Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTCCCTCCACAGTTGCATGCCAGACGCATGGACATACACAAACACAATACATAATTCTAAATTATTTGAGAATATTAATTAATGGGTCGTCCTTTCTCTCCCTATATAAACACCCCCCATTCGTTCTCACTTACATACAAGTGTTCCTTTCTACCTATTAAGCTTCTCTCACTCTCCAAAATTCTTGGCAAAAAAAATAAAAAAAATAAGAAATTAAAAAGAAATCGATTTGTAGCTTATTCAATTCAATCAAATACTAATATTATTGAAGCCATGTTTACCGTCCACCACCCTTGGGTTTTTGCTTTTGGTCTACTAGGTATCCCCTTCCTCCGCTACATAAAGTTCCTCGCTTTTACTATCCAGGTGATCAAAGTATTTAAACTTTGACACCATGTATATCATATCGCTTCTTTTTGTTTCCTTTACTTTTTATTGATTTTTCGAGCAAAATATATACTCCGTATATGTTTATAGTTAAAGTTGAGAATAATGGTTTGCCATATTTTTCTAGCTCCACTTTACAAGAATTTTTTTTGTTGAAACAAAGCAAGATTGTATTATCGGTTTTGGGAACTTCTATACACTTACATTCTTGTCATGTTCTGCCCCATTTTCTCAAATTTCATAATTAAACATCATATATGCACACACATCATTTATGTTTTTTTTTTCCACTCTAATCCTTTTTAAGTAAAAATTTTAACAATTTGTACTCCACTATTTTTCTTCTAAGAAATAGGGTTCCCCCCCCCCCCCCCCCCCNTTTTCTAATCACCCATTTACCCGTTTCTTTTCTTTTTCCATTTCTTCTCTCTTATTTTCGGCATATTTTAATTTTCTTTCAAATATTTATCGTTTTTGTTTCGTACTAAGCAACATATACTGATTCTGTACAAAAAAAGTAGGTTAGGATAGTAGCTGCTTTAACATTCCAAATTAAAGTATTTAACAAGGTTATCAATTTAAAAACGATTTTCTTGTGAATTCCTAGAATAAATAAATAACTTAAATTAATTATGTTATCCTACATAGTATTTTCTTAACAAATCTCACTTATCTTTATGAACATTATTCACCTGAAAATGGCTTTTTTCTACCGAAGTATCATTTTAGTTTAGTCAATCATTTAACTTTGGAAAAAGACTAATCAATTTTGTCACCTTGTGTGATTCATTGTTATTGCAGGCAACGTCATCTCCTTCATGGTGTTTCTTGCACCACTGTAAGTACTATATTAATCACACTTTTTTCGACTAATCAATCAATTAATCACCCGCTTTTTTCGCCTTTTTTACGATTAATTTACTCGGTTCGACATATATTAAGATCTAATTAAAATGAATATATATATATCTTCGATTTTACAGGCCAACTTTTATTAGGGTGTACAAGAAAAAATCAACAGAAGGATTTCAATCACTTCCTTACGTAGTTGCCATCTTTAGTGCGATGCTATGGATCTACTACGCTTTGCTCAAGGGCAATTCTGTCCTTTTAATCACTATCAATGTTGCTGGAGTTATTATTGAGACCATTTACGTTGCCATATACATTACCTATGCCCCAAGGCAACCAAGGGTACGTACTATACCTAATTTTATTATTATCCAATTATTGTTCCATCATCCACAGTTACACATGATCACGACCTGATTTTTACCTTACAAATTCTTAAGTAATTCTTATGTGAGACAATTAAATTTTTACTACTCCCTCTGTACCTTAATACTCGAACTGTTTTGACCGGACACGCTTGCCAATGCACAACTTTGACCACCGATTTCTTTAACTATATATTATAAAAACTTATAAAAATACTAATATTTTGAAAATACATATTAAGATGAAGCCAACAATATATTATATACTAACATTTGTTTTCATATACTATAAATAAAATAGGGTCAACGTGAATTATGTAAATAGTGCAAAAAGTCAAAACAGGTCGAGTATTAAGGAACGGAGGGAGTACAATAAAAGATAAATTTGAGATTTCCGTCTCCTAAAAAAAAGCAGAACTTTTATAAAAAAAAAAAAAAAAAATCTCAAGATATATATGGTATACGCCCGTTAACATGGTTACACTCGGTTTTGCAGATATCAACTTTGAAGTTACTTTTGTTGATGGATTTTTGTGGGTTTGGCGCGATTGTATTGTTTTGCCATTACTTATTTCATGGGGAAATTCGGCTTCAAGTTTACGGATGGATTTGTGTAGTAATCTCTATTAGTGTTTTTGCAGCACCCCTTAGTGTAATGGTACGTACACTAGCTGTATTAGTTTTCATTCTTACAATTATAATTTTGGACGTGAGTTAGTTACTACGTAGTAATTATTATTGTCTAAACTTTAAACCTTTAACAGAGGACGGTGGTTCGGACCAAGAGCGTGGAGTACATGCCGGTTAACTTGTCATTTTGTCTCTTACTAACAGCAACTGTATGGTTCTTTTACGGGTTCGTCCAGAAAGATATGTACATCGCAGTAAGTCATACTCATATATAAATTATTTTTAAGATATACTCGTTCAGTGCATATATTTATATATCTCTTTTTGTTTTTCATATTTCGAATTTATTTAGTGAGAAAAAAAAAAGTTAAAGTAAGAAGAACAAATAGTAGGAAAGAAGTATATTTTTTATGTTATATGCTAACTAACTAATTAATGATGTTATGAAATTATTTGCAGCTTCCAAATGTTGTGGGGTTCTTATTAGGAGTGGCACAAATGGTAATCTATGCAATTTACAGGAAACATGACAAACAAGCAAAAAAACAGAAGCTACCAGAATTTGCAAGTCCAATTAAGCAAGAAATAGTTGAAATTCAATCAATTCCCAACAAAACTGAGGATGTTATTCCTCCACATGAAGAGCCTCTAGAAATTGAGGTTGTAATTGGAAACAAAGATAATACTATTGTTGGTGGTGATGATGAGGAGGTTGTTGGTGATTTATATGGGCCGCCGCAAGGCCCGGCAGTATGCAGCGTGGACGCCGAGAAGATTTCCGGTGGGCCCGCCGGCCCGGCTTCGGTGCAATTGGTTCAGTGTGCCGTTTGAGTTAGGGCAATTGAATTGGTAGCTAAACCTTTTGGGTTTCTTACTCTTTTAACCTCCTAATTTGCCCATCCCTTCAAAATAAAAGAGTAATTAGATTTTGTAGAGTTAATGTAAATTAATTTGGAAGGCCTTTAGTGGAGTCCACTTTTGGTGAATGAAGGGCACCTTAAGCTTGATTGGAGAGTCACATTCCCTAATGTCCCCTCTTGTTATATAACCCCAAAGGCACCCCAATTATTGTACTATTGTCTACTTCATCAATTAATTGAGTTTTTGGCTCTAATTGAAAAACTCATCACAATTGTTTGGTTATCTTATTTCTTGTATGGGTTTGTTTCCCTTTGATTGAATGGTTAAATAGGTTTCAAAAGATGATAAGAATGACTACAAAAATGAAGCCAATTTGTTAAATGAGGCAATGCCAATCCCTTTATTGTACTAAGAAGCTTTAATAAAATTTTACAAAGTTATTTGTTTTATGTTTGTTTAATTTACAA CCTCCCTCCACAGTTGCATGCCAGACGCATGGACATACACAAACACAATACATAATTCTAAATTATTTGAGAATATTAATTAATGGGTCGTCCTTTCTCTCCCTATATAAACACCCCCCATTCGTTCTCACTTACATACAAGTGTTCCTTTCTACCTATTAAGCTTCTCTCACTCTCCAAAATTCTTGGCAAAAAAAATAAAAAAAATAAGAAATTAAAAAGAAATCGATTTGTAGCTTATTCAATTCAATCAAATACTAATATTATTGAAGCCATGTTTACCGTCCACCACCCTTGGGTTTTTGCTTTTGGTCTACTAGGCAACGTCATCTCCTTCATGGTGTTTCTTGCACCACTGCCAACTTTTATTAGGGTGTACAAGAAAAAATCAACAGAAGGATTTCAATCACTTCCTTACGTAGTTGCCATCTTTAGTGCGATGCTATGGATCTACTACGCTTTGCTCAAGGGCAATTCTGTCCTTTTAATCACTATCAATGTTGCTGGAGTTATTATTGAGACCATTTACGTTGCCATATACATTACCTATGCCCCAAGGCAACCAAGGATATCAACTTTGAAGTTACTTTTGTTGATGGATTTTTGTGGGTTTGGCGCGATTGTATTGTTTTGCCATTACTTATTTCATGGGGAAATTCGGCTTCAAGTTTACGGATGGATTTGTGTAGTAATCTCTATTAGTGTTTTTGCAGCACCCCTTAGTGTAATGAGGACGGTGGTTCGGACCAAGAGCGTGGAGTACATGCCGGTTAACTTGTCATTTTGTCTCTTACTAACAGCAACTGTATGGTTCTTTTACGGGTTCGTCCAGAAAGATATGTACATCGCACTTCCAAATGTTGTGGGGTTCTTATTAGGAGTGGCACAAATGGTAATCTATGCAATTTACAGGAAACATGACAAACAAGCAAAAAAACAGAAGCTACCAGAATTTGCAAGTCCAATTAAGCAAGAAATAGTTGAAATTCAATCAATTCCCAACAAAACTGAGGATGTTATTCCTCCACATGAAGAGCCTCTAGAAATTGAGGTTGTAATTGGAAACAAAGATAATACTATTGTTGGTGGTGATGATGAGGAGGTTGTTGGTGATTTATATGGGCCGCCGCAAGGCCCGGCAGTATGCAGCGTGGACGCCGAGAAGATTTCCGGTGGGCCCGCCGGCCCGGCTTCGGTGCAATTGGTTCAGTGTGCCGTTTGAGTTAGGGCAATTGAATTGGTAGCTAAACCTTTTGGGTTTCTTACTCTTTTAACCTCCTAATTTGCCCATCCCTTCAAAATAAAAGAGTAATTAGATTTTGTAGAGTTAATGTAAATTAATTTGGAAGGCCTTTAGTGGAGTCCACTTTTGGTGAATGAAGGGCACCTTAAGCTTGATTGGAGAGTCACATTCCCTAATGTCCCCTCTTGTTATATAACCCCAAAGGCACCCCAATTATTGTACTATTGTCTACTTCATCAATTAATTGAGTTTTTGGCTCTAATTGAAAAACTCATCACAATTGTTTGGTTATCTTATTTCTTGTATGGGTTTGTTTCCCTTTGATTGAATGGTTAAATAGGTTTCAAAAGATGATAAGAATGACTACAAAAATGAAGCCAATTTGTTAAATGAGGCAATGCCAATCCCTTTATTGTACTAAGAAGCTTTAATAAAATTTTACAAAGTTATTTGTTTTATGTTTGTTTAATTTACAA