCAGCCTCCCCAAGAACCATTCAAGATATTTGTTGATGATGAGTCAAACAATGATTCGGAACCAAGTGAGTCTCAAACATTAACAGATGGTTCCCCATCATCTTCTTCAAGAGTCGATGCATTTGTGTTTTTAAGGCCTCGAGATCACCTATCAGGGTCTTCCAATGAGATGAAAGTGGAGAAATCATCTAGAAAAACCAGAACCAAATTTAGGGAGGACACAGTTGTTCATAGATTTGTTGGTTCAGCTATTCTAGATGATCCAGAGGTGGAAAATATCTGCCACCACGGGTTGGTGGAACCAACCGTTAACCTTAAAGAAGCTATGGAAGATATCAATGGCATGTTTGGGAAGCCAATAGATTTTGTCAGGACCACCAGAAGGAAAAGACAGGCACAAGCAACAGCTGCCTCAGGTAAAAATGATTTTGGTGGGTTTTCAATACTTGCAGATGATGAATTTAATACTTCGGAAGGTCCACAACTACCTCCACAAAAGTTTTCAAGCAAAAATAACCACGATTTACAACATGAACCAACGATCTTTACAAGAGAAGCTATGGATGATATAAATAACCTCTTCAAAATGCCTCTGGATTTTTAGGCATGCTTCATTTTAGGGGTTAATATTTTGTTGTTGTATTGGACACCCTCTGGTGCCGCCTTCCTCAAACGGTCAAATTTGAAATCAATGGATTGATATTCTATTCTACTCTTTTGTTCATTACTTTGTTTTATAAACAAATATTAATTGGTTTTTTTGGATCATCAGAAATTTATGAAGGCATATTTAAGCTATCCCGATGGCCACAAAAGCACTCAACGGCTAGGCGCCGCTCATCAAAATTTAAATTTTCACTTTCCTCTTCTTCGTCACTCACTTCCCCCCCTCCCCCCTCCACAAGCTCTGCAATTTCACAAAAATGGCGAGCACAAATCACAACGATCTCTTCACATCTCTAATCTCCGAAATCAAATCTTACTCCGGCAACGACCCTCTTTTTCCATGGCTCAGCGGAGTTCGAAAAATGAAAGAAACTTTACCACACCACCTCCTCAAAGAGAAGCTCCCTCGATTCCTTCAGAAATGCGCCAAGACTTTCGATTCCGATCGCCGCTACCGCAATGACCTCCGATACCTCCGCATTTGGTTGCAATTGATGGATTATGTAGATGATCCGAAAGCGTTGTTGCGGACTATGGAGACGAAGAAGATTGGGAAGAAGCGGTGTCTATTTTATCAGGCGTATGCGCTTTATTATGAGAAGATTAAAAAATTTGATGATGCTGAAAAAATGTATCTTTTGGGGGTTCAAAACCTTGCAGAACCTTTTGGTGAATTGGAGAAATCATATGAACAGTTTATACAACGGATGAAACGGCACATGAATAAGAGACTTCAGTGTGGGGAGAGGAGAACTAAGAGACCTTTGTCAATTTCTTTCACTACTGGCCCAACTTGCAGCTCTGGGGAGAATAAAGAAAATTTATGCAAGGTTAATGGAAATTCTGAAGTACCCTTGATCAAGAAATCTTCCTTTAAGAAACAGCCTGTCAATTCTAGGAGCATATTAACCGATTGTCCACAAAATATGGTAAAGAAAGGTGCTGAAAGCAAGTTATACAGAGATGATTCTGTTGTGACCAAGTTCGTGGATTCTGCAATTGTTGGAAGATCTGAAACAGAAGATGCCTGTCATCATGGCCTCGTAGAACCTACCATAAACATGAAAGAGGCCATGAATGCAATAAATAGCATGTTTAAAGAACCTATTGAGACTGCAAATGCTGTTCGAAGAACACATAGAGAGAAACCCAAGGTAGATCAAAGCAGAAGCACTGTACTTGAGGTGTTTATTGATGATGATAATCAAGATAATGTAGTTAGATCAAGTAATCAAAACGACAAGGAAAATTTTCAAGTGCCACAAAATAAAACAGAGCAGCCTCCCCAAGAACCATTCAAGATATTTGTTGATGATGAGTCAAACAATGATTCGGAACCAAGTGAGTCTCAAACATTAACAGATGGTTCCCCATCATCTTCTTCAAGAGTCGATGCATTTGTGTTTTTAAGGCCTCGAGATCACCTATCAGGGTCTTCCAATGAGATGAAAGTGGAGAAATCATCTAGAAAAACCAGAACCAAATTTAGGGAGGACACAGTTGTTCATAGATTTGTTGGTTCAGCTATTCTAGATGATCCAGAGGTGGAAAATATCTGCCACCACGGGTTGGTGGAACCAACCGTTAACCTTAAAGAAGCTATGGAAGATATCAATGGCATGTTTGGGAAGCCAATAGATTTTGTCAGGACCACCAGAAGGAAAAGACAGGCACAAGCAACAGCTGCCTCAGGTAAAAATGATTTTGGTGGGTTTTCAATACTTGCAGATGATGAATTTAATACTTCGGAAGGTCCACAACTACCTCCACAAAAGTTTTCAAGCAAAAATAACCACGATTTACAACATGAACCAACGATCTTTACAAGAGAAGCTATGGATGATATAAATAACCTCTTCAAAATGCCTCTGGATTTTTAGGCATGCTTCATTTTAGGGGTTAATATTTTGTTGTTGTATTGGACACCCTCTGGTGCCGCCTTCCTCAAACGGTCAAATTTGAAATCAATGGATTGATATTCTATTCTACTCTTTTGTTCATTACTTTGTTTTATAAACAAATATTAATTGGTTTTTTTGGATCATCAGAAATTTATGAAGGCA ATGGCGAGCACAAATCACAACGATCTCTTCACATCTCTAATCTCCGAAATCAAATCTTACTCCGGCAACGACCCTCTTTTTCCATGGCTCAGCGGAGTTCGAAAAATGAAAGAAACTTTACCACACCACCTCCTCAAAGAGAAGCTCCCTCGATTCCTTCAGAAATGCGCCAAGACTTTCGATTCCGATCGCCGCTACCGCAATGACCTCCGATACCTCCGCATTTGGTTGCAATTGATGGATTATGTAGATGATCCGAAAGCGTTGTTGCGGACTATGGAGACGAAGAAGATTGGGAAGAAGCGGTGTCTATTTTATCAGGCGTATGCGCTTTATTATGAGAAGATTAAAAAATTTGATGATGCTGAAAAAATGTATCTTTTGGGGGTTCAAAACCTTGCAGAACCTTTTGGTGAATTGGAGAAATCATATGAACAGTTTATACAACGGATGAAACGGCACATGAATAAGAGACTTCAGTGTGGGGAGAGGAGAACTAAGAGACCTTTGTCAATTTCTTTCACTACTGGCCCAACTTGCAGCTCTGGGGAGAATAAAGAAAATTTATGCAAGGTTAATGGAAATTCTGAAGTACCCTTGATCAAGAAATCTTCCTTTAAGAAACAGCCTGTCAATTCTAGGAGCATATTAACCGATTGTCCACAAAATATGGTAAAGAAAGGTGCTGAAAGCAAGTTATACAGAGATGATTCTGTTGTGACCAAGTTCGTGGATTCTGCAATTGTTGGAAGATCTGAAACAGAAGATGCCTGTCATCATGGCCTCGTAGAACCTACCATAAACATGAAAGAGGCCATGAATGCAATAAATAGCATGTTTAAAGAACCTATTGAGACTGCAAATGCTGTTCGAAGAACACATAGAGAGAAACCCAAGGTAGATCAAAGCAGAAGCACTGTACTTGAGGTGTTTATTGATGATGATAATCAAGATAATGTAGTTAGATCAAGTAATCAAAACGACAAGGAAAATTTTCAAGTGCCACAAAATAAAACAGAGCAGCCTCCCCAAGAACCATTCAAGATATTTGTTGATGATGAGTCAAACAATGATTCGGAACCAAGTGAGTCTCAAACATTAACAGATGGTTCCCCATCATCTTCTTCAAGAGTCGATGCATTTGTGTTTTTAAGGCCTCGAGATCACCTATCAGGGTCTTCCAATGAGATGAAAGTGGAGAAATCATCTAGAAAAACCAGAACCAAATTTAGGGAGGACACAGTTGTTCATAGATTTGTTGGTTCAGCTATTCTAGATGATCCAGAGGTGGAAAATATCTGCCACCACGGGTTGGTGGAACCAACCGTTAACCTTAAAGAAGCTATGGAAGATATCAATGGCATGTTTGGGAAGCCAATAGATTTTGTCAGGACCACCAGAAGGAAAAGACAGGCACAAGCAACAGCTGCCTCAGGTAAAAATGATTTTGGTGGGTTTTCAATACTTGCAGATGATGAATTTAATACTTCGGAAGGTCCACAACTACCTCCACAAAAGTTTTCAAGCAAAAATAACCACGATTTACAACATGAACCAACGATCTTTACAAGAGAAGCTATGGATGATATAAATAACCTCTTCAAAATGCCTCTGGATTTTTAG MASTNHNDLFTSLISEIKSYSGNDPLFPWLSGVRKMKETLPHHLLKEKLPRFLQKCAKTFDSDRRYRNDLRYLRIWLQLMDYVDDPKALLRTMETKKIGKKRCLFYQAYALYYEKIKKFDDAEKMYLLGVQNLAEPFGELEKSYEQFIQRMKRHMNKRLQCGERRTKRPLSISFTTGPTCSSGENKENLCKVNGNSEVPLIKKSSFKKQPVNSRSILTDCPQNMVKKGAESKLYRDDSVVTKFVDSAIVGRSETEDACHHGLVEPTINMKEAMNAINSMFKEPIETANAVRRTHREKPKVDQSRSTVLEVFIDDDNQDNVVRSSNQNDKENFQVPQNKTEQPPQEPFKIFVDDESNNDSEPSESQTLTDGSPSSSSRVDAFVFLRPRDHLSGSSNEMKVEKSSRKTRTKFREDTVVHRFVGSAILDDPEVENICHHGLVEPTVNLKEAMEDINGMFGKPIDFVRTTRRKRQAQATAASGKNDFGGFSILADDEFNTSEGPQLPPQKFSSKNNHDLQHEPTIFTREAMDDINNLFKMPLDF Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo09133.1 vs. NCBI nr