ATGGGTCGTCCTTTCTCTCCCTATATAAACACCCCCCATTCGTTCTCACTTACATACAAGTGTTCCTTTCTACCTATTAAGCTTCTCTCACTCTCCAAAATTCTTGGCAAAAAAAATAAAAAAAATAAGAAATTAAAAAGAAATCGATTTGTAGCTTATTCAATTCAATCAAATACTAATATTATTGAAGCCATGTTTACCGTCCACCACCCTTGGGTTTTTGCTTTTGGTCTACTAGGCAACGTCATCTCCTTCATGGTGTTTCTTGCACCACTGCCAACTTTTATTAGGGTGTACAAGAAAAAATCAACAGAAGGATTTCAATCACTTCCTTACGTAGTTGCCATCTTTAGTGCGATGCTATGGATCTACTACGCTTTGCTCAAGGGCAATTCTGTCCTTTTAATCACTATCAATGTTGCTGGAGTTATTATTGAGACCATTTACGTTGCCATATACATTACCTATGCCCCAAGGCAACCAAGGATATCAACTTTGAAGTTACTTTTGTTGATGGATTTTTGTGGGTTTGGCGCGATTGTATTGTTTTGCCATTACTTATTTCATGGGGAAATTCGGCTTCAAGTTTACGGATGGATTTGTGTAGTAATCTCTATTAGTGTTTTTGCAGCACCCCTTAGTGTAATGAGGACGGTGGTTCGGACCAAGAGCGTGGAGTACATGCCGGTTAACTTGTCATTTTGTCTCTTACTAACAGCAACTGTATGGTTCTTTTACGGGTTCGTCCAGAAAGATATGTACATCGCACTTCCAAATGTTGTGGGGTTCTTATTAGGAGTGGCACAAATGGTAATCTATGCAATTTACAGGAAACATGACAAACAAGCAAAAAAACAGAAGCTACCAGAATTTGCAAGTCCAATTAAGCAAGAAATAGTTGAAATTCAATCAATTCCCAACAAAACTGAGGATGTTATTCCTCCACATGAAGAGCCTCTAGAAATTGAGGTTGTAATTGGAAACAAAGATAATACTATTGTTGGTGGTGATGATGAGGAGGTTGTTGGTGATTTATATGGGCCGCCGCAAGGCCCGGCAGTATGCAGCGTGGACGCCGAGAAGATTTCCGGTGGGCCCGCCGGCCCGGCTTCGGTGCAATTGGTTCAGTGTGCCGTTTGA MGRPFSPYINTPHSFSLTYKCSFLPIKLLSLSKILGKKNKKNKKLKRNRFVAYSIQSNTNIIEAMFTVHHPWVFAFGLLGNVISFMVFLAPLPTFIRVYKKKSTEGFQSLPYVVAIFSAMLWIYYALLKGNSVLLITINVAGVIIETIYVAIYITYAPRQPRISTLKLLLLMDFCGFGAIVLFCHYLFHGEIRLQVYGWICVVISISVFAAPLSVMRTVVRTKSVEYMPVNLSFCLLLTATVWFFYGFVQKDMYIALPNVVGFLLGVAQMVIYAIYRKHDKQAKKQKLPEFASPIKQEIVEIQSIPNKTEDVIPPHEEPLEIEVVIGNKDNTIVGGDDEEVVGDLYGPPQGPAVCSVDAEKISGGPAGPASVQLVQCAV Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo08933.1 vs. NCBI nr
Match: gi|902222072|gb|KNA19087.1| (hypothetical protein SOVF_064870 [Spinacia oleracea]) HSP 1 Score: 613.2 bits (1580), Expect = 3.000e-172 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 1
BLAST of Spo08933.1 vs. NCBI nr
Match: gi|731334570|ref|XP_010678288.1| (PREDICTED: bidirectional sugar transporter N3 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 472.6 bits (1215), Expect = 6.300e-130 Identity = 254/328 (77.44%), Postives = 280/328 (85.37%), Query Frame = 1
BLAST of Spo08933.1 vs. NCBI nr