Match: gi|902228109|gb|KNA20971.1| (hypothetical protein SOVF_047150 [Spinacia oleracea]) HSP 1 Score: 1070.5 bits (2767), Expect = 1.000e-309 Identity = 539/540 (99.81%), Postives = 540/540 (100.00%), Query Frame = 1
BLAST of Spo09133.1 vs. NCBI nr
Match: gi|731362785|ref|XP_010693072.1| (PREDICTED: probable inactive serine/threonine-protein kinase bub1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 798.5 bits (2061), Expect = 7.200e-228 Identity = 419/545 (76.88%), Postives = 472/545 (86.61%), Query Frame = 1
BLAST of Spo09133.1 vs. NCBI nr
Match: gi|223532283|gb|EEF34086.1| (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 538.5 bits (1386), Expect = 1.300e-149 Identity = 306/564 (54.26%), Postives = 383/564 (67.91%), Query Frame = 1
BLAST of Spo09133.1 vs. NCBI nr
Match: gi|1000948254|ref|XP_002528328.2| (PREDICTED: probable inactive serine/threonine-protein kinase bub1 [Ricinus communis]) HSP 1 Score: 538.5 bits (1386), Expect = 1.300e-149 Identity = 306/564 (54.26%), Postives = 383/564 (67.91%), Query Frame = 1
BLAST of Spo09133.1 vs. NCBI nr
Match: gi|571490089|ref|XP_006591389.1| (PREDICTED: probable inactive serine/threonine-protein kinase bub1 [Glycine max]) HSP 1 Score: 534.3 bits (1375), Expect = 2.500e-148 Identity = 291/539 (53.99%), Postives = 369/539 (68.46%), Query Frame = 1
BLAST of Spo09133.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RN70_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_047150 PE=4 SV=1) HSP 1 Score: 1070.5 bits (2767), Expect = 7.000e-310 Identity = 539/540 (99.81%), Postives = 540/540 (100.00%), Query Frame = 1
BLAST of Spo09133.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BH58_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g045710 PE=4 SV=1) HSP 1 Score: 798.5 bits (2061), Expect = 5.000e-228 Identity = 419/545 (76.88%), Postives = 472/545 (86.61%), Query Frame = 1
BLAST of Spo09133.1 vs. UniProtKB/TrEMBL
Match: B9SQQ9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0839760 PE=4 SV=1) HSP 1 Score: 538.5 bits (1386), Expect = 9.300e-150 Identity = 306/564 (54.26%), Postives = 383/564 (67.91%), Query Frame = 1
BLAST of Spo09133.1 vs. UniProtKB/TrEMBL
Match: K7LRS1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G232000 PE=4 SV=1) HSP 1 Score: 534.3 bits (1375), Expect = 1.800e-148 Identity = 291/539 (53.99%), Postives = 369/539 (68.46%), Query Frame = 1
BLAST of Spo09133.1 vs. UniProtKB/TrEMBL
Match: A0A0B2PAT2_GLYSO (Putative inactive serine/threonine-protein kinase bub1 OS=Glycine soja GN=glysoja_031878 PE=4 SV=1) HSP 1 Score: 532.7 bits (1371), Expect = 5.100e-148 Identity = 290/540 (53.70%), Postives = 369/540 (68.33%), Query Frame = 1
BLAST of Spo09133.1 vs. ExPASy Swiss-Prot
Match: BUBR1_ARATH (Mitotic spindle checkpoint protein BUBR1 OS=Arabidopsis thaliana GN=BUBR1 PE=1 SV=2) HSP 1 Score: 95.5 bits (236), Expect = 1.900e-18 Identity = 57/200 (28.50%), Postives = 101/200 (50.50%), Query Frame = 1
BLAST of Spo09133.1 vs. ExPASy Swiss-Prot
Match: BUB1_DICDI (Probable inactive serine/threonine-protein kinase bub1 OS=Dictyostelium discoideum GN=bub1 PE=3 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.200e-17 Identity = 45/144 (31.25%), Postives = 80/144 (55.56%), Query Frame = 1
BLAST of Spo09133.1 vs. ExPASy Swiss-Prot
Match: MAD3_SCHPO (Mitotic spindle checkpoint component mad3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mad3 PE=1 SV=2) HSP 1 Score: 87.8 bits (216), Expect = 3.900e-16 Identity = 44/133 (33.08%), Postives = 75/133 (56.39%), Query Frame = 1
BLAST of Spo09133.1 vs. ExPASy Swiss-Prot
Match: BUB1_ARATH (Mitotic checkpoint serine/threonine-protein kinase BUB1 OS=Arabidopsis thaliana GN=BUB1 PE=1 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 9.700e-15 Identity = 46/136 (33.82%), Postives = 74/136 (54.41%), Query Frame = 1
BLAST of Spo09133.1 vs. ExPASy Swiss-Prot
Match: BUB1B_HUMAN (Mitotic checkpoint serine/threonine-protein kinase BUB1 beta OS=Homo sapiens GN=BUB1B PE=1 SV=3) HSP 1 Score: 76.3 bits (186), Expect = 1.200e-12 Identity = 52/209 (24.88%), Postives = 90/209 (43.06%), Query Frame = 1
BLAST of Spo09133.1 vs. TAIR (Arabidopsis)
Match: AT5G05510.1 (Mad3/BUB1 homology region 1) HSP 1 Score: 248.4 bits (633), Expect = 9.800e-66 Identity = 152/309 (49.19%), Postives = 193/309 (62.46%), Query Frame = 1
BLAST of Spo09133.1 vs. TAIR (Arabidopsis)
Match: AT2G33560.2 (BUB1-related (BUB1: budding uninhibited by benzymidazol 1)) HSP 1 Score: 96.7 bits (239), Expect = 4.800e-20 Identity = 58/200 (29.00%), Postives = 101/200 (50.50%), Query Frame = 1
BLAST of Spo09133.1 vs. TAIR (Arabidopsis)
Match: AT2G20635.1 (ATP binding;protein kinases;protein serine/threonine kinases) HSP 1 Score: 83.2 bits (204), Expect = 5.400e-16 Identity = 46/136 (33.82%), Postives = 74/136 (54.41%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo09133.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo09133.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo09133.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo09133.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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