Match: gi|559148720|gb|AHB08882.1| (bidirectional sugar transporter SWEET14-like protein [Suaeda glauca]) HSP 1 Score: 430.6 bits (1106), Expect = 2.800e-117 Identity = 231/328 (70.43%), Postives = 271/328 (82.62%), Query Frame = 1
BLAST of Spo08933.1 vs. NCBI nr
Match: gi|567888758|ref|XP_006436901.1| (hypothetical protein CICLE_v10032313mg [Citrus clementina]) HSP 1 Score: 293.1 bits (749), Expect = 6.900e-76 Identity = 149/250 (59.60%), Postives = 191/250 (76.40%), Query Frame = 1
BLAST of Spo08933.1 vs. NCBI nr
Match: gi|778658199|ref|XP_004145146.2| (PREDICTED: bidirectional sugar transporter SWEET12-like [Cucumis sativus]) HSP 1 Score: 288.1 bits (736), Expect = 2.200e-74 Identity = 151/269 (56.13%), Postives = 198/269 (73.61%), Query Frame = 1
BLAST of Spo08933.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RJN8_SPIOL (Bidirectional sugar transporter SWEET OS=Spinacia oleracea GN=SOVF_064870 PE=3 SV=1) HSP 1 Score: 613.2 bits (1580), Expect = 2.100e-172 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 1
BLAST of Spo08933.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CG15_BETVU (Bidirectional sugar transporter SWEET OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g112910 PE=3 SV=1) HSP 1 Score: 472.6 bits (1215), Expect = 4.400e-130 Identity = 254/328 (77.44%), Postives = 280/328 (85.37%), Query Frame = 1
BLAST of Spo08933.1 vs. UniProtKB/TrEMBL
Match: V5Q0U0_9CARY (Bidirectional sugar transporter SWEET OS=Suaeda glauca PE=2 SV=1) HSP 1 Score: 430.6 bits (1106), Expect = 1.900e-117 Identity = 231/328 (70.43%), Postives = 271/328 (82.62%), Query Frame = 1
BLAST of Spo08933.1 vs. UniProtKB/TrEMBL
Match: V4TK53_9ROSI (Bidirectional sugar transporter SWEET OS=Citrus clementina GN=CICLE_v10032313mg PE=3 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 4.800e-76 Identity = 149/250 (59.60%), Postives = 191/250 (76.40%), Query Frame = 1
BLAST of Spo08933.1 vs. UniProtKB/TrEMBL
Match: A0A0A0LTX7_CUCSA (Bidirectional sugar transporter SWEET OS=Cucumis sativus GN=Csa_1G051720 PE=3 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 1.500e-74 Identity = 151/269 (56.13%), Postives = 198/269 (73.61%), Query Frame = 1
BLAST of Spo08933.1 vs. ExPASy Swiss-Prot
Match: SWT14_ORYSJ (Bidirectional sugar transporter SWEET14 OS=Oryza sativa subsp. japonica GN=SWEET14 PE=2 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 3.900e-71 Identity = 144/270 (53.33%), Postives = 189/270 (70.00%), Query Frame = 1
BLAST of Spo08933.1 vs. ExPASy Swiss-Prot
Match: SWT14_ORYSI (Bidirectional sugar transporter SWEET14 OS=Oryza sativa subsp. indica GN=SWEET14 PE=2 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 3.900e-71 Identity = 144/270 (53.33%), Postives = 189/270 (70.00%), Query Frame = 1
BLAST of Spo08933.1 vs. ExPASy Swiss-Prot
Match: NOD3_MEDTR (Bidirectional sugar transporter N3 OS=Medicago truncatula GN=N3 PE=2 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 2.100e-69 Identity = 141/261 (54.02%), Postives = 189/261 (72.41%), Query Frame = 1
BLAST of Spo08933.1 vs. ExPASy Swiss-Prot
Match: SWT13_ORYSJ (Bidirectional sugar transporter SWEET13 OS=Oryza sativa subsp. japonica GN=SWEET13 PE=2 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 1.200e-67 Identity = 124/213 (58.22%), Postives = 163/213 (76.53%), Query Frame = 1
BLAST of Spo08933.1 vs. ExPASy Swiss-Prot
Match: SWT15_ORYSJ (Bidirectional sugar transporter SWEET15 OS=Oryza sativa subsp. japonica GN=SWEET15 PE=2 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 2.900e-66 Identity = 130/241 (53.94%), Postives = 178/241 (73.86%), Query Frame = 1
BLAST of Spo08933.1 vs. TAIR (Arabidopsis)
Match: AT5G23660.1 (homolog of Medicago truncatula MTN3) HSP 1 Score: 253.1 bits (645), Expect = 2.800e-67 Identity = 126/234 (53.85%), Postives = 172/234 (73.50%), Query Frame = 1
BLAST of Spo08933.1 vs. TAIR (Arabidopsis)
Match: AT3G48740.1 (Nodulin MtN3 family protein) HSP 1 Score: 251.1 bits (640), Expect = 1.100e-66 Identity = 123/234 (52.56%), Postives = 171/234 (73.08%), Query Frame = 1
BLAST of Spo08933.1 vs. TAIR (Arabidopsis)
Match: AT5G50800.1 (Nodulin MtN3 family protein) HSP 1 Score: 250.8 bits (639), Expect = 1.400e-66 Identity = 128/214 (59.81%), Postives = 164/214 (76.64%), Query Frame = 1
BLAST of Spo08933.1 vs. TAIR (Arabidopsis)
Match: AT4G25010.1 (Nodulin MtN3 family protein) HSP 1 Score: 243.0 bits (619), Expect = 2.900e-64 Identity = 134/258 (51.94%), Postives = 173/258 (67.05%), Query Frame = 1
BLAST of Spo08933.1 vs. TAIR (Arabidopsis)
Match: AT5G13170.1 (senescence-associated gene 29) HSP 1 Score: 238.0 bits (606), Expect = 9.300e-63 Identity = 124/253 (49.01%), Postives = 176/253 (69.57%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo08933.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo08933.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo08933.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo08933.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